Miyakogusa Predicted Gene

Lj1g3v4919810.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4919810.1 tr|C1DYW4|C1DYW4_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_55804
,31.34,0.000000000007,seg,NULL,CUFF.33603.1
         (342 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G27710.1 | Symbols:  | unknown protein; Has 49 Blast hits to ...   398   e-111

>AT5G27710.1 | Symbols:  | unknown protein; Has 49 Blast hits to 49
           proteins in 17 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other
           Eukaryotes - 1 (source: NCBI BLink). |
           chr5:9813069-9815018 FORWARD LENGTH=335
          Length = 335

 Score =  398 bits (1023), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/345 (57%), Positives = 243/345 (70%), Gaps = 25/345 (7%)

Query: 8   ISLGLAIFLSFSITTSSQQHXXXXXXXXXXXKRDDAPLSFNPIPKATPXXXXXXXXXXXX 67
           + L   IF+SFSI  +S              K   A  S +  PKAT             
Sbjct: 6   VPLRFTIFISFSIAAASS------------FKLHSASHSPSSFPKATGDDLLSVLGPPSA 53

Query: 68  XQTVNPAVARHLKSCLKFLVPFSPPEPRHRKLGLGRAGTSLTGATGR----------DTA 117
              +NP V+R +KSCLKFLVPF   +P   K   GR        +G+          +  
Sbjct: 54  ASCLNPIVSREIKSCLKFLVPFKSDKP---KPEFGRCSPRTGLCSGKIDAVERRSKFEEE 110

Query: 118 NNLIWFPPEPVLDLARIAVDSGGDPAAIQRALDPTIIPVPDVEGSNKNRCQLTRTPYGRH 177
           N+LIW+PPE VL+LAR+AVDSGGDP +IQR L+P +IPVPDVE S K++CQLTRTPYGRH
Sbjct: 111 NSLIWWPPESVLELARLAVDSGGDPGSIQRTLNPKMIPVPDVERSRKDKCQLTRTPYGRH 170

Query: 178 FISQELNLYLKFLFELIADRAPSVGFKVSLNRFDLFHGHMFLAVDTGRLGILFHAREYPA 237
           FI++E+N Y +FLF LI  R PSVG  VSL+R+DLFHGH+FLA ++GRLGILFHA+EYPA
Sbjct: 171 FIAEEVNSYFEFLFHLIESRGPSVGLNVSLSRYDLFHGHLFLASESGRLGILFHAKEYPA 230

Query: 238 YDEQVFPYNLGFCQKGTNVTYDDSMNLRNILWLAPLPGDSAKSWLAPGVLVVLDARPDGI 297
           YD++VFPYN+G+CQ+G++V Y+DSMNLRNILWLAPLP +S+  W+APGVLVVLDA PDGI
Sbjct: 231 YDKKVFPYNMGYCQRGSDVKYNDSMNLRNILWLAPLPSNSSPDWVAPGVLVVLDAHPDGI 290

Query: 298 IYRDLIPDYVDFARTIYEDDLGNCAVDVNYLNVGSETGNYQLFIC 342
           IYRDLIPDYV F RTIYEDDLG  AVDVNYLNVG+   +YQLF+C
Sbjct: 291 IYRDLIPDYVKFVRTIYEDDLGTTAVDVNYLNVGAHEPDYQLFMC 335