Miyakogusa Predicted Gene
- Lj2g3v1468540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1468540.1 Non Chatacterized Hit- tr|C0JP19|C0JP19_LOTJA
Putative basic helix-loop-helix protein BHLH22
OS=Lotu,100,0,coiled-coil,NULL; helix loop helix
domain,Helix-loop-helix domain; HLH, helix-loop-helix
DNA-binding,CUFF.37264.1
(604 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 474 e-134
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 452 e-127
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 214 1e-55
AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 | ch... 181 1e-45
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 118 1e-26
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 114 2e-25
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 114 2e-25
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 114 2e-25
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 112 6e-25
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 103 3e-22
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL... 95 2e-19
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-... 82 1e-15
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 82 1e-15
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 82 1e-15
AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bH... 77 3e-14
AT4G00480.2 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bH... 77 3e-14
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL... 76 8e-14
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 70 3e-12
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 70 3e-12
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 70 3e-12
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 70 4e-12
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 9e-12
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 9e-12
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 1e-11
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 1e-11
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 68 2e-11
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 68 2e-11
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 4e-11
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 4e-11
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 4e-11
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 4e-11
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 4e-11
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 5e-11
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 7e-11
AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH) DNA-... 63 6e-10
AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 4e-09
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 6e-09
AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 57 4e-08
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 57 4e-08
AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH) DNA-... 57 5e-08
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 55 2e-07
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 55 2e-07
AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 2e-07
AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 3e-07
AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 54 4e-07
AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 53 5e-07
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 53 7e-07
AT5G53210.1 | Symbols: SPCH | basic helix-loop-helix (bHLH) DNA-... 53 8e-07
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l... 52 9e-07
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l... 52 9e-07
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact... 52 1e-06
AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 1e-06
AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 1e-06
AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 | chr5:1894... 52 1e-06
AT2G40200.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 1e-06
AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH) DNA-b... 52 2e-06
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 52 2e-06
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 474 bits (1221), Expect = e-134, Method: Compositional matrix adjust.
Identities = 295/632 (46%), Positives = 363/632 (57%), Gaps = 91/632 (14%)
Query: 1 MNLWS-DDNSSVMEAFMTSSDLXX-------------XXXXXXXXXXXXXXXXLNQDTLQ 46
MNLW+ DDN+S+MEAFM+SSD+ NQ+TLQ
Sbjct: 10 MNLWTTDDNASMMEAFMSSSDISTLWPPASTTTTTATTETTPTPAMEIPAQAGFNQETLQ 69
Query: 47 QRLQALIEGARETWTYAIFWQPSYDYSGTSLLGWGDGYYKGEEDXXXXXXXXXXXXTSS- 105
QRLQALIEG E WTYAIFWQPSYD+SG S+LGWGDGYYKGEED S+
Sbjct: 70 QRLQALIEGTHEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKANPRRRSSSPPFSTP 129
Query: 106 AEQEHRRKVLRDLNSLISGSSAPASXXXXXXXXXXXXWFFLVSMTQSFVNGGGLAGQAYF 165
A+QE+R+KVLR+LNSLISG AP S WFFLVSMTQSF G GLAG+A+
Sbjct: 130 ADQEYRKKVLRELNSLISGGVAP-SDDAVDEEVTDTEWFFLVSMTQSFACGAGLAGKAFA 188
Query: 166 NSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTELIYQNSDLMNKV 225
VWV+G+D+L+ S CERA+QG +FG+ T+ C+PSANGVVE+GSTE I Q+SDL+NKV
Sbjct: 189 TGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGVVEVGSTEPIRQSSDLINKV 248
Query: 226 KVLFNFSNSNLDXXXXXXXXXXXXAENDPSALWLADP-DPDGRDSVSTVAPTTASVSIPS 284
++LFNF D ENDPS +W+ DP G + AP+++S
Sbjct: 249 RILFNFDGGAGDLSGLNWNLDPDQGENDPS-MWINDPIGTPGSNEPGNGAPSSSS----- 302
Query: 285 HHNNDQSIAKTLQFETPVSSTLTE------TPSAVNLTXXXXXXXXXXXXXXXXEMNFSE 338
Q +K++QFE SST+TE TPS V+ E+NFS
Sbjct: 303 -----QLFSKSIQFENGSSSTITENPNLDPTPSPVH----SQTQNPKFNNTFSRELNFS- 352
Query: 339 YSFDAKNGSSNHQHLKPESGEILSFGD-SKRT-----PNFFSGQSQFVPAVEENNNGKKR 392
+S+ +KP SGEIL+FGD KR+ P+ +SGQ+QF N +KR
Sbjct: 353 --------TSSSTLVKPRSGEILNFGDEGKRSSGNPDPSSYSGQTQF-------ENKRKR 397
Query: 393 SPNSRSSNDDGMLSFTSGVILPSSNLKSSTGGGDSEHSDLEASVVKEADSSRLVXXXXXX 452
S N+D +LSF G+S+HSDLEASVVKE V
Sbjct: 398 ---SMVLNEDKVLSF------------GDKTAGESDHSDLEASVVKE------VAVEKRP 436
Query: 453 XXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITE 512
ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAI+YI E
Sbjct: 437 KKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINE 496
Query: 513 LKTKLQSSESDKTGLQKQFDAMKKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILVE 572
LK+K+ +ES+K ++ Q + +K EL
Sbjct: 497 LKSKVVKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGM---------- 546
Query: 573 DIDVKIIGWDAMIRVQCSKKNHPAAILMAALM 604
+I+VKIIGWDAMIRV+ SK+NHPAA LM+ALM
Sbjct: 547 EIEVKIIGWDAMIRVESSKRNHPAARLMSALM 578
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 279/613 (45%), Positives = 345/613 (56%), Gaps = 105/613 (17%)
Query: 2 NLWS-DDNSSVMEAFMTSSDLXXXXXXXXXXXXXXXXXXLNQDTLQQRLQALIEGARETW 60
NLWS DD++SVMEAF+ +N+D LQQRLQALIEGA E W
Sbjct: 22 NLWSTDDDASVMEAFIGGG---SDHSSLFPPLPPPPLPQVNEDNLQQRLQALIEGANENW 78
Query: 61 TYAIFWQPSYDYSG-------TSLLGWGDGYYKGEEDXXXXXXXXXXXXTSSAEQEHRRK 113
TYA+FWQ S+ ++G T LLGWGDGYYKGEE+ S+AEQEHR++
Sbjct: 79 TYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYKGEEEKSRKKKSNP---ASAAEQEHRKR 135
Query: 114 VLRDLNSLISGSSAPASXXXXXXXXXXXXWFFLVSMTQSFVNGGGLAGQAYFNSTPVWVA 173
V+R+LNSLIS WFFLVSMTQSFV G GL GQA+ NS +W++
Sbjct: 136 VIRELNSLIS-GGVGGGDEAGDEEVTDTEWFFLVSMTQSFVKGTGLPGQAFSNSDTIWLS 194
Query: 174 GADRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTELIYQNSDLMNKVKVLFNFSN 233
G++ LA S+CERARQGQ++G+QT+VCV + NGVVELGS+E+I+Q+SDL++KV FNF+N
Sbjct: 195 GSNALAGSSCERARQGQIYGLQTMVCVATENGVVELGSSEIIHQSSDLVDKVDTFFNFNN 254
Query: 234 SNLDXXXXXXXXXXXXAENDPSALWLADPDPDGRDSVSTVAPTTASVSIPSHHNND-QSI 292
+ ENDP LW++ +P+G DS AP + S N+D Q I
Sbjct: 255 GGGEFGSWAFNLNPDQGENDP-GLWIS--EPNGVDSGLVAAPVMNNGGNDSTSNSDSQPI 311
Query: 293 AKTLQFETPVSSTLTETPSAVNLTXXXXXXXXXXXXXXXXEMNFSEYSFDAKNGSSNHQH 352
+K + + E P+ L +NF KNG N Q
Sbjct: 312 SKL------CNGSSVENPNPKVLKSCEM-------------VNF-------KNGIENGQ- 344
Query: 353 LKPESGEILSFGDSKRTPNFFSGQSQFVPAVEENNNGKKRSPNSRSSNDDGMLSFTSGVI 412
EE+++ KKRSP S+N++GMLSFTS +
Sbjct: 345 -------------------------------EEDSSNKKRSP--VSNNEEGMLSFTS--V 369
Query: 413 LPSSNLKSSTGGGDSEHSDLEASVVKEADSSRLVXX-XXXXXXXXXXXANGREEPLNHVE 471
LP DS HSDLEASV KEA+S+R+V ANGREEPLNHVE
Sbjct: 370 LPC----------DSNHSDLEASVAKEAESNRVVVEPEKKPRKRGRKPANGREEPLNHVE 419
Query: 472 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGLQKQF 531
AERQRREKLNQRFY+LRAVVPNVSKMDKASLLGDAISYI+ELK+KLQ +ESDK LQKQ
Sbjct: 420 AERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQI 479
Query: 532 DAMKKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILVE-DIDVKIIGWDAMIRVQCS 590
D M KE +L+E ++DVKIIGWDAMIR+QCS
Sbjct: 480 DVMNKE------------AGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQCS 527
Query: 591 KKNHPAAILMAAL 603
K+NHP A M AL
Sbjct: 528 KRNHPGAKFMEAL 540
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 165/282 (58%), Gaps = 21/282 (7%)
Query: 3 LWSDDNSSV--MEAFMTSSDLXXXXXXXXXXXXXXXXXXLNQDTLQQRLQALIEGARETW 60
L SDD++S MEAF+ ++ N+DTLQQRLQALIE A E W
Sbjct: 11 LTSDDDASAAAMEAFIGTN---HHSSLFPPPPQQPPQPQFNEDTLQQRLQALIESAGENW 67
Query: 61 TYAIFWQPSYDYS-----GTSLLGWGDGYYKGEEDXXXXXXXXXXXXTSSAEQEHRRKVL 115
TYAIFWQ S+D+ T +LGWGDGYYK T++AEQEHR++V+
Sbjct: 68 TYAIFWQISHDFDSSTGDNTVILGWGDGYYK-----GEEDKEKKKNNTNTAEQEHRKRVI 122
Query: 116 RDLNSLISGSSAPASXXXXXXXXXXXXWFFLVSMTQSFVNGGGLAGQAYFNSTPVWVAGA 175
R+LNSLISG S WFFLVSMTQSFVNG GL G+++ NS +W++G+
Sbjct: 123 RELNSLISGGIG-VSDESNDEEVTDTEWFFLVSMTQSFVNGVGLPGESFLNSRVIWLSGS 181
Query: 176 DRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTELIYQNSDLMNKV----KVLFNF 231
L S CERA QGQ++G++T+VC+ + NGVVELGS+E+I Q+SDLM+KV
Sbjct: 182 GALTGSGCERAGQGQIYGLKTMVCIATQNGVVELGSSEVISQSSDLMHKVNNLFNFNNGG 241
Query: 232 SNSNLDXXXXXXXXXXXXAENDPSALWLADPDPDGRDSVSTV 273
N+ ++ ENDP ALW+++P G +S + V
Sbjct: 242 GNNGVEASSWGFNLNPDQGENDP-ALWISEPTNTGIESPARV 282
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/221 (54%), Positives = 140/221 (63%), Gaps = 23/221 (10%)
Query: 386 NNNGKKRSPNSR-SSNDDGMLSFTSGVILPSSNLKSSTGGGDSEHSDLEASVVKEADSSR 444
N + KKR+ S+ S+ND+GMLSF++ V+ ++N DS+HSDLEASVVKEA
Sbjct: 343 NESSKKRTSVSKGSNNDEGMLSFST-VVRSAAN--------DSDHSDLEASVVKEA---- 389
Query: 445 LVXX--XXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASL 502
+V ANGREEPLNHVEAERQRREKLNQRFY+LRAVVPNVSKMDKASL
Sbjct: 390 IVVEPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASL 449
Query: 503 LGDAISYITELKTKLQSSESDKTGLQKQFDAMKKELXXXXXXXXXXXXXXXXXXXXXXXX 562
LGDAISYI ELK+KLQ +ESDK +QK+ D M KE
Sbjct: 450 LGDAISYINELKSKLQQAESDKEEIQKKLDGMSKE------GNNGKGCGSRAKERKSSNQ 503
Query: 563 XXXXXXILVEDIDVKIIGWDAMIRVQCSKKNHPAAILMAAL 603
I +E IDVKIIGWD MIRVQC KK+HP A M AL
Sbjct: 504 DSTASSIEME-IDVKIIGWDVMIRVQCGKKDHPGARFMEAL 543
>AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 |
chr5:19002719-19004254 FORWARD LENGTH=511
Length = 511
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 120/195 (61%), Gaps = 7/195 (3%)
Query: 42 QDTLQQRLQALIEGARETWTYAIFWQPSYD-YSGTSLLGWGDGYYKG--EEDXXXXXXXX 98
+ TL +RL A++ G E W+YAIFW+PSYD +SG ++L WGDG Y G EE
Sbjct: 31 ETTLPKRLHAVLNGTHEPWSYAIFWKPSYDDFSGEAVLKWGDGVYTGGNEEKTRGRLRRK 90
Query: 99 XXXXTSSAEQEHRRKVLRDLNSLISGSSAPASXXXXXXXXXX----XXWFFLVSMTQSFV 154
+S E+E R V+R+LN +ISG + P WFFLVSMT SF
Sbjct: 91 KTILSSPEEKERRSNVIRELNLMISGEAFPVVEDDVSDDDDVEVTDMEWFFLVSMTWSFG 150
Query: 155 NGGGLAGQAYFNSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTEL 214
NG GLAG+A+ + PV V G+D + S C+RA+QG G+QT++C+PS NGV+EL STE
Sbjct: 151 NGSGLAGKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGLQTILCIPSHNGVLELASTEE 210
Query: 215 IYQNSDLMNKVKVLF 229
I NSDL N+++ LF
Sbjct: 211 IRPNSDLFNRIRFLF 225
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 460 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQS 519
A+GR++PLNHVEAER RREKLN RFYALRAVVPNVSKMDK SLL DA+ YI ELK+K ++
Sbjct: 335 AHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAEN 394
Query: 520 SESDKTGLQKQFDAMKKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILVEDIDVKII 579
E +K ++ QF+ +K+ + I+VKI+
Sbjct: 395 VELEKHAIEIQFNELKEIAGQRNAIPSVCKYEEKASE--------------MMKIEVKIM 440
Query: 580 -GWDAMIRVQCSKKNHPAAILMAALM 604
DAM+RV+ K +HP A LM ALM
Sbjct: 441 ESDDAMVRVESRKDHHPGARLMNALM 466
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 85/147 (57%), Gaps = 35/147 (23%)
Query: 460 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQS 519
ANGREEPLNHVEAERQRREKLNQRFYALR+VVPN+SKMDKASLLGDAISYI EL+ K++
Sbjct: 387 ANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKI 446
Query: 520 SESDKTGLQKQFDAMKKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILVE---DIDV 576
E ++ G K I VE ++D+
Sbjct: 447 MEDERVGTDKSL--------------------------------SESNTITVEESPEVDI 474
Query: 577 KIIGWDAMIRVQCSKKNHPAAILMAAL 603
+ + + ++RV +HPA+ ++ A+
Sbjct: 475 QAMNEEVVVRVISPLDSHPASRIIQAM 501
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 9/195 (4%)
Query: 43 DTLQQRLQALIEGARE---TWTYAIFWQPSYDYSGTSLLGWGDGYYK--GEEDXXXXXXX 97
DTL ++L +L++ +W YAIFWQ + SG +LGWGDG + EE+
Sbjct: 46 DTLNKKLSSLVDWPNSENFSWNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKVVRS 105
Query: 98 XXXXXTSSAE---QEHRRKVLRDLNSLISGSSAPASXXXXXXXXXXXXWFFLVSMTQSFV 154
+ E Q+ R++VL+ L+ L GS + FFL SM F
Sbjct: 106 YNFNNMGAEEETWQDMRKRVLQKLHRLFGGSDE-DNYALSLEKVTATEIFFLASMYFFFN 164
Query: 155 NGGGLAGQAYFNSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTEL 214
+G G G+ Y + VW++ A + C R+ + GI+T+V VP+ GV+ELGS
Sbjct: 165 HGEGGPGRCYSSGKHVWLSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLELGSVWS 224
Query: 215 IYQNSDLMNKVKVLF 229
+ +N L+ V+ LF
Sbjct: 225 LPENIGLVKSVQALF 239
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 79/144 (54%), Gaps = 33/144 (22%)
Query: 460 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQS 519
ANGR E LNHVEAERQRREKLNQRFYALR+VVPN+SKMDKASLLGDA+SYI EL KL+
Sbjct: 425 ANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKV 484
Query: 520 SESDKTGLQKQFDAMKKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILVEDIDVKII 579
E+++ L L DI+V+
Sbjct: 485 MEAERERL---------------------------------GYSSNPPISLDSDINVQTS 511
Query: 580 GWDAMIRVQCSKKNHPAAILMAAL 603
G D +R+ C ++HPA+ + A
Sbjct: 512 GEDVTVRINCPLESHPASRIFHAF 535
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Query: 43 DTLQQRLQALIE---GARETWTYAIFWQPSYDYSGTSLLGWGDGYYK--GEEDXXXXXXX 97
+ LQ +L L+E + +W YAIFWQ S +G +L WGDGY + E +
Sbjct: 46 ENLQNKLSDLVERPNASNFSWNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRI 105
Query: 98 XXXXXTSSAEQEHRRKVLRDLNSLISGSSAPASXXXXXXXXXXXXWFFLVSMTQSFVNGG 157
Q R++VL+ L+ L GS + F L SM SF G
Sbjct: 106 LSMGREEETHQTMRKRVLQKLHDLFGGSEE-ENCALGLDRVTDTEMFLLSSMYFSFPRGE 164
Query: 158 GLAGQAYFNSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTELIYQ 217
G G+ + ++ PVW++ + C R+ + GIQT+V VP+ GVVELGST + +
Sbjct: 165 GGPGKCFASAKPVWLSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLPE 224
Query: 218 NSDLMNKVKVLF 229
+ D + ++ LF
Sbjct: 225 SEDSILSIRSLF 236
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 79/144 (54%), Gaps = 33/144 (22%)
Query: 460 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQS 519
ANGR E LNHVEAERQRREKLNQRFYALR+VVPN+SKMDKASLLGDA+SYI EL KL+
Sbjct: 425 ANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKV 484
Query: 520 SESDKTGLQKQFDAMKKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILVEDIDVKII 579
E+++ L L DI+V+
Sbjct: 485 MEAERERL---------------------------------GYSSNPPISLDSDINVQTS 511
Query: 580 GWDAMIRVQCSKKNHPAAILMAAL 603
G D +R+ C ++HPA+ + A
Sbjct: 512 GEDVTVRINCPLESHPASRIFHAF 535
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Query: 43 DTLQQRLQALIE---GARETWTYAIFWQPSYDYSGTSLLGWGDGYYK--GEEDXXXXXXX 97
+ LQ +L L+E + +W YAIFWQ S +G +L WGDGY + E +
Sbjct: 46 ENLQNKLSDLVERPNASNFSWNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRI 105
Query: 98 XXXXXTSSAEQEHRRKVLRDLNSLISGSSAPASXXXXXXXXXXXXWFFLVSMTQSFVNGG 157
Q R++VL+ L+ L GS + F L SM SF G
Sbjct: 106 LSMGREEETHQTMRKRVLQKLHDLFGGSEE-ENCALGLDRVTDTEMFLLSSMYFSFPRGE 164
Query: 158 GLAGQAYFNSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTELIYQ 217
G G+ + ++ PVW++ + C R+ + GIQT+V VP+ GVVELGST + +
Sbjct: 165 GGPGKCFASAKPVWLSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLPE 224
Query: 218 NSDLMNKVKVLF 229
+ D + ++ LF
Sbjct: 225 SEDSILSIRSLF 236
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 79/144 (54%), Gaps = 33/144 (22%)
Query: 460 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQS 519
ANGR E LNHVEAERQRREKLNQRFYALR+VVPN+SKMDKASLLGDA+SYI EL KL+
Sbjct: 425 ANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKV 484
Query: 520 SESDKTGLQKQFDAMKKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILVEDIDVKII 579
E+++ L L DI+V+
Sbjct: 485 MEAERERL---------------------------------GYSSNPPISLDSDINVQTS 511
Query: 580 GWDAMIRVQCSKKNHPAAILMAAL 603
G D +R+ C ++HPA+ + A
Sbjct: 512 GEDVTVRINCPLESHPASRIFHAF 535
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Query: 43 DTLQQRLQALIE---GARETWTYAIFWQPSYDYSGTSLLGWGDGYYK--GEEDXXXXXXX 97
+ LQ +L L+E + +W YAIFWQ S +G +L WGDGY + E +
Sbjct: 46 ENLQNKLSDLVERPNASNFSWNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRI 105
Query: 98 XXXXXTSSAEQEHRRKVLRDLNSLISGSSAPASXXXXXXXXXXXXWFFLVSMTQSFVNGG 157
Q R++VL+ L+ L GS + F L SM SF G
Sbjct: 106 LSMGREEETHQTMRKRVLQKLHDLFGGSEE-ENCALGLDRVTDTEMFLLSSMYFSFPRGE 164
Query: 158 GLAGQAYFNSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTELIYQ 217
G G+ + ++ PVW++ + C R+ + GIQT+V VP+ GVVELGST + +
Sbjct: 165 GGPGKCFASAKPVWLSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLPE 224
Query: 218 NSDLMNKVKVLF 229
+ D + ++ LF
Sbjct: 225 SEDSILSIRSLF 236
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:9267599-9269002 FORWARD
LENGTH=467
Length = 467
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 64/71 (90%)
Query: 460 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQS 519
ANGREE LNHVEAERQRREKLNQRFYALRAVVPN+SKMDKASLL DAI+YIT+++ K++
Sbjct: 312 ANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRV 371
Query: 520 SESDKTGLQKQ 530
E++K ++++
Sbjct: 372 YETEKQIMKRR 382
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 45 LQQRLQALIEGARETWTYAIFWQPS-YDYSGTSLLGWGDGYYKGEEDXXXXXXXXXXXXT 103
LQQ L+ ++EG+ W YA+FW S + S +L WGDG+ + ++
Sbjct: 50 LQQGLRHVVEGS--DWDYALFWLASNVNSSDGCVLIWGDGHCRVKKGASGEDY------- 100
Query: 104 SSAEQEHRRKVLRDLNSLISGSSAPASXXXXXXXXXXXXWFFLVSMTQSF---VNGGGLA 160
S + E +R+VLR L+ GS F+L S+ SF N G A
Sbjct: 101 -SQQDEIKRRVLRKLHLSFVGSDED-HRLVKSGALTDLDMFYLASLYFSFRCDTNKYGPA 158
Query: 161 GQAYFNSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTELIYQNSD 220
G Y + P+W A + R+ + G QT++ VP +GVVELGS I ++
Sbjct: 159 G-TYVSGKPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVNSGVVELGSLRHIPEDKS 217
Query: 221 LMNKVKVLFNFSN 233
++ VK +F S+
Sbjct: 218 VIEMVKSVFGGSD 230
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:362230-363639 REVERSE
LENGTH=423
Length = 423
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 78/139 (56%), Gaps = 10/139 (7%)
Query: 467 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTG 526
L+HVEAE+QRREKLN RFYALRA+VP VS+MDKASLL DA+SYI LK+K+ E++
Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKK 307
Query: 527 LQ-KQFDAMKKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILVEDIDVKIIGWDAMI 585
++ + D + ++ VKI+G +A+I
Sbjct: 308 MKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDL---------EVQVKIVGEEAII 358
Query: 586 RVQCSKKNHPAAILMAALM 604
RVQ NHP + LM+ALM
Sbjct: 359 RVQTENVNHPTSALMSALM 377
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 32/187 (17%)
Query: 44 TLQQRLQALIEGARETWTYAIFWQPSYD-YSGTSLLGWGDGYYKGEEDXXXXXXXXXXXX 102
LQQ+L+ ++E + + W Y IFWQ +D S S L W DG++ G ++
Sbjct: 34 VLQQKLRFVVETSPDRWAYVIFWQKMFDDQSDRSYLVWVDGHFCGNKNNNSQENYT---- 89
Query: 103 TSSAEQEHRRKVLRDLNSLISGSSAPASXXXXXXXXXXXXWFFLVSMTQSFVNGGGLAGQ 162
T+S E E DL + S F +
Sbjct: 90 TNSIECELMMDGGDDLELFYAAS---------------------------FYGEDRSPRK 122
Query: 163 AYFNSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTELIYQNSDLM 222
+ + VW+ G D L S ERA++ G+ TLV +P NG++ELGS+E I QN + +
Sbjct: 123 EVSDESLVWLTGPDELRFSNYERAKEAGFHGVHTLVSIPINNGIIELGSSESIIQNRNFI 182
Query: 223 NKVKVLF 229
N+VK +F
Sbjct: 183 NRVKSIF 189
>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:6182067-6186261
FORWARD LENGTH=518
Length = 518
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 46 QQRLQALIEGARET--WTYAIFWQPSYDYSGTSLLGWGDGYYKGEEDXXXXXXXXXXXXT 103
++ LQ L++ A ++ WTY++FWQ +L WG+GYY G
Sbjct: 17 KKELQGLLKTAVQSVDWTYSVFWQFC---PQQRVLVWGNGYYNGAIKTRKTTQPAEVTAE 73
Query: 104 SSAEQEHRRKVLRDL-NSLISGSS---APASXXXXXXXXXXXXWFFLVSMTQSFVNGGGL 159
+A + R + LR+L +L++G S A A WF+L+ ++ SF G+
Sbjct: 74 EAALE--RSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSGM 131
Query: 160 AGQAYFNSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTELIYQNS 219
G+AY VW++GA+ + + RA + IQT+VC+P +GVVELG+T+ + ++
Sbjct: 132 PGKAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDV 191
Query: 220 DLMNKVKVLF 229
+ + K F
Sbjct: 192 EFVELTKSFF 201
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 44/57 (77%)
Query: 465 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSE 521
E L+HV AER+RREKLN++F LR++VP V+KMDK S+LGD I+Y+ L+ ++ E
Sbjct: 360 EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:23599809-23602734
FORWARD LENGTH=596
Length = 596
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 43 DTLQQRLQALIEGARETWTYAIFWQPSYDYSGTSLLGWGDGYYKGEEDXXXXXXXXXXXX 102
D L+++L + + W+Y IFW S G +L WGDGYY G D
Sbjct: 11 DNLKKQLAVSVRNIQ--WSYGIFWSVSASQPG--VLEWGDGYYNG--DIKTRKTIQAAEV 64
Query: 103 TSSAEQEHRRKVLRDL-------NSLISGSSA----PASXXXXXXXXXXXXWFFLVSMTQ 151
R + LR+L S SGSS ++ W++LV M+
Sbjct: 65 KIDQLGLERSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSF 124
Query: 152 SFVNGGGLAGQAYFNSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGS 211
F G G+ G A N P+W+ A+ + R+ + +QT+VC P GV+E+G+
Sbjct: 125 VFNIGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGT 184
Query: 212 TELIYQNSDLMNKVKVLF 229
TE I ++ +++ VK LF
Sbjct: 185 TEHIKEDMNVIQSVKTLF 202
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 45/59 (76%)
Query: 464 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSES 522
EE NH +E++RREKLN+RF LR+++P++SK+DK S+L D I Y+ +L+ ++Q ES
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 43 DTLQQRLQALIEGARETWTYAIFWQPSYDYSGTSLLGWGDGYYKGEEDXXXXXXXXXXXX 102
D L+++L + + W+Y IFW S G +L WGDGYY G D
Sbjct: 11 DNLKKQLAVSVRNIQ--WSYGIFWSVSASQPG--VLEWGDGYYNG--DIKTRKTIQAAEV 64
Query: 103 TSSAEQEHRRKVLRDL-------NSLISGSSA----PASXXXXXXXXXXXXWFFLVSMTQ 151
R + LR+L S SGSS ++ W++LV M+
Sbjct: 65 KIDQLGLERSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSF 124
Query: 152 SFVNGGGLAGQAYFNSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGS 211
F G G+ G A N P+W+ A+ + R+ + +QT+VC P GV+E+G+
Sbjct: 125 VFNIGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGT 184
Query: 212 TELIYQNSDLMNKVKVLF 229
TE I ++ +++ VK LF
Sbjct: 185 TEHIKEDMNVIQSVKTLF 202
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 45/59 (76%)
Query: 464 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSES 522
EE NH +E++RREKLN+RF LR+++P++SK+DK S+L D I Y+ +L+ ++Q ES
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 43 DTLQQRLQALIEGARETWTYAIFWQPSYDYSGTSLLGWGDGYYKGEEDXXXXXXXXXXXX 102
D L+++L + + W+Y IFW S G +L WGDGYY G D
Sbjct: 11 DNLKKQLAVSVRNIQ--WSYGIFWSVSASQPG--VLEWGDGYYNG--DIKTRKTIQAAEV 64
Query: 103 TSSAEQEHRRKVLRDL-------NSLISGSSA----PASXXXXXXXXXXXXWFFLVSMTQ 151
R + LR+L S SGSS ++ W++LV M+
Sbjct: 65 KIDQLGLERSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSF 124
Query: 152 SFVNGGGLAGQAYFNSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGS 211
F G G+ G A N P+W+ A+ + R+ + +QT+VC P GV+E+G+
Sbjct: 125 VFNIGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGT 184
Query: 212 TELIYQNSDLMNKVKVLF 229
TE I ++ +++ VK LF
Sbjct: 185 TEHIKEDMNVIQSVKTLF 202
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 45/59 (76%)
Query: 464 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSES 522
EE NH +E++RREKLN+RF LR+++P++SK+DK S+L D I Y+ +L+ ++Q ES
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459
>AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:217106-219684
REVERSE LENGTH=526
Length = 526
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 91/237 (38%), Gaps = 24/237 (10%)
Query: 60 WTYAIFWQPSYDYSGTSLLGWGDGYYKGEEDXXXXXXXXXXXXTSSAEQEHRRKVLRDLN 119
W+YAIFW S G +L WG+G Y G+ +E R+ L
Sbjct: 36 WSYAIFWSSSLTQPG--VLEWGEGCYNGDMKKRKKSYESHYKYGLQKSKELRKLYL---- 89
Query: 120 SLISGSSAPA------------------SXXXXXXXXXXXXWFFLVSMTQSFVNGGGLAG 161
S++ G S S W++LVSM+ F L G
Sbjct: 90 SMLEGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEEWYYLVSMSYVFSPSQCLPG 149
Query: 162 QAYFNSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTELIYQNSDL 221
+A +W+ A R+ + IQT+VC P GV+ELG TELI ++ +L
Sbjct: 150 RASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPYLGGVIELGVTELISEDHNL 209
Query: 222 MNKVKVLFNFSNSNLDXXXXXXXXXXXXAENDPSALWLADPDPDGRDSVSTVAPTTA 278
+ +K +++ D E L ++D D + ++STV +A
Sbjct: 210 LRNIKSCLMEISAHQDNDDEKKMEIKISEEKHQLPLGISDEDLHYKRTISTVLNYSA 266
>AT4G00480.2 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:216866-219684
REVERSE LENGTH=580
Length = 580
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 91/237 (38%), Gaps = 24/237 (10%)
Query: 60 WTYAIFWQPSYDYSGTSLLGWGDGYYKGEEDXXXXXXXXXXXXTSSAEQEHRRKVLRDLN 119
W+YAIFW S G +L WG+G Y G+ +E R+ L
Sbjct: 36 WSYAIFWSSSLTQPG--VLEWGEGCYNGDMKKRKKSYESHYKYGLQKSKELRKLYL---- 89
Query: 120 SLISGSSAPA------------------SXXXXXXXXXXXXWFFLVSMTQSFVNGGGLAG 161
S++ G S S W++LVSM+ F L G
Sbjct: 90 SMLEGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEEWYYLVSMSYVFSPSQCLPG 149
Query: 162 QAYFNSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTELIYQNSDL 221
+A +W+ A R+ + IQT+VC P GV+ELG TELI ++ +L
Sbjct: 150 RASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPYLGGVIELGVTELISEDHNL 209
Query: 222 MNKVKVLFNFSNSNLDXXXXXXXXXXXXAENDPSALWLADPDPDGRDSVSTVAPTTA 278
+ +K +++ D E L ++D D + ++STV +A
Sbjct: 210 LRNIKSCLMEISAHQDNDDEKKMEIKISEEKHQLPLGISDEDLHYKRTISTVLNYSA 266
>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:16529457-16532866
FORWARD LENGTH=637
Length = 637
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 60 WTYAIFWQPSYDYSGTSLLGWGDGYYKGEEDXXXXXXXXXXXXTSSAEQEHRRKVLRDLN 119
W+Y IFW S SG +L WGDGYY G D + R + L +L
Sbjct: 27 WSYGIFWSVSASQSG--VLEWGDGYYNG--DIKTRKTIQASEIKADQLGLRRSEQLSELY 82
Query: 120 SLISG--------------SSAPASXXXXXXXXXXXXWFFLVSMTQSFVNGGGLAGQAYF 165
+S + ++ W++LV M+ F G G+ G+ +
Sbjct: 83 ESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLVCMSFVFNIGEGMPGRTFA 142
Query: 166 NSTPVWVAGADRLAASACERARQGQLFGIQTLVCVPSANGVVELGSTELIYQNSDLMNKV 225
N P+W+ A + R+ + ++T+VC P GVVE+G+TE I ++ +++ V
Sbjct: 143 NGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLGGVVEIGTTEHITEDMNVIQCV 202
Query: 226 KVLF 229
K F
Sbjct: 203 KTSF 206
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 462 GREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSE 521
R+E NH E++RREKLN+RF LR ++P+++K+DK S+L D I Y+ EL+ ++Q E
Sbjct: 435 ARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELE 494
Query: 522 S 522
S
Sbjct: 495 S 495
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 466 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKL 517
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 356
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 466 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKL 517
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 356
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 466 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKL 517
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 356
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 466 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKL 517
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++
Sbjct: 265 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 316
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 47/60 (78%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGLQ 528
++ +ER RR+KLNQR +ALR+VVPN++KMDKAS++ DAISYI L+ + + E++ L+
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELE 115
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 47/60 (78%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGLQ 528
++ +ER RR+KLNQR +ALR+VVPN++KMDKAS++ DAISYI L+ + + E++ L+
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELE 115
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 47/60 (78%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGLQ 528
++ +ER RR+KLNQR +ALR+VVPN++KMDKAS++ DAISYI L+ + + E++ L+
Sbjct: 55 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELE 114
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 47/61 (77%)
Query: 468 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGL 527
++ +ER RR+KLNQR +ALR+VVPN++KMDKAS++ DAISYI L+ + + E++ L
Sbjct: 55 KNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIREL 114
Query: 528 Q 528
+
Sbjct: 115 E 115
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 40/45 (88%)
Query: 472 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTK 516
AER+RR+KLN R YALR++VP ++K+D+AS+LGDAI+Y+ EL+ +
Sbjct: 318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNE 362
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 46/57 (80%)
Query: 472 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGLQ 528
+ER+RR ++ + YALR++VPN++KMDKAS++GDA+ Y+ EL+++ + +SD GL+
Sbjct: 135 SERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLE 191
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 9/136 (6%)
Query: 468 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGL 527
+H+ AER+RREKL QRF AL A+VP + KMDKAS+LGDA+ +I L+ ++ E K
Sbjct: 152 DHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKK-- 209
Query: 528 QKQFDAMKKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILVEDIDVKIIGWDAMIRV 587
++ L + + +I+V+ D +I++
Sbjct: 210 -------ERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKI 262
Query: 588 QCSKKNHPAAILMAAL 603
C K+ A +MA +
Sbjct: 263 LCEKQKGHLAKIMAEI 278
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=305
Length = 305
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 38/47 (80%)
Query: 468 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELK 514
+H+ AER+RREKL QRF AL A++P + KMDKAS+LGDAI +I L+
Sbjct: 126 DHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQ 172
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=254
Length = 254
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 47/60 (78%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGLQ 528
+V +ER RR+KLNQR +ALR+VVPN+SK+DKAS++ D+I Y+ EL + ++ E++ L+
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=304
Length = 304
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 38/47 (80%)
Query: 468 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELK 514
+H+ AER+RREKL QRF AL A++P + KMDKAS+LGDAI +I L+
Sbjct: 126 DHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQ 172
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 47/60 (78%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGLQ 528
+V +ER RR+KLNQR +ALR+VVPN+SK+DKAS++ D+I Y+ EL + ++ E++ L+
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645505 FORWARD
LENGTH=263
Length = 263
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 47/60 (78%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGLQ 528
+V +ER RR+KLNQR +ALR+VVPN+SK+DKAS++ D+I Y+ EL + ++ E++ L+
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 46/59 (77%)
Query: 470 VEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGLQ 528
V +ER RR+KLNQR +ALR+VVPN+SK+DKAS++ D+I Y+ EL + ++ E++ L+
Sbjct: 56 VVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
>AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:9684858-9686321
FORWARD LENGTH=320
Length = 320
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 462 GREEP---LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQ 518
GR EP HV AER+RR+KLN+R AL A++P + K DKA++L DAI ++ +L+ +++
Sbjct: 123 GRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVK 182
Query: 519 SSESDKTGLQK 529
E ++ +K
Sbjct: 183 KLEEERVVTKK 193
>AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3506463-3508752 FORWARD
LENGTH=441
Length = 441
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGL 527
++ +ER+RRE++NQ Y LRAVVP ++K++K + DA+ YI EL + Q E + G+
Sbjct: 265 NLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGI 323
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9678012-9679165 FORWARD
LENGTH=295
Length = 295
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGLQ 528
HV AER+RREKL+++F AL A++P + K DK ++L DAIS + +L+ +L++ + +K
Sbjct: 120 HVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEA-T 178
Query: 529 KQFDAM 534
+Q ++M
Sbjct: 179 RQMESM 184
>AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17876535-17882569 FORWARD
LENGTH=1513
Length = 1513
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQ 518
H +AER+RR ++N +F LR ++PN+ K DKAS+LG+ + Y ELK +Q
Sbjct: 1353 HSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQ 1402
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKL 517
H ++ER+RR+K+NQR L+ +VPN SK DKAS+L + I Y+ +L+ ++
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:11349922-11350694
FORWARD LENGTH=207
Length = 207
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 40/51 (78%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQS 519
++EAER+RREKL+ R ALR+ VP V+ M KAS++ DAI+YI EL+ +++
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKN 83
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 39/50 (78%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQ 518
H +ER+RR+++N++ AL+ ++PN +K+DKAS+L +AI Y+ L+ ++Q
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 39/50 (78%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQ 518
H +ER+RR+++N++ AL+ ++PN +K+DKAS+L +AI Y+ L+ ++Q
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:3341357-3342877 FORWARD
LENGTH=315
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 465 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDK 524
+P ++ AER+RR++LN R LR++VP ++KMD+ S+LGDAI Y+ EL K+ + D+
Sbjct: 148 QPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDE 207
Query: 525 TGL 527
L
Sbjct: 208 QEL 210
>AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13303014-13304661 FORWARD
LENGTH=458
Length = 458
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
Query: 472 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDKTGLQKQ 530
ER+RR N RF+ L+ ++PN +K+D+AS++G+AI YI EL L++ E K ++K+
Sbjct: 251 TERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKEL---LRTIEEFKMLVEKK 306
>AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238904 FORWARD LENGTH=351
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 465 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDK 524
+P ++ AER+RR++LN R LR++VP +SKMD+ S+LGDAI Y+ EL K+ + ++
Sbjct: 175 QPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEE 234
Query: 525 TGL 527
L
Sbjct: 235 QEL 237
>AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238635 FORWARD LENGTH=290
Length = 290
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 465 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQSSESDK 524
+P ++ AER+RR++LN R LR++VP +SKMD+ S+LGDAI Y+ EL K+ + ++
Sbjct: 175 QPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEE 234
Query: 525 TGL 527
L
Sbjct: 235 QEL 237
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 39/51 (76%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQS 519
H +E++RR K+N++ AL+ ++PN +K DKAS+L +AI Y+ +L+ ++Q+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQT 148
>AT5G53210.1 | Symbols: SPCH | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:21586606-21588941
REVERSE LENGTH=364
Length = 364
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 464 EEPLNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYITELKTKLQSSE 521
++ ++HV ER RR+++N+ LR+++P V + D+AS++G + YI+EL+ LQS E
Sbjct: 99 QQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLE 158
Query: 522 SDK 524
+ K
Sbjct: 159 AKK 161
>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704276-8706538 REVERSE LENGTH=478
Length = 478
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 37/50 (74%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQ 518
H +ER+RR+++N+R AL+ ++P +K DKAS+L +AI Y+ L+ ++Q
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQ 338
>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704525-8706538 REVERSE LENGTH=478
Length = 478
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 37/50 (74%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQ 518
H +ER+RR+++N+R AL+ ++P +K DKAS+L +AI Y+ L+ ++Q
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQ 338
>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
Length = 407
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 37/50 (74%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQ 518
H +ER+RR+++N+R AL+ ++P +K DKAS+L +AI Y+ L+ ++Q
Sbjct: 218 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQ 267
>AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22940231-22941332 FORWARD
LENGTH=307
Length = 307
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 467 LNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAISYITELKTKLQSSESDK 524
+NH+ ER RR ++N+ +LRA++P + + D+AS++G AI+Y+ L+ +QS ES K
Sbjct: 127 INHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQK 186
Query: 525 TGLQK 529
Q+
Sbjct: 187 RTQQQ 191
>AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22939661-22941332 FORWARD
LENGTH=358
Length = 358
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 467 LNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAISYITELKTKLQSSESDK 524
+NH+ ER RR ++N+ +LRA++P + + D+AS++G AI+Y+ L+ +QS ES K
Sbjct: 178 INHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQK 237
Query: 525 TGLQK 529
Q+
Sbjct: 238 RTQQQ 242
>AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 |
chr5:18945639-18947434 FORWARD LENGTH=327
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 467 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYITELKTKLQSSESDK 524
+ H+ ER RR ++NQ LR+++P K D+AS++G AI +I EL+ KL S E+ K
Sbjct: 88 MTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQK 147
>AT2G40200.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:16791098-16792027 FORWARD
LENGTH=254
Length = 254
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTK 516
H AE++RR+++N ALR +VPN K+DKA+LL I + ELK K
Sbjct: 67 HRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQK 114
>AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:8715525-8717772
REVERSE LENGTH=414
Length = 414
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 467 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYITELKTKLQSSESDK 524
+ H+ ER RR+++N+ LR+++P V + D+AS++G AI ++ EL+ LQ ES K
Sbjct: 197 MTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK 256
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 39/50 (78%)
Query: 469 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQ 518
H +E++RR ++N++ AL++++PN +K DKAS+L +AI Y+ +L+ ++Q
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 251