Miyakogusa Predicted Gene
- Lj1g3v3244520.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3244520.2 Non Chatacterized Hit- tr|I3SA13|I3SA13_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.51,0,RING/U-box,NULL; ZF_RING_CH,Zinc finger, RING-CH-type; no
description,Zinc finger, RING/FYVE/PHD-typ,CUFF.30255.2
(203 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01275.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 162 1e-40
AT2G01275.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 162 1e-40
AT5G38070.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 157 5e-39
AT2G02960.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 120 8e-28
AT2G02960.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 120 8e-28
AT2G02960.4 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 120 8e-28
AT2G02960.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 120 8e-28
AT5G62460.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 109 1e-24
AT1G02610.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 107 5e-24
AT1G14260.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 107 5e-24
AT1G14260.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 107 5e-24
AT3G47550.6 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 107 6e-24
AT3G47550.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 107 6e-24
AT3G47550.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 104 4e-23
AT2G02960.5 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 97 7e-21
AT3G47550.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 96 2e-20
AT4G02075.1 | Symbols: PIT1 | RING/FYVE/PHD zinc finger superfam... 95 4e-20
AT4G32670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 56 2e-08
AT2G45530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 3e-08
AT4G34100.2 | Symbols: | RING/U-box superfamily protein | chr4:... 54 6e-08
AT4G34100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 6e-08
AT5G60580.4 | Symbols: | RING/U-box superfamily protein | chr5:... 54 1e-07
AT5G60580.2 | Symbols: | RING/U-box superfamily protein | chr5:... 54 1e-07
AT5G60580.3 | Symbols: | RING/U-box superfamily protein | chr5:... 53 1e-07
AT5G60580.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 1e-07
AT3G06330.2 | Symbols: | RING/U-box superfamily protein | chr3:... 53 2e-07
AT3G06330.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 2e-07
AT2G37950.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 52 3e-07
AT3G06330.3 | Symbols: | RING/U-box superfamily protein | chr3:... 51 4e-07
AT5G18760.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 5e-07
AT5G03180.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT5G03180.2 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT3G09760.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 3e-06
>AT2G01275.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:142610-143809 REVERSE LENGTH=259
Length = 259
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 113/184 (61%), Gaps = 5/184 (2%)
Query: 3 EKIKSSPNTLVQCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQ 62
E +++ ++ +CRICHDED DSNMETPCSC G++KYAHR+CVQRWCN KGD TCEIC Q
Sbjct: 47 EMLRNGDLSMAECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQ 106
Query: 63 QLKGYVALPPAPLFHFGGSPINFGETTRMDLHNHQFIAMFTTNHEFTDPDFEYSAPSTRS 122
+ K PP PL G P++F + H+FI + + F D + S ST S
Sbjct: 107 EFKPDYTAPP-PLLELGHVPLHFRGNWGISQREHRFITVVPADSTFIDQPYPLS--STTS 163
Query: 123 LICYRXXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAII 182
IC R RHTLP+ +L+G+ + + TL+ LRI+G+++P+Y++ KA+
Sbjct: 164 FICCRSLVLIFMALLILRHTLPL--VLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVA 221
Query: 183 SIQR 186
+ +R
Sbjct: 222 TCRR 225
>AT2G01275.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:142610-143809 REVERSE LENGTH=259
Length = 259
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 113/184 (61%), Gaps = 5/184 (2%)
Query: 3 EKIKSSPNTLVQCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQ 62
E +++ ++ +CRICHDED DSNMETPCSC G++KYAHR+CVQRWCN KGD TCEIC Q
Sbjct: 47 EMLRNGDLSMAECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQ 106
Query: 63 QLKGYVALPPAPLFHFGGSPINFGETTRMDLHNHQFIAMFTTNHEFTDPDFEYSAPSTRS 122
+ K PP PL G P++F + H+FI + + F D + S ST S
Sbjct: 107 EFKPDYTAPP-PLLELGHVPLHFRGNWGISQREHRFITVVPADSTFIDQPYPLS--STTS 163
Query: 123 LICYRXXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAII 182
IC R RHTLP+ +L+G+ + + TL+ LRI+G+++P+Y++ KA+
Sbjct: 164 FICCRSLVLIFMALLILRHTLPL--VLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVA 221
Query: 183 SIQR 186
+ +R
Sbjct: 222 TCRR 225
>AT5G38070.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:15190254-15191588 FORWARD LENGTH=259
Length = 259
Score = 157 bits (397), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 10 NTLVQCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-GYV 68
+ VQCRICHDEDED+NM+TPCSC GTLK+AH CVQRWCN KGD CEIC+QQ K GY
Sbjct: 49 SKFVQCRICHDEDEDTNMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYT 108
Query: 69 ALPPAPLFHFGGSPINFGET---TRMDLHNHQFIAMFTTNHEFTDPDFEYSAPSTRSLIC 125
A P LFH+ G +NFG +DL N F+ T D D YS S SLIC
Sbjct: 109 A--PRQLFHYTGISMNFGSDWGIEGLDLRNPYFL---TWGDADDDHDL-YSFHSPTSLIC 162
Query: 126 YRXXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAIISIQ 185
R RH+LP+ +L G + +S+T+ L ++R +G+L+ Y+ K+ I IQ
Sbjct: 163 CRLIALLFVLLLFLRHSLPV--LLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSFIVIQ 220
Query: 186 RLQFVHEDHHSPMQSHEE 203
R + + S S EE
Sbjct: 221 RCRQERDTRLSGFSSDEE 238
>AT2G02960.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862346-863980 REVERSE LENGTH=271
Length = 271
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 14 QCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-GYVALPP 72
+CRIC DE N+E+PC+C G+LKYAHRKCVQRWCN KG+ CEIC Q + GY A PP
Sbjct: 42 ECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGYTA-PP 100
Query: 73 APL------FHFGGSPINFGETTRMDLHNHQFIAMFTTNHEFTDPDF-EYSAPSTRSLIC 125
PL GG G +D+H+ + +A+ + + ++ EY+A S
Sbjct: 101 PPLQPEETTIDIGGGWTISG----LDVHDPRLLAIAEAERRYLESEYVEYTASSASGAAF 156
Query: 126 YRXXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAIISIQ 185
R RH L I G E ++ +L++LR G L+P YIM AI +Q
Sbjct: 157 CRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISILQ 216
Query: 186 R 186
R
Sbjct: 217 R 217
>AT2G02960.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862346-863980 REVERSE LENGTH=271
Length = 271
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 14 QCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-GYVALPP 72
+CRIC DE N+E+PC+C G+LKYAHRKCVQRWCN KG+ CEIC Q + GY A PP
Sbjct: 42 ECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGYTA-PP 100
Query: 73 APL------FHFGGSPINFGETTRMDLHNHQFIAMFTTNHEFTDPDF-EYSAPSTRSLIC 125
PL GG G +D+H+ + +A+ + + ++ EY+A S
Sbjct: 101 PPLQPEETTIDIGGGWTISG----LDVHDPRLLAIAEAERRYLESEYVEYTASSASGAAF 156
Query: 126 YRXXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAIISIQ 185
R RH L I G E ++ +L++LR G L+P YIM AI +Q
Sbjct: 157 CRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISILQ 216
Query: 186 R 186
R
Sbjct: 217 R 217
>AT2G02960.4 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862346-863980 REVERSE LENGTH=271
Length = 271
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 14 QCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-GYVALPP 72
+CRIC DE N+E+PC+C G+LKYAHRKCVQRWCN KG+ CEIC Q + GY A PP
Sbjct: 42 ECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGYTA-PP 100
Query: 73 APL------FHFGGSPINFGETTRMDLHNHQFIAMFTTNHEFTDPDF-EYSAPSTRSLIC 125
PL GG G +D+H+ + +A+ + + ++ EY+A S
Sbjct: 101 PPLQPEETTIDIGGGWTISG----LDVHDPRLLAIAEAERRYLESEYVEYTASSASGAAF 156
Query: 126 YRXXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAIISIQ 185
R RH L I G E ++ +L++LR G L+P YIM AI +Q
Sbjct: 157 CRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISILQ 216
Query: 186 R 186
R
Sbjct: 217 R 217
>AT2G02960.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862346-863980 REVERSE LENGTH=271
Length = 271
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 14 QCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-GYVALPP 72
+CRIC DE N+E+PC+C G+LKYAHRKCVQRWCN KG+ CEIC Q + GY A PP
Sbjct: 42 ECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGYTA-PP 100
Query: 73 APL------FHFGGSPINFGETTRMDLHNHQFIAMFTTNHEFTDPDF-EYSAPSTRSLIC 125
PL GG G +D+H+ + +A+ + + ++ EY+A S
Sbjct: 101 PPLQPEETTIDIGGGWTISG----LDVHDPRLLAIAEAERRYLESEYVEYTASSASGAAF 156
Query: 126 YRXXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAIISIQ 185
R RH L I G E ++ +L++LR G L+P YIM AI +Q
Sbjct: 157 CRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISILQ 216
Query: 186 R 186
R
Sbjct: 217 R 217
>AT5G62460.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:25075545-25077072 FORWARD LENGTH=307
Length = 307
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 13 VQCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-GY---- 67
V+CRIC +ED N+E+PCSC G+LKYAHRKCVQRWCN KGD TCEIC + + GY
Sbjct: 76 VECRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEICHKSYQPGYTAPP 135
Query: 68 VALPPAPLFHFGGSPINFGETTRMDLHNHQFIAMFTTNHEFTDPDFEYSAPSTRS--LIC 125
+ G ++G +DL++ + +AM F D D++ A S S C
Sbjct: 136 PPPADDTIIDIGE---DWGNGVHLDLNDPRILAMAAAERHFFDADYDEYADSNSSGAAFC 192
Query: 126 YRXXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAIISIQ 185
E L +LR G L+P YIM AI +Q
Sbjct: 193 RSAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLPCYIMAWAISILQ 252
Query: 186 R 186
R
Sbjct: 253 R 253
>AT1G02610.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:553181-555854 REVERSE LENGTH=221
Length = 221
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 18/188 (9%)
Query: 5 IKSSPNTLVQCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQL 64
+KSS N +CRICH+E+ +S E PCSC GT+K+AHR C+QRWC+ KG+ CEIC Q+
Sbjct: 13 LKSSFN---RCRICHEEEAESYFEAPCSCSGTIKFAHRDCIQRWCDEKGNTICEICLQEY 69
Query: 65 K-GYVALPPAPLFHFGGSPINFGETTRMDLH----NHQFIAMFTTNHEFTDPDF-EYSAP 118
K GY F I T R +LH + + DF E ++
Sbjct: 70 KPGYTTTSKPSRF------IETAVTIRDNLHIMRRENGRRRRNRRLVNREESDFQECNSG 123
Query: 119 STRSLICYRXXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMV 178
R C R +H ++ G E Y T+ T++ L+ IG+L+P+ +++
Sbjct: 124 VDRGASCCRYLALIFSVILLIKHAFDAVY---GTEEYPYTIFTVLTLKAIGILLPMLVII 180
Query: 179 KAIISIQR 186
+ I +IQR
Sbjct: 181 RTITAIQR 188
>AT1G14260.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:4873200-4874430 FORWARD LENGTH=265
Length = 265
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 7/179 (3%)
Query: 13 VQCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-GYVALP 71
+CRIC DE + N+E+PC+C G+LKYAHRKCVQRWCN KG+ CEIC Q + GY +
Sbjct: 55 AECRICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQAGYTSP- 113
Query: 72 PAPLFHFGGSPINFGETTR---MDLHNHQFIAMFTTNHEFTDPDF-EYSAPSTRSLICYR 127
P + I+ G R +DL + + +A+ + + ++ +Y+A T +R
Sbjct: 114 -PPPPQSEETTIDIGGGWRISGLDLDDPRLLAIAEAERQILESEYDDYTASDTSGAAFFR 172
Query: 128 XXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAIISIQR 186
RH L I + ++ +L +LR L+P YIM AI + R
Sbjct: 173 SAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASAISILHR 231
>AT1G14260.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:4873200-4874430 FORWARD LENGTH=265
Length = 265
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 7/179 (3%)
Query: 13 VQCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-GYVALP 71
+CRIC DE + N+E+PC+C G+LKYAHRKCVQRWCN KG+ CEIC Q + GY +
Sbjct: 55 AECRICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQAGYTSP- 113
Query: 72 PAPLFHFGGSPINFGETTR---MDLHNHQFIAMFTTNHEFTDPDF-EYSAPSTRSLICYR 127
P + I+ G R +DL + + +A+ + + ++ +Y+A T +R
Sbjct: 114 -PPPPQSEETTIDIGGGWRISGLDLDDPRLLAIAEAERQILESEYDDYTASDTSGAAFFR 172
Query: 128 XXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAIISIQR 186
RH L I + ++ +L +LR L+P YIM AI + R
Sbjct: 173 SAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASAISILHR 231
>AT3G47550.6 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17525278 FORWARD LENGTH=288
Length = 288
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 13 VQCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-GYVALP 71
V+CRIC +ED N+E PC+C G+LKYAHRKCVQRWCN KGD TCEIC Q + GY A P
Sbjct: 67 VECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQHGYTAPP 126
Query: 72 PA----PLFHFGGSPINFGETTRMDLHNHQFIAMFTTNHEFTDPDFEYSAPSTRSLICYR 127
P + H G ++ +DL + + +AM F + D++ + + S +
Sbjct: 127 PPPPDETIIHIGD---DWENGVPLDLTDPRILAMAAAERHFLEADYDEYSENNSSGAAFC 183
Query: 128 XXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAIISIQRL 187
+ E +L +LR G L+P YIM AI +QR
Sbjct: 184 RSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAIGILQRR 243
Query: 188 QFVHE 192
+ E
Sbjct: 244 RQRQE 248
>AT3G47550.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17525278 FORWARD LENGTH=288
Length = 288
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 13 VQCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-GYVALP 71
V+CRIC +ED N+E PC+C G+LKYAHRKCVQRWCN KGD TCEIC Q + GY A P
Sbjct: 67 VECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQHGYTAPP 126
Query: 72 PA----PLFHFGGSPINFGETTRMDLHNHQFIAMFTTNHEFTDPDFEYSAPSTRSLICYR 127
P + H G ++ +DL + + +AM F + D++ + + S +
Sbjct: 127 PPPPDETIIHIGD---DWENGVPLDLTDPRILAMAAAERHFLEADYDEYSENNSSGAAFC 183
Query: 128 XXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAIISIQRL 187
+ E +L +LR G L+P YIM AI +QR
Sbjct: 184 RSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAIGILQRR 243
Query: 188 QFVHE 192
+ E
Sbjct: 244 RQRQE 248
>AT3G47550.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17525168 FORWARD LENGTH=249
Length = 249
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 84/174 (48%), Gaps = 8/174 (4%)
Query: 13 VQCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-GYVA-- 69
V+CRIC +ED N+E PC+C G+LKYAHRKCVQRWCN KGD TCEIC Q + GY A
Sbjct: 67 VECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQHGYTAPP 126
Query: 70 --LPPAPLFHFGGSPINFGETTRMDLHNHQFIAMFTTNHEFTDPDFEYSAPSTRSLICYR 127
P + H G ++ +DL + + +AM F + D++ + + S +
Sbjct: 127 PPPPDETIIHIGD---DWENGVPLDLTDPRILAMAAAERHFLEADYDEYSENNSSGAAFC 183
Query: 128 XXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAI 181
+ E +L +LR G L+P YIM AI
Sbjct: 184 RSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAI 237
>AT2G02960.5 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862440-863980 REVERSE LENGTH=275
Length = 275
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 14 QCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-GYVALPP 72
+CRIC DE N+E+PC+C G+LKYAHRKCVQRWCN KG+ CEIC Q + GY A PP
Sbjct: 42 ECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGYTA-PP 100
Query: 73 APL------FHFGGSPINFGETTRMDLHNHQFIAMFTTNHEFTDPDF-EYSAPSTRSLIC 125
PL GG G +D+H+ + +A+ + + ++ EY+A S
Sbjct: 101 PPLQPEETTIDIGGGWTISG----LDVHDPRLLAIAEAERRYLESEYVEYTASSASGAAF 156
Query: 126 YRXXXXXXXXXXXXRHTLPI 145
R RH L I
Sbjct: 157 CRSAALILMALLLLRHALTI 176
>AT3G47550.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17524942 FORWARD LENGTH=232
Length = 232
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 13 VQCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-GYVA-- 69
V+CRIC +ED N+E PC+C G+LKYAHRKCVQRWCN KGD TCEIC Q + GY A
Sbjct: 67 VECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQHGYTAPP 126
Query: 70 --LPPAPLFHFGGSPINFGETTRMDLHNHQFIAMFTTNHEFTDPDF-EYS 116
P + H G ++ +DL + + +AM F + D+ EYS
Sbjct: 127 PPPPDETIIHIGD---DWENGVPLDLTDPRILAMAAAERHFLEADYDEYS 173
>AT4G02075.1 | Symbols: PIT1 | RING/FYVE/PHD zinc finger superfamily
protein | chr4:913555-916414 REVERSE LENGTH=218
Length = 218
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 98/181 (54%), Gaps = 14/181 (7%)
Query: 8 SPNTLVQCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK-G 66
S + +CRICH+E+E+S E PC+C GT+K+AHR C+QRWCN KG+ TCEIC Q K G
Sbjct: 13 SKVRITRCRICHEEEEESFFEVPCACSGTVKFAHRNCIQRWCNEKGNTTCEICLQVYKDG 72
Query: 67 YVA-LPPAPLFHFGGSPINFGETTRMDLHNHQFIAMFTTNHEFTDPDFEYSAPSTRSLIC 125
Y A L + L + R + + +++ ++ + + A RSL
Sbjct: 73 YTAVLKQSKLIE---QEVTIRVNGRRRRRSRRLVSIAESDISQCNSVADRGASFCRSL-- 127
Query: 126 YRXXXXXXXXXXXXRHTLPIIFILSGAEGYSLTVSTLIVLRIIGMLVPVYIMVKAIISIQ 185
+HT +I+ G E Y +V T++ L+ IG+L+P++I+++ I +IQ
Sbjct: 128 ----TFTLSVFLLMKHTFDVIY---GTEEYPFSVFTVLTLKAIGILLPMFIIIRTISTIQ 180
Query: 186 R 186
+
Sbjct: 181 K 181
>AT4G32670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr4:15759527-15762847 REVERSE LENGTH=860
Length = 860
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 15 CRICHDEDE-DSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQ 62
CRIC +E D+ + PC+C G+LKY H C+ W N + N CEIC++
Sbjct: 33 CRICQSPEEPDNPLRHPCACRGSLKYIHSDCLFLWLNRRKRNHCEICKR 81
>AT2G45530.1 | Symbols: | RING/U-box superfamily protein |
chr2:18756604-18757326 FORWARD LENGTH=240
Length = 240
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%)
Query: 14 QCRICHDEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQ 61
QCR+C + E+ +E C C G L AHR C+ W KG N CEICQ
Sbjct: 73 QCRVCLQDKEEVLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQCEICQ 120
>AT4G34100.2 | Symbols: | RING/U-box superfamily protein |
chr4:16330590-16334864 FORWARD LENGTH=1107
Length = 1107
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 15 CRICHDE-DEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQ 62
CRIC + D D+ + PC+C G++K+ H+ C+ +W N CE+C+
Sbjct: 68 CRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKH 116
>AT4G34100.1 | Symbols: | RING/U-box superfamily protein |
chr4:16330590-16334864 FORWARD LENGTH=1108
Length = 1108
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 15 CRICHDE-DEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQ 62
CRIC + D D+ + PC+C G++K+ H+ C+ +W N CE+C+
Sbjct: 68 CRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKH 116
>AT5G60580.4 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=494
Length = 494
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 15 CRICHDE--DEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK 65
CRIC E + ++ CSC G L AH+ C +W KG+ TCE+C+Q++K
Sbjct: 257 CRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVK 309
>AT5G60580.2 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=494
Length = 494
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 15 CRICHDE--DEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK 65
CRIC E + ++ CSC G L AH+ C +W KG+ TCE+C+Q++K
Sbjct: 257 CRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVK 309
>AT5G60580.3 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=487
Length = 487
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 15 CRICHDE--DEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK 65
CRIC E + ++ CSC G L AH+ C +W KG+ TCE+C+Q++K
Sbjct: 257 CRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVK 309
>AT5G60580.1 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=487
Length = 487
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 15 CRICHDE--DEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK 65
CRIC E + ++ CSC G L AH+ C +W KG+ TCE+C+Q++K
Sbjct: 257 CRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVK 309
>AT3G06330.2 | Symbols: | RING/U-box superfamily protein |
chr3:1918512-1919709 FORWARD LENGTH=257
Length = 257
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 15 CRICHDEDEDSN-METPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLK 65
CRIC D E+ N ++ CSC G L+ H C +W + KG TC++C+Q ++
Sbjct: 49 CRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQ 100
>AT3G06330.1 | Symbols: | RING/U-box superfamily protein |
chr3:1917334-1919709 FORWARD LENGTH=426
Length = 426
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 15 CRICHDEDEDSN-METPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQ 62
CRIC D E+ N ++ CSC G L+ H C +W + KG TC++C+Q
Sbjct: 218 CRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQ 266
>AT2G37950.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:15882536-15883665 REVERSE LENGTH=207
Length = 207
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 15 CRICHDEDEDSN---METPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQ 61
CRICH E S +E CSC L AHR+C + W KGD TCEICQ
Sbjct: 84 CRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQ 133
>AT3G06330.3 | Symbols: | RING/U-box superfamily protein |
chr3:1917334-1919330 FORWARD LENGTH=363
Length = 363
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 15 CRICHDEDEDSN-METPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQ 62
CRIC D E+ N ++ CSC G L+ H C +W + KG TC++C+Q
Sbjct: 218 CRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQ 266
>AT5G18760.1 | Symbols: | RING/U-box superfamily protein |
chr5:6258508-6260828 REVERSE LENGTH=411
Length = 411
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 15 CRICHDEDEDSN-METPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQLKG 66
CRIC D E+ N ++ CSC G L+ H C +W + KG C++C+Q+++
Sbjct: 203 CRICLDVCEEGNTLKMECSCKGDLRLVHEHCAIKWFSTKGTRICDVCRQEVRN 255
>AT5G03180.1 | Symbols: | RING/U-box superfamily protein |
chr5:754201-756411 REVERSE LENGTH=462
Length = 462
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 2 DEKIKSSPNTLVQCRICH---DEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCE 58
D+ + P CRIC +EDE++ + C C G L AH+ C +W KG+ TC+
Sbjct: 234 DDGGEDVPEEEAVCRICMVEMEEDEEA-FKMECMCKGELALAHKTCTIKWFTIKGNITCD 292
Query: 59 ICQQQLK 65
+C+Q+++
Sbjct: 293 VCKQEVR 299
>AT5G03180.2 | Symbols: | RING/U-box superfamily protein |
chr5:754201-756411 REVERSE LENGTH=466
Length = 466
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 2 DEKIKSSPNTLVQCRICH---DEDEDSNMETPCSCCGTLKYAHRKCVQRWCNAKGDNTCE 58
D+ + P CRIC +EDE++ + C C G L AH+ C +W KG+ TC+
Sbjct: 238 DDGGEDVPEEEAVCRICMVEMEEDEEA-FKMECMCKGELALAHKTCTIKWFTIKGNITCD 296
Query: 59 ICQQQLK 65
+C+Q+++
Sbjct: 297 VCKQEVR 303
>AT3G09760.1 | Symbols: | RING/U-box superfamily protein |
chr3:2992975-2995451 REVERSE LENGTH=491
Length = 491
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 15/79 (18%)
Query: 15 CRICHDE-DEDSN-METPCSCCGTLKYAHRKCVQRWCNAKGDNTCEICQQQL-------- 64
CRIC E EDS + C C G L AH++C +W KG+ TC++C+Q++
Sbjct: 266 CRICLVELGEDSEAFKMECLCRGELALAHKECTIKWFTIKGNRTCDVCKQEVQNLPVTLL 325
Query: 65 -----KGYVALPPAPLFHF 78
+G + P A H+
Sbjct: 326 RMQNSRGSIGAPDAEAAHY 344