Miyakogusa Predicted Gene

Lj1g3v3462910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3462910.1 CUFF.30774.1
         (164 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24650.1 | Symbols: ABI3, SIS10 | AP2/B3-like transcriptional...    66   1e-11

>AT3G24650.1 | Symbols: ABI3, SIS10 | AP2/B3-like transcriptional
           factor family protein | chr3:8997911-9000780 FORWARD
           LENGTH=720
          Length = 720

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 76/162 (46%), Gaps = 28/162 (17%)

Query: 9   DDLLGVNDATASMFYSDFPSLPDFSCMXXXXXXXXXTPALPLNNIXXXXXXXXXXXXXXX 68
           DDL+  +D   S+FY D P+LPDF CM         +PA P+N I               
Sbjct: 58  DDLIVHHDP--SIFYGDLPTLPDFPCMSSSSSSST-SPA-PVNAIVSSASSSSAASSSTS 113

Query: 69  XXXXXWAVLKSDAD--VEEKNGYMXXXXXXXXXDPIDHAITRTPVTGALSSTASMEI--- 123
                WA+L+SD +     +N Y                      +GAL STASMEI   
Sbjct: 114 SAAS-WAILRSDGEDPTPNQNQYASGNCDDS--------------SGALQSTASMEIPLD 158

Query: 124 -SQQQHDPVIVGDCMDGVMEMDTFGYMELLEANEFFDPASIF 164
            SQ        GDC+D    M+TFGYM+LL++NEFFD ++IF
Sbjct: 159 SSQGFGCGEGGGDCID---MMETFGYMDLLDSNEFFDTSAIF 197