Miyakogusa Predicted Gene
- Lj2g3v3088160.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3088160.1 tr|B9GFL3|B9GFL3_POPTR Outward rectifying
potassium channel (Fragment) OS=Populus trichocarpa
GN=POP,38.46,3e-19,Voltage-gated potassium channels,NULL; seg,NULL;
Ion_trans_2,Ion transport 2; PROBABLE CALCIUM-ACTIV,gene.g44177.t1.1
(150 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G18160.1 | Symbols: KCO6, ATTPK3, ATKCO6, TPK3 | Ca2+ activat... 138 1e-33
AT4G01840.1 | Symbols: KCO5, ATTPK5, ATKCO5, TPK5 | Ca2+ activat... 131 2e-31
AT5G46370.1 | Symbols: KCO2, ATTPK2, ATKCO2 | Ca2+ activated out... 125 8e-30
AT5G46360.2 | Symbols: KCO3 | Ca2+ activated outward rectifying ... 103 4e-23
AT5G46360.1 | Symbols: KCO3, ATKCO3 | Ca2+ activated outward rec... 103 4e-23
AT5G55630.2 | Symbols: KCO1, TPK1 | Outward rectifying potassium... 91 4e-19
AT5G55630.1 | Symbols: KCO1, TPK1, ATKCO1, ATTPK1 | Outward rect... 91 4e-19
AT1G02510.1 | Symbols: KCO4, ATKCO4, ATTPK4, TPK4 | Outward rect... 86 9e-18
>AT4G18160.1 | Symbols: KCO6, ATTPK3, ATKCO6, TPK3 | Ca2+ activated
outward rectifying K+ channel 6 | chr4:10055696-10057546
FORWARD LENGTH=436
Length = 436
Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 89/122 (72%)
Query: 1 MRIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGR 60
MRIR KV LAL VV+ +A+G HF+ ++ W DS YLSV SVTTVGYGD + T+ GR
Sbjct: 268 MRIRLKVALALGVVVLCIAVGVGIMHFIEEIGWLDSFYLSVMSVTTVGYGDRAFKTLPGR 327
Query: 61 CFASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRF 120
FA++WLLVSTLAVARA+LYLA+ + KRNRE AK +L + +++S AAD+DN+G +
Sbjct: 328 LFAAIWLLVSTLAVARAFLYLAEARVDKRNRERAKKVLCETMSVSQFFAADIDNNGCVSK 387
Query: 121 EE 122
E
Sbjct: 388 AE 389
>AT4G01840.1 | Symbols: KCO5, ATTPK5, ATKCO5, TPK5 | Ca2+ activated
outward rectifying K+ channel 5 | chr4:793403-794933
FORWARD LENGTH=408
Length = 408
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 1 MRIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGR 60
MRIR KVCLAL VV+ + +G + HFV +L + DS+YLSV SVTTVGYGD + T+ GR
Sbjct: 242 MRIRMKVCLALCVVVLCIGVGALVLHFVEELGFVDSVYLSVMSVTTVGYGDRAFKTLQGR 301
Query: 61 CFASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRF 120
FA++WLLVSTLAVARA+LYLA+ + +R+R+ K L ++IT+ DL+ AD G I
Sbjct: 302 LFAAVWLLVSTLAVARAFLYLAEARIDRRHRKAVKLALNREITVDDLLKADTYQHGFISK 361
Query: 121 EE 122
E
Sbjct: 362 SE 363
>AT5G46370.1 | Symbols: KCO2, ATTPK2, ATKCO2 | Ca2+ activated
outward rectifying K+ channel 2 | chr5:18809623-18811720
REVERSE LENGTH=443
Length = 443
Score = 125 bits (315), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 84/122 (68%)
Query: 1 MRIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGR 60
MRIR KV LAL VV+ + G + HFV + W DS Y SV SVTTVGYGD + T+AGR
Sbjct: 268 MRIRLKVGLALGVVVLCLGFGVLIMHFVEKIGWLDSFYFSVMSVTTVGYGDRAFNTLAGR 327
Query: 61 CFASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRF 120
A++WLLVSTLAVARA L+LA+ + KRNRE AK +L + +++S + AD+D +G +
Sbjct: 328 LLAAMWLLVSTLAVARAILFLAESRVDKRNRERAKKVLGESMSISQFLDADIDCNGCVSK 387
Query: 121 EE 122
E
Sbjct: 388 AE 389
>AT5G46360.2 | Symbols: KCO3 | Ca2+ activated outward rectifying K+
channel 3 | chr5:18806785-18808134 REVERSE LENGTH=260
Length = 260
Score = 103 bits (257), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 67/102 (65%)
Query: 21 GTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGRCFASLWLLVSTLAVARAYLY 80
G + HFV + W DS SV VTTVG+GD + T G A++WLLVSTLAVARA+L+
Sbjct: 113 GFLIVHFVVKIGWLDSFCFSVMMVTTVGFGDRAFNTWLGTFLAAVWLLVSTLAVARAFLF 172
Query: 81 LADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRFEE 122
LAD KRNRE AK +L + I++S AAD+DNDG + E
Sbjct: 173 LADARADKRNRERAKKVLGESISISQFFAADIDNDGRLSLAE 214
>AT5G46360.1 | Symbols: KCO3, ATKCO3 | Ca2+ activated outward
rectifying K+ channel 3 | chr5:18806858-18808134 REVERSE
LENGTH=260
Length = 260
Score = 103 bits (257), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 67/102 (65%)
Query: 21 GTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGRCFASLWLLVSTLAVARAYLY 80
G + HFV + W DS SV VTTVG+GD + T G A++WLLVSTLAVARA+L+
Sbjct: 113 GFLIVHFVVKIGWLDSFCFSVMMVTTVGFGDRAFNTWLGTFLAAVWLLVSTLAVARAFLF 172
Query: 81 LADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRFEE 122
LAD KRNRE AK +L + I++S AAD+DNDG + E
Sbjct: 173 LADARADKRNRERAKKVLGESISISQFFAADIDNDGRLSLAE 214
>AT5G55630.2 | Symbols: KCO1, TPK1 | Outward rectifying potassium
channel protein | chr5:22531718-22532893 FORWARD
LENGTH=363
Length = 363
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 69/111 (62%), Gaps = 3/111 (2%)
Query: 8 CLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGRCFASLWL 67
CL L V+ +GT+ V + + Y ++VTT+GYGD S + AGR FA W+
Sbjct: 201 CLVLVVLF---IVGTIFLVMVEKMPVISAFYCVCSTVTTLGYGDKSFNSEAGRLFAVFWI 257
Query: 68 LVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSI 118
L S++ +A+ +LY+A+ N + + R + KW+L ++IT +DL AADLD DG +
Sbjct: 258 LTSSICLAQFFLYVAELNTENKQRALVKWVLTRRITNNDLEAADLDEDGVV 308
>AT5G55630.1 | Symbols: KCO1, TPK1, ATKCO1, ATTPK1 | Outward
rectifying potassium channel protein |
chr5:22531718-22532893 FORWARD LENGTH=363
Length = 363
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 69/111 (62%), Gaps = 3/111 (2%)
Query: 8 CLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGRCFASLWL 67
CL L V+ +GT+ V + + Y ++VTT+GYGD S + AGR FA W+
Sbjct: 201 CLVLVVLF---IVGTIFLVMVEKMPVISAFYCVCSTVTTLGYGDKSFNSEAGRLFAVFWI 257
Query: 68 LVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSI 118
L S++ +A+ +LY+A+ N + + R + KW+L ++IT +DL AADLD DG +
Sbjct: 258 LTSSICLAQFFLYVAELNTENKQRALVKWVLTRRITNNDLEAADLDEDGVV 308
>AT1G02510.1 | Symbols: KCO4, ATKCO4, ATTPK4, TPK4 | Outward
rectifying potassium channel protein |
chr1:520687-521626 REVERSE LENGTH=284
Length = 284
Score = 85.9 bits (211), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
Query: 1 MRIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGR 60
+R++ K+CLA V V G + H LDW DS+YLSV SVTTVGYGD + TV GR
Sbjct: 150 IRLKWKLCLAFCAVGLCVGSGALFLHVFERLDWLDSVYLSVISVTTVGYGDKTFKTVEGR 209
Query: 61 CFASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSI 118
FA WLL+ST+A+A +LYLA+ + + +++ + S+ I L G I
Sbjct: 210 GFAVFWLLLSTIAMATLFLYLAEMRIDRTT------VMKLPPSESEFIVFKLRESGRI 261