Miyakogusa Predicted Gene

Lj1g3v4204450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4204450.1 Non Chatacterized Hit- tr|I1J6T4|I1J6T4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,37.14,8e-18,DUF4283,Domain of unknown function DUF4283;
zf-CCHC_4,Zinc knuckle CX2CX4HX4C; seg,NULL; ZF_CCHC,Zin,CUFF.32057.1
         (201 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01050.1 | Symbols:  | zinc ion binding;nucleic acid binding ...   111   3e-25

>AT2G01050.1 | Symbols:  | zinc ion binding;nucleic acid binding |
           chr2:68337-69884 REVERSE LENGTH=515
          Length = 515

 Score =  111 bits (277), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 72/122 (59%)

Query: 3   GGPWMVFDHYLAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPI 62
           GGPW V  +YL V  WS  F      +  T  W+R+  +   +Y+   L+  AR +G+P+
Sbjct: 135 GGPWRVLGNYLLVQDWSSRFDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPL 194

Query: 63  KLDRSTLKAERGRFARICVELDLDKPVVGKICLEDYWYKVEYEGLHVICTKCGCYGHRSR 122
           K+D +T+  ++GRFAR+C+E++L KP+ G + +    Y V YEGL  IC+ CG YGH   
Sbjct: 195 KVDMNTINFDKGRFARVCIEVNLAKPLKGTVLINGDRYFVAYEGLSKICSSCGIYGHLVH 254

Query: 123 EC 124
            C
Sbjct: 255 SC 256