Miyakogusa Predicted Gene

Lj2g3v1560890.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1560890.1 tr|Q67V32|Q67V32_ORYSJ NAM-like protein OS=Oryza
sativa subsp. japonica GN=OSJNBa0019I19.23 PE=4
SV=,29.17,2e-18,seg,NULL; NAM-associated,NULL;
coiled-coil,NULL,CUFF.37508.1
         (493 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G41220.1 | Symbols: ATGSTT3, GST10C, GSTT3 | glutathione S-tr...    87   4e-17
AT3G47680.1 | Symbols:  | DNA binding | chr3:17577483-17578391 R...    86   9e-17
AT5G41240.1 | Symbols: ATGSTT2, GST10B, GSTT2 | glutathione S-tr...    75   9e-14
AT1G66235.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    57   3e-08

>AT5G41220.1 | Symbols: ATGSTT3, GST10C, GSTT3 | glutathione
           S-transferase THETA 3 | chr5:16494560-16496969 REVERSE
           LENGTH=590
          Length = 590

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 1/137 (0%)

Query: 210 KKRTRWRVKDDLLLVQSWLNISKDPTVGTDQTAAKFWDRIRDQFDEYRDF-DTPPRTGKM 268
           K R +W   +D +L+ +WLN SKDP V  +  A  FW RI   F+      + P R    
Sbjct: 268 KHRRKWSRAEDAILISAWLNTSKDPIVDNEHKACAFWKRIGAYFNNSASLANLPKREPSH 327

Query: 269 LKCRFGKLSKDIQFFTGCYNKVTTPWKSGHSEKDIMAEAHALFQVDHKKDFTHENVWRMV 328
            K R+ KL+  +  F GCY++      SG SE D+   A+ ++  ++K +FT E+ WR +
Sbjct: 328 CKQRWSKLNDKVCKFVGCYDQALNQRSSGQSEDDVFQVAYQVYTNNYKSNFTLEHAWREL 387

Query: 329 KDEPKWKGQSMKTNSRG 345
           +   KW       NS+G
Sbjct: 388 RHSKKWCSLYPFENSKG 404


>AT3G47680.1 | Symbols:  | DNA binding | chr3:17577483-17578391
           REVERSE LENGTH=302
          Length = 302

 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 210 KKRTRWRVKDDLLLVQSWLNISKDPTVGTDQTAAKFWDRIRDQFDEYRDFD-TPPRTGKM 268
           ++R +W   +DL+LV +WLN SKD  +G +Q    FW RI   +      +    R    
Sbjct: 45  RERRKWSAGEDLVLVSAWLNTSKDAVIGNEQKGYAFWSRIAAYYGASPKLNGVEKRETGH 104

Query: 269 LKCRFGKLSKDIQFFTGCYNKVTTPWKSGHSEKDIMAEAHALFQVDHKKDFTHENVWRMV 328
           +K R+ K+++ +  F G Y   T    SG ++ D++A AH ++  +H K FT E+ WR++
Sbjct: 105 IKQRWTKINEGVGKFVGSYEAATKQKSSGQNDDDVVALAHEIYNSEHGK-FTLEHAWRVL 163

Query: 329 KDEPKW 334
           + E KW
Sbjct: 164 RFEQKW 169


>AT5G41240.1 | Symbols: ATGSTT2, GST10B, GSTT2 | glutathione
           S-transferase THETA 2 | chr5:16498293-16500811 REVERSE
           LENGTH=591
          Length = 591

 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)

Query: 211 KRTRWRVKDDLLLVQSWLNISKDPTVGT--DQTAAKFWDRIRDQFDEYRDF-DTPPRTGK 267
           +R +W   DD++L+ +WLN SKD  V    +Q A  FW RI           + P R   
Sbjct: 269 RRRKWSPPDDVILISAWLNTSKDRKVVVYDEQQAHTFWKRIGAHVSNSASLANLPKREWN 328

Query: 268 MLKCRFGKLSKDIQFFTGCYNKVTTPWKSGHSEKDIMAEAHALFQVDHKKDFTHENVWRM 327
             + R+ K++  +  F GCY++      SG SE D+   A+ L+  ++  +F  E+ WR 
Sbjct: 329 HCRQRWRKINDYVCKFVGCYDQALNQRASGQSEDDVFQVAYQLYYNNYMSNFKLEHAWRE 388

Query: 328 VKDEPKWKGQSMKTNSRG------QKKSGAGADGTSTDPSA 362
           ++   KW       NS+G       K +G G   +S +P +
Sbjct: 389 LRHNKKWCSTYTSENSKGGGSSKRTKLNGGGVYSSSCNPES 429


>AT1G66235.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G24380.1); Has 283 Blast hits to 282 proteins
           in 34 species: Archae - 0; Bacteria - 19; Metazoa - 15;
           Fungi - 0; Plants - 234; Viruses - 0; Other Eukaryotes -
           15 (source: NCBI BLink). | chr1:24683006-24683874
           REVERSE LENGTH=265
          Length = 265

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 2/110 (1%)

Query: 228 LNISKDPTVGTDQTAAKFWDRIRDQFDEYRDFDTPPRTGKMLKCRFGKLSKDIQFFTGCY 287
           ++IS+DP +G  Q++  FWDR+ + F+  ++     R+ K L+CR   + K  +    C 
Sbjct: 1   MDISQDPIIGVYQSSDHFWDRVAESFENRKNPTWSKRSKKSLQCRLQTIEKASKKLHACI 60

Query: 288 NKVTTPWKSGHSEKDIMAEAHALFQVDH--KKDFTHENVWRMVKDEPKWK 335
                   SG S  DI  +A  +   D   K  +  ++VW ++++  K+K
Sbjct: 61  KLCENRRSSGASSDDIFNQAKEMLMQDKHFKSGWKFDHVWNIIRNFEKFK 110