Miyakogusa Predicted Gene

Lj2g3v2124250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2124250.1 Non Chatacterized Hit- tr|D8R129|D8R129_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,60.53,1e-18,seg,NULL; Complex1_LYR,Complex 1 LYR
protein,CUFF.38581.1
         (91 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G39725.2 | Symbols:  | LYR family of Fe/S cluster biogenesis ...   111   1e-25
AT2G39725.1 | Symbols:  | LYR family of Fe/S cluster biogenesis ...   111   1e-25

>AT2G39725.2 | Symbols:  | LYR family of Fe/S cluster biogenesis
          protein | chr2:16570070-16570342 FORWARD LENGTH=90
          Length = 90

 Score =  111 bits (277), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/89 (64%), Positives = 63/89 (70%)

Query: 1  MGVQRLSGMQKQVLSLYRGFLXXXXXXXXXXXXNMESIVSQEFRRNSKEVDRKNFLYIEY 60
          MG  +LSGMQKQVLSLYRGFL             +E IVS EFR NSKEVDRKNF YIEY
Sbjct: 1  MGASKLSGMQKQVLSLYRGFLRAARSRPIEDRKRIEMIVSTEFRHNSKEVDRKNFQYIEY 60

Query: 61 LLRRGTRQLDQLKNPGTTGLSSLQVDLSK 89
          LLR GT+QLDQLK+P    LSS++V  SK
Sbjct: 61 LLRLGTKQLDQLKSPAIVSLSSIKVVTSK 89


>AT2G39725.1 | Symbols:  | LYR family of Fe/S cluster biogenesis
          protein | chr2:16570070-16570342 FORWARD LENGTH=90
          Length = 90

 Score =  111 bits (277), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/89 (64%), Positives = 63/89 (70%)

Query: 1  MGVQRLSGMQKQVLSLYRGFLXXXXXXXXXXXXNMESIVSQEFRRNSKEVDRKNFLYIEY 60
          MG  +LSGMQKQVLSLYRGFL             +E IVS EFR NSKEVDRKNF YIEY
Sbjct: 1  MGASKLSGMQKQVLSLYRGFLRAARSRPIEDRKRIEMIVSTEFRHNSKEVDRKNFQYIEY 60

Query: 61 LLRRGTRQLDQLKNPGTTGLSSLQVDLSK 89
          LLR GT+QLDQLK+P    LSS++V  SK
Sbjct: 61 LLRLGTKQLDQLKSPAIVSLSSIKVVTSK 89