Miyakogusa Predicted Gene

Lj2g3v1155210.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1155210.1 tr|G7JX88|G7JX88_MEDTR COSII OS=Medicago
truncatula GN=MTR_5g057670 PE=2 SV=1,89.68,0,SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; DUF1218,Protein of unknown function DUF1218;
seg,NU,NODE_34354_length_674_cov_168.973297.path2.1
         (155 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13380.1 | Symbols:  | Protein of unknown function (DUF1218) ...   213   4e-56
AT4G27435.1 | Symbols:  | Protein of unknown function (DUF1218) ...   132   1e-31
AT1G61065.1 | Symbols:  | Protein of unknown function (DUF1218) ...   128   1e-30
AT3G15480.1 | Symbols:  | Protein of unknown function (DUF1218) ...   118   1e-27
AT1G52910.1 | Symbols:  | Protein of unknown function (DUF1218) ...   113   5e-26
AT1G68220.1 | Symbols:  | Protein of unknown function (DUF1218) ...   105   2e-23
AT5G17210.2 | Symbols:  | Protein of unknown function (DUF1218) ...    47   4e-06
AT5G17210.1 | Symbols:  | Protein of unknown function (DUF1218) ...    47   5e-06

>AT1G13380.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:4589218-4590362 REVERSE LENGTH=188
          Length = 188

 Score =  213 bits (542), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 103/148 (69%), Positives = 117/148 (79%), Gaps = 3/148 (2%)

Query: 8   NETYCVYSSDVATGYGVGAXXXXXXXXXXXMGVTKCMCFGRPLTPGGNRAWSIIYFMSSW 67
           N T+CVY SDVATGYGVGA           M VTKCMCFGRPL PG +RAWSIIYF+SSW
Sbjct: 44  NTTFCVYDSDVATGYGVGAFLFLLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSW 103

Query: 68  ATFLVAESCLIAGATKNAYHTKYRGMIYAQNFSCESLRKGIFVTAAVFIVATMILNVYYY 127
            TFLVAE+C+IAGATKNAYHTKY   + +Q FSC SLRKGIF+  AVFIVATM+LNVYYY
Sbjct: 104 MTFLVAEACVIAGATKNAYHTKY---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYY 160

Query: 128 MYFTKATTTPLSQKANRVSSTVGMTGYA 155
           MYFTK+ ++P + KANR SS +GM GYA
Sbjct: 161 MYFTKSVSSPPAHKANRSSSNIGMAGYA 188


>AT4G27435.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr4:13723903-13724872 FORWARD LENGTH=173
          Length = 173

 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 61/130 (46%), Positives = 81/130 (62%)

Query: 10  TYCVYSSDVATGYGVGAXXXXXXXXXXXMGVTKCMCFGRPLTPGGNRAWSIIYFMSSWAT 69
            YCVY SD ATGYGVGA           M V++C C G+PL PGG+RA ++I F+ SW  
Sbjct: 42  NYCVYDSDRATGYGVGAFLFSVASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMF 101

Query: 70  FLVAESCLIAGATKNAYHTKYRGMIYAQNFSCESLRKGIFVTAAVFIVATMILNVYYYMY 129
           FL+AE CL+AG+ +NAYHTKYR M       C++LRKG+F   A F+    I++ +YY +
Sbjct: 102 FLIAEICLLAGSVENAYHTKYRTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFF 161

Query: 130 FTKATTTPLS 139
           +  A    LS
Sbjct: 162 YFSAAEASLS 171


>AT1G61065.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:22490430-22491330 REVERSE LENGTH=180
          Length = 180

 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 1/144 (0%)

Query: 5   EGKNETYCVYSSDVATGYGVGAXXXXXXXXXXXMGVTKCMCFGRPLTPGGNRAWSIIYFM 64
           E ++ +YCVY  D+ATG GVG+           M  ++C+C GR LTP G+R+W+I  F+
Sbjct: 36  ESRDLSYCVYDKDIATGLGVGSFLVLLASQLLIMVASRCLCCGRALTPSGSRSWAIFLFI 95

Query: 65  SSWATFLVAESCLIAGATKNAYHTKYRGMIYAQNFSCESLRKGIFVTAAVFIVATMILNV 124
           ++W  F +A+ CL+AG+ +NAYHTKYR      + SC SLRKG+F   A FIV T I++ 
Sbjct: 96  TTWVFFFIAQVCLLAGSVRNAYHTKYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSE 155

Query: 125 YYYMYFTKATT-TPLSQKANRVSS 147
            YY+  ++A    P      R+SS
Sbjct: 156 LYYVTLSRAKDFQPSRDPGIRMSS 179


>AT3G15480.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr3:5226489-5227666 REVERSE LENGTH=175
          Length = 175

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 80/130 (61%), Gaps = 1/130 (0%)

Query: 5   EGKNETYCVYSSDVATGYGVGAXXXXXXXXXXXMGVTKCMCFGRPLTPGGNRAWSIIYFM 64
             K   YCVY +D+AT YG GA           M  ++C C G+ L PGG+RA +II F+
Sbjct: 37  RDKQYDYCVYGTDIATSYGAGAFVLLFVSQVLIMAASRCFCCGKSLNPGGSRACAIILFL 96

Query: 65  SSWATFLVAESCLIAGATKNAYHTKYRGMIYAQN-FSCESLRKGIFVTAAVFIVATMILN 123
             W  FL+AE CL+A + +NAYHT+YR M   ++  SCE +RKG+F   A F + T I++
Sbjct: 97  ICWVFFLIAEMCLLAASIRNAYHTQYRKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVS 156

Query: 124 VYYYMYFTKA 133
            +YY+ +++A
Sbjct: 157 QFYYVCYSRA 166


>AT1G52910.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:19708114-19709128 FORWARD LENGTH=175
          Length = 175

 Score =  113 bits (283), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 2/131 (1%)

Query: 5   EGKNE-TYCVYSSDVATGYGVGAXXXXXXXXXXXMGVTKCMCFGRPLTPGGNRAWSIIYF 63
           +G+ E  +C Y SD+AT YG GA           M  ++C C G+ L PGG+RA  I+ F
Sbjct: 36  DGEKEFEHCEYGSDIATSYGAGAFVLLFISQVIIMVASRCFCCGKALKPGGSRACGIMLF 95

Query: 64  MSSWATFLVAESCLIAGATKNAYHTKYRGMIYAQN-FSCESLRKGIFVTAAVFIVATMIL 122
           +  W  FL+AE CL+AG+ +NAYHT YR M   +N  SCE +RKG+F   A F + T I+
Sbjct: 96  LICWVFFLIAEVCLLAGSIRNAYHTTYRRMWNIENPPSCEVIRKGVFAAGASFALFTAIV 155

Query: 123 NVYYYMYFTKA 133
           + +YY+ +++A
Sbjct: 156 SQFYYISYSRA 166


>AT1G68220.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:25570322-25571562 FORWARD LENGTH=201
          Length = 201

 Score =  105 bits (261), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 2/147 (1%)

Query: 7   KNETYCVYSSDVATGYGVGAXXXXXXXXXXXMGVTKCMCFGRPLTPGGN-RAWSIIYFMS 65
             +T C Y ++ +T YG+ A            GVTKC+CFG+ L  G +   W+I++F+ 
Sbjct: 40  DEKTICKYGTEASTVYGMSAFGLLLVSQAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVV 99

Query: 66  SWATFLVAESCLIAGATKNAYHTKYRGMIYAQNFSCESLRKGIFVTAAVFIVATMILNVY 125
           SW +FL AE+CL+ G+ +NAYHTK  G+   +  SC  L  G+F   A F + ++I  + 
Sbjct: 100 SWVSFLGAEACLLGGSARNAYHTKSEGIYKGKELSCAVLPVGVFAAGAAFTLMSLIATIL 159

Query: 126 YYMYFTKATTTPLSQKANRVSSTVGMT 152
           YY+  +KA T    +  N     +GMT
Sbjct: 160 YYLAHSKADTGGWEKHQND-GINIGMT 185


>AT5G17210.2 | Symbols:  | Protein of unknown function (DUF1218) |
           chr5:5656700-5657970 FORWARD LENGTH=175
          Length = 175

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 3/91 (3%)

Query: 43  CMCFGR-PLTPGGNRAWSIIYFMSSWATFLVAESCLIAGATKNAYHTKYRGMIYAQNFSC 101
           C C  + P     N   S+I F+ SW TF++A   L++GA  N  HT+    + A  + C
Sbjct: 44  CFCCRKGPAPSRSNWIISLICFVVSWFTFVIAFLVLLSGAALNDEHTEES--MNAGTYFC 101

Query: 102 ESLRKGIFVTAAVFIVATMILNVYYYMYFTK 132
             ++ G+F T AV  + T+ L + YY+  T 
Sbjct: 102 YIVKPGVFSTGAVLSLVTIALGIVYYLCLTS 132


>AT5G17210.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr5:5656519-5657970 FORWARD LENGTH=209
          Length = 209

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 43  CMCFGR-PLTPGGNRAWSIIYFMSSWATFLVAESCLIAGATKNAYHTKYRGMIYAQNFSC 101
           C C  + P     N   S+I F+ SW TF++A   L++GA  N  HT+    + A  + C
Sbjct: 78  CFCCRKGPAPSRSNWIISLICFVVSWFTFVIAFLVLLSGAALNDEHTEES--MNAGTYFC 135

Query: 102 ESLRKGIFVTAAVFIVATMILNVYYYMYFT 131
             ++ G+F T AV  + T+ L + YY+  T
Sbjct: 136 YIVKPGVFSTGAVLSLVTIALGIVYYLCLT 165