Miyakogusa Predicted Gene

Lj1g3v3116640.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3116640.2 tr|Q1WK58|Q1WK58_LOTJA CYC1 OS=Lotus japonicus
PE=2 SV=1,90.41,0,TCP,Transcription factor, TCP; seg,NULL;
TCP,Transcription factor TCP subgroup; R,CYC/TB1, R
domain,CUFF.30100.2
         (331 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67260.2 | Symbols: TCP1 | TCP family transcription factor  |...   104   7e-23
AT1G67260.1 | Symbols: TCP1 | TCP family transcription factor  |...   104   7e-23
AT1G68800.1 | Symbols: BRC2, TCP12 | TCP domain protein 12 | chr...    97   2e-20
AT3G18550.1 | Symbols: BRC1, TCP18, ATTCP18 | TCP family transcr...    79   4e-15
AT3G18550.2 | Symbols: BRC1, TCP18, ATTCP18 | TCP family transcr...    79   4e-15
AT1G30210.2 | Symbols: TCP24 | TEOSINTE BRANCHED 1, cycloidea, a...    75   5e-14
AT1G30210.1 | Symbols: TCP24, ATTCP24 | TEOSINTE BRANCHED 1, cyc...    75   5e-14
AT1G53230.1 | Symbols: TCP3 | TEOSINTE BRANCHED 1, cycloidea and...    74   1e-13
AT4G18390.2 | Symbols: TCP2 | TEOSINTE BRANCHED 1, cycloidea and...    74   1e-13
AT4G18390.1 | Symbols: TCP2 | TEOSINTE BRANCHED 1, cycloidea and...    74   1e-13
AT3G15030.3 | Symbols: TCP4 | TCP family transcription factor 4 ...    74   2e-13
AT3G15030.2 | Symbols: TCP4 | TCP family transcription factor 4 ...    74   2e-13
AT3G15030.1 | Symbols: TCP4, MEE35 | TCP family transcription fa...    74   2e-13
AT2G31070.1 | Symbols: TCP10 | TCP domain protein 10 | chr2:1322...    73   3e-13
AT3G02150.1 | Symbols: PTF1, TCP13, TFPD | plastid transcription...    68   9e-12
AT3G02150.2 | Symbols: PTF1, TFPD | plastid transcription factor...    68   1e-11
AT5G60970.1 | Symbols: TCP5 | TEOSINTE BRANCHED 1, cycloidea and...    64   1e-10
AT5G08070.1 | Symbols: TCP17 | TCP domain protein 17 | chr5:2584...    60   3e-09

>AT1G67260.2 | Symbols: TCP1 | TCP family transcription factor  |
           chr1:25168152-25169307 REVERSE LENGTH=351
          Length = 351

 Score =  104 bits (260), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEELFRS 174
           DRHSKI T+QG+RDRRVRLSI IAR+FFDLQDMLGFDKAS TL+WL  KS KAI+E+ ++
Sbjct: 89  DRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVVQA 148

Query: 175 KHSDNNN 181
           K+ +N++
Sbjct: 149 KNLNNDD 155


>AT1G67260.1 | Symbols: TCP1 | TCP family transcription factor  |
           chr1:25168228-25169307 REVERSE LENGTH=359
          Length = 359

 Score =  104 bits (260), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEELFRS 174
           DRHSKI T+QG+RDRRVRLSI IAR+FFDLQDMLGFDKAS TL+WL  KS KAI+E+ ++
Sbjct: 89  DRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVVQA 148

Query: 175 KHSDNNN 181
           K+ +N++
Sbjct: 149 KNLNNDD 155


>AT1G68800.1 | Symbols: BRC2, TCP12 | TCP domain protein 12 |
           chr1:25847306-25848471 REVERSE LENGTH=356
          Length = 356

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 52/57 (91%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSKI T+QG RDRR+RLS++IARKFFDLQDMLGFDKAS T+EWLFSKS  +I++L
Sbjct: 114 DRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQL 170


>AT3G18550.1 | Symbols: BRC1, TCP18, ATTCP18 | TCP family
           transcription factor  | chr3:6383769-6385604 FORWARD
           LENGTH=433
          Length = 433

 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 33/57 (57%), Positives = 47/57 (82%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSKI T++G RDRR+RLS+++A++ F LQDMLGFDKAS T+EWL +++   I ++
Sbjct: 150 DRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEIIKI 206


>AT3G18550.2 | Symbols: BRC1, TCP18, ATTCP18 | TCP family
           transcription factor  | chr3:6383769-6385604 FORWARD
           LENGTH=429
          Length = 429

 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 33/54 (61%), Positives = 45/54 (83%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAI 168
           DRHSKI T++G RDRR+RLS+++A++ F LQDMLGFDKAS T+EWL +++   I
Sbjct: 150 DRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEI 203


>AT1G30210.2 | Symbols: TCP24 | TEOSINTE BRANCHED 1, cycloidea, and
           PCF family 24 | chr1:10628754-10629728 REVERSE
           LENGTH=324
          Length = 324

 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 45/57 (78%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSK+ TS+GLRDRR+RLS+  A +F+DLQD LGFD+ S  +EWL + ++ +I +L
Sbjct: 52  DRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDL 108


>AT1G30210.1 | Symbols: TCP24, ATTCP24 | TEOSINTE BRANCHED 1,
           cycloidea, and PCF family 24 | chr1:10628754-10629728
           REVERSE LENGTH=324
          Length = 324

 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 45/57 (78%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSK+ TS+GLRDRR+RLS+  A +F+DLQD LGFD+ S  +EWL + ++ +I +L
Sbjct: 52  DRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDL 108


>AT1G53230.1 | Symbols: TCP3 | TEOSINTE BRANCHED 1, cycloidea and
           PCF transcription factor 3 | chr1:19850260-19851435
           REVERSE LENGTH=391
          Length = 391

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 44/57 (77%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSK+ T++G RDRRVRLS   A +F+D+QD LGFD+ S  ++WL +K+  AI++L
Sbjct: 51  DRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDL 107


>AT4G18390.2 | Symbols: TCP2 | TEOSINTE BRANCHED 1, cycloidea and
           PCF transcription factor 2 | chr4:10163212-10164309
           REVERSE LENGTH=365
          Length = 365

 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 42/57 (73%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSK+ TS+G RDRRVRLS+  A +F+DLQD LG+D+ S  +EWL   +  +I EL
Sbjct: 44  DRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIKAAEDSISEL 100


>AT4G18390.1 | Symbols: TCP2 | TEOSINTE BRANCHED 1, cycloidea and
           PCF transcription factor 2 | chr4:10163212-10164309
           REVERSE LENGTH=365
          Length = 365

 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 42/57 (73%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSK+ TS+G RDRRVRLS+  A +F+DLQD LG+D+ S  +EWL   +  +I EL
Sbjct: 44  DRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIKAAEDSISEL 100


>AT3G15030.3 | Symbols: TCP4 | TCP family transcription factor 4 |
           chr3:5062308-5063570 FORWARD LENGTH=420
          Length = 420

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 43/57 (75%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSK+ T++G RDRRVRLS   A +F+D+QD LGFD+ S  ++WL  K+  +I+EL
Sbjct: 47  DRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDEL 103


>AT3G15030.2 | Symbols: TCP4 | TCP family transcription factor 4 |
           chr3:5062308-5063570 FORWARD LENGTH=420
          Length = 420

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 43/57 (75%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSK+ T++G RDRRVRLS   A +F+D+QD LGFD+ S  ++WL  K+  +I+EL
Sbjct: 47  DRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDEL 103


>AT3G15030.1 | Symbols: TCP4, MEE35 | TCP family transcription
           factor 4 | chr3:5062308-5063570 FORWARD LENGTH=420
          Length = 420

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 43/57 (75%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSK+ T++G RDRRVRLS   A +F+D+QD LGFD+ S  ++WL  K+  +I+EL
Sbjct: 47  DRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDEL 103


>AT2G31070.1 | Symbols: TCP10 | TCP domain protein 10 |
           chr2:13220984-13222069 REVERSE LENGTH=361
          Length = 361

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 43/57 (75%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSK+ TS+G RDRRVRLS   A +F+D+QD LG+D+ S  ++WL  K+  AI++L
Sbjct: 31  DRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDKL 87


>AT3G02150.1 | Symbols: PTF1, TCP13, TFPD | plastid transcription
           factor 1 | chr3:391522-392450 FORWARD LENGTH=278
          Length = 278

 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 41/57 (71%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSK+ T +GLRDRRVRLS+  A + +DLQ+ LG D+ S  ++WL   + + I+EL
Sbjct: 76  DRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDEL 132


>AT3G02150.2 | Symbols: PTF1, TFPD | plastid transcription factor 1
           | chr3:391522-392589 FORWARD LENGTH=355
          Length = 355

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 41/57 (71%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSK+ T +GLRDRRVRLS+  A + +DLQ+ LG D+ S  ++WL   + + I+EL
Sbjct: 76  DRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDEL 132


>AT5G60970.1 | Symbols: TCP5 | TEOSINTE BRANCHED 1, cycloidea and
           PCF transcription factor 5 | chr5:24535570-24536652
           REVERSE LENGTH=360
          Length = 360

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 39/57 (68%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSK+ T +GLRDRR+RLS+  A + +DLQD LG  + S  ++WL   +   +++L
Sbjct: 65  DRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLEAAKDDVDKL 121


>AT5G08070.1 | Symbols: TCP17 | TCP domain protein 17 |
           chr5:2584885-2585613 FORWARD LENGTH=242
          Length = 242

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 38/57 (66%)

Query: 115 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFSKSNKAIEEL 171
           DRHSK+ T +GLRDRR+RLS+  A + +DLQ+ LG  + S  ++WL   +   ++ L
Sbjct: 35  DRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVIDWLLEVAKNDVDLL 91