Miyakogusa Predicted Gene

Lj1g3v4431070.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4431070.1 Non Chatacterized Hit- tr|B9FNH5|B9FNH5_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,33.03,0.0000007, ,CUFF.32336.1
         (209 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G03180.1 | Symbols:  | unknown protein; Has 36 Blast hits to ...   204   4e-53
AT1G03180.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   203   6e-53

>AT1G03180.1 | Symbols:  | unknown protein; Has 36 Blast hits to 36
           proteins in 15 species: Archae - 0; Bacteria - 0;
           Metazoa - 3; Fungi - 0; Plants - 33; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr1:773543-775179 FORWARD LENGTH=265
          Length = 265

 Score =  204 bits (518), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/211 (50%), Positives = 142/211 (67%), Gaps = 9/211 (4%)

Query: 1   MHSEIKELEIALGS-EVKASFRRKHVSKMREIKVGIKRLDKLMKSLLNLQTAIKVMINEN 59
           + +E  +LE  L   +VK   RRK +S+ RE+K  IK+L+KLMK++ +L++A+++MI E 
Sbjct: 62  LQTEFMDLETNLAEPQVKPLVRRKLMSRKREVKNEIKKLEKLMKTISSLRSALQLMIREA 121

Query: 60  PNIEEVILALGASPVRPQHIFVLNFPPGL-AVSKVEDDFARSKVAEGLSRKAIQSFISKG 118
           P I++V+L LG SP+RPQ+ + L F      V   E DFA+SK AE LS+K I++ IS G
Sbjct: 122 PGIQKVVLILGGSPLRPQNAYELLFTQRRDHVLGYEGDFAKSKAAEALSKKTIRALISTG 181

Query: 119 AGSVIYPGPIKLFVLIKAPCSFNQPLHFLPKRDFRYNRKVVPLKLLIKCRNQDQEVANQD 178
           AGS  YPGP++LF+L+ AP + N P HFLPKRDFRYNRK VP KL  KCR        QD
Sbjct: 182 AGSTSYPGPMRLFILVHAPPTLNLPQHFLPKRDFRYNRKFVPSKLRFKCR-------TQD 234

Query: 179 QEVAASTSEDLIWFQCRHVIKGLAMNITQEE 209
               +  + DLIW+QCRHVIKGLA +   EE
Sbjct: 235 NATNSPPTNDLIWYQCRHVIKGLAFHQPVEE 265


>AT1G03180.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: mitochondrion;
           EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8
           growth stages; Has 35333 Blast hits to 34131 proteins in
           2444 species: Archae - 798; Bacteria - 22429; Metazoa -
           974; Fungi - 991; Plants - 531; Viruses - 0; Other
           Eukaryotes - 9610 (source: NCBI BLink). |
           chr1:773989-775179 FORWARD LENGTH=251
          Length = 251

 Score =  203 bits (517), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 106/211 (50%), Positives = 142/211 (67%), Gaps = 9/211 (4%)

Query: 1   MHSEIKELEIALGS-EVKASFRRKHVSKMREIKVGIKRLDKLMKSLLNLQTAIKVMINEN 59
           + +E  +LE  L   +VK   RRK +S+ RE+K  IK+L+KLMK++ +L++A+++MI E 
Sbjct: 48  LQTEFMDLETNLAEPQVKPLVRRKLMSRKREVKNEIKKLEKLMKTISSLRSALQLMIREA 107

Query: 60  PNIEEVILALGASPVRPQHIFVLNFPPGL-AVSKVEDDFARSKVAEGLSRKAIQSFISKG 118
           P I++V+L LG SP+RPQ+ + L F      V   E DFA+SK AE LS+K I++ IS G
Sbjct: 108 PGIQKVVLILGGSPLRPQNAYELLFTQRRDHVLGYEGDFAKSKAAEALSKKTIRALISTG 167

Query: 119 AGSVIYPGPIKLFVLIKAPCSFNQPLHFLPKRDFRYNRKVVPLKLLIKCRNQDQEVANQD 178
           AGS  YPGP++LF+L+ AP + N P HFLPKRDFRYNRK VP KL  KCR        QD
Sbjct: 168 AGSTSYPGPMRLFILVHAPPTLNLPQHFLPKRDFRYNRKFVPSKLRFKCR-------TQD 220

Query: 179 QEVAASTSEDLIWFQCRHVIKGLAMNITQEE 209
               +  + DLIW+QCRHVIKGLA +   EE
Sbjct: 221 NATNSPPTNDLIWYQCRHVIKGLAFHQPVEE 251