Miyakogusa Predicted Gene
- Lj2g3v1549610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1549610.1 tr|I3RZX6|I3RZX6_LOTJA ATP-dependent Clp protease
proteolytic subunit OS=Lotus japonicus PE=2
SV=1,100,0,CLPPROTEASEP,ClpP; CLP_protease,ClpP/TepA;
ClpP/crotonase,NULL; ATP-DEPENDENT CLP PROTEASE PROTEOLYT,CUFF.37397.1
(158 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G45390.1 | Symbols: CLPP4, NCLPP4 | CLP protease P4 | chr5:18... 289 6e-79
AT1G02560.1 | Symbols: CLPP5, NCLPP5, NCLPP1 | nuclear encoded C... 140 4e-34
AT1G66670.1 | Symbols: CLPP3, NCLPP3 | CLP protease proteolytic ... 135 1e-32
AT1G11750.2 | Symbols: CLPP6 | CLP protease proteolytic subunit ... 125 2e-29
AT1G11750.1 | Symbols: CLPP6, NCLPP1, NCLPP6 | CLP protease prot... 124 2e-29
AT5G23140.1 | Symbols: CLPP2, NCLPP7 | nuclear-encoded CLP prote... 117 2e-27
AT4G17040.1 | Symbols: CLPR4 | CLP protease R subunit 4 | chr4:9... 107 3e-24
ATCG00670.1 | Symbols: CLPP1, PCLPP | plastid-encoded CLP P | ch... 97 4e-21
AT1G09130.3 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 91 3e-19
AT1G09130.2 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 91 3e-19
AT1G09130.1 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 91 3e-19
AT1G12410.1 | Symbols: CLPR2, NCLPP2, CLP2 | CLP protease proteo... 91 4e-19
AT1G49970.1 | Symbols: CLPR1, NCLPP5, SVR2 | CLP protease proteo... 79 9e-16
>AT5G45390.1 | Symbols: CLPP4, NCLPP4 | CLP protease P4 |
chr5:18396351-18397586 FORWARD LENGTH=292
Length = 292
Score = 289 bits (739), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 141/158 (89%), Positives = 148/158 (93%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
MAIYD VQLVRADVSTIALGIAASTASIILG GTKGKRFAMPNTRIMIHQPLGGASGQAI
Sbjct: 135 MAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAI 194
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDKES 120
DVEIQAKEVMHNKNNVT II+G T R+FEQV KDIDRDRYMSPIEAVEYG+IDGVID +S
Sbjct: 195 DVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVIDGDS 254
Query: 121 IIPLEPVPERVRSTLNYEEISKDPRKFLTPEIPDDEIY 158
IIPLEPVP+RV+ +NYEEISKDP KFLTPEIPDDEIY
Sbjct: 255 IIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY 292
>AT1G02560.1 | Symbols: CLPP5, NCLPP5, NCLPP1 | nuclear encoded CLP
protease 5 | chr1:538000-539805 FORWARD LENGTH=298
Length = 298
Score = 140 bits (353), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 89/116 (76%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
MAI+D ++ +R DVST+ +G+AAS + +L GTKGKR+++PN+RIMIHQPLGGA G
Sbjct: 170 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 229
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 116
D++IQA E++H+K N+ ++ TG++ E++ +D DRD +MS EA EYG+IDGVI
Sbjct: 230 DIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285
>AT1G66670.1 | Symbols: CLPP3, NCLPP3 | CLP protease proteolytic
subunit 3 | chr1:24863995-24865646 REVERSE LENGTH=309
Length = 309
Score = 135 bits (340), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 87/117 (74%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
M IYDA++ +ADVST+ LG+AAS + +L G+KGKR+ MPN+++MIHQPLG A G+A
Sbjct: 141 MGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKAT 200
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 117
++ I+ +E+M++K + +I S TG+ +++ D DRD +++P EA EYG+ID VID
Sbjct: 201 EMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVID 257
>AT1G11750.2 | Symbols: CLPP6 | CLP protease proteolytic subunit 6 |
chr1:3967609-3969535 FORWARD LENGTH=289
Length = 289
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 81/119 (68%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
+AIYD + ++ V T+A G+AAS +++L GG KG R+AMPNTR+MIHQP G G
Sbjct: 170 LAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVE 229
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDKE 119
DV Q E + + + R+ + FTG+ E+VQ+ +RDR++S EA+E+G+IDG+++ E
Sbjct: 230 DVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLETE 288
>AT1G11750.1 | Symbols: CLPP6, NCLPP1, NCLPP6 | CLP protease
proteolytic subunit 6 | chr1:3967609-3969535 FORWARD
LENGTH=271
Length = 271
Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 81/119 (68%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
+AIYD + ++ V T+A G+AAS +++L GG KG R+AMPNTR+MIHQP G G
Sbjct: 152 LAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVE 211
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDKE 119
DV Q E + + + R+ + FTG+ E+VQ+ +RDR++S EA+E+G+IDG+++ E
Sbjct: 212 DVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLETE 270
>AT5G23140.1 | Symbols: CLPP2, NCLPP7 | nuclear-encoded CLP protease
P7 | chr5:7783811-7784826 FORWARD LENGTH=241
Length = 241
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
+AIYD +Q +R+ +STI LG AAS AS++L G KG+R ++PN +MIHQP GG SGQA
Sbjct: 104 LAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAK 163
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDKES 120
D+ I K+++ + + + TG+ + V ++DRD +M+P EA +GIID VID+
Sbjct: 164 DITIHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDER- 222
Query: 121 IIPLEPVPERV 131
PLE V + V
Sbjct: 223 --PLELVKDAV 231
>AT4G17040.1 | Symbols: CLPR4 | CLP protease R subunit 4 |
chr4:9586740-9589297 REVERSE LENGTH=305
Length = 305
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 75/119 (63%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
AIYD + V+ + T+ +G A A+++L G KG R A+P++ IMI QP+ GQA
Sbjct: 169 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQAT 228
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDKE 119
DVEI KE+ H K + ++ S G++ EQ++ D+ R +Y SP EAVEYGIID V+ E
Sbjct: 229 DVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNE 287
>ATCG00670.1 | Symbols: CLPP1, PCLPP | plastid-encoded CLP P |
chrC:69910-71882 REVERSE LENGTH=196
Length = 196
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGG-ASGQA 59
MAIYD +Q VR DV TI +G+AAS AS IL GG KR A P+ R+MIHQP Q
Sbjct: 78 MAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQT 137
Query: 60 IDVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGV 115
+ ++A+E++ + +TR+ TG+ + +D++RD +MS EA +GI+D V
Sbjct: 138 GEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMSATEAQAHGIVDLV 193
>AT1G09130.3 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein | chr1:2939731-2942217
REVERSE LENGTH=370
Length = 370
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASG--Q 58
AIYD++ ++ +V T+ +G A A ++L GTKGKRF MP+ + MI QP +SG
Sbjct: 186 FAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMP 245
Query: 59 AIDVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 116
A DV I+AKEV+ N++ + ++S TG + E V + R YM +A E+G+ID ++
Sbjct: 246 ASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRIL 303
>AT1G09130.2 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein | chr1:2940063-2942217
REVERSE LENGTH=330
Length = 330
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASG--Q 58
AIYD++ ++ +V T+ +G A A ++L GTKGKRF MP+ + MI QP +SG
Sbjct: 186 FAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMP 245
Query: 59 AIDVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 116
A DV I+AKEV+ N++ + ++S TG + E V + R YM +A E+G+ID ++
Sbjct: 246 ASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRIL 303
>AT1G09130.1 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein | chr1:2940063-2942217
REVERSE LENGTH=330
Length = 330
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASG--Q 58
AIYD++ ++ +V T+ +G A A ++L GTKGKRF MP+ + MI QP +SG
Sbjct: 186 FAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMP 245
Query: 59 AIDVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 116
A DV I+AKEV+ N++ + ++S TG + E V + R YM +A E+G+ID ++
Sbjct: 246 ASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRIL 303
>AT1G12410.1 | Symbols: CLPR2, NCLPP2, CLP2 | CLP protease
proteolytic subunit 2 | chr1:4223099-4224954 FORWARD
LENGTH=279
Length = 279
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 74/116 (63%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
+AIYD ++ +++ V T +G+A + A +L G KG RFAMP +RI + P G A GQA
Sbjct: 145 LAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQAD 204
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 116
D++ +AKE+ ++ + ++ TG+ E+V KD+ R + + EA+EYG+ID ++
Sbjct: 205 DIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIV 260
>AT1G49970.1 | Symbols: CLPR1, NCLPP5, SVR2 | CLP protease
proteolytic subunit 1 | chr1:18501936-18504462 REVERSE
LENGTH=387
Length = 387
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 2 AIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQP-LGGASGQAI 60
AI D + ++DV TI G+A A+++L G KG R P++ ++ P + +SG AI
Sbjct: 237 AIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNRSSGAAI 296
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDKE 119
D+ I+AKE+ N +++ TG++ EQ+ +DI R +Y+ A++YGI D + D +
Sbjct: 297 DMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADKIADSQ 355