Miyakogusa Predicted Gene

Lj2g3v0889170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0889170.1 Non Chatacterized Hit- tr|I1J4H3|I1J4H3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.879
PE=4,82.71,0,seg,NULL; no description,NULL; no description,Transferrin
receptor-like, dimerisation domain; Transf,CUFF.35694.1
         (215 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19740.1 | Symbols:  | Peptidase M28 family protein | chr5:66...   242   2e-64
AT3G54720.1 | Symbols: AMP1, COP2, HPT, PT, MFO1 | Peptidase M28...   161   2e-40

>AT5G19740.1 | Symbols:  | Peptidase M28 family protein |
           chr5:6673986-6676767 FORWARD LENGTH=681
          Length = 681

 Score =  242 bits (617), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 123/215 (57%), Positives = 152/215 (70%), Gaps = 13/215 (6%)

Query: 1   MYEXXXXXXXXPLIGRLGGAGSDYAAFLQHVGIPAADIAFGGDSATYPVYHSLYDDFIWM 60
           +YE         +I RLGG GSDYA+F+QHVG+P  D++FG     YPVYHS+YDDF WM
Sbjct: 446 IYESWIGSSDSVVIRRLGGGGSDYASFVQHVGVPGVDMSFG---RGYPVYHSMYDDFTWM 502

Query: 61  QKFGDPMFQRHVAAASVWGLVALWLADEEFIPFDYVSYAKELQLSVKVLENEISSKDINL 120
           +KFGDPMFQRHVA ASV GLVAL LADEE IPF+Y SYA EL+ S + LENE    +I++
Sbjct: 503 EKFGDPMFQRHVAMASVLGLVALRLADEEIIPFNYTSYALELKKSAEDLENEKLGHNIDV 562

Query: 121 TPMFTSIKELEKAATMIKNQRKELAASKGWTTRKENHLKVRELNDRLMMAERAFTDRDGL 180
           + +  SI++L  AA  I  +++ +  +          LKVRELNDRLMMAERA TDRDGL
Sbjct: 563 STLIKSIEDLSTAAKHISLEKEAIKGA----------LKVRELNDRLMMAERALTDRDGL 612

Query: 181 FGMSWYKHLIYGRSKHNGYGSQSFPGIDDAVIIAK 215
               WYKHLIYG SK++ YGS+SFPG+DDA+  AK
Sbjct: 613 SERPWYKHLIYGPSKYDDYGSKSFPGVDDAIDNAK 647


>AT3G54720.1 | Symbols: AMP1, COP2, HPT, PT, MFO1 | Peptidase M28
           family protein | chr3:20254852-20257815 REVERSE
           LENGTH=705
          Length = 705

 Score =  161 bits (408), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 114/199 (57%), Gaps = 4/199 (2%)

Query: 13  LIGRLGGAGSDYAAFLQHVGIPAADIAFGGDSATYPVYHSLYDDFIWMQKFGDPMFQRHV 72
           +I RL    SD++ FL H GIP+ D+ +G D   YPVYH+ +D + WM    DP+F RHV
Sbjct: 479 IIQRLSRVDSDFSGFLHHAGIPSIDMYYGAD---YPVYHTAFDSYDWMIHNADPLFHRHV 535

Query: 73  AAASVWGLVALWLADEEFIPFDYVSYAKELQLSVKVLENEISSKDINLTPMFTSIKELEK 132
           A A +WGL+ + LADE  IPFDY+SYA +LQ     L   +  K +++ P+  +I+E   
Sbjct: 536 AMAGIWGLLGILLADEPLIPFDYISYADQLQAHRDKLSKLLEGK-VSVNPLSMAIQEFSL 594

Query: 133 AATMIKNQRKELAASKGWTTRKENHLKVRELNDRLMMAERAFTDRDGLFGMSWYKHLIYG 192
            A    ++ K+L              K RELNDRLM+ ER F D +G+ G  W+KHL+YG
Sbjct: 595 VAKEAADEAKKLKGKSYSKNDVAAAAKRRELNDRLMLVERGFLDAEGIKGKEWFKHLVYG 654

Query: 193 RSKHNGYGSQSFPGIDDAV 211
            +         FPGI DA+
Sbjct: 655 PAAEPESKLGFFPGIADAI 673