Miyakogusa Predicted Gene

Lj2g3v1644320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1644320.1 Non Chatacterized Hit- tr|D8SQR8|D8SQR8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.97,3e-19,NUCLEOPORIN-RELATED,NULL; Dirigent,Plant disease
resistance response protein,CUFF.37568.1
         (179 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42510.1 | Symbols:  | Disease resistance-responsive (dirigen...    53   9e-08
AT5G42500.1 | Symbols:  | Disease resistance-responsive (dirigen...    52   3e-07
AT1G22900.1 | Symbols:  | Disease resistance-responsive (dirigen...    50   7e-07

>AT5G42510.1 | Symbols:  | Disease resistance-responsive
           (dirigent-like protein) family protein |
           chr5:16998268-16998816 REVERSE LENGTH=182
          Length = 182

 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 7/158 (4%)

Query: 17  TIPFEGTNGSNLKSLHFSLFQHETINKTAYGIVNGVEGSGFTDTTAPFGTLAVFQDSLTV 76
           T P++G        LHF  + H+ I+      V   E    T     FG + +  D LT 
Sbjct: 28  TTPYQGYKPEKFTHLHF--YFHDVISGDKPTAVKVAEARPTTTLNVKFGVIMIADDPLTE 85

Query: 77  TANRSSKLVGIAEGTAITSSLDGLRCISIAKLTLRLKNHRGSVSIVGGTNN--AKPSDHP 134
             + SSK VG A+G   ++++  +    +           GS   V G N+  +K  + P
Sbjct: 86  GPDPSSKEVGRAQGMYASTAMKDIVFTMVFNYVFTAGEFNGSTIAVYGRNDIFSKVRELP 145

Query: 135 VVGGTEDFLFVQGYITTSPVDVKGVSVVYKIEFHLY-W 171
           ++GGT  F F +GY       + G+  V  +E++++ W
Sbjct: 146 IIGGTGAFRFARGYALPKTYKIVGLDAV--VEYNVFIW 181


>AT5G42500.1 | Symbols:  | Disease resistance-responsive
           (dirigent-like protein) family protein |
           chr5:16994359-16994916 REVERSE LENGTH=185
          Length = 185

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 7/158 (4%)

Query: 17  TIPFEGTNGSNLKSLHFSLFQHETINKTAYGIVNGVEGSGFTDTTAPFGTLAVFQDSLTV 76
           T P +G        LHF  + H+ I+      V   E      +   FG + +  D LT 
Sbjct: 31  TKPCQGYKPDKFTHLHF--YFHDVISGDKPTAVKVAEARRTNSSNVNFGVIMIADDPLTE 88

Query: 77  TANRSSKLVGIAEGTAITSSLDGLRCISIAKLTLRLKNHRGSVSIVGGTNN--AKPSDHP 134
             + SSK VG A+G    +++  +    +  L        GS   + G N   +K  + P
Sbjct: 89  GPDPSSKEVGRAQGMYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMP 148

Query: 135 VVGGTEDFLFVQGYITTSPVDVKGVSVVYKIEFHLY-W 171
           ++GGT  F F +GY       V G+  V  +E++++ W
Sbjct: 149 IIGGTGAFRFARGYAQAKTYKVVGLDAV--VEYNVFIW 184


>AT1G22900.1 | Symbols:  | Disease resistance-responsive
           (dirigent-like protein) family protein |
           chr1:8103910-8104491 REVERSE LENGTH=193
          Length = 193

 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 7/158 (4%)

Query: 17  TIPFEGTNGSNLKSLHFSLFQHETINKTAYGIVNGVEGSGFTDTTAPFGTLAVFQDSLTV 76
           T PF+G     L  LHF  + H+ I+      +   E  G   +   FG + +    +T 
Sbjct: 39  TTPFQGNKPDKLTHLHF--YFHDIISGDKPTTIRVAEAPGTNSSATVFGAVLIVDAPVTE 96

Query: 77  TANRSSKLVGIAEGTAITSSLDGLRCISIAKLTLRLKNHRGSVSIVGGTNNA--KPSDHP 134
               SSK VG A+G   ++ +       +           GS + + G N    +  + P
Sbjct: 97  GPELSSKEVGRAQGLYASTDMKTFGFTMVFNFVFTEGEFNGSTAALYGRNPILLEERELP 156

Query: 135 VVGGTEDFLFVQGYITTSPVDVKGVSVVYKIEFHLY-W 171
           ++GGT DF F +GY    P   K V++   +E++++ W
Sbjct: 157 IIGGTGDFRFARGY--ALPKTYKVVNIDAVVEYNVFIW 192