Miyakogusa Predicted Gene

Lj1g3v4528610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4528610.1 Non Chatacterized Hit- tr|Q60B25|Q60B25_METCA
Putative uncharacterized protein OS=Methylococcus
caps,50,4e-19,Cupin_3,Domain of unknown function DUF861, cupin-3;
RmlC-like cupins,RmlC-like cupin domain; no desc,CUFF.32582.1
         (111 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G04300.1 | Symbols:  | RmlC-like cupins superfamily protein |...   144   1e-35
AT4G10300.1 | Symbols:  | RmlC-like cupins superfamily protein |...   132   3e-32
AT4G28703.1 | Symbols:  | RmlC-like cupins superfamily protein |...   130   1e-31
AT4G10280.1 | Symbols:  | RmlC-like cupins superfamily protein |...    74   2e-14
AT4G10290.1 | Symbols:  | RmlC-like cupins superfamily protein |...    60   4e-10
AT2G32180.1 | Symbols: PTAC18 | plastid transcriptionally active...    56   5e-09
AT2G32650.2 | Symbols:  | RmlC-like cupins superfamily protein |...    56   5e-09
AT2G32650.1 | Symbols:  | RmlC-like cupins superfamily protein |...    56   5e-09

>AT3G04300.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr3:1140318-1140723 FORWARD LENGTH=96
          Length = 96

 Score =  144 bits (363), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 65/91 (71%), Positives = 75/91 (82%)

Query: 10  LRISIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFV 69
           + I IE NPS  RL++L +  WPKW C PGKY L F+  ETCYL+KGKVK YPKGSSEFV
Sbjct: 1   MNIVIENNPSSRRLSDLGVMSWPKWSCQPGKYALVFEERETCYLVKGKVKVYPKGSSEFV 60

Query: 70  EFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 100
           EFGAGDLVTIPKGLSCTWDVS+ +DK+YKF+
Sbjct: 61  EFGAGDLVTIPKGLSCTWDVSLFIDKHYKFD 91


>AT4G10300.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr4:6384564-6385946 FORWARD LENGTH=134
          Length = 134

 Score =  132 bits (333), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 74/97 (76%)

Query: 4   SDSNSNLRISIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPK 63
           ++S   L I+IE+NP +S+L +L ++ WPKWGC P K+   + A+ETCYLL+GKVK YP 
Sbjct: 38  AESTEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGKVKVYPN 97

Query: 64  GSSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 100
           GS E VE  AGD V  PKG+SCTWDVSVAVDK+Y+FE
Sbjct: 98  GSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE 134


>AT4G28703.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr4:14166365-14166798 FORWARD LENGTH=107
          Length = 107

 Score =  130 bits (328), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/103 (62%), Positives = 77/103 (74%), Gaps = 9/103 (8%)

Query: 6   SNSNLRISIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGS 65
           ++ N RI +E+NPSQ+RL EL  K WPKWGCSPGKY LK++AEE CY+L+GKVK YPK  
Sbjct: 2   ADQNPRIIVEQNPSQARLDELKFKSWPKWGCSPGKYHLKYEAEEICYILRGKVKVYPKPP 61

Query: 66  SEF---------VEFGAGDLVTIPKGLSCTWDVSVAVDKYYKF 99
                       VEFGAGD+VT PKGLSCTWDVS++VDK+Y F
Sbjct: 62  PSSSSDAEVEWCVEFGAGDIVTFPKGLSCTWDVSLSVDKHYIF 104


>AT4G10280.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr4:6375220-6375996 REVERSE LENGTH=140
          Length = 140

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 6/105 (5%)

Query: 2   ASSDSNSNLRIS---IERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKV 58
            SSDS     I    I R  S ++LA+L +  WPKW  +P K+  +F   ET Y ++GKV
Sbjct: 35  VSSDSEIPTEIHGVKILRQASDTKLAQLGVASWPKWEGAPSKFPWEFKKTETIYFMEGKV 94

Query: 59  KAYPKG---SSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 100
           K    G     E  E G GD+V  PK +   W+++ AV K Y  E
Sbjct: 95  KVNVDGYDEEEETFEIGKGDVVVFPKDMKVVWEITEAVKKQYSLE 139


>AT4G10290.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr4:6379958-6381720 REVERSE LENGTH=120
          Length = 120

 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 12  ISIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSS---EF 68
           + + R  S ++LAEL +  W  W   P K+  KF   ET Y ++GK+K   +      E 
Sbjct: 20  VKVMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTETMYFVEGKLKVKVEDHHKEGEA 79

Query: 69  VEFGAGDLVTIPKGLSCTWDVSVAVDKYY 97
           +EF AGDLV  P+ ++   DV   V K Y
Sbjct: 80  LEFVAGDLVVFPQDMNVFVDVIEDVKKRY 108


>AT2G32180.1 | Symbols: PTAC18 | plastid transcriptionally active 18
           | chr2:13672362-13672781 REVERSE LENGTH=139
          Length = 139

 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 40/72 (55%)

Query: 12  ISIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEF 71
           + +ER  SQ RL EL +  W  W     K    +  ++  Y+ +G+V+  P+GS  +++F
Sbjct: 46  VKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLVYIEQGEVRVVPEGSKRYMQF 105

Query: 72  GAGDLVTIPKGL 83
            AGDLV  PK L
Sbjct: 106 LAGDLVRYPKWL 117


>AT2G32650.2 | Symbols:  | RmlC-like cupins superfamily protein |
           chr2:13851547-13851966 FORWARD LENGTH=139
          Length = 139

 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 40/72 (55%)

Query: 12  ISIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEF 71
           + +ER  SQ RL EL +  W  W     K    +  ++  Y+ +G+V+  P+GS  +++F
Sbjct: 46  VKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLVYIEQGEVRVVPEGSKRYMQF 105

Query: 72  GAGDLVTIPKGL 83
            AGDLV  PK L
Sbjct: 106 LAGDLVRYPKWL 117


>AT2G32650.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr2:13851547-13851966 FORWARD LENGTH=139
          Length = 139

 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 40/72 (55%)

Query: 12  ISIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEF 71
           + +ER  SQ RL EL +  W  W     K    +  ++  Y+ +G+V+  P+GS  +++F
Sbjct: 46  VKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLVYIEQGEVRVVPEGSKRYMQF 105

Query: 72  GAGDLVTIPKGL 83
            AGDLV  PK L
Sbjct: 106 LAGDLVRYPKWL 117