Miyakogusa Predicted Gene
- Lj2g3v1980810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1980810.1 tr|G7K2F8|G7K2F8_MEDTR U-box domain-containing
protein OS=Medicago truncatula GN=MTR_5g015210 PE=4 S,90.97,0,Modified
RING finger domain,U box domain; no description,Zinc finger,
RING/FYVE/PHD-type; no descrip,CUFF.38151.1
(449 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 668 0.0
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 626 e-179
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 154 1e-37
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 146 3e-35
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 137 1e-32
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 132 4e-31
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 129 3e-30
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 124 2e-28
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 119 3e-27
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 118 9e-27
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 116 3e-26
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 112 5e-25
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 111 9e-25
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 110 1e-24
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 109 3e-24
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 109 4e-24
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 109 4e-24
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 104 1e-22
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 96 7e-20
AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 92 6e-19
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 84 2e-16
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 83 3e-16
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 83 4e-16
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 80 3e-15
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 80 4e-15
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 78 1e-14
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 78 1e-14
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 77 4e-14
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 76 6e-14
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 75 1e-13
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 71 2e-12
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 71 2e-12
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 68 1e-11
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 68 1e-11
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 68 1e-11
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 68 1e-11
AT3G02840.1 | Symbols: | ARM repeat superfamily protein | chr3:... 65 9e-11
AT5G65500.1 | Symbols: | U-box domain-containing protein kinase... 65 1e-10
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 64 2e-10
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 2e-10
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 64 2e-10
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 64 3e-10
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 62 6e-10
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 60 2e-09
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 60 3e-09
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 60 3e-09
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 59 6e-09
AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |... 58 1e-08
AT3G49060.2 | Symbols: | U-box domain-containing protein kinase... 58 1e-08
AT3G49060.1 | Symbols: | U-box domain-containing protein kinase... 58 2e-08
AT1G01670.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 3e-08
AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat fam... 56 6e-08
AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat fam... 55 7e-08
AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat fam... 55 7e-08
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 55 8e-08
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 55 1e-07
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 54 1e-07
AT2G45910.1 | Symbols: | U-box domain-containing protein kinase... 54 3e-07
AT5G11550.1 | Symbols: | ARM repeat superfamily protein | chr5:... 53 4e-07
AT5G40140.1 | Symbols: | RING/U-box superfamily protein with AR... 53 5e-07
AT4G25160.1 | Symbols: | U-box domain-containing protein kinase... 52 1e-06
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 51 1e-06
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/449 (72%), Positives = 378/449 (84%), Gaps = 1/449 (0%)
Query: 1 MPMFQPSKRDMVAGFDGSGDGQILDLDTAVKXXXXXXXXXXXXXXXXCEKLDLANMIQEM 60
MPMFQP KRD + GF+G GDGQ+LDLDTAVK EKLDL MI+E+
Sbjct: 1 MPMFQPLKRDGLIGFEGGGDGQVLDLDTAVKDGVLGGVNGGGVGVVD-EKLDLKKMIKEL 59
Query: 61 ELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITP 120
+L ++PSVFICPISLEPMQDPVTLCTGQTYER NI KWFNLGH TCPTTMQELWDD++TP
Sbjct: 60 DLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTP 119
Query: 121 NTTLYRLIHTWFSQKYMLMKKRSEDVQGRASELVETLKKVKGQARVQALKELHHVVAAHG 180
N TL+ LI+TWFSQKY+LMKKRSEDVQGRA E++ TLKK KGQARV AL EL +V AH
Sbjct: 120 NKTLHHLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQARVHALSELKQIVIAHL 179
Query: 181 TARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTLDSESKRNLTQPAKISLMVDI 240
ARKTV++EGGVSV+SSLLGPFTSHAVGSEV+ ILVSL LDS+SK L QPAK+SL+VD+
Sbjct: 180 MARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSGLMQPAKVSLIVDM 239
Query: 241 LNEGSIETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMRLVKDKRHSNGISPGLSLLR 300
LN+GS ETKINC RLI L+EEK FR+E++SSHSLLVGLMRLVKDKRH NG+SP L LL+
Sbjct: 240 LNDGSNETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKRHRNGVSPALRLLK 299
Query: 301 TVCFYKEVRILLVSIGAVSQLVELLSGLDPDCLELALSVLDSLASIPEGRVALKDCSNTI 360
+ +K+VR L+VSIGAV QLV++L LDP+CLELAL VLD+L + EGRVA+KD +NTI
Sbjct: 300 PISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKDSANTI 359
Query: 361 PIMVRLLMRISESCTQYALSILWSVCKLAPEECSLIAVDAGLAAKLLLVIQSGCNPLLKQ 420
P VR+LMR+SE+CT YALSILWSVCKLAPEECS +AV+ GLAAKLLLVIQSGC+ LKQ
Sbjct: 360 PYTVRVLMRVSENCTNYALSILWSVCKLAPEECSPLAVEVGLAAKLLLVIQSGCDAALKQ 419
Query: 421 QSAELLKLCSLNYSDTIFISKCKLTRTIQ 449
+SAELLKLCSL+YSDT+FISKCKLTRTIQ
Sbjct: 420 RSAELLKLCSLHYSDTMFISKCKLTRTIQ 448
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 626 bits (1614), Expect = e-179, Method: Compositional matrix adjust.
Identities = 316/451 (70%), Positives = 365/451 (80%), Gaps = 9/451 (1%)
Query: 1 MPMFQPSKRDMVAGFDGSGDGQILDLDTAVKXXXXXXXXXXXXXXXXCEK--LDLANMIQ 58
MPMFQPSK +G DG ILDL +AVK EK LDL MI
Sbjct: 1 MPMFQPSK-------NGGFDGHILDLHSAVKDGVLGGGDGKFLVVVTDEKKKLDLKEMIS 53
Query: 59 EMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSI 118
E+EL E+PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFN+GH TCPTTMQELWDD +
Sbjct: 54 ELELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLV 113
Query: 119 TPNTTLYRLIHTWFSQKYMLMKKRSEDVQGRASELVETLKKVKGQARVQALKELHHVVAA 178
TPN TL++LI+TWFSQKY+LMKKRSEDVQGRA E++ TL+K KG+A+V AL EL VV A
Sbjct: 114 TPNKTLHQLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLRKAKGKAKVHALSELKQVVMA 173
Query: 179 HGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTLDSESKRNLTQPAKISLMV 238
H A+KTV+DEGGV V+SSLL PFTSHAVGSE I ILV+L LDS+SK L QPA++SLMV
Sbjct: 174 HAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELDSDSKAGLMQPARVSLMV 233
Query: 239 DILNEGSIETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMRLVKDKRHSNGISPGLSL 298
D+LN+GSIETKINC RLI L+EEK FR+E++SSHSLLVGLMRLVKD+R NG+SP L+L
Sbjct: 234 DMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVKDRRRRNGVSPALTL 293
Query: 299 LRTVCFYKEVRILLVSIGAVSQLVELLSGLDPDCLELALSVLDSLASIPEGRVALKDCSN 358
L++V +K+VR LLV IGAV QLV++L LD +CLE AL VLDSL EGR+ALKD N
Sbjct: 294 LKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLESEGRIALKDSVN 353
Query: 359 TIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSLIAVDAGLAAKLLLVIQSGCNPLL 418
TIP VRLLM++SE CT YA+SILWSVCKLA EECS +AV+ GLAAKLLLVIQSGC+P L
Sbjct: 354 TIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAVEVGLAAKLLLVIQSGCDPAL 413
Query: 419 KQQSAELLKLCSLNYSDTIFISKCKLTRTIQ 449
KQ+SAELLKLCSL+YSD++FISKCKLTRTIQ
Sbjct: 414 KQRSAELLKLCSLHYSDSMFISKCKLTRTIQ 444
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 190/372 (51%), Gaps = 24/372 (6%)
Query: 64 EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLG-HFTCPTTMQELWDDSITPNT 122
++P F CPISLE MQDPVT+CTGQTY+R++I W ++G + TCP T L D ++ PN
Sbjct: 13 QIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNH 72
Query: 123 TLYRLIHTW-------FSQKYMLMKKRSEDVQGRASELVETLKKVKG-----QARVQALK 170
TL RLI W ++ K+ ++ RA L+ + G ++R AL+
Sbjct: 73 TLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRA--LLSQASAITGTHVSVRSRAAALR 130
Query: 171 ELHHVVAAHGTARKTVIDEGGVSVMSSLL-GPFTSHAVGSEVIGILVSLTLDSESK--RN 227
L R + ++ +L TS + SE + +LV L + ++
Sbjct: 131 RLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFVSI 190
Query: 228 LTQPAKISLMVDILNEGSIETKINCTRLIESL---IEEKDFRSEIISSHSLLVGLMRLVK 284
+ P ++ + +L + SIET++N LIE + + D + I +S S+ G++ L++
Sbjct: 191 SSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLDLLR 250
Query: 285 DKRHS-NGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDPDC-LELALSVLDS 342
+ S + G+ L +C K R + ++ GA L++ L+ C E AL+ ++
Sbjct: 251 NPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATVEL 310
Query: 343 LASIPEGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSLIAVDAGL 402
L PEG A + + T+P++V+ ++R+S+ T+YA L ++C A E A AG+
Sbjct: 311 LCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCT-AEERWREEAAGAGV 369
Query: 403 AAKLLLVIQSGC 414
+LLL++QS C
Sbjct: 370 VVQLLLMVQSEC 381
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 209/397 (52%), Gaps = 30/397 (7%)
Query: 64 EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTT 123
++P F CPISL+ M DPVT+ TGQTY+R++I W +G+ TCP T L D ++ PN T
Sbjct: 13 QIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHT 72
Query: 124 LYRLIHTW-------FSQKYMLMKKRSEDVQGR-----ASELVETLKKVKGQA----RVQ 167
L RLI W ++ K+ ++ + R AS + T V+ +A R++
Sbjct: 73 LRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIRRLR 132
Query: 168 AL---KELHHVVAAHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTL-DSE 223
L E + V+ A AR+ ++ + + + S + SE + +LV L + ++E
Sbjct: 133 GLARDSEKNRVLIAGHNAREILVR----ILFADIETTSLSSELVSESLALLVLLHMTETE 188
Query: 224 SKRNLTQPAKISLMVDILNEGSIETKINCTRLIESLI---EEKDFRSEIISSHSLLVGLM 280
+ + P+++ M +L + SIE ++N LIE ++ + D + I S S+ G++
Sbjct: 189 CEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVL 248
Query: 281 RLVKDKRHS-NGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDPDC-LELALS 338
L+K+ S + G+ + +C K+ R L +S GA L++ L+ C E L+
Sbjct: 249 DLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLA 308
Query: 339 VLDSLASIPEGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSLIAV 398
++ L +PEG A + + T+P+MV+ ++R+S+ T+YA L ++C A E C A
Sbjct: 309 TVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCT-AEERCRDEAA 367
Query: 399 DAGLAAKLLLVIQSGCNPLLKQQSAELLKLCSLNYSD 435
AGL +LLL++QS C K+++ LLKL ++ D
Sbjct: 368 AAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPD 404
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 209/407 (51%), Gaps = 36/407 (8%)
Query: 57 IQEMELC-EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWD 115
+++ +LC VP+ F CPISL+ M+ PV+LCTG TY+R++I +W + G+ TCP TMQ L +
Sbjct: 1 MRKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQN 60
Query: 116 DSITPNTTLYRLIHTWF-SQKYMLMKKRSEDVQGRASELVETLKKVKGQARVQALKELHH 174
PN TL RLI W S + + +E E+ + + +VK + + +E+
Sbjct: 61 KDFIPNRTLQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKEERDDREVLS 120
Query: 175 VVAAHGTARKTVIDEGG-----------VSVMSSLLGPFTSHA---VGSEVIGILVSLTL 220
+ G R++ + G V +++ + TS A V E + IL ++
Sbjct: 121 KIVRFG--RESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRS 178
Query: 221 DSESKRNLTQ------PAKISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIISSHS 274
+R + ++S++V + G++E KI+C L+E + + + + I
Sbjct: 179 KVSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERDG 238
Query: 275 LLVGLMRLVKDKRHSNGISPGLSLLRTVCFYKEVRILLVS---IGAVSQ-LVELLSGLDP 330
L+ LM+ + + I LS L + K V++ L+ IG V++ L + S L
Sbjct: 239 LITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLSV 298
Query: 331 DCLELALSVLDSLASIPEGRVAL----KDCSNTIPIMVRLLMRISESCTQYALSILWSVC 386
E L +L+ LAS EGR + +C T+ V+ LM++S + T++A+++LWSV
Sbjct: 299 SVTEKCLKLLEILASTKEGRSEICGGDGECLKTV---VKKLMKVSTAATEHAVTVLWSVS 355
Query: 387 KLAPEECSLIAVDA-GLAAKLLLVIQSGCNPLLKQQSAELLKLCSLN 432
L E+ +L AV + K+LL++QS C+P +++ +LLK+ +N
Sbjct: 356 YLFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKVN 402
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 194/395 (49%), Gaps = 19/395 (4%)
Query: 64 EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLG-HFTCPTTMQELWDDSITPNT 122
E+P F+CPISLE M+DPV + TG TY+R +I KW G +CP T Q++ D +TPN
Sbjct: 11 EIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNH 70
Query: 123 TLYRLIHTW--FSQKYMLMKKRSEDVQGRASELVETLKKVKG--QARVQALKELHHVVAA 178
TL RLI +W + Y + + + SE+ + ++ + +V+ LK L +V+
Sbjct: 71 TLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQIVSE 130
Query: 179 HGTARKTVIDEGGVSVMSSLLGPFTSH-AVGSEVIGILVSL----TLDSESKRNLTQPAK 233
+ T ++ + G +++++ + + ++ E + +L L T+ N
Sbjct: 131 NATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLLNNKKDNNI 190
Query: 234 ISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMRLVKDKRHSNGIS 293
+ + I+ G E+++ T L+++++E D + + +++++ D+
Sbjct: 191 VKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRISQKATK 250
Query: 294 PGLSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDPDCL------ELALSVLDSLASIP 347
+ +L +C + R V G +S ++ELL +D E+A+ VLD L
Sbjct: 251 AAMHILVNICPWGRNRHKAVEAGVISVIIELL--MDESFTSERRGPEMAMVVLDLLCQCA 308
Query: 348 EGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSLIAV-DAGLAAKL 406
EGR + I ++ + ++R+S++ + A+ +L SV + L + G+ AKL
Sbjct: 309 EGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEMLQLGVVAKL 368
Query: 407 LLVIQSGCNPLLKQQSAELLKLCSLNYSDTIFISK 441
LV+Q C K+++ ELLKL + + D+ + K
Sbjct: 369 CLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPK 403
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 199/390 (51%), Gaps = 21/390 (5%)
Query: 65 VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTL 124
VPS F CPISL+ M+ PV+LCTG TY+R++I +W + G+ TCP TMQ L PN TL
Sbjct: 12 VPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTL 71
Query: 125 YRLIHTWFSQKYMLMKKRSEDVQGRASELVETLKKVKG-QARVQALKELHHVV--AAHGT 181
RLI+ W S + + V T ++V R+ +L+ L +V
Sbjct: 72 QRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLENLMKIVRFVKDSD 131
Query: 182 ARKTVIDEGGVSVMSSLLGPFTSHAVGSEV----IGILVSLTLDSESKRNLTQPAK---- 233
+ + + + + + L+ + E+ I IL S+ +D E NL
Sbjct: 132 SNREFLSK-KMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKVDRERLSNLMLANDGGDC 190
Query: 234 ISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMRLVKDKRHSNG-- 291
++ ++ + G++E+KI R+++ + + + I +L +M+ + S+
Sbjct: 191 LTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSISITESSDPSL 250
Query: 292 ISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELL---SGLDPDCLELALSVLDSLASIPE 348
I LS L T+ K VR L++ A++++ ++L + + E +L +L++L+S E
Sbjct: 251 IEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEKSLKLLETLSSKRE 310
Query: 349 GRVAL--KDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSL--IAVDAGLAA 404
GR+ + D + +V+ L+++S + T++A++ILW +C + E+ ++ +
Sbjct: 311 GRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDKTVEETVERSNGVT 370
Query: 405 KLLLVIQSGCNPLLKQQSAELLKLCSLNYS 434
KLL+VIQS C+ +++Q + +L+K+ N S
Sbjct: 371 KLLVVIQSNCSAMVRQMAKDLIKVLKFNSS 400
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 184/384 (47%), Gaps = 32/384 (8%)
Query: 65 VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTL 124
+P F CPISLE M+DPV + TGQTYERS+I KW + GH TCP + + L +TPN L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 125 YRLIHTWFSQKYMLMKK-----RSEDVQGRAS---------ELVETLKKVKGQARVQALK 170
LI W + + + R+ + G +S L+E L + + A
Sbjct: 308 KSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAG 367
Query: 171 ELHHVVAAHGTARKTVIDEGGVSVMSSLLG---PFT-SHAVGSEVIGILVSLTLDSESKR 226
EL + + R + + G + ++ LL P T H+V + L++L+++ +K
Sbjct: 368 ELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTA-----LLNLSINEGNKG 422
Query: 227 NLTQPAKISLMVDILNEGSIETKINCTRLIESL--IEEKDFRSEIISSHSLLVGLMRLVK 284
+ I+ +V++L GS+E + N + SL I+E + L+ L+
Sbjct: 423 AIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLL---- 478
Query: 285 DKRHSNGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDPDCLELALSVLDSLA 344
++ G + + +C Y+ + V G V L LL ++ AL++L L+
Sbjct: 479 EEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILS 538
Query: 345 SIPEGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSLIAVDAGLAA 404
+ EG+ A+ + + +IP++V ++ S + A +ILW +C E + +A + G
Sbjct: 539 TNQEGKTAIAE-AESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLN-VAREVGADV 596
Query: 405 KLLLVIQSGCNPLLKQQSAELLKL 428
L + ++G + K+++A LL+L
Sbjct: 597 ALKELTENGTD-RAKRKAASLLEL 619
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 201/411 (48%), Gaps = 33/411 (8%)
Query: 58 QEMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDS 117
++ + VP F CPISL+ M+ PV+L TG TY+R +I +W + G+ TCP TMQ L +
Sbjct: 4 DDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKE 63
Query: 118 ITPNTTLYRLIHTWFSQKYMLMKKRSED----VQGRASELVETLKKVKGQARVQALKELH 173
PN TL+RLI W S + + + +E + ++ AR + L+
Sbjct: 64 FVPNLTLHRLIDHWSDSINRRADSESPESDTPTRDEINAAIERFR-IENDARSKILR--- 119
Query: 174 HVVAAHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTLDSESKRNLTQPAK 233
R+ + + M L + + S+++ + ++ + S +R + +
Sbjct: 120 -FARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIFDRRR 178
Query: 234 ISLMVD------------ILNEGSIETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMR 281
+S ++ ++ G+ + KI+C+ ++E + + + + I L+ +++
Sbjct: 179 LSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEIIK 238
Query: 282 LVKDKRHSNGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDP----DCLELAL 337
L+ S+ I LSLL + K V++ L+ V++L LL+ DP E L
Sbjct: 239 LISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLT--DPTTSVSVTEKCL 296
Query: 338 SVLDSLASIPEGRVALKD--CSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSL 395
+L++++S EGR + D C T+ V LM++S + T++A+++LWSVC L E+ +
Sbjct: 297 KLLEAISSCKEGRSEICDGVCVETV---VNKLMKVSTAATEHAVTVLWSVCYLFKEKKAQ 353
Query: 396 IAV-DAGLAAKLLLVIQSGCNPLLKQQSAELLKLCSLNYSDTIFISKCKLT 445
AV K+LL++QS C+ ++ +LLK+ +N + + + K T
Sbjct: 354 DAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVNSRSCLSVYETKTT 404
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 177/386 (45%), Gaps = 24/386 (6%)
Query: 58 QEMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDS 117
+E+E+ +PS F CPIS E M+DPV + +G TY+R NI KWF G+ TCP T L
Sbjct: 27 EEVEIT-IPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLE 85
Query: 118 ITPNTTLYRLIHTWFSQKY-----MLMKKRSEDVQGRASELVETLKKVKGQARVQALKEL 172
PN T+ R+I W + R + SE+ E L + A E+
Sbjct: 86 QIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEM 145
Query: 173 HHVVAAHGTA----RKTVIDEGGVSVMSSLLGPFTSHAVGS----EVIGILV-SLTLDSE 223
+ G RK V + G V+ F+ +A S E + +L L + E
Sbjct: 146 VTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWMLPIGLE 205
Query: 224 SKRNLTQPAKISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIISS-HSLLVGLMRL 282
+ LT + + +V++L G N LI+ L+E ++ + + M+
Sbjct: 206 GQSKLTTTSSFNRLVELLRNGD----QNAAFLIKELLELNVTHVHALTKINGVQEAFMKS 261
Query: 283 VKDKRHSNGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDPDCLELALSVLDS 342
+ R S ++ +S+ + +E + + V+ VE+L + E AL+VL+
Sbjct: 262 I--NRDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDSENSVCEKALTVLNV 319
Query: 343 LASIPEGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSLIAVDAGL 402
+ EGR ++ IPI+V+ +++ISE + +S++W VCK A+ G
Sbjct: 320 ICETKEGREKVRRNKLVIPILVKKILKISEK--KDLVSVMWKVCKSGDGSEVEEALRLGA 377
Query: 403 AAKLLLVIQSGCNPLLKQQSAELLKL 428
KL++++Q GC K++ ELLK+
Sbjct: 378 FKKLVVMLQVGCGEGTKEKVTELLKM 403
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 166/338 (49%), Gaps = 16/338 (4%)
Query: 65 VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTL 124
+P F+CP+SLE M+DPV + TGQTYER+ I +W + G+ TCP T Q+L + ++TPN L
Sbjct: 241 IPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVL 300
Query: 125 YRLIHTWFSQK-------YMLMKKRSEDVQGRASELVETLKKVKGQARVQALKELHHVVA 177
LI W ++ Y+ + ++ LV+ L + R A+ E+ +
Sbjct: 301 RSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSK 360
Query: 178 AHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSE--VIGILVSLTLDSESKRNLTQPAKIS 235
R + + G + V+ +LL TS V ++ I +++L++ +K + ++
Sbjct: 361 RSTDNRILIAEAGAIPVLVNLL---TSEDVATQENAITCVLNLSIYENNKELIMFAGAVT 417
Query: 236 LMVDILNEGSIETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMRLVKDKRHSNGISPG 295
+V +L G++E + N + SL D II + L+ L+++ G
Sbjct: 418 SIVQVLRAGTMEARENAAATLFSL-SLADENKIIIGGSGAIPALVDLLENG-TPRGKKDA 475
Query: 296 LSLLRTVCFYKEVRILLVSIGAVSQLVELLS-GLDPDCLELALSVLDSLASIPEGRVALK 354
+ L +C Y + V G V+ LV++LS ++ AL++L LA+ + + A+
Sbjct: 476 ATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIV 535
Query: 355 DCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEE 392
+NT+P ++ +L + A +IL S+CK E+
Sbjct: 536 K-ANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEK 572
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 190/409 (46%), Gaps = 44/409 (10%)
Query: 64 EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKW-FNLGHFTCPTTMQELWDDSITPNT 122
E+PS F+CPISL+ M+DPV + TG TY+R +I KW F+ +CP T Q + + +TPN
Sbjct: 6 EIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNH 65
Query: 123 TLYRLIHTW--FSQKYMLMKKRSEDVQGRASELVETLKKVKGQ--ARVQALKELHHVVAA 178
TL RLI +W + Y + + + SE+ + +K+ +V+ LK L +V+
Sbjct: 66 TLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVSE 125
Query: 179 HGTARKTV----IDEGGVSVMSSLLGPF--------------------------TSHAVG 208
+ T ++ + + E +++S+ + + +S ++
Sbjct: 126 NTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSSRSLM 185
Query: 209 SEVIGILVSLTLDSESKRNLTQPAK----ISLMVDILNEGSIETKINCTRLIESLIEEKD 264
E + +L L + ++L K + + I+ G E++ L++ L+E D
Sbjct: 186 DEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKKLLEVAD 245
Query: 265 FRSEIISSHSLLVGLMRLVKDKRHSNGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVEL 324
I+ L +++++ D+ + +L C + R V G +S ++EL
Sbjct: 246 PMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGTISMIIEL 305
Query: 325 LS----GLDPDCLELALSVLDSLASIPEGRVALKDCSNTIPIMVRLLMRISESCTQYALS 380
L + E+A+ VLD L EGR + I ++ + ++R+S+ ++ A+
Sbjct: 306 LMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSERAVR 365
Query: 381 ILWSVCKLAPEECSLIAV-DAGLAAKLLLVIQSGCNPLLKQQSAELLKL 428
+L SV + L + G+ AKL LV+Q C K+++ ELLKL
Sbjct: 366 VLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKL 414
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 196/448 (43%), Gaps = 92/448 (20%)
Query: 53 LANMIQEMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQE 112
M QE E E+P+ FICPISLE M+DPVT +G TY+R NI+KW +CP T Q
Sbjct: 12 FPQMDQEEEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLE-KVPSCPVTKQP 70
Query: 113 L-WDDSITPNTTLYRLIHTWF--SQKYMLMKKRSEDVQGRASELVETLKKVK--GQ---A 164
L D +TPN L RLI W ++ +++ + V +VE +K +K GQ
Sbjct: 71 LPLDSDLTPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALG 130
Query: 165 RVQALKELHHVVAAHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTLDSES 224
R + L++L V+A G R+ + + G V +I +V T + E
Sbjct: 131 REETLQKL-EVLAMDGNNRRLMCECG----------------VHKSLILFVVKCTSEDED 173
Query: 225 KRN----LTQPAKISLMVDILNEGSIETKINCTRLIESL---IEEKDFRS---------- 267
R L + ++ ++ I + + + R++ESL + ++DF S
Sbjct: 174 GRRRIKGLDESLRLLHLIGIPSNDAKTILMENDRVMESLTWVLHQEDFLSKAYTIVLLRN 233
Query: 268 --EIISSH-------SLLVGLMRLVKDKRHS-NGISP----------------------- 294
E SSH + G++ +KD +S N SP
Sbjct: 234 LTEYTSSHIVERLNPEIFKGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLD 293
Query: 295 -----------GLSLLRTVCFYKEVRILLVSIGAVSQLVEL---LSGLDPDCLELALSVL 340
L +L + R LLV +GAVS+L+EL +G + EL L VL
Sbjct: 294 HSLVIKQAVTAALMILLETSSWSRNRSLLVDLGAVSELIELEISYTG-EKRITELMLGVL 352
Query: 341 DSLASIPEGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSLIA-VD 399
L GR + I ++ + L+R+S + A+SIL +V K +PE + V+
Sbjct: 353 SRLCCCANGRAEILAHRGGIAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVN 412
Query: 400 AGLAAKLLLVIQSGCNPLLKQQSAELLK 427
G KL V+ C LK+++ E+LK
Sbjct: 413 VGTVEKLCSVLGMDCGLNLKEKAKEILK 440
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 173/385 (44%), Gaps = 31/385 (8%)
Query: 65 VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTL 124
+P F CPISLE M+DPV + +GQTYER+ I KW GH TCP T Q L ++TPN L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 125 YRLIHTWFSQKYMLMKKRSEDVQGRA-------------SELVETLKKVKGQARVQALKE 171
LI W + K ++ R +L+ L + + A E
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGE 375
Query: 172 LHHVVAAHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTLDSESKRNLTQP 231
+ + + R + + G + ++ LL S + + L++L++ +K +
Sbjct: 376 IRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSR-IQEHSVTALLNLSICENNKGAIVSA 434
Query: 232 AKISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMRLVK------D 285
I +V +L +GS+E + N + SL +I + + +G + + +
Sbjct: 435 GAIPGIVQVLKKGSMEARENAAATLFSL--------SVIDENKVTIGALGAIPPLVVLLN 486
Query: 286 KRHSNGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDPDCLELALSVLDSLAS 345
+ G + L +C Y+ + + G + L LL+ ++ AL++L L+S
Sbjct: 487 EGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSS 546
Query: 346 IPEGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSLIAVDAGLAAK 405
PEG+ A+ S+ +P +V + S + A ++L +C P+ + A GL
Sbjct: 547 HPEGK-AIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHL-VEAQKLGLMGP 604
Query: 406 LLLVIQSGCNPLLKQQSAELLKLCS 430
L+ + +G + K+++A+LL+ S
Sbjct: 605 LIDLAGNGTD-RGKRKAAQLLERIS 628
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 162/351 (46%), Gaps = 19/351 (5%)
Query: 58 QEMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDS 117
Q+ + +P F+CPISLE M+DP + TGQTYERS I +W + G+ +CP T Q+L + +
Sbjct: 88 QKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFT 147
Query: 118 ITPNTTLYRLIHTW-----FSQKYMLMKKRSEDVQGRASELVETLKKVKG---------- 162
+TPN L LI W Q M R+++ G +L + ++
Sbjct: 148 LTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSI 207
Query: 163 QARVQALKELHHVVAAHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTLDS 222
+ R A+ E+ + R + + G + V+ LL + +++L++
Sbjct: 208 EDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYE 267
Query: 223 ESKRNLTQPAKISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMRL 282
+K + ++ +V +L GS+E + N + SL D II + ++ L+ L
Sbjct: 268 HNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSL-SLADENKIIIGASGAIMALVDL 326
Query: 283 VKDKRHSNGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDPDCL-ELALSVLD 341
++ G + L +C Y+ + V G V LV++L+ + + + AL++L
Sbjct: 327 LQ-YGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILS 385
Query: 342 SLASIPEGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEE 392
LAS + A+ +N IP ++ L + + A +IL +CK E+
Sbjct: 386 VLASNQVAKTAILR-ANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEK 435
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 162/351 (46%), Gaps = 19/351 (5%)
Query: 58 QEMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDS 117
Q+ + +P F+CPISLE M+DP + TGQTYERS I +W + G+ +CP T Q+L + +
Sbjct: 236 QKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFT 295
Query: 118 ITPNTTLYRLIHTW-----FSQKYMLMKKRSEDVQGRASELVETLKKVKG---------- 162
+TPN L LI W Q M R+++ G +L + ++
Sbjct: 296 LTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSI 355
Query: 163 QARVQALKELHHVVAAHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTLDS 222
+ R A+ E+ + R + + G + V+ LL + +++L++
Sbjct: 356 EDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYE 415
Query: 223 ESKRNLTQPAKISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMRL 282
+K + ++ +V +L GS+E + N + SL D II + ++ L+ L
Sbjct: 416 HNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSL-SLADENKIIIGASGAIMALVDL 474
Query: 283 VKDKRHSNGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDPDCL-ELALSVLD 341
++ G + L +C Y+ + V G V LV++L+ + + + AL++L
Sbjct: 475 LQ-YGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILS 533
Query: 342 SLASIPEGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEE 392
LAS + A+ +N IP ++ L + + A +IL +CK E+
Sbjct: 534 VLASNQVAKTAILR-ANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEK 583
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 122/242 (50%), Gaps = 24/242 (9%)
Query: 65 VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTL 124
+P F+CPI+LE M DPV + TGQTYE+ +I KWF+ GH TCP T QEL S+ PN L
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFAL 349
Query: 125 YRLIHTWFSQKYMLM--KKRSEDVQGRASE----LVETLKKVKGQARVQALKELHHVVAA 178
LI W + + K+ S D Q + LVE L + + + +++K++ +
Sbjct: 350 KNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARE 409
Query: 179 HGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTLDSESKRNLTQPAKISLMV 238
+ R + + G + ++ LL + + + L++L++D +K+ ++ I ++
Sbjct: 410 NPENRVLIANAGAIPLLVQLLS-YPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNII 468
Query: 239 DILNEGSIETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMRLVKDKRHSNGISPGLSL 298
+IL G+ E + N + SL ++ + + +GL SNGI P + L
Sbjct: 469 EILENGNREARENSAAALFSL--------SMLDENKVTIGL---------SNGIPPLVDL 511
Query: 299 LR 300
L+
Sbjct: 512 LQ 513
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 173/384 (45%), Gaps = 26/384 (6%)
Query: 66 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLY 125
P F CPISLE M DPV + +GQTYER I KW GH TCP T + L D +TPN L
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLR 316
Query: 126 RLIHTWFSQKYMLMKKR----------------SEDVQGRASELVETLKKVKGQARVQAL 169
LI W + KR +D + EL+ L + + R A
Sbjct: 317 SLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRSAA 376
Query: 170 KELHHVVAAHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTLDSESKRNLT 229
E+ + + R + G + ++ +LL + +++L++ E+K +
Sbjct: 377 GEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIV 436
Query: 230 -QPAKISLMVDILNEGSIETKINCTRLIESL--IEEKDFRSEIISSHSLLVGLMRLVKDK 286
+ +V +L +GS+E + N + SL I+E I + + L+ L+ +
Sbjct: 437 YSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKV---TIGAAGAIPPLVTLLSEG 493
Query: 287 RHSNGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDPDCLELALSVLDSLASI 346
G + L +C ++ + V G V L+ LL+ + ++ +LS+L L+S
Sbjct: 494 SQ-RGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSH 552
Query: 347 PEGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSLIAVDAGLAAKL 406
P+G+ + ++ +P++V + S + + ++L +C + + A G+ L
Sbjct: 553 PDGKSEV-GAADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHL-IEAQKLGIMDLL 610
Query: 407 LLVIQSGCNPLLKQQSAELLKLCS 430
+ + ++G + K+++A+LL S
Sbjct: 611 IEMAENGTD-RGKRKAAQLLNRFS 633
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 173/384 (45%), Gaps = 24/384 (6%)
Query: 65 VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTL 124
+P F CPIS++ M+DPV + TG TY+R +I W N G+ TCP T L PN T+
Sbjct: 31 IPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTI 90
Query: 125 YRLIHTWFSQKYMLMKKR--SEDVQGRASELVETLKKVKGQAR----------VQALKEL 172
++I W +K + +R + V E+ E +K+ R ++ +K+L
Sbjct: 91 RKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIEKIKKL 150
Query: 173 HHVVAAHGTARKTVIDEGGVS-VMSSLLGPFTSHAVGSEVIGILVSL-----TLDSESKR 226
+ ++E V V+ F+ + ++ ++SL + E
Sbjct: 151 ----GDESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEILSLLTWMFPIGLEGIS 206
Query: 227 NLTQPAKISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIIS-SHSLLVGLMRLVKD 285
L + +L + N +++ ++ + R + + + L++L++D
Sbjct: 207 KLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEALVKLIRD 266
Query: 286 KRHSNGISPGLSLLRTVCFYK-EVRILLVSIGAVSQLVELLSGLDPDCLELALSVLDSLA 344
S+ L + + K E+ + IG VS VE++ + E AL+VLD++
Sbjct: 267 SVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEKALAVLDAIC 326
Query: 345 SIPEGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSLIAVDAGLAA 404
GR ++ + +P++V+ + ++SE T+ ++S++ + K AV G
Sbjct: 327 ETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNTVAVEDAVRLGAFQ 386
Query: 405 KLLLVIQSGCNPLLKQQSAELLKL 428
K+LLV+Q G K+++ ELLK+
Sbjct: 387 KVLLVLQVGYGEETKEKATELLKM 410
>AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=415
Length = 415
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 166/386 (43%), Gaps = 40/386 (10%)
Query: 58 QEMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDS 117
+E+E+ +PS F CPIS E M+DP WF G+ TCP T L
Sbjct: 27 EEVEIT-IPSQFQCPISYELMKDP----------------WFESGYQTCPVTNTVLTSLE 69
Query: 118 ITPNTTLYRLIHTWFSQKY-----MLMKKRSEDVQGRASELVETLKKVKGQARVQALKEL 172
PN T+ R+I W + R + SE+ E L + A E+
Sbjct: 70 QIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEM 129
Query: 173 HHVVAAHGTA----RKTVIDEGGVSVMSSLLGPFTSHAVGS----EVIGILV-SLTLDSE 223
+ G RK V + G V+ F+ +A S E + +L L + E
Sbjct: 130 VTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWMLPIGLE 189
Query: 224 SKRNLTQPAKISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIISS-HSLLVGLMRL 282
+ LT + + +V++L G N LI+ L+E ++ + + M+
Sbjct: 190 GQSKLTTTSSFNRLVELLRNGDQ----NAAFLIKELLELNVTHVHALTKINGVQEAFMKS 245
Query: 283 VKDKRHSNGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDPDCLELALSVLDS 342
+ R S ++ +S+ + +E + + V+ VE+L + E AL+VL+
Sbjct: 246 IN--RDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDSENSVCEKALTVLNV 303
Query: 343 LASIPEGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSLIAVDAGL 402
+ EGR ++ IPI+V+ +++ISE + +S++W VCK A+ G
Sbjct: 304 ICETKEGREKVRRNKLVIPILVKKILKISEK--KDLVSVMWKVCKSGDGSEVEEALRLGA 361
Query: 403 AAKLLLVIQSGCNPLLKQQSAELLKL 428
KL++++Q GC K++ ELLK+
Sbjct: 362 FKKLVVMLQVGCGEGTKEKVTELLKM 387
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 34/316 (10%)
Query: 50 KLDLANMIQEMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTT 109
K+ ++ ++ +E P F CP+S E M+DPV L +GQTY++ I KW + G+ TCP T
Sbjct: 59 KMAKSSSLEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKT 118
Query: 110 MQELWDDSITPNTTLYRLIHTW--------FSQKYMLMKKRSEDVQGRASELVETLK-KV 160
Q L ++TPN + +I W SQ + + E V E+ +L KV
Sbjct: 119 QQVLPHTALTPNLLIREMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKV 178
Query: 161 KG---QARVQALKELHHVVAAHGTARKTVI----DEGGVSVMSSLLGPFTSHAVGSEVIG 213
Q + A KEL ++ GT + + DE V L G + +V+
Sbjct: 179 SSSNLQDQKSAAKEL-RLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVT 237
Query: 214 ILVSLTLDSESKRNLT--QPAKISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIIS 271
L+++++ +S + L P I L++D L G++ T+ N I F +
Sbjct: 238 TLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAI--------FTLSALD 289
Query: 272 SHSLLVGLMRLVK------DKRHSNGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELL 325
S+ +L+G ++K ++ + I + + T+C E R V GAV L + +
Sbjct: 290 SNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKI 349
Query: 326 S-GLDPDCLELALSVL 340
S GL D L L++L
Sbjct: 350 SNGLYVDELLAILAML 365
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%)
Query: 65 VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTL 124
VP F+CPISL+ M DPV + TGQTY+R++I +W GH TCP T Q L D I PN L
Sbjct: 305 VPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRAL 364
Query: 125 YRLIHTW 131
LI W
Sbjct: 365 KNLIVQW 371
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 157/333 (47%), Gaps = 20/333 (6%)
Query: 64 EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDS-ITPNT 122
++P+ F CPISLE M DPV L +G T++R +I +W + G+ TCP T L + + PN
Sbjct: 4 DLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNH 63
Query: 123 TLYRLIHTWFS---QKYMLMKKRSEDVQGRASELVETL--KKVKGQARVQALKELHHVVA 177
L LI + ++ + + E ++ L+ TL + +++++L L +
Sbjct: 64 ALRSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLTK 123
Query: 178 AHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTLDSESKRNLTQPAKISLM 237
+ R+ V + G V + + + + + +L++L+L+ ++K L I +
Sbjct: 124 RDSSIRRKVTESGAVRAALDCVDS-CNQVLQEKSLSLLLNLSLEDDNKVGLVADGVIRRI 182
Query: 238 VDILNEGSIETKINCTRLIESLIEEKDFRSEIIS---SHSLLVGLMRLVKDKRHSNGISP 294
V +L GS + K L+ SL + ++ I S + S LV L+R+ D+ +
Sbjct: 183 VTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRERKESATA 242
Query: 295 GLSLLRTVCFYKEVRILLVSIGAVSQLVELL-SGLDPDCLELALSVLDSLASIPEGRVAL 353
L +C + + R +V G+V LVE SG LE A+ VL L GR +
Sbjct: 243 ----LYALCSFPDNRKRVVDCGSVPILVEAADSG-----LERAVEVLGLLVKCRGGREEM 293
Query: 354 KDCSNTIPIMVRLLMRISESCTQYALSILWSVC 386
S + ++V +L + QY+L IL +C
Sbjct: 294 SKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLC 326
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 101/241 (41%), Gaps = 17/241 (7%)
Query: 58 QEMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDS 117
Q + +P+ F CPI+LE M+DPV + TGQTY+R +I W GH TCP T Q L S
Sbjct: 267 QSLSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTS 326
Query: 118 ITPNTTLYRLIHTWFSQKYMLM-------------KKRSEDVQGRASELVETLKKVKGQA 164
+ PN L LI W + + K+ E + S L+E L
Sbjct: 327 LVPNRALKNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNG 386
Query: 165 RVQALKELHHVVAAHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTLDSES 224
V EL + + AR + + G + + L + V IL L+
Sbjct: 387 VV---FELRALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSILEQNK 443
Query: 225 KRNLTQPAKISLMVDILNEGSI-ETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMRLV 283
R + ++ ++++L G+ E K N + SL +R + ++ GL+ L
Sbjct: 444 TRIMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLA 503
Query: 284 K 284
K
Sbjct: 504 K 504
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 43/316 (13%)
Query: 69 FICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLYRLI 128
+CPISLE M DPV + TG TY+RS+I KWF G+ TCP T + L + N ++ ++I
Sbjct: 292 LLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVI 351
Query: 129 HTWFSQKYMLMKKRSEDVQGRASELVETLKKVKGQARV------------------QALK 170
+++ S + + E+L KG ++ +A++
Sbjct: 352 RKHCKTNGIVLAGISRRRKSHDDVVPESL-AAKGAGKLIAKFLTSELINGGEEMIYRAVR 410
Query: 171 ELHHVVAAHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTLDSESKRNLTQ 230
E+ R ++ G V+ + LL + + GIL +++T
Sbjct: 411 EIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGIL-------NLSKHVTG 463
Query: 231 PAKIS-----LMVDILNEGS-IETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMRLVK 284
+KI+ ++V+ILNEG+ ET++ + L +D+ I + + GLM +VK
Sbjct: 464 KSKIAGEGLKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVK 523
Query: 285 -DKRHSNGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELL------SGLDPDCLELAL 337
D + L + + + +++ GAV L++LL GL DC L
Sbjct: 524 GDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADC----L 579
Query: 338 SVLDSLASIPEGRVAL 353
+ L LA P+G + +
Sbjct: 580 ATLAKLAEYPDGTIGV 595
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 48/80 (60%)
Query: 55 NMIQEMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELW 114
N I ++ P CPISL+ M DPV + +GQTYER I KWF+ GH TCP T Q+L
Sbjct: 262 NSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLP 321
Query: 115 DDSITPNTTLYRLIHTWFSQ 134
S+TPN + LI +W Q
Sbjct: 322 HISLTPNNCVKGLIASWCEQ 341
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 48/80 (60%)
Query: 55 NMIQEMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELW 114
N I ++ P CPISL+ M DPV + +GQTYER I KWF+ GH TCP T Q+L
Sbjct: 262 NSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLP 321
Query: 115 DDSITPNTTLYRLIHTWFSQ 134
S+TPN + LI +W Q
Sbjct: 322 HISLTPNNCVKGLIASWCEQ 341
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 159/344 (46%), Gaps = 36/344 (10%)
Query: 71 CPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLYRLIHT 130
CPISLE M DPV L +G TY+RS+I KWF G+ TCP T + L + N ++ ++I +
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQS 343
Query: 131 WFSQKYMLM----KKRSEDVQGRASE---------LVETLKKVKGQARVQALKELHHVVA 177
+ Q ++M KK+ + + A+E L L K + V+AL E+ +
Sbjct: 344 YSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRILTK 403
Query: 178 AHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVIGILVSLTLDSESKRNLT--QPAKIS 235
R +++ G V + +L + + GI+ +L+ D K + +
Sbjct: 404 TSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIM-NLSKDIAGKTRIVGEDGGGLR 462
Query: 236 LMVDILNEGS-IETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMRLVK-----DKRHS 289
L+V++LN+G+ E++ + L D+ I + GL+R+VK D
Sbjct: 463 LIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAKR 522
Query: 290 NGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELL------SGLDPDCLELALSVLDSL 343
N + SLL + +++ G V L++L+ G+ D ++++L +
Sbjct: 523 NALIAIRSLLMN---QPDNHWRILAAGIVPVLLDLVKSEEISDGVTAD----SMAILAKM 575
Query: 344 ASIPEGRVA-LKDCSNTIPIMVRLLMRISESCTQYALSILWSVC 386
A P+G ++ L+ + + + +S + Q+ +++L ++C
Sbjct: 576 AEYPDGMISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLC 619
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%)
Query: 66 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLY 125
P CPISL+ M DPV + +GQTYER I KWF+ GH +CP T Q+L S+TPN +
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 126 RLIHTWFSQ 134
LI +W Q
Sbjct: 336 GLIASWCEQ 344
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%)
Query: 66 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLY 125
P CPISL+ M DPV + +GQTYER I KWF+ GH TCP T Q+L +TPN +
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 126 RLIHTWFSQK 135
LI +W Q
Sbjct: 340 ALISSWCEQN 349
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 69 FICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLYRLI 128
F CP+SLE M DPV + +GQTYE++ I +W +LG CP T Q L ++ PN T+ LI
Sbjct: 237 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALI 296
Query: 129 HTW 131
W
Sbjct: 297 ANW 299
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 135/290 (46%), Gaps = 23/290 (7%)
Query: 145 DVQGRASELVETLKKVKGQARVQALKELHHVVAAHGTARKTVIDEGGVSVMSSLLGPFTS 204
+V+ + +LVE LK + QA EL ++A H + VI G V+ L T
Sbjct: 541 EVETQVKKLVEELKSSSLDTQRQATAELR-LLAKHNMDNRIVIGNSGAIVLLVELLYSTD 599
Query: 205 HAVGSEVIGILVSLTLDSESKRNLTQPAKISLMVDILNEGSIETKINCTRLIESL--IEE 262
A + L++L+++ +K+ + I ++ +L GS E K N + SL IEE
Sbjct: 600 SATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEE 659
Query: 263 KDFRSEIISSHSLLVGLMRLVKDKRHSNGISPGLSLLRTVCF----YKEVRILLVSIGAV 318
+ + LV L+ NG G T F ++E + ++V GAV
Sbjct: 660 NKIKIGQSGAIGPLVDLL--------GNGTPRGKKDAATALFNLSIHQENKAMIVQSGAV 711
Query: 319 SQLVELLSGLDPDC--LELALSVLDSLASIPEGRVALKDCSNTIPIMVRLLMRISESCTQ 376
L++L+ DP ++ A++VL +LA+IPEGR A+ IP++V ++ S +
Sbjct: 712 RYLIDLM---DPAAGMVDKAVAVLANLATIPEGRNAIGQ-EGGIPLLVEVVELGSARGKE 767
Query: 377 YALSILWSVCKLAPEECSLIAVDAGLAAKLLLVIQSGCNPLLKQQSAELL 426
A + L + + C+++ + G L+ + QSG P ++++ LL
Sbjct: 768 NAAAALLQLSTNSGRFCNMV-LQEGAVPPLVALSQSGT-PRAREKAQALL 815
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 69 FICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLYRLI 128
F CP+SLE M DPV + +GQTYE++ I +W +LG CP T Q L ++ PN T+ LI
Sbjct: 234 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALI 293
Query: 129 HTW 131
W
Sbjct: 294 ANW 296
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 135/290 (46%), Gaps = 23/290 (7%)
Query: 145 DVQGRASELVETLKKVKGQARVQALKELHHVVAAHGTARKTVIDEGGVSVMSSLLGPFTS 204
+V+ + +LVE LK + QA EL ++A H + VI G V+ L T
Sbjct: 538 EVETQVKKLVEELKSSSLDTQRQATAELR-LLAKHNMDNRIVIGNSGAIVLLVELLYSTD 596
Query: 205 HAVGSEVIGILVSLTLDSESKRNLTQPAKISLMVDILNEGSIETKINCTRLIESL--IEE 262
A + L++L+++ +K+ + I ++ +L GS E K N + SL IEE
Sbjct: 597 SATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEE 656
Query: 263 KDFRSEIISSHSLLVGLMRLVKDKRHSNGISPGLSLLRTVCF----YKEVRILLVSIGAV 318
+ + LV L+ NG G T F ++E + ++V GAV
Sbjct: 657 NKIKIGQSGAIGPLVDLL--------GNGTPRGKKDAATALFNLSIHQENKAMIVQSGAV 708
Query: 319 SQLVELLSGLDPDC--LELALSVLDSLASIPEGRVALKDCSNTIPIMVRLLMRISESCTQ 376
L++L+ DP ++ A++VL +LA+IPEGR A+ IP++V ++ S +
Sbjct: 709 RYLIDLM---DPAAGMVDKAVAVLANLATIPEGRNAIGQ-EGGIPLLVEVVELGSARGKE 764
Query: 377 YALSILWSVCKLAPEECSLIAVDAGLAAKLLLVIQSGCNPLLKQQSAELL 426
A + L + + C+++ + G L+ + QSG P ++++ LL
Sbjct: 765 NAAAALLQLSTNSGRFCNMV-LQEGAVPPLVALSQSGT-PRAREKAQALL 812
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 65 VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTL 124
VPS F C +SLE M DPV + +GQT+ER I KW ++G CP T Q L ++TPN +
Sbjct: 240 VPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIV 299
Query: 125 YRLIHTW 131
+ +W
Sbjct: 300 RAFLASW 306
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 65 VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTL 124
+P F CP+S E M DPV + +GQT++R++I KW + G CP T Q L + PN T+
Sbjct: 202 IPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTV 261
Query: 125 YRLIHTWF 132
+I +W
Sbjct: 262 KAMIASWL 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 12/278 (4%)
Query: 152 ELVETLKKVKGQARVQALKELHHVVAAHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSE- 210
+LVE LK + + A E+ H+ R + G ++ + SLL ++ + E
Sbjct: 440 KLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLL--YSEEKLTQEH 497
Query: 211 VIGILVSLTLDSESKRNLTQPAKISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEII 270
+ L++L++ +K + + I +V +LN G+ K N + SL + R I
Sbjct: 498 AVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIG 557
Query: 271 SSHSLLVGLMRLVKDKRHSNGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDP 330
S++ + L+ L+ K G S L + + + +V AV LVELL DP
Sbjct: 558 QSNAAIQALVNLL-GKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL---DP 613
Query: 331 D--CLELALSVLDSLASIPEGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKL 388
D ++ A+++L +L+++ EGR A+ IP++V + S+ + A S+L +C
Sbjct: 614 DLEMVDKAVALLANLSAVGEGRQAIVR-EGGIPLLVETVDLGSQRGKENAASVLLQLCLN 672
Query: 389 APEECSLIAVDAGLAAKLLLVIQSGCNPLLKQQSAELL 426
+P+ C+L+ + G L+ + QSG K+++ +LL
Sbjct: 673 SPKFCTLV-LQEGAIPPLVALSQSGTQR-AKEKAQQLL 708
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 65 VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTL 124
+P F CP+S E M DPV + +GQT++R++I KW + G CP T Q L + PN T+
Sbjct: 238 IPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTV 297
Query: 125 YRLIHTWF 132
+I +W
Sbjct: 298 KAMIASWL 305
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 12/278 (4%)
Query: 152 ELVETLKKVKGQARVQALKELHHVVAAHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSE- 210
+LVE LK + + A E+ H+ R + G ++ + SLL ++ + E
Sbjct: 476 KLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLL--YSEEKLTQEH 533
Query: 211 VIGILVSLTLDSESKRNLTQPAKISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEII 270
+ L++L++ +K + + I +V +LN G+ K N + SL + R I
Sbjct: 534 AVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIG 593
Query: 271 SSHSLLVGLMRLVKDKRHSNGISPGLSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDP 330
S++ + L+ L+ K G S L + + + +V AV LVELL DP
Sbjct: 594 QSNAAIQALVNLL-GKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL---DP 649
Query: 331 DC--LELALSVLDSLASIPEGRVALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKL 388
D ++ A+++L +L+++ EGR A+ IP++V + S+ + A S+L +C
Sbjct: 650 DLEMVDKAVALLANLSAVGEGRQAIVR-EGGIPLLVETVDLGSQRGKENAASVLLQLCLN 708
Query: 389 APEECSLIAVDAGLAAKLLLVIQSGCNPLLKQQSAELL 426
+P+ C+L+ + G L+ + QSG K+++ +LL
Sbjct: 709 SPKFCTLV-LQEGAIPPLVALSQSGTQR-AKEKAQQLL 744
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 15/280 (5%)
Query: 50 KLDLANMIQEMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGH-FTCPT 108
K++ N ++ EVP FIC +S + M +P+ + +GQT+E+S IL+W L H TCP
Sbjct: 50 KIESKNPESDISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEW--LKHERTCPR 107
Query: 109 TMQELWDDSITPNTTLYRLIHTW-FSQKYMLMKKRSEDVQGRASELVETLKKVKGQARVQ 167
T Q L+ + PN + +I W + K E + +L L+++ + V+
Sbjct: 108 TKQVLYHRFMIPNHLINEVIKEWCLIHNFDRPKTSDEVIDLFTGDLESLLQRISSPSSVE 167
Query: 168 ALKELHHVVAAHGTARKTVIDEGGVSV---MSSLLGPFT-SHAVGSEVI-GILVSLTLDS 222
E +A +V + ++ LL P + S E + I+ +L + S
Sbjct: 168 DQTEAAKELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIFS 227
Query: 223 ESKRNLT----QPAKISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIISSHSLLVG 278
S++N T P + L+ + +G++ T+I+ + SL D II + +L
Sbjct: 228 TSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSL-SYTDSNKIIIGNSEVLKA 286
Query: 279 LMRLVKDKRHSNGISPGLSLLRTVCFYKEVRILLVSIGAV 318
L+ ++++ S S S L +C KE+ VS G +
Sbjct: 287 LIHVIEEG-DSLATSEAFSALSNLCPVKEISEKAVSEGLI 325
>AT3G02840.1 | Symbols: | ARM repeat superfamily protein |
chr3:618480-619619 FORWARD LENGTH=379
Length = 379
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 129/262 (49%), Gaps = 15/262 (5%)
Query: 181 TARKTVIDEGGVSVMSSLLGPFTSHAVG-----SEVIGILVS-LTLD-SESKRNLTQPAK 233
T +K ++ G V +SS F + G E++ +L S L L+ SE + A
Sbjct: 90 TNKKCLVQNGSVLALSSCFERFAAARDGHMRLLEEILFVLSSWLPLNRSEGFNKMGSTAS 149
Query: 234 ISLMVDILNEGSIETKINCTRLIESLIE-EKDFRSEIISSHSLLVGLMRLVKDKRHSNGI 292
++ +V LN +T+ N I +I +K + + GL+++++D ++
Sbjct: 150 LNCLVRFLNGKDAKTRQNAAFCIREVIAVDKRYVYALTDVEGACEGLVKIIRDSVSTSST 209
Query: 293 SPGLSLL-RTVCFYKEVRILLVSIGAVSQLVELL-SGLDPDCLELALSVLDSLASIPEGR 350
L ++ R + ++ V +G V + E++ + + E +L VL++ +G+
Sbjct: 210 KASLMVIYRAISSNDKITEKFVKLGLVELITEMMVNNAEKSVCERSLVVLNATCDNEQGK 269
Query: 351 VALKDCSNTIPIMVRLLMRISESCTQYALSILWSVCKLAPE-ECS----LIAVDAGLAAK 405
+ + +P++V+ ++R+S+ TQ ++SILW + K + EC + A+ G K
Sbjct: 270 EDVLRNALIVPLLVKKILRVSDLATQCSVSILWKLWKNKKDGECDDRLLVEALQVGAFEK 329
Query: 406 LLLVIQSGCNPLLKQQSAELLK 427
LL+++Q GC K++++ELL+
Sbjct: 330 LLVLLQVGCEDKTKEKASELLR 351
>AT5G65500.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:26181093-26183997 REVERSE
LENGTH=791
Length = 791
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 64 EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTT 123
++PSVF+CPI E M++P G +YE I +W ++GH T P T L +TPN T
Sbjct: 714 DIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHT 773
Query: 124 LYRLIHTWFSQK 135
L LI W S++
Sbjct: 774 LRSLIQDWHSKR 785
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 34/72 (47%)
Query: 61 ELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITP 120
E E P FICPISLE M+DP G TYE I W GH T P T +L + P
Sbjct: 321 EHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVP 380
Query: 121 NTTLYRLIHTWF 132
N L I W
Sbjct: 381 NLALRSAIQEWL 392
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 66 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLY 125
PS FICPIS E M++P G TYE ++ +W + GH T P T +L +++ PN L
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 126 RLIHTWFSQ 134
I W +
Sbjct: 558 SAIQEWLQR 566
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 17/130 (13%)
Query: 65 VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTL 124
+P F C +S M DPV + +G T+ER I KWF+ G+ +CP + ++L D ++ PN L
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVEL 278
Query: 125 YRLIHTWFSQKYMLMKKRSEDVQGRASELVETLKKVKGQARVQALKELHHVVAAHGTARK 184
I W ++ + DVQ A K VK + + +A+ G++
Sbjct: 279 KSQISEWCAKNGL-------DVQDPAR------KHVKASNSI----DFSVSIASFGSSLY 321
Query: 185 TVIDEGGVSV 194
+ D G+S+
Sbjct: 322 NIPDHSGISI 331
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 35/237 (14%)
Query: 64 EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTT 123
EVP F C +S M DPV + +GQTYE+ I +W N TCPT Q L+ +TPN
Sbjct: 73 EVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN-HDLTCPTAKQVLYRVCLTPNHL 131
Query: 124 LYRLIHTW-FSQKYMLMKKRSEDVQGRASEL----VET-LKKVKGQA-----RVQALKEL 172
+ LI W + KY + D+ +EL +E+ L+++ + + +A KEL
Sbjct: 132 INELITRWCLANKYDRPAPKPSDID-YVTELFTDGIESLLQRISSPSSSVADQTEAAKEL 190
Query: 173 HHVVAAHGTARKTVIDEGGVSVMSSLLGPFTSHAVGSEVI-------GILVSLTLDSESK 225
R I E S+ + LL P + +G EV I+ +L S +
Sbjct: 191 ALQTEKFVNVRDFFIKELPDSI-TRLLTPLS--VLGDEVDSNPELQENIVTALFNMSTFE 247
Query: 226 RNLTQPAK----ISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIISSHSLLVG 278
+N T A+ I L+ + +GS+ T+ N T + SL + I S+ +++G
Sbjct: 248 KNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSD--------IDSNKIIIG 296
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%)
Query: 64 EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTT 123
E P FICPI+ + M+DP G TYE I +WF GH T P + L S+ PN
Sbjct: 352 EPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLA 411
Query: 124 LYRLIHTWFSQKYMLMK 140
L I W + +L +
Sbjct: 412 LRSAIQEWLQLRELLNR 428
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 27/237 (11%)
Query: 64 EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGH-FTCPTTMQELWDDSITPNT 122
EVP FIC +S M +PV + +GQTYE+ I +W L H TCP T Q L PN
Sbjct: 71 EVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEW--LKHERTCPKTKQVLSHRLWIPNH 128
Query: 123 TLYRLIHTW-FSQKYMLMKKRSEDVQGRASELVET-LKKVKGQA----RVQALKELHHVV 176
+ LI W KY K E V + +E L++V + +++A KEL H
Sbjct: 129 LISDLITQWCLVNKYDHQKPSDELVAELFTSDIEALLQRVSSSSSVADQIEAAKELRHQT 188
Query: 177 AAHGTARKTVIDEGGVSVMSSLLGPFTS--HAVGS------EVIGILVSLTLDSESKRNL 228
R + G ++ LL P ++ AV S ++ L +L++ +K +
Sbjct: 189 KKFPNVRVFFV-AGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLSILESNKTVI 247
Query: 229 TQPA-KISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIISSHSLLVGLMRLVK 284
+ I L+ L +G+ ET+ N + SL I S+ +++G VK
Sbjct: 248 AENCLVIPLLTKSLKQGTDETRRNAAATLSSL--------SAIDSNKIIIGNSEAVK 296
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 69 FICPISLEPMQDPVTLCTGQTYERSNILKWF-----NLGHFTCPTTMQELWDDSITPNTT 123
FICP++ + M +PVTL GQT+ER I KWF N +CP T +EL ++P+
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSIA 88
Query: 124 LYRLIHTWFSQKYML 138
L I W ++ L
Sbjct: 89 LRNTIEEWRARNDAL 103
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 69 FICPISLEPMQDPVTLCTGQTYERSNILKWF-----NLGHFTCPTTMQELWDDSITPNTT 123
FICP++ + M +PVTL GQT+ER I KWF N +CP T +EL ++P+
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSIA 88
Query: 124 LYRLIHTWFSQKYML 138
L I W ++ L
Sbjct: 89 LRNTIEEWRARNDAL 103
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 69 FICPISLEPMQDPVTLCTGQTYERSNILKWF----NLGH-FTCPTTMQELWDDSITPNTT 123
FICP++ E M DPVTL G+T+ER I KWF + G +CP T QEL ++ +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 124 LYRLIHTWFSQK 135
L I W S+
Sbjct: 87 LRNTIEEWRSRN 98
>AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |
chr1:20960356-20962334 REVERSE LENGTH=485
Length = 485
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 58 QEMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDS 117
++ME + PS F CPI+ E M+DP G TYE +I KW + GH T P T L +
Sbjct: 411 EQMEKRQPPSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLT 470
Query: 118 ITPNTTL 124
+ PN L
Sbjct: 471 LVPNRAL 477
>AT3G49060.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187054-18191878 REVERSE
LENGTH=795
Length = 795
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 66 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLY 125
PS ++CPI E M+DP+ G TYE I +W GH T P T ++ D ++ PN L+
Sbjct: 726 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 785
Query: 126 RLIHTWFSQ 134
I W +Q
Sbjct: 786 LAIQDWQNQ 794
>AT3G49060.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187386-18191878 REVERSE
LENGTH=805
Length = 805
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 66 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLY 125
PS ++CPI E M+DP+ G TYE I +W GH T P T ++ D ++ PN L+
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 126 RLIHTWFSQ 134
I W +Q
Sbjct: 796 LAIQDWQNQ 804
>AT1G01670.1 | Symbols: | RING/U-box superfamily protein |
chr1:242943-245163 REVERSE LENGTH=365
Length = 365
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 33/71 (46%)
Query: 64 EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTT 123
E P FICPIS + MQ+P G TYE +W N G P T L + ++ PN
Sbjct: 293 EPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNLV 352
Query: 124 LYRLIHTWFSQ 134
L I W Q
Sbjct: 353 LRSAIKDWLQQ 363
>AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25922001-25925374 REVERSE LENGTH=1033
Length = 1033
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 53 LANMIQEMELCEVP-SVFICPISLEPMQDPVTLCTGQTYERSNILKWF----NLGHFTCP 107
L+ + Q + E P FICP++ E M+DPVT TG T ER +++WF N CP
Sbjct: 233 LSMLPQVTQFMEPPYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCP 292
Query: 108 TTMQELWDDSITPNTTLYRLIHTW 131
T Q+L + ++ N L +I W
Sbjct: 293 VTGQKLTTE-LSANVVLKTIIQEW 315
>AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1035
Length = 1035
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 53 LANMIQEMELCEVP-SVFICPISLEPMQDPVTLCTGQTYERSNILKWF----NLGHFTCP 107
L+ + Q + E P FICP++ E M+DPVT TG T ER +++WF N CP
Sbjct: 233 LSMLPQVTQFMEPPYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCP 292
Query: 108 TTMQELWDDSITPNTTLYRLIHTW 131
T Q+L + ++ N L +I W
Sbjct: 293 VTGQKLTTE-LSANVVLKTIIQEW 315
>AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1061
Length = 1061
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 53 LANMIQEMELCEVP-SVFICPISLEPMQDPVTLCTGQTYERSNILKWF----NLGHFTCP 107
L+ + Q + E P FICP++ E M+DPVT TG T ER +++WF N CP
Sbjct: 233 LSMLPQVTQFMEPPYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCP 292
Query: 108 TTMQELWDDSITPNTTLYRLIHTW 131
T Q+L + ++ N L +I W
Sbjct: 293 VTGQKLTTE-LSANVVLKTIIQEW 315
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 69 FICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLYRLI 128
F CPIS+E M+DP G TYE KW G T P T + L + ++ PN TL +I
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIII 296
Query: 129 HTWFSQ 134
W +
Sbjct: 297 KDWLEK 302
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 33/76 (43%)
Query: 59 EMELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSI 118
E P+ + CPI E M+DP G TYER I +W P T L +
Sbjct: 702 EQANARAPTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDL 761
Query: 119 TPNTTLYRLIHTWFSQ 134
TPN TL I W S+
Sbjct: 762 TPNHTLRSAIREWRSR 777
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 65 VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTL 124
PS + CPI E M++P G TYER IL W H P T Q+L +TPN TL
Sbjct: 725 APSHYFCPILREIMEEPEIAADGFTYERKAILAWLE-KHNISPVTRQKLDHFKLTPNHTL 783
Query: 125 YRLIHTWFSQ 134
I W S+
Sbjct: 784 RSAIRDWKSR 793
>AT2G45910.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:18894520-18898212 FORWARD
LENGTH=834
Length = 834
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 30/70 (42%)
Query: 65 VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTL 124
P FICPI E MQDP G TYE I W + H T P T +L S+ N L
Sbjct: 763 APPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHAL 822
Query: 125 YRLIHTWFSQ 134
I W
Sbjct: 823 RSAIQEWLQH 832
>AT5G11550.1 | Symbols: | ARM repeat superfamily protein |
chr5:3708203-3709147 REVERSE LENGTH=314
Length = 314
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 278 GLMR-LVKDKRHSNGISPG---LSLLRTVCFYKEVRILLVSIGAVSQLVELLSGLDPDCL 333
GLMR LV R +N I +L +C + R + V GA +VE +GL+ +
Sbjct: 141 GLMRGLVSCLRSNNKIVTAKYVTKILLALCLAEGNRHVAVEAGAARAVVETAAGLEISAV 200
Query: 334 ELALSVLDSLASIPEGRVALKDCSNTIPIMVRLLMRISESCTQYALSIL---WSVCKLAP 390
E AL+ L+ + + EG ++ + T+P MV ++ R++ +YA+SIL +
Sbjct: 201 ERALAALELMCTTAEGAAEVRAHAMTVPAMVAVMARLAGRGREYAISILSVVYGKGGEGG 260
Query: 391 EECSLIAVDAG--LAAKLLLVIQSGCNPLLKQQSAELLK 427
+ IAV +A + L ++ C K++ A+LLK
Sbjct: 261 DSGEEIAVAPAEEVARAVALALEGECTARGKRKGAQLLK 299
>AT5G40140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:16057347-16058999 FORWARD
LENGTH=550
Length = 550
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 64 EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTT 123
E+P+ F+CPIS M DP+ + +G +YER+ ++ LG FT PT + ++ PN
Sbjct: 57 EIPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLG-FT-PTPPPDF--STVIPNLA 112
Query: 124 LYRLIHTWFSQK 135
L IH+W ++
Sbjct: 113 LKSAIHSWCERR 124
>AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903360-12906669 REVERSE
LENGTH=835
Length = 835
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 66 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLY 125
P+ FICP+ + M +P G TY+R I +W H T P T L ++ PN TLY
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLK-EHNTSPMTDSPLHSKNLLPNYTLY 825
Query: 126 RLIHTWFSQK 135
I W S +
Sbjct: 826 TAIMEWRSTR 835
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 66 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLY 125
PS F CP+ + M++P G TY+R I +W H T P T L + ++ PN TLY
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHTLY 808
Query: 126 RLIHTW 131
I W
Sbjct: 809 AAIVEW 814