Miyakogusa Predicted Gene

Lj2g3v1968230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1968230.1 tr|G7K2J6|G7K2J6_MEDTR Condensin-2 complex
subunit G2 OS=Medicago truncatula GN=MTR_5g015600 PE=4
SV,73.58,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; seg,NULL; ARM repeat,Armadillo-ty,CUFF.38108.1
         (1243 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G64960.1 | Symbols:  | ARM repeat superfamily protein | chr1:...  1040   0.0  

>AT1G64960.1 | Symbols:  | ARM repeat superfamily protein |
            chr1:24129918-24134049 FORWARD LENGTH=1203
          Length = 1203

 Score = 1040 bits (2688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/1259 (47%), Positives = 791/1259 (62%), Gaps = 75/1259 (5%)

Query: 1    MEKRLRSSLQSSPQEFLSLATTLPLKSSKPSLKTLIHSIKPSSTASSDLPPSLCDSIAAS 60
            MEKRLRSSL++S +EFLS A  L LKSSKPSLKT+I+++KPSS  SS LP +L +SI   
Sbjct: 1    MEKRLRSSLKTSSEEFLSSAVKLTLKSSKPSLKTIINAVKPSSDLSSSLPLALHNSILHH 60

Query: 61   VQSFHNLRD--NNPST--------PPTKRLRRSSRHSKTPSKPHPDEKDEKQKLLERLEI 110
             +SF  L D  NN +T        PPTKR R +     T + P  D    K ++L  L+I
Sbjct: 61   TESFQKLLDEVNNNNTYIPSPSNSPPTKRHRGT-----TGTSPDSDLDQRKHQILASLQI 115

Query: 111  LANIALLCVSHPGKAFSPSDLLPGVQALHNNLIVFESDLALSSVIEGLCEEWWKENLPDR 170
            L+ +  LC+ +P  AF  SDLLP  QALHNNL +FESD  L   I G+CE WWKE L  R
Sbjct: 116  LSYVLHLCLLNPKNAFPTSDLLPAAQALHNNLRLFESDSVLCLEIAGVCECWWKEGLVGR 175

Query: 171  ETLISQTLPFLLSRSLTLKKKVDVHRVCVLREAFALFDFEDESIEDLRLLLVRSVISPLY 230
            E+LISQ+LPFLLSRSLTLKKKVDVHRV +LREAF LFDFEDESIEDLR+LL+R V+SPLY
Sbjct: 176  ESLISQSLPFLLSRSLTLKKKVDVHRVYMLREAFTLFDFEDESIEDLRMLLMRCVVSPLY 235

Query: 231  LKTEDGRRFLSFIFGLSSQLGKEMLAMIRSQIPFGRKSMLEAYGDILFRAWKAAPEDSRV 290
            +KTEDG+RF+SF FGLS QL K  LA++++QIP G KS+LE +G ILFRAWK    D + 
Sbjct: 236  VKTEDGQRFVSFAFGLSRQLMKSGLAVVKAQIPLGSKSVLEGFGGILFRAWKEVELDLKG 295

Query: 291  EFENGFLQDLIEGAIHACSGAFASYIRRVFGAFINQRTTDGVEKLLYRLAEPIIFRSLQV 350
            E E+GFLQ +I+ AIHA S AFA+ +RRV G FI+QRT+ GVEKLL+ LAEP+IFRSLQV
Sbjct: 296  EIEDGFLQGIIDSAIHASSSAFAASLRRVLGGFISQRTSQGVEKLLFTLAEPMIFRSLQV 355

Query: 351  ANSNVRQNALHLLLDMFPLEDPDATKEEKDILLDKQFFLLERLLTDDCPEVRTIAVEGSC 410
            ANSNVR NALHLLLD+FP+EDPDATKE KD LLDKQF+LLE+LL+D+CP+VR++AVEG  
Sbjct: 356  ANSNVRLNALHLLLDLFPMEDPDATKEAKDTLLDKQFYLLEKLLSDECPDVRSVAVEGLS 415

Query: 411  RVLHLFWEIIPSPIITKILTKLFDDMSKDACNEVRLSMLKGIIYLLDNPHSHEILKVLLP 470
            RV +LFWE+IPS  ITK+LTK+FDDMS ++C+EVRLS + GI YLL NP SH ILKV+LP
Sbjct: 416  RVFYLFWEVIPSATITKVLTKIFDDMSHESCSEVRLSTVNGITYLLANPQSHGILKVILP 475

Query: 471  RLGHLMVDNALTVRVAAADLLLHLKDVRNYQFNKVVXXXXXXXXXANDQPPVAQKITKLL 530
            RLGHLM+D+  +VRVA  DLLL ++DVR +QFN VV         A+DQ  VA+ I +LL
Sbjct: 476  RLGHLMLDSVTSVRVAMVDLLLLIRDVRAFQFNTVVSLDVLLSVLASDQTHVAKGIARLL 535

Query: 531  MPSYFPSKVPMEEACNRCITLVRRAPMAGARFCQFAILEGASKTHXXXXXXXXXXXXXSM 590
            +PSYFPS+   EEAC RC TL+ R P AGARFC+F +  GA+                S 
Sbjct: 536  IPSYFPSRKRAEEACQRCRTLINRNPKAGARFCEFLVSLGATVKSVLHLVGFFLNSVLSG 595

Query: 591  DNMEENQIEGFLVAASYLCDNLACEPSYINGLKELLTAEKVKGLLTVVSSKAQAQSSLFN 650
            D + ENQ EG L AA YLC +L  +   +  LKELL  EK+K LL    + AQAQSS+ +
Sbjct: 596  DKLLENQTEGLLRAAYYLCKDLVADSGCMASLKELLPGEKLKSLLAFAPT-AQAQSSVID 654

Query: 651  ILSIVCPNDVNELLEKCLAVVTNCSGLPEDVDRHSEMRSSHKLLLSLGGFDEMFESLTAL 710
            I+++V P+ V+E+LE C+ +V NC GLP D  R +E+RS HKLLLS   F ++  + T++
Sbjct: 655  IITMVSPDIVSEVLEDCMNLVVNCGGLPSDAGRQTELRSVHKLLLSSNAFCDLIGTFTSI 714

Query: 711  LHKAAYRCHFKFGTDMPSHSVSFGTXXXXXXXXXXXX--XXXXXXXXXXFEDDYLLAVGA 768
            + K AYRC   FG ++   ++                            FE+DYL+AVG 
Sbjct: 715  MQKTAYRCQINFGYEVERKNLQSMKRKKSKSSGKSSVRWKHVSGKNAISFEEDYLVAVGI 774

Query: 769  AWQVRDLFLHDDTRKAILRSQPLEMLFFSLKVVSEVSIVHSGHYEYMDISPVLAYITLAL 828
            AWQ++DL   +D RK+IL S  +E L  SLKVVS  SI+ +   EYMD++P         
Sbjct: 775  AWQIKDLLTTEDARKSILESD-IEELLLSLKVVSHTSILQATCCEYMDVNP--------- 824

Query: 829  QMAVDNVDTGSIKNHGSTRKKHKVDSSALLSETVLQLTIEHMLSCLEKLFGADNIIQDHN 888
                                             ++  T++H+L C ++LF A +I     
Sbjct: 825  --------------------------------DIMDQTMDHILVCTDELFQAGDIGTPGT 852

Query: 889  EDPD-NL-QSTNGKNKTSAKRRKLSATNACHRSSGGSEFKEPQLVFCKVKMLTAVLKFMA 946
              P+ NL +     N    KRR  +A +        SE  +   V  KVKMLTA+ KF  
Sbjct: 853  TSPEANLSKKPTTSNGNQPKRRNRNARD------DASEGSKEGGVLNKVKMLTAIFKFFV 906

Query: 947  DTTAMCFAPDNHGLFLDYTSRCVHDMVSSLDRLSHSQIQLREEDKKKNILCLKSSFTYAA 1006
            ++T M  A +       ++S  +  ++S  +  S  +++  + D K+ ILC KSS +YA 
Sbjct: 907  ESTEMGLASNFQASMFKFSSAYLKYVISIFNDHSTGKLEFEDADMKEMILCTKSSTSYAG 966

Query: 1007 KILNMILTDSSGSSTTPPQAFTLANNLLDLIISIESYMGSGYASRLVAAAKPWLPDVVLA 1066
            K +N+++  ++ +S    ++F LAN+LLDL   +E  +GS YASR+V+A  PW+PD+VLA
Sbjct: 967  KFINLVMRHATEASRPLFESFDLANDLLDLFTMVEKSLGSAYASRIVSALNPWIPDLVLA 1026

Query: 1067 LGSASILQDPDIGREHLTPSEQMKQQFPKWPLIVAQTELSGPNEAEENDESPQQEKFSAF 1126
            LG   I  D +    + +    +K  FP W L  A+ EL   N+ +  + S     F A 
Sbjct: 1027 LGPCFINNDSE-ESSYTSSFNHIKLCFPSWLLTCAKIELHEINKEDVTETS----GFLAL 1081

Query: 1127 NKLLGMLIVLLKKNPDIMDAVGVIFLGSSLVGLEQKDSGLALGLLQFVCSKLFKDDDKNW 1186
             KL   +  L+K N  ++DA+G + L    V +E++D   ALGLL  VC KL   +D+ W
Sbjct: 1082 KKLRNTIFTLVKGNTKVLDAIGYVLLLCLAVCIEKRDYSTALGLLHLVCVKLVGSEDREW 1141

Query: 1187 G--DMMLSSLEEIYHKIEREIAEENDDDKLGKLLRAKELLEPLWTYHLYETGRFTMTDD 1243
               D ML  L  IY  IEREI E  D+D++  L  A+ELL+P+W YH+YETGRF M D+
Sbjct: 1142 KELDTMLVLLPRIYPIIEREIGEGRDEDEVKTLEAARELLQPVWMYHVYETGRFHMMDE 1200