Miyakogusa Predicted Gene

Lj2g3v1378940.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1378940.2 Non Chatacterized Hit- tr|F6HPM5|F6HPM5_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,42.37,4e-19,NHL
REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT NAMED,NULL; NHL,NHL repeat;
Calcium-dependent phospho,CUFF.36903.2
         (152 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G70280.2 | Symbols:  | NHL domain-containing protein | chr1:2...   238   1e-63
AT1G70280.1 | Symbols:  | NHL domain-containing protein | chr1:2...   238   1e-63
AT1G23880.1 | Symbols:  | NHL domain-containing protein | chr1:8...   232   8e-62
AT5G14890.1 | Symbols:  | NHL domain-containing protein | chr5:4...   156   4e-39
AT3G14860.2 | Symbols:  | NHL domain-containing protein | chr3:4...   150   4e-37
AT3G14860.1 | Symbols:  | NHL domain-containing protein | chr3:4...   150   4e-37
AT1G23890.2 | Symbols:  | NHL domain-containing protein | chr1:8...   101   2e-22
AT1G23890.1 | Symbols:  | NHL domain-containing protein | chr1:8...   100   3e-22

>AT1G70280.2 | Symbols:  | NHL domain-containing protein |
           chr1:26466086-26468471 REVERSE LENGTH=509
          Length = 509

 Score =  238 bits (608), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 114/152 (75%), Positives = 130/152 (85%), Gaps = 4/152 (2%)

Query: 1   MNHPKGITVDDRGNIYVADITNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDD 60
           +NHPKG+TVDDRGNIYVAD  N AIRKIS+ GVTTIAGGK  R GGHVDGPSE+AKFS+D
Sbjct: 142 LNHPKGLTVDDRGNIYVADTVNNAIRKISEGGVTTIAGGKTVRNGGHVDGPSEDAKFSND 201

Query: 61  FDVVYVGSSCSLLIIDRGNQAIREIQLHFDDCAYQYGSGFPLGVAMLVGAGFFGYMLALL 120
           FDVVYVGSSCSLL+IDRGN+AIREIQLHFDDCAYQYGSGFPLG+A+LV AGFFGYMLALL
Sbjct: 202 FDVVYVGSSCSLLVIDRGNKAIREIQLHFDDCAYQYGSGFPLGIAVLVAAGFFGYMLALL 261

Query: 121 QRRLSTIVASQDAEGPSMSGISPIPYQKPLKY 152
           QRR+ +IV+S + +          P QKP+K+
Sbjct: 262 QRRVGSIVSSHNDQ----EMFEADPDQKPMKH 289


>AT1G70280.1 | Symbols:  | NHL domain-containing protein |
           chr1:26466086-26468116 REVERSE LENGTH=447
          Length = 447

 Score =  238 bits (607), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 114/152 (75%), Positives = 130/152 (85%), Gaps = 4/152 (2%)

Query: 1   MNHPKGITVDDRGNIYVADITNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDD 60
           +NHPKG+TVDDRGNIYVAD  N AIRKIS+ GVTTIAGGK  R GGHVDGPSE+AKFS+D
Sbjct: 80  LNHPKGLTVDDRGNIYVADTVNNAIRKISEGGVTTIAGGKTVRNGGHVDGPSEDAKFSND 139

Query: 61  FDVVYVGSSCSLLIIDRGNQAIREIQLHFDDCAYQYGSGFPLGVAMLVGAGFFGYMLALL 120
           FDVVYVGSSCSLL+IDRGN+AIREIQLHFDDCAYQYGSGFPLG+A+LV AGFFGYMLALL
Sbjct: 140 FDVVYVGSSCSLLVIDRGNKAIREIQLHFDDCAYQYGSGFPLGIAVLVAAGFFGYMLALL 199

Query: 121 QRRLSTIVASQDAEGPSMSGISPIPYQKPLKY 152
           QRR+ +IV+S + +          P QKP+K+
Sbjct: 200 QRRVGSIVSSHNDQ----EMFEADPDQKPMKH 227


>AT1G23880.1 | Symbols:  | NHL domain-containing protein |
           chr1:8436125-8438636 FORWARD LENGTH=545
          Length = 545

 Score =  232 bits (591), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 112/151 (74%), Positives = 128/151 (84%), Gaps = 4/151 (2%)

Query: 1   MNHPKGITVDDRGNIYVADITNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDD 60
           +N+PKG+TVDDRGNIYVAD  N AIRKIS++GVTTIAGGK  RGGGHVDGPSE+AKFS+D
Sbjct: 204 LNNPKGLTVDDRGNIYVADTVNNAIRKISEAGVTTIAGGKMVRGGGHVDGPSEDAKFSND 263

Query: 61  FDVVYVGSSCSLLIIDRGNQAIREIQLHFDDCAYQYGSGFPLGVAMLVGAGFFGYMLALL 120
           FDVVY+GSSCSLL+IDRGNQAIREIQLHFDDCA QYGSGFPLG+A+LV A FFGYMLALL
Sbjct: 264 FDVVYLGSSCSLLVIDRGNQAIREIQLHFDDCADQYGSGFPLGIAVLVAAVFFGYMLALL 323

Query: 121 QRRLSTIVASQDAEGPSMSGISPIPYQKPLK 151
           QRRLS+IV+    +         +P Q P+K
Sbjct: 324 QRRLSSIVSYHTDQ----EVFEAVPDQDPIK 350


>AT5G14890.1 | Symbols:  | NHL domain-containing protein |
           chr5:4818056-4821534 FORWARD LENGTH=754
          Length = 754

 Score =  156 bits (395), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 84/156 (53%), Positives = 104/156 (66%), Gaps = 13/156 (8%)

Query: 1   MNHPKGITVDDRGNIYVADITNMAIRKISDSGVTTIA-GGKWSRGGGHVDGPSEEAKFSD 59
           MN P+G+ +DDRGNIYVAD  NMAIRKISD GV+TIA GG+WS G        E  +FSD
Sbjct: 151 MNRPRGLAMDDRGNIYVADTINMAIRKISDDGVSTIAAGGRWSGGSKE-----ESMRFSD 205

Query: 60  DFDVVYVGSSCSLLIIDRGNQAIREIQLHFDDCAYQY--GSGFPLGVAMLVGAGFFGYML 117
           DFD++YV SSCSLL+IDRGNQ I+EIQLH  DC+          LG A+LV A FFGYML
Sbjct: 206 DFDLIYVSSSCSLLVIDRGNQLIKEIQLHDHDCSQPEPDTDSLHLGTALLVAAVFFGYML 265

Query: 118 ALLQRRLSTIVASQDAEGPSMSGISP-----IPYQK 148
           ALL RR+ ++ +S   +  S   ++       PYQ+
Sbjct: 266 ALLVRRVRSLFSSSSHDTKSKRHVATPSMTMAPYQR 301


>AT3G14860.2 | Symbols:  | NHL domain-containing protein |
           chr3:4998591-5000894 REVERSE LENGTH=493
          Length = 493

 Score =  150 bits (378), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 73/123 (59%), Positives = 93/123 (75%), Gaps = 2/123 (1%)

Query: 1   MNHPKGITVDDRGNIYVADITNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDD 60
            NHP+G+T+DD+GN+YVAD  N+AIRKI DSGVTTIAGGK S   G+ DGPSE+AKFS+D
Sbjct: 149 FNHPRGVTMDDKGNVYVADTLNLAIRKIGDSGVTTIAGGK-SNIAGYRDGPSEDAKFSND 207

Query: 61  FDVVYVGSSCSLLIIDRGNQAIREIQLHFDDCAYQYGSGFPLG-VAMLVGAGFFGYMLAL 119
           FDVVYV  +CSLL+IDRGN A+R+I L  +DC YQ  S   L  + +++GA   GY   +
Sbjct: 208 FDVVYVRPTCSLLVIDRGNAALRQISLSEEDCDYQDDSSISLTDILLVIGAVLIGYATCM 267

Query: 120 LQR 122
           LQ+
Sbjct: 268 LQQ 270


>AT3G14860.1 | Symbols:  | NHL domain-containing protein |
           chr3:4998591-5000894 REVERSE LENGTH=492
          Length = 492

 Score =  150 bits (378), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 73/123 (59%), Positives = 93/123 (75%), Gaps = 2/123 (1%)

Query: 1   MNHPKGITVDDRGNIYVADITNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDD 60
            NHP+G+T+DD+GN+YVAD  N+AIRKI DSGVTTIAGGK S   G+ DGPSE+AKFS+D
Sbjct: 149 FNHPRGVTMDDKGNVYVADTLNLAIRKIGDSGVTTIAGGK-SNIAGYRDGPSEDAKFSND 207

Query: 61  FDVVYVGSSCSLLIIDRGNQAIREIQLHFDDCAYQYGSGFPLG-VAMLVGAGFFGYMLAL 119
           FDVVYV  +CSLL+IDRGN A+R+I L  +DC YQ  S   L  + +++GA   GY   +
Sbjct: 208 FDVVYVRPTCSLLVIDRGNAALRQISLSEEDCDYQDDSSISLTDILLVIGAVLIGYATCM 267

Query: 120 LQR 122
           LQ+
Sbjct: 268 LQQ 270


>AT1G23890.2 | Symbols:  | NHL domain-containing protein |
           chr1:8438900-8440803 REVERSE LENGTH=400
          Length = 400

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 2/90 (2%)

Query: 4   PKGITVDDRGNIYVADITNMAIRKISDSG-VTTIAGGKWSRGGGHVDGPSEEAKFSDDFD 62
           P+G  VD +GN+YVAD +N AIRKIS SG VTTIAGG  S+  GH DGP++ A FS DF+
Sbjct: 103 PRGFAVDAKGNVYVADKSNKAIRKISSSGSVTTIAGG-ISKAFGHRDGPAQNATFSSDFE 161

Query: 63  VVYVGSSCSLLIIDRGNQAIREIQLHFDDC 92
           + +V   C LL+ D GN+ IR+I L  +DC
Sbjct: 162 ITFVPQRCCLLVSDHGNEMIRQINLKEEDC 191


>AT1G23890.1 | Symbols:  | NHL domain-containing protein |
           chr1:8439321-8440803 REVERSE LENGTH=261
          Length = 261

 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 2/90 (2%)

Query: 4   PKGITVDDRGNIYVADITNMAIRKISDSG-VTTIAGGKWSRGGGHVDGPSEEAKFSDDFD 62
           P+G  VD +GN+YVAD +N AIRKIS SG VTTIAGG  S+  GH DGP++ A FS DF+
Sbjct: 103 PRGFAVDAKGNVYVADKSNKAIRKISSSGSVTTIAGG-ISKAFGHRDGPAQNATFSSDFE 161

Query: 63  VVYVGSSCSLLIIDRGNQAIREIQLHFDDC 92
           + +V   C LL+ D GN+ IR+I L  +DC
Sbjct: 162 ITFVPQRCCLLVSDHGNEMIRQINLKEEDC 191