Miyakogusa Predicted Gene

Lj1g3v4763800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4763800.1 Non Chatacterized Hit- tr|I3SG74|I3SG74_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.53,0,S7_S5_E_A: ribosomal protein S7,Ribosomal protein S5/S7,
eukaryotic/archaeal; no description,Ribosom,CUFF.33171.1
         (204 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37270.2 | Symbols: ATRPS5B, RPS5B | ribosomal protein 5B | c...   375   e-105
AT2G37270.1 | Symbols: ATRPS5B, RPS5B | ribosomal protein 5B | c...   375   e-105
AT3G11940.2 | Symbols: ATRPS5A, AML1, RPS5A | ribosomal protein ...   375   e-104
AT3G11940.1 | Symbols: ATRPS5A, AML1, RPS5A | ribosomal protein ...   375   e-104
ATCG00900.1 | Symbols: RPS7.1, RPS7 | Ribosomal protein S7p/S5e ...    58   4e-09
ATCG01240.1 | Symbols: RPS7.2 | ribosomal protein S7 | chrC:1407...    58   4e-09

>AT2G37270.2 | Symbols: ATRPS5B, RPS5B | ribosomal protein 5B |
           chr2:15647883-15649042 REVERSE LENGTH=207
          Length = 207

 Score =  375 bits (964), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 176/190 (92%), Positives = 186/190 (97%)

Query: 15  EVKLFNRWSYDDVQVTDISLADYVGVVASKHATYVPHTAGRYSVKRFRKAQCPIIERLTN 74
           EVKLFNRWS+DDV VTDISL DY+GV  SKHAT+VPHTAGRYSVKRFRKAQCPI+ERLTN
Sbjct: 18  EVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRKAQCPIVERLTN 77

Query: 75  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVV 134
           SLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA++NSGPREDATRIGSAGVV
Sbjct: 78  SLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVV 137

Query: 135 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 194
           RRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 138 RRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197

Query: 195 EIERVAKANR 204
           EIERVAKANR
Sbjct: 198 EIERVAKANR 207


>AT2G37270.1 | Symbols: ATRPS5B, RPS5B | ribosomal protein 5B |
           chr2:15647883-15649042 REVERSE LENGTH=207
          Length = 207

 Score =  375 bits (964), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 176/190 (92%), Positives = 186/190 (97%)

Query: 15  EVKLFNRWSYDDVQVTDISLADYVGVVASKHATYVPHTAGRYSVKRFRKAQCPIIERLTN 74
           EVKLFNRWS+DDV VTDISL DY+GV  SKHAT+VPHTAGRYSVKRFRKAQCPI+ERLTN
Sbjct: 18  EVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRKAQCPIVERLTN 77

Query: 75  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVV 134
           SLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA++NSGPREDATRIGSAGVV
Sbjct: 78  SLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVV 137

Query: 135 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 194
           RRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 138 RRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197

Query: 195 EIERVAKANR 204
           EIERVAKANR
Sbjct: 198 EIERVAKANR 207


>AT3G11940.2 | Symbols: ATRPS5A, AML1, RPS5A | ribosomal protein 5A
           | chr3:3778175-3779354 REVERSE LENGTH=207
          Length = 207

 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 175/190 (92%), Positives = 187/190 (98%)

Query: 15  EVKLFNRWSYDDVQVTDISLADYVGVVASKHATYVPHTAGRYSVKRFRKAQCPIIERLTN 74
           EVKLFNRW+YDDV VTDISL DY+GV A+KHAT+VPHTAGRYSVKRFRKAQCPI+ERLTN
Sbjct: 18  EVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYSVKRFRKAQCPIVERLTN 77

Query: 75  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVV 134
           SLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA++NSGPREDATRIGSAGVV
Sbjct: 78  SLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVV 137

Query: 135 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 194
           RRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 138 RRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197

Query: 195 EIERVAKANR 204
           EIERVAKANR
Sbjct: 198 EIERVAKANR 207


>AT3G11940.1 | Symbols: ATRPS5A, AML1, RPS5A | ribosomal protein 5A
           | chr3:3778175-3779354 REVERSE LENGTH=207
          Length = 207

 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 175/190 (92%), Positives = 187/190 (98%)

Query: 15  EVKLFNRWSYDDVQVTDISLADYVGVVASKHATYVPHTAGRYSVKRFRKAQCPIIERLTN 74
           EVKLFNRW+YDDV VTDISL DY+GV A+KHAT+VPHTAGRYSVKRFRKAQCPI+ERLTN
Sbjct: 18  EVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYSVKRFRKAQCPIVERLTN 77

Query: 75  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVV 134
           SLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA++NSGPREDATRIGSAGVV
Sbjct: 78  SLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVV 137

Query: 135 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 194
           RRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 138 RRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197

Query: 195 EIERVAKANR 204
           EIERVAKANR
Sbjct: 198 EIERVAKANR 207


>ATCG00900.1 | Symbols: RPS7.1, RPS7 | Ribosomal protein S7p/S5e
           family protein | chrC:97478-97945 REVERSE LENGTH=155
          Length = 155

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 9/136 (6%)

Query: 71  RLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGP--REDATRI 128
           RL N L+     +GKK +A +II  A++ I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 129 GSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188
           G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 133

Query: 189 AIKKKDEIERVAKANR 204
           AI+KK+E  R+A+ANR
Sbjct: 134 AIRKKEETHRMAEANR 149


>ATCG01240.1 | Symbols: RPS7.2 | ribosomal protein S7 |
           chrC:140704-141171 FORWARD LENGTH=155
          Length = 155

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 9/136 (6%)

Query: 71  RLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGP--REDATRI 128
           RL N L+     +GKK +A +II  A++ I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 129 GSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188
           G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 133

Query: 189 AIKKKDEIERVAKANR 204
           AI+KK+E  R+A+ANR
Sbjct: 134 AIRKKEETHRMAEANR 149