Miyakogusa Predicted Gene

Lj1g3v4830430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4830430.1 tr|C0Z334|C0Z334_ARATH AT3G62190 protein
OS=Arabidopsis thaliana GN=At3g62190 PE=4 SV=1,73.77,2e-19,Chaperone
J-domain,Heat shock protein DnaJ, N-terminal; DnaJ,Heat shock protein
DnaJ, N-terminal; DN,CUFF.33387.1
         (133 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G62190.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   166   5e-42
AT3G62190.2 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   100   5e-22

>AT3G62190.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr3:23021146-23022614 FORWARD LENGTH=138
          Length = 138

 Score =  166 bits (420), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 82/138 (59%), Positives = 102/138 (73%), Gaps = 5/138 (3%)

Query: 1   MDANDARILLGFPPNSHPTPSQVKSAYKKKVWESHPDLFPSHEKPLAESKFKLISEAYAC 60
           M+  +A+ILLGFPPNS P PSQVK+AY+KKVWESHPDLFP  +K +AESKFK ISEAY+C
Sbjct: 1   MEVEEAKILLGFPPNSRPDPSQVKAAYRKKVWESHPDLFPDDQKLVAESKFKSISEAYSC 60

Query: 61  LLPG---GREASSSVEYSRVVRTGVPR--AQGGRKNHAMIKVPFIFLILGTVTLGGFNAS 115
           L  G   G+    +  YSRVV+TGVPR  +   R N  +I  PF+ ++LGT+ LGG  A+
Sbjct: 61  LESGDVKGQWYYRAGVYSRVVKTGVPRPYSSAKRGNRWLIGAPFLLIVLGTIGLGGIKAN 120

Query: 116 RAYRRQKEAYPSHNPFLP 133
           RAY  QK+ +PSHNPFLP
Sbjct: 121 RAYNLQKQTFPSHNPFLP 138


>AT3G62190.2 | Symbols:  | Chaperone DnaJ-domain superfamily
          protein | chr3:23021146-23022080 FORWARD LENGTH=77
          Length = 77

 Score = 99.8 bits (247), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 53/61 (86%)

Query: 1  MDANDARILLGFPPNSHPTPSQVKSAYKKKVWESHPDLFPSHEKPLAESKFKLISEAYAC 60
          M+  +A+ILLGFPPNS P PSQVK+AY+KKVWESHPDLFP  +K +AESKFK ISEAY+C
Sbjct: 1  MEVEEAKILLGFPPNSRPDPSQVKAAYRKKVWESHPDLFPDDQKLVAESKFKSISEAYSC 60

Query: 61 L 61
          L
Sbjct: 61 L 61