Miyakogusa Predicted Gene
- Lj1g3v4808860.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4808860.1 Non Chatacterized Hit- tr|I1NBL5|I1NBL5_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,83.87,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; Translation
proteins,Translation elongati,CUFF.33349.1
(719 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G11160.1 | Symbols: | Translation initiation factor 2, small... 870 0.0
AT1G17220.1 | Symbols: FUG1 | Translation initiation factor 2, s... 339 4e-93
AT1G76810.1 | Symbols: | eukaryotic translation initiation fact... 100 5e-21
AT1G21160.1 | Symbols: | eukaryotic translation initiation fact... 96 8e-20
AT1G76820.1 | Symbols: | eukaryotic translation initiation fact... 96 1e-19
AT1G76720.1 | Symbols: | eukaryotic translation initiation fact... 91 4e-18
AT5G39900.1 | Symbols: | Small GTP-binding protein | chr5:15976... 70 5e-12
AT2G27700.2 | Symbols: | eukaryotic translation initiation fact... 70 6e-12
AT2G27700.1 | Symbols: | eukaryotic translation initiation fact... 67 6e-11
AT5G13650.1 | Symbols: | elongation factor family protein | chr... 65 2e-10
AT5G13650.2 | Symbols: | elongation factor family protein | chr... 65 2e-10
AT5G08650.1 | Symbols: | Small GTP-binding protein | chr5:28065... 61 3e-09
AT2G31060.3 | Symbols: | elongation factor family protein | chr... 52 1e-06
AT4G20360.1 | Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase ho... 51 3e-06
AT2G31060.2 | Symbols: | elongation factor family protein | chr... 50 7e-06
>AT4G11160.1 | Symbols: | Translation initiation factor 2, small
GTP-binding protein | chr4:6803846-6806726 FORWARD
LENGTH=743
Length = 743
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/676 (65%), Positives = 532/676 (78%), Gaps = 19/676 (2%)
Query: 62 FSSGTEDCGIRCFHTSSQVWARSGE----TFGLKTPKKE------KYVRKESR-NQPPVE 110
+ S + IR FH S + A+ E + KK+ K+ ++E + ++PPVE
Sbjct: 69 YESFPTETSIRYFHASRETLAKRKEDADRLLSHRERKKQTVKTKGKFSKREKKTDKPPVE 128
Query: 111 APYVP-RNVTATKSNPVKTVEIFEGMTLVELAKRTGKSVSSLQDILTNVGEKVGSEFEPL 169
APYVP R K P KTV+IFEGMTL+EL+KRTG+SV+ LQ IL NVGE SEF+ +
Sbjct: 129 APYVPPRLKRLAKGLPGKTVDIFEGMTLLELSKRTGESVAVLQSILINVGETFSSEFDTI 188
Query: 170 SMDISELVALEVGVNVKRLHSTEGNEVLPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKE 229
S+D++EL+A+E+G+NV+R HSTEG+E+LPRP VVTVMGHVDHGKTSLLDALR TSVAA+E
Sbjct: 189 SVDVAELLAMEIGINVRRQHSTEGSEILPRPPVVTVMGHVDHGKTSLLDALRNTSVAARE 248
Query: 230 AGGITQHIGAFVVVMP-SGASITFLDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQ 288
AGGITQH+GAFVV MP SG SITFLDTPGH VTDIVVLVVAADDGVMPQ
Sbjct: 249 AGGITQHVGAFVVGMPDSGTSITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQ 308
Query: 289 TLEAMSHAKAANVPIVVAINKCDKPGANPERVKLQMASEGLLLEEMGGDIQVVEVSATAK 348
TLEA++HA++ANVP+VVAINKCDKPGANPE+VK Q+ SEG+ LE++GG++Q VEVSA
Sbjct: 309 TLEAIAHARSANVPVVVAINKCDKPGANPEKVKYQLTSEGIELEDIGGNVQAVEVSAAKS 368
Query: 349 TGLDNLEEALVLQADMMELKARVDGPAQAYVVEARLDKGRGPLVTTIVKAGTLVCGQYVV 408
TGLD LEEAL+LQA M+LKARVDGPAQAYVVEARLDKGRGPL T IVKAGTLV GQ+VV
Sbjct: 369 TGLDKLEEALLLQAVDMDLKARVDGPAQAYVVEARLDKGRGPLATIIVKAGTLVRGQHVV 428
Query: 409 VGSQWGRIKAIKDMVGRLTQRATPAMPVEIEGLRGLPMAGDDVIVVHSEERARMLSSGRK 468
+G QWGR++AI+DM+G+ T RATPAMPVEIEGL+GLPMAGDDVIVV SEERARMLS GRK
Sbjct: 429 IGCQWGRLRAIRDMIGKTTDRATPAMPVEIEGLKGLPMAGDDVIVVESEERARMLSEGRK 488
Query: 469 KKAEEDRL----RNKMIPDNPTTSDDSVEVPLTVELPVIVKADVQGTVQAVTDSLKTLNS 524
+K E+DRL ++ +S E + VELP++VK+DVQGT QAV D+L+TLNS
Sbjct: 489 RKYEKDRLLKAEEARLEEAAARLETESEEGFVRVELPIVVKSDVQGTAQAVADALRTLNS 548
Query: 525 PQGFVNIVHVGGGPISQSDVDLAKACGACIVGFNIKSPPTSITQAATRSNIKVILHRVIY 584
PQ VNIVH G G IS SD+DLA+ACGACIVGFN+K T AA + ++KV HRVIY
Sbjct: 549 PQVSVNIVHSGVGAISHSDLDLAQACGACIVGFNVKGGSTGNLSAA-QGSVKVFHHRVIY 607
Query: 585 HLLEDIGDVIIEKAPGTSETHVSGQAEVLNIFEVKGSKTKGPD-VKIAGCRVVDGFVARS 643
HLLEDIG++I+EKAPG SE VSG+AEVL+IF++ G + D V IAGC+V+DG V RS
Sbjct: 608 HLLEDIGNLIVEKAPGVSEMEVSGEAEVLSIFKILGKRRTEEDGVNIAGCKVMDGRVCRS 667
Query: 644 GTIRLLRSGEVMFEGPCASLKREKQDVDTVKKGNECGLVISDWHDFQIGDVIQCLEQVIR 703
G +RLLRSGEV+FEG CASLKREKQDV+ V KGNECGLV DW+DF++GDVIQC+E VIR
Sbjct: 668 GLMRLLRSGEVVFEGSCASLKREKQDVEQVGKGNECGLVFGDWNDFRVGDVIQCMEPVIR 727
Query: 704 KPKFIKSESGAVRIEC 719
KPKFI SESGAVRIEC
Sbjct: 728 KPKFISSESGAVRIEC 743
>AT1G17220.1 | Symbols: FUG1 | Translation initiation factor 2, small
GTP-binding protein | chr1:5885383-5890165 FORWARD
LENGTH=1026
Length = 1026
Score = 339 bits (869), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 208/516 (40%), Positives = 306/516 (59%), Gaps = 18/516 (3%)
Query: 199 RPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHIGAFVVVMPSGA---SITFLDT 255
RP V+T+MGHVDHGKT+LLD +R++ VAA EAGGITQ IGA+ V +P S FLDT
Sbjct: 500 RPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDT 559
Query: 256 PGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIVVAINKCDKPGA 315
PGH VTDI ++VVAADDG+ PQT EA++HAKAA VPIV+AINK DK GA
Sbjct: 560 PGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVPIVIAINKIDKEGA 619
Query: 316 NPERVKLQMASEGLLLEEMGGDIQVVEVSATAKTGLDNLEEALVLQADMMELKARVDGPA 375
+P+RV +++S GL+ E+ GGD+ +V++SA +D+L E ++L A++ ELKA A
Sbjct: 620 SPDRVMQELSSIGLMPEDWGGDVPMVQISALKGENVDDLLETVMLVAELQELKANPHRNA 679
Query: 376 QAYVVEARLDKGRGPLVTTIVKAGTLVCGQYVVVGSQWGRIKAIKDMVGRLTQRATPAMP 435
+ V+EA LDK +GP T IV+ GTL G VV G +G+++A+ D G A P++P
Sbjct: 680 KGIVIEAGLDKAKGPFATFIVQKGTLKRGDVVVCGEAFGKVRALFDHSGERVDEAGPSIP 739
Query: 436 VEIEGLRGLPMAGDDVIVVHSEERARMLSSGRKKKAEEDRLRNKMIPDNPTTSDDSVEVP 495
V++ GL +P+AGD+ +V S + AR ++ R ++R+ K T S + V
Sbjct: 740 VQVIGLNNVPIAGDEFEIVSSLDVAREMAEARAVSLRDERISAKAGDGKVTLSSLASAVS 799
Query: 496 LTV-------ELPVIVKADVQGTVQAVTDSLKTLNSPQGFVNIVHVGGGPISQSDVDLAK 548
+L +I+K DVQG+++AV +L+ L + + G +S SDVDLA
Sbjct: 800 AKKMSGLDLHQLNIILKVDVQGSIEAVRQALQVLPQENVTLKFLLQATGDVSNSDVDLAS 859
Query: 549 ACGACIVGFNIKSPPTSITQAATRSNIKVILHRVIYHLLEDIGDVIIEKAPGTSETHVSG 608
A A + GFN+K+ S+ +AA +++ L+RVIY L++D+ + + E G
Sbjct: 860 ASEAIVFGFNVKA-SGSVKKAAENKGVEIRLYRVIYELIDDVRNAMEGLLESVEEQIPIG 918
Query: 609 QAEVLNIFEVKGSKTKGPDVKIAGCRVVDGFVARSGTIRLLRSGEVMFEGPCASLKREKQ 668
AEV F S G ++AGC V +G + IR++R G+ + G SLKR K+
Sbjct: 919 SAEVRATF----SSGSG---RVAGCMVNEGKFVKDCGIRVVRKGKTVHVGVLDSLKRVKE 971
Query: 669 DVDTVKKGNECGLVISDWHDFQIGDVIQCLEQVIRK 704
+V V G ECG+ + D+ D+ GD+I+ V ++
Sbjct: 972 NVKEVSAGLECGIGMDDYDDWIEGDIIEAFNAVQKR 1007
>AT1G76810.1 | Symbols: | eukaryotic translation initiation factor 2
(eIF-2) family protein | chr1:28831366-28836310 REVERSE
LENGTH=1294
Length = 1294
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 154/570 (27%), Positives = 238/570 (41%), Gaps = 104/570 (18%)
Query: 189 HSTEGNEVLPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHIGAFVVVMPSG- 247
S EG E L P + +MGHVD GKT LLD +R T+V EAGGITQ IGA P+
Sbjct: 695 ESIEGEENLRSP-ICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGA--TYFPAEN 751
Query: 248 ----------------ASITFLDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLE 291
+ +DTPGH + D+ +LVV G+ PQT+E
Sbjct: 752 IRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSSLCDLAILVVDIMHGLEPQTIE 811
Query: 292 AMSHAKAANVPIVVAINKCD---------------------KPGANPERVKL-----QMA 325
+++ + N +VA+NK D K N ++L +
Sbjct: 812 SLNLLRMRNTEFIVALNKVDRLYGWKTCKNAPIVKAMKQQNKDVINEFNLRLKNIINEFQ 871
Query: 326 SEGLLLE------EMGGDIQVVEVSATAKTGLDNLEEALV--LQADMMELKARVDGPAQA 377
+GL E +MG +V SA + G+ +L LV Q M+E VD Q
Sbjct: 872 EQGLNTELYYKNKDMGDTFSIVPTSAISGEGVPDLLLWLVQWAQKTMVEKLTYVD-EVQC 930
Query: 378 YVVEARLDKGRGPLVTTIVKAGTLVCG-QYVVVGSQWGRIKAIKDMV-----GRLTQRAT 431
V+E ++ +G G + ++ G L G Q VV G Q + I+ ++ L + T
Sbjct: 931 TVLEVKVIEGHGTTIDVVLVNGELHEGDQIVVCGLQGPIVTTIRALLTPHPMKELRVKGT 990
Query: 432 PAMPVEIEGLRGL---------PMAGDDVIVVHSEERARMLSSGRKKKAEEDRLRNKMIP 482
EI+ +G+ +AG + VV ++ + K+ A ED +
Sbjct: 991 YLHYKEIKAAQGIKITAQGLEHAIAGTALHVVGPDDDIEAI----KESAMED------ME 1040
Query: 483 DNPTTSDDSVEVPLTVELPVIVKADVQGTVQAVTDSLKTLNSPQGFVNIVHVGGGPISQS 542
+ D S E V V+A G+++A+ L+ L SP + + +G GP+ +
Sbjct: 1041 SVLSRIDKSGE-------GVYVQASTLGSLEAL---LEYLKSPAVKIPVSGIGIGPVHKK 1090
Query: 543 DVDLA------KACGACIVGFNIKSPPTSITQAATRSNIKVILHRVIYHLLEDIGDVIIE 596
DV A K A I+ F++K T + A +K+ +IYHL D+ IE
Sbjct: 1091 DVMKAGVMLERKKEYATILAFDVKV-TTEARELADEMGVKIFCADIIYHLF-DLFKAYIE 1148
Query: 597 KAPGTSETHVSGQAE---VLNIFEVKGSKTKGPDVKIAGCRVVDGFVARSGTIRLLRSGE 653
+ + +A VL I K P V G V++G + + GT + E
Sbjct: 1149 NIKEEKKKESADEAVFPCVLQILPNCVFNKKDPIV--LGVDVIEGIL-KIGTPICVPGRE 1205
Query: 654 VMFEGPCASLKREKQDVDTVKKGNECGLVI 683
+ G AS++ + VD KKGN+ + I
Sbjct: 1206 FIDIGRIASIENNHKPVDYAKKGNKVAIKI 1235
>AT1G21160.1 | Symbols: | eukaryotic translation initiation factor
2 (eIF-2) family protein | chr1:7408121-7412455 REVERSE
LENGTH=1092
Length = 1092
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 196/455 (43%), Gaps = 82/455 (18%)
Query: 199 RPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHIGAFVV----------VMPSGA 248
R + +MGHVD GKT LLD +R T+V EAGGITQ IGA + + A
Sbjct: 496 RSPICCIMGHVDSGKTKLLDCIRGTNVQEGEAGGITQQIGATFFPAENIRERTKELQANA 555
Query: 249 S-----ITFLDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPI 303
I +DTPGH + D+ +LVV G+ PQT+E+++ + NV
Sbjct: 556 KLKVPGILVIDTPGHESFTNLRSRGSNLCDLAILVVDIMRGLEPQTIESLNLLRRRNVKF 615
Query: 304 VVAINKCD------KPGANP--------------------ERVKLQMASEGL--LL---- 331
++A+NK D K P RV+ Q +GL +L
Sbjct: 616 IIALNKVDRLYGWEKSKNAPIRKTMMQQTGDVVKEFKMRLNRVQNQFQEQGLNSMLYYKN 675
Query: 332 EEMGGDIQVVEVSATAKTGLDNLEEALV--LQADMMELKARVDGPAQAYVVEARLDKGRG 389
EMG I ++ SA + G+ +L LV Q M+E VD Q V+E ++ +G G
Sbjct: 676 REMGETISILPASAISGEGIPDLLLFLVQWAQKTMVEKLTYVD-KVQCTVLEVKVIEGHG 734
Query: 390 PLVTTIVKAGTLVCG-QYVVVGSQWGRIKAIKDMVG-------RLTQRATPAMPVEIEGL 441
V ++ G L G Q VV GSQ + I+ ++ R+T P E++
Sbjct: 735 ITVDVVLVNGVLREGDQIVVCGSQGPIVTTIRSLLTPYPMNEMRVTGTYMPHR--EVKAA 792
Query: 442 RGLPMAGDDVIVVHSEERARMLSSGRKKKAEEDRLRNKM--IPDNPTTSDDSVEVPLTVE 499
+G+ +A + H+ + G + EE + +N M I D S E
Sbjct: 793 QGIKIAAQG--LEHAIAGTALHVIGPNEDMEEAK-KNAMEDIESVMNRIDKSGE------ 843
Query: 500 LPVIVKADVQGTVQAVTDSLKTLNSPQGFVNIVHVGGGPISQSDVDLA------KACGAC 553
V V+A G+++A+ L+ L S + + +G GP+ + D+ A K A
Sbjct: 844 -GVYVQASTLGSLEAL---LEFLKSSDVKIPVSGIGIGPVHKKDIMKAGVMLEKKKEFAT 899
Query: 554 IVGFNIKSPPTSITQAATRSNIKVILHRVIYHLLE 588
I+ F++K + + A + +K+ IY L +
Sbjct: 900 ILAFDVKISAEA-RELADKMGVKIFCDDTIYCLFD 933
>AT1G76820.1 | Symbols: | eukaryotic translation initiation factor 2
(eIF-2) family protein | chr1:28837796-28842343 FORWARD
LENGTH=1166
Length = 1166
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 146/565 (25%), Positives = 233/565 (41%), Gaps = 100/565 (17%)
Query: 192 EGNEVLPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHIGAFVVVMPSG---- 247
EG E L R + +MGHVD GKT LLD +R T+V EAGGITQ IGA P+
Sbjct: 570 EGGEKL-RSIICCIMGHVDSGKTKLLDCIRGTNVQEGEAGGITQQIGA--TYFPAKNIRE 626
Query: 248 -------------ASITFLDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLEAMS 294
+ +DTPGH + D+ +LVV G+ PQT+E+++
Sbjct: 627 RTRELKADAKLKVPGLLVIDTPGHESFTNLRSRGSSLCDLAILVVDITHGLQPQTIESLN 686
Query: 295 HAKAANVPIVVAINKCD---------------------KPGANPERVKL-----QMASEG 328
+ N ++A+NK D K N ++L + +G
Sbjct: 687 LLRMRNTEFIIALNKVDRLYGWKTCKNAPIVKAMKQQNKDVINEFNLRLKKIINEFQEQG 746
Query: 329 LLLE------EMGGDIQVVEVSATAKTGLDNLEEALV--LQADMMELKARVDGPAQAYVV 380
L E +MG +V SA + G+ +L LV Q M+E VD Q V+
Sbjct: 747 LNTELYYKNKDMGETFSIVPTSAISGEGVPDLLLWLVQWAQKTMVEKLTYVD-EVQCTVL 805
Query: 381 EARLDKGRGPLVTTIVKAGTLVCG-QYVVVGSQWGRIKAIKDMV-----GRLTQRATPAM 434
E ++ +G G + ++ G L G Q VV G Q + I+ ++ L + T
Sbjct: 806 EVKVIEGHGTTIDVVLVNGELHEGDQIVVCGLQGPIVTTIRALLTPHPMKELRVKGTYLH 865
Query: 435 PVEIEGLRGLP---------MAGDDVIVVHSEERARMLSSGRKKKAEEDRLRNKMIPDNP 485
EI+ +G+ +AG + VV ++ + K+ A ED +
Sbjct: 866 HKEIKAAQGIKITAQGLEHAIAGTSLHVVGPDDDIEAM----KESAMED------MESVL 915
Query: 486 TTSDDSVEVPLTVELPVIVKADVQGTVQAVTDSLKTLNSPQGFVNIVHVGGGPISQSDVD 545
+ D S E V V+ G+++A+ + LKT P + + +G GP+ + D+
Sbjct: 916 SRIDKSGE-------GVYVQTSTLGSLEALLEFLKT---PAVNIPVSGIGIGPVHKKDIM 965
Query: 546 LA------KACGACIVGFNIKSPPTSITQAATRSNIKVILHRVIYHLLEDIGDVIIEKAP 599
A K A I+ F++K T + A +K+ +IY L V IE
Sbjct: 966 KAGVMLEKKKEYATILAFDVKV-TTEARELADEMGVKIFCADIIYQLFNQF-QVYIENIK 1023
Query: 600 GTSETHVSGQAEVLNIFEV-KGSKTKGPDVKIAGCRVVDGFVARSGTIRLLRSGEVMFEG 658
+ +G+A + ++ D I G +V DG + + GT + E G
Sbjct: 1024 EEKKKESAGEAVFPCVLQILPNCVFNKRDPIILGVKVHDGIL-KIGTPICVPGREFTDIG 1082
Query: 659 PCASLKREKQDVDTVKKGNECGLVI 683
AS++ + VD +KG+E + I
Sbjct: 1083 RIASIENNHKPVDYAEKGDEVAIKI 1107
>AT1G76720.1 | Symbols: | eukaryotic translation initiation factor
2 (eIF-2) family protein | chr1:28794144-28798780
REVERSE LENGTH=1191
Length = 1191
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 118/276 (42%), Gaps = 55/276 (19%)
Query: 192 EGNEVLPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHIGAFVVVMPSG---- 247
EG E L R + +MGHVD GKT LLD +R T+V EAGGITQ IGA P+
Sbjct: 621 EGGENL-RSIICCIMGHVDSGKTKLLDCIRGTNVQEGEAGGITQQIGA--TYFPAKNIRE 677
Query: 248 -------------ASITFLDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLEAMS 294
+ +DTPGH + D+ +LVV G+ PQT+E+++
Sbjct: 678 RTRELKADAKLKVPGLLVIDTPGHESFTNLRSRGSSLCDLAILVVDIKHGLEPQTIESLN 737
Query: 295 HAKAANVPIVVAINKCD---------------------KPGANPERVKL-----QMASEG 328
+ N ++A+NK D K N ++L Q +G
Sbjct: 738 LLRMRNTEFIIALNKVDRLYGWKTCKNAPIVKAMKQQNKDVTNEFNIRLTDIITQFKEQG 797
Query: 329 LLLE------EMGGDIQVVEVSATAKTGLDNLEEALV--LQADMMELKARVDGPAQAYVV 380
L E EMG +V SA + G+ +L LV Q M+E VD Q V+
Sbjct: 798 LNTEIYYKNKEMGETFSIVPTSAKSGEGVPDLLLWLVQWAQKTMVEKLTYVD-EVQCTVL 856
Query: 381 EARLDKGRGPLVTTIVKAGTLVCGQYVVVGSQWGRI 416
E ++ +G G + ++ G L G +VV G I
Sbjct: 857 EVKVIEGHGTTIDVVLVNGELHEGDQIVVCGLQGPI 892
>AT5G39900.1 | Symbols: | Small GTP-binding protein |
chr5:15976719-15978925 REVERSE LENGTH=663
Length = 663
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 28/179 (15%)
Query: 204 TVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHIGAFVVVM------------------- 244
+++ H+DHGK++L D L + + K+ G Q++ V
Sbjct: 70 SIIAHIDHGKSTLADRLMELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYENKV 129
Query: 245 ----PSGASITFLDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLEAMSHAKAAN 300
SG + +DTPGH +LVV A GV QT+ A AN
Sbjct: 130 EDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQGVQAQTVANFYLAFEAN 189
Query: 301 VPIVVAINKCDKPGANPERVKLQMASEGLLLEEMGGDIQVVEVSATAKTGLDNLEEALV 359
+ IV INK D+P A+PERVK Q+ S L E V+ VSA GL+++ A++
Sbjct: 190 LTIVPVINKIDQPTADPERVKAQLKSMFDLDTE-----DVLLVSAKTGLGLEHVLPAVI 243
>AT2G27700.2 | Symbols: | eukaryotic translation initiation factor
2 family protein / eIF-2 family protein |
chr2:11813949-11816002 REVERSE LENGTH=480
Length = 480
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 115/276 (41%), Gaps = 52/276 (18%)
Query: 199 RPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHIGAFVVVMPSGASIT------- 251
R + +MGH+D GKT LLD + +V EAGG TQ +GA + + T
Sbjct: 35 RSPICCMMGHIDTGKTKLLDYI-TGNVQEGEAGGTTQKMGATYLSARNILEKTMELKSDT 93
Query: 252 --------FLDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPI 303
F+DTPG+ + D +LVV G+ PQT+E ++ + N
Sbjct: 94 KLKVPRPLFIDTPGYEFYTNLRSRGLGLCDFAILVVDIMHGLEPQTIECLNLLRMKNTEF 153
Query: 304 VVAINKCD---------------------KPGANPERVKL-----QMASEGLLLE----- 332
++A+NK D K N ++L Q +GL E
Sbjct: 154 IIALNKVDRLYGWRICENAPILEAMKQQTKDVINEFNMRLNEIINQFKEQGLNSELYYKN 213
Query: 333 -EMGGDIQVVEVSATAKTGLDNLEEALV--LQADMME-LKARVDGPAQAYVVEARLDKGR 388
EMG +V A + G+ +L LV Q M+E L VD Q V+E ++ +G
Sbjct: 214 KEMGETFSIVPTCAISGEGIPDLLLLLVQLTQKTMVEKLITYVDKVQQCTVLEVKVMEGY 273
Query: 389 GPLVTTIVKAGTL-VCGQYVVVGSQWGRIKAIKDMV 423
G + ++ G L GQ VV G Q + I+ ++
Sbjct: 274 GTTIDVVLVNGELHEGGQIVVCGLQGPIVTTIRALL 309
>AT2G27700.1 | Symbols: | eukaryotic translation initiation factor
2 family protein / eIF-2 family protein |
chr2:11813949-11816002 REVERSE LENGTH=479
Length = 479
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 116/276 (42%), Gaps = 53/276 (19%)
Query: 199 RPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHIGAFVVV----------MPSGA 248
R + +MGH+D GKT LLD + +V EAGG TQ +GA + + S
Sbjct: 35 RSPICCMMGHIDTGKTKLLDYI-TGNVQEGEAGGTTQKMGATYLSARNILEKTMELKSDT 93
Query: 249 SIT-----FLDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPI 303
+ F+DTPG+ + D +LVV G+ PQT+E ++ + N
Sbjct: 94 KLKVPRPLFIDTPGYEFYTNLRSRGLGLCDFAILVVDIMHGLEPQTIECLNLLRMKNTEF 153
Query: 304 VVAINKCD---------------------KPGANPERVKL-----QMASEGLLLE----- 332
++A+NK D K N ++L Q +GL E
Sbjct: 154 IIALNKVDRLYGWRICENAPILEAMKQQTKDVINEFNMRLNEIINQFKEQGLNSELYYKN 213
Query: 333 -EMGGDIQVVEVSATAKTGLDNLEEALV--LQADMME-LKARVDGPAQAYVVEARLDKGR 388
EMG +V A + G+ +L LV Q M+E L VD Q V+E ++ +G
Sbjct: 214 KEMGETFSIVPTCAISGEGIPDLLLLLVQLTQKTMVEKLITYVD-KVQCTVLEVKVMEGY 272
Query: 389 GPLVTTIVKAGTL-VCGQYVVVGSQWGRIKAIKDMV 423
G + ++ G L GQ VV G Q + I+ ++
Sbjct: 273 GTTIDVVLVNGELHEGGQIVVCGLQGPIVTTIRALL 308
>AT5G13650.1 | Symbols: | elongation factor family protein |
chr5:4397821-4402364 FORWARD LENGTH=675
Length = 675
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 41/240 (17%)
Query: 203 VTVMGHVDHGKTSLLDA-LRQTSVAAK---------EAGGITQHIGAFVVVMPSGASITF 252
+ ++ HVDHGKT+L+D+ LRQ V ++ + + G + ++ SIT+
Sbjct: 85 IAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERG--ITILSKNTSITY 142
Query: 253 -------LDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIVV 305
+DTPGH + D V+LVV + +G MPQT + A +VV
Sbjct: 143 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVV 202
Query: 306 AINKCDKPGANPERVKLQMASEGLLLEEMGG-----DIQVVEVSA-TAKTGL--DNLEEA 357
+NK D+P A PE V + S L E+ D Q + S K GL D+L E
Sbjct: 203 VVNKIDRPSARPEFV---VNSTFELFIELNATDEQCDFQAIYASGIKGKAGLSPDDLAED 259
Query: 358 LVLQADMMELKARV--------DGPAQAYVVEARLDKGRGPLVTTIVKAGTLVCGQYVVV 409
L + E R DG Q D+ +G + + AG L G V V
Sbjct: 260 L---GPLFEAIIRCVPGPNIEKDGALQMLATNIEYDEHKGRIAIGRLHAGVLRKGMDVRV 316
>AT5G13650.2 | Symbols: | elongation factor family protein |
chr5:4397821-4402364 FORWARD LENGTH=676
Length = 676
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 41/240 (17%)
Query: 203 VTVMGHVDHGKTSLLDA-LRQTSVAAK---------EAGGITQHIGAFVVVMPSGASITF 252
+ ++ HVDHGKT+L+D+ LRQ V ++ + + G + ++ SIT+
Sbjct: 86 IAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERG--ITILSKNTSITY 143
Query: 253 -------LDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIVV 305
+DTPGH + D V+LVV + +G MPQT + A +VV
Sbjct: 144 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVV 203
Query: 306 AINKCDKPGANPERVKLQMASEGLLLEEMGG-----DIQVVEVSA-TAKTGL--DNLEEA 357
+NK D+P A PE V + S L E+ D Q + S K GL D+L E
Sbjct: 204 VVNKIDRPSARPEFV---VNSTFELFIELNATDEQCDFQAIYASGIKGKAGLSPDDLAED 260
Query: 358 LVLQADMMELKARV--------DGPAQAYVVEARLDKGRGPLVTTIVKAGTLVCGQYVVV 409
L + E R DG Q D+ +G + + AG L G V V
Sbjct: 261 L---GPLFEAIIRCVPGPNIEKDGALQMLATNIEYDEHKGRIAIGRLHAGVLRKGMDVRV 317
>AT5G08650.1 | Symbols: | Small GTP-binding protein |
chr5:2806533-2813220 REVERSE LENGTH=681
Length = 681
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 31/210 (14%)
Query: 204 TVMGHVDHGKTSLLDALRQTS---------------VAAKEAGGITQHIGAF---VVVMP 245
+++ H+DHGK++L D L Q + + + GIT + A V
Sbjct: 90 SIIAHIDHGKSTLADKLLQVTGTVQNRDMKEQFLDNMDLERERGITIKLQAARMRYVYED 149
Query: 246 SGASITFLDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIVV 305
+ + +DTPGH + +LVV A GV QTL + A N+ I+
Sbjct: 150 TPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIP 209
Query: 306 AINKCDKPGANPERVKLQMASEGLLLEEMGGDIQVVEVSATAKTGLDNLEEALVLQADMM 365
+NK D PGA PE+V + +EE+ G + +AK G+ E +L A +
Sbjct: 210 VLNKIDLPGAEPEKVLRE-------IEEVIGLDCSKAIFCSAKEGIGITE---ILDAIVQ 259
Query: 366 ELKARVD---GPAQAYVVEARLDKGRGPLV 392
+ A +D P +A + ++ D RG +V
Sbjct: 260 RIPAPLDTAGKPLRALIFDSYYDPYRGVIV 289
>AT2G31060.3 | Symbols: | elongation factor family protein |
chr2:13213496-13218544 REVERSE LENGTH=671
Length = 671
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 15/132 (11%)
Query: 203 VTVMGHVDHGKTSLLD-ALRQT-----------SVAAKEAGGIT--QHIGAFVV-VMPSG 247
V V+ HVDHGKT+L+D LRQ S+ + GIT + FV +
Sbjct: 62 VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSINLERERGITISSKVSPFVTSIFWKD 121
Query: 248 ASITFLDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIVVAI 307
+ +DTPGH + + +LVV A +G + QT ++ A + ++ +
Sbjct: 122 NELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLL 181
Query: 308 NKCDKPGANPER 319
NK D+P ER
Sbjct: 182 NKVDRPSVTEER 193
>AT4G20360.1 | Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase
homolog E1B | chr4:10990036-10991466 FORWARD LENGTH=476
Length = 476
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 203 VTVMGHVDHGKTSLLDALRQ------TSVAAK----------EAGGITQHIGAFVVVMPS 246
+ +GHVDHGKT+L AL +SVA K A GIT + A V
Sbjct: 82 IGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGITINT-ATVEYETE 140
Query: 247 GASITFLDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLEAMSHAKAANVP-IVV 305
+D PGH D +LVV+ DG MPQT E + AK VP +VV
Sbjct: 141 NRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPDMVV 200
Query: 306 AINKCDK 312
+NK D+
Sbjct: 201 FLNKEDQ 207
>AT2G31060.2 | Symbols: | elongation factor family protein |
chr2:13213496-13218544 REVERSE LENGTH=667
Length = 667
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 203 VTVMGHVDHGKTSLLD-ALRQT-----------SVAAKEAGGITQHIGAFVV-VMPSGAS 249
V V+ HVDHGKT+L+D LRQ S+ + GIT I + V +
Sbjct: 62 VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSINLERERGIT--ISSKVTSIFWKDNE 119
Query: 250 ITFLDTPGHXXXXXXXXXXXXVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIVVAINK 309
+ +DTPGH + + +LVV A +G + QT ++ A + ++ +NK
Sbjct: 120 LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNK 179
Query: 310 CDKPGANPER 319
D+P ER
Sbjct: 180 VDRPSVTEER 189