Miyakogusa Predicted Gene
- Lj1g3v3022360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3022360.1 Non Chatacterized Hit- tr|B9RW35|B9RW35_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,32.22,4e-19,LEA_2,Late embryogenesis abundant protein, LEA-14;
FAMILY NOT NAMED,NULL; seg,NULL,CUFF.29987.1
(217 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G27080.2 | Symbols: | Late embryogenesis abundant (LEA) hydr... 177 7e-45
AT2G27080.1 | Symbols: | Late embryogenesis abundant (LEA) hydr... 177 7e-45
AT5G21130.1 | Symbols: | Late embryogenesis abundant (LEA) hydr... 135 3e-32
AT5G36970.1 | Symbols: NHL25 | NDR1/HIN1-like 25 | chr5:14604367... 107 7e-24
AT1G65690.1 | Symbols: | Late embryogenesis abundant (LEA) hydr... 103 6e-23
AT1G54540.1 | Symbols: | Late embryogenesis abundant (LEA) hydr... 100 5e-22
AT5G06320.1 | Symbols: NHL3 | NDR1/HIN1-like 3 | chr5:1931016-19... 63 1e-10
AT3G11650.1 | Symbols: NHL2 | NDR1/HIN1-like 2 | chr3:3676264-36... 62 4e-10
AT2G35980.1 | Symbols: YLS9, NHL10, ATNHL10 | Late embryogenesis... 61 6e-10
AT5G22870.1 | Symbols: | Late embryogenesis abundant (LEA) hydr... 58 6e-09
AT5G11890.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 3e-08
AT3G52470.1 | Symbols: | Late embryogenesis abundant (LEA) hydr... 55 5e-08
AT2G35960.1 | Symbols: NHL12 | NDR1/HIN1-like 12 | chr2:15107150... 54 5e-08
AT4G09590.1 | Symbols: NHL22 | NDR1/HIN1-like 22 | chr4:6066128-... 54 6e-08
AT5G22200.1 | Symbols: | Late embryogenesis abundant (LEA) hydr... 54 7e-08
AT3G44220.1 | Symbols: | Late embryogenesis abundant (LEA) hydr... 54 1e-07
AT2G35970.1 | Symbols: | Late embryogenesis abundant (LEA) hydr... 53 2e-07
AT5G53730.1 | Symbols: | Late embryogenesis abundant (LEA) hydr... 51 5e-07
AT2G35460.1 | Symbols: | Late embryogenesis abundant (LEA) hydr... 50 1e-06
AT1G17620.1 | Symbols: | Late embryogenesis abundant (LEA) hydr... 48 5e-06
>AT2G27080.2 | Symbols: | Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family |
chr2:11566383-11567165 FORWARD LENGTH=260
Length = 260
Score = 177 bits (448), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 113/172 (65%), Gaps = 5/172 (2%)
Query: 46 GVFYLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYYLK 105
V YL++RP+AP YSI+ SV G+NL F+V VR+ NGN KIG+YY K
Sbjct: 94 AVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISP-----SFNVTVRSRNGNGKIGVYYEK 148
Query: 106 GSSVEMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNAVAKRSVP 165
SSV+++Y D + G +P FYQ + NVTV K VL G ++L R + N V+K++VP
Sbjct: 149 ESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVP 208
Query: 166 LTMKLRAPVKIKVGSVKTWKITVKVDCDVAVDQLTAKSKIVHKDCSYGLDFW 217
+K++APVKIK GSVKTW + V VDCDV VD+LTA S+IV + CS+ +D W
Sbjct: 209 FKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDVDLW 260
>AT2G27080.1 | Symbols: | Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family |
chr2:11566383-11567165 FORWARD LENGTH=260
Length = 260
Score = 177 bits (448), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 113/172 (65%), Gaps = 5/172 (2%)
Query: 46 GVFYLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYYLK 105
V YL++RP+AP YSI+ SV G+NL F+V VR+ NGN KIG+YY K
Sbjct: 94 AVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISP-----SFNVTVRSRNGNGKIGVYYEK 148
Query: 106 GSSVEMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNAVAKRSVP 165
SSV+++Y D + G +P FYQ + NVTV K VL G ++L R + N V+K++VP
Sbjct: 149 ESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVP 208
Query: 166 LTMKLRAPVKIKVGSVKTWKITVKVDCDVAVDQLTAKSKIVHKDCSYGLDFW 217
+K++APVKIK GSVKTW + V VDCDV VD+LTA S+IV + CS+ +D W
Sbjct: 209 FKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDVDLW 260
>AT5G21130.1 | Symbols: | Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family |
chr5:7185968-7186813 FORWARD LENGTH=281
Length = 281
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 99/173 (57%), Gaps = 5/173 (2%)
Query: 44 AAGVFYLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYY 103
A G FYLV++P P +S+ VSV G+NLT + +R+ N K+G+ Y
Sbjct: 113 AFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPFSPV-----IRIKLRSQNVKGKLGLIY 167
Query: 104 LKGSSVEMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNAVAKRS 163
KG+ ++F+ ++L G AF Q + NVTV VLKG V+L S R L + K
Sbjct: 168 EKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKKGK 227
Query: 164 VPLTMKLRAPVKIKVGSVKTWKITVKVDCDVAVDQLTAKSKIVHKDCSYGLDF 216
VP ++++APVK KVGSV TW +T+ VDC + VD+LTA + + ++C GL
Sbjct: 228 VPFGLRIKAPVKFKVGSVTTWTMTITVDCKITVDKLTASATVKTENCETGLSL 280
>AT5G36970.1 | Symbols: NHL25 | NDR1/HIN1-like 25 |
chr5:14604367-14605194 REVERSE LENGTH=248
Length = 248
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 21/176 (11%)
Query: 46 GVFYLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYYLK 105
G+ YLVFRPK P+Y+I + LT F+V + A N N+KIGIYY
Sbjct: 81 GILYLVFRPKFPDYNIDR-----LQLTRFQLNQDLSLSTAFNVTITAKNPNEKIGIYYED 135
Query: 106 GSSVEMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGVELAG--SDRTALVNAVAKR- 162
GS + + Y +R+ G+LP FYQ N T+ VE+ G + T+L+ + ++
Sbjct: 136 GSKISVLYMQTRISNGSLPKFYQGHENTTIIL-------VEMTGFTQNATSLMTTLQEQQ 188
Query: 163 ----SVPLTMKLRAPVKIKVGSVKTWKITVKVDCDVAVDQLTAKS--KIVHKDCSY 212
S+PL +++ PV+IK+G +K K+ V C V+VD L A S ++ +C Y
Sbjct: 189 RLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSVDSLAANSVIRVRSSNCKY 244
>AT1G65690.1 | Symbols: | Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family |
chr1:24431642-24432898 REVERSE LENGTH=252
Length = 252
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
Query: 44 AAGVFYLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYY 103
+ G+ YLVF+PK P+YSI + LT F+V + A N N+KIGIYY
Sbjct: 83 SIGILYLVFKPKLPDYSIDR-----LQLTRFALNQDSSLTTAFNVTITAKNPNEKIGIYY 137
Query: 104 LKGSSVEMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNAVAKRS 163
GS + ++Y + +L G+LP FYQ N TV + G +G T +
Sbjct: 138 EDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQNASGLRTTLEEQQQRTGN 197
Query: 164 VPLTMKLRAPVKIKVGSVKTWKITVKVDCDVAVDQLTAKS--KIVHKDCSYGL 214
+PL +++ PV++K G +K +++ V C V VD L + KI C + L
Sbjct: 198 IPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNVIKIQSSSCKFRL 250
>AT1G54540.1 | Symbols: | Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family |
chr1:20367702-20368421 REVERSE LENGTH=239
Length = 239
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 28 CWXXXXXXXXXXXXXXAAGVFYLVFRPKAPNYSIQTVSVK--GMNLTXXXXXXXXXXXXE 85
CW A V Y VF PK P+Y + ++ V G+NL E
Sbjct: 55 CWVLSLLVIALIALAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLSLSA-------E 107
Query: 86 FDVAVRANNGNDKIGIYYLKGSSVEMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGV 145
F V + A N N+KIGIYY KG + ++Y ++LC G +P FYQ NVT L G
Sbjct: 108 FKVEITARNPNEKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALTGRA- 166
Query: 146 ELAGSDRTALVNAVAKRSVPLTMKLRAPVKIKVGSVKTWKITVKVDCDVAVDQLTAKSKI 205
+ + AL VPL +K+ APV IK+G++K KI + C + VD L+ + I
Sbjct: 167 QYGNTVLAALQQQQQTGRVPLDLKVNAPVAIKLGNLKMKKIRILGSCKLVVDSLSTNNNI 226
Query: 206 VHK--DCSY 212
K DCS+
Sbjct: 227 NIKASDCSF 235
>AT5G06320.1 | Symbols: NHL3 | NDR1/HIN1-like 3 |
chr5:1931016-1931711 REVERSE LENGTH=231
Length = 231
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 9/162 (5%)
Query: 44 AAGVFYLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYY 103
AA + +L+FRP A + V LT D+ N N +IG+YY
Sbjct: 62 AALIIWLIFRPNAIKFH-----VTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYY 116
Query: 104 LKGSSVEMFYRDSRL-CGGALPAFYQASNNVTVFKAVLKGDG-VELAGSDRTALVNAVAK 161
V +Y D R + FYQ N TV L G V L G +R L V
Sbjct: 117 -DEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNS 175
Query: 162 RSVPLTMKLRAPVKIKVGSVKTWKITVKVDCDVAVDQLTAKS 203
+ + KLR ++ K G +K+W+ K+ CD+ V LT+ S
Sbjct: 176 QIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKV-PLTSNS 216
>AT3G11650.1 | Symbols: NHL2 | NDR1/HIN1-like 2 |
chr3:3676264-3676986 REVERSE LENGTH=240
Length = 240
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
Query: 44 AAGVFYLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYY 103
AA + +L+FRP A + + NL D+ N N ++G+YY
Sbjct: 69 AALILWLIFRPNAVKFYVADA-----NLNRFSFDPNNNLHYSLDLNFTIRNPNQRVGVYY 123
Query: 104 LKGSSVEMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGVELAGSD-RTALVNAVAKR 162
+ SV +Y D R + +FYQ N TV ++G + + G RT L +
Sbjct: 124 DE-FSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKSG 182
Query: 163 SVPLTMKLRAPVKIKVGSVKTWKITVKVDCD 193
+ KLR V+ K +K+WK+ K+ CD
Sbjct: 183 IYRINAKLRLSVRFKFWFIKSWKLKPKIKCD 213
>AT2G35980.1 | Symbols: YLS9, NHL10, ATNHL10 | Late embryogenesis
abundant (LEA) hydroxyproline-rich glycoprotein family |
chr2:15110635-15111318 FORWARD LENGTH=227
Length = 227
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Query: 44 AAGVFYLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYY 103
AA +F+L+ RP+A + + S+ + T + V N N +IG+YY
Sbjct: 55 AALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRY----NLALTVPVRNPNKRIGLYY 110
Query: 104 LKGSSVEMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNAVAKRS 163
+ + +Y R L FYQ N TV +G + + + ++ +NA
Sbjct: 111 DRIEA-HAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISG 169
Query: 164 V-PLTMKLRAPVKIKVGSVKTWKITVKVDCD 193
V + +K R V+ K+G +K +I KVDCD
Sbjct: 170 VYNIEIKFRLRVRFKLGDLKFRRIKPKVDCD 200
>AT5G22870.1 | Symbols: | Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family |
chr5:7647056-7647679 REVERSE LENGTH=207
Length = 207
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 47 VFYLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYYLKG 106
+ +L +PK Y+++ SV+ NLT F ++++N N +I +YY
Sbjct: 46 ITWLETKPKKLRYTVENASVQNFNLTNDNHMSAT-----FQFTIQSHNPNHRISVYY--- 97
Query: 107 SSVEMF--YRDSRLCGGALPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNAVAKRSV 164
SSVE+F ++D L + F+Q NV L + V ++ S+ L + + +
Sbjct: 98 SSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAVSKSNGKDLRSQNSLGKI 157
Query: 165 PLTMKLRAPVKIKVGSVKTWKITVKVDCDVAVDQLTAKSKIVHKDC 210
+ ++A V+ KVG K+ T K+ C L+ +K + C
Sbjct: 158 GFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQNSSC 203
>AT5G11890.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant
structures; EXPRESSED DURING: 6 growth stages; BEST
Arabidopsis thaliana protein match is: Late
embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family (TAIR:AT1G17620.1); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink). | chr5:3831770-3832633 FORWARD LENGTH=287
Length = 287
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 44 AAGVFYLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYY 103
AA Y+++ P+ P++S+ ++ + +NLT F+ + + N N + Y
Sbjct: 100 AATAMYVIYHPRPPSFSVPSIRISRVNLTTSSDSSVSHLSSFFNFTLISENPNQHLSFSY 159
Query: 104 LKGS-SVEMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGV--ELAGSDRTALVNAVA 160
+ +V + L G +PAF+ + N T F V+ EL + L + +
Sbjct: 160 DPFTVTVNSAKSGTMLGNGTVPAFFSDNGNKTSFHGVIATSTAARELDPDEAKHLRSDLT 219
Query: 161 KRSVPLTMKLRAPVKIKVGSVKTWKITVKVDCD 193
+ V +++R VK+ +G +K+ + +KV C+
Sbjct: 220 RARVGYEIEMRTKVKMIMGKLKSEGVEIKVTCE 252
>AT3G52470.1 | Symbols: | Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family |
chr3:19450750-19451376 FORWARD LENGTH=208
Length = 208
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 5/149 (3%)
Query: 49 YLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYYLKGSS 108
+++ RP P + +Q +V NL+ F V + + N N KIGIYY +
Sbjct: 38 WVILRPTKPRFVLQDATVYAFNLSQPNLLTS-----NFQVTIASRNPNSKIGIYYDRLHV 92
Query: 109 VEMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNAVAKRSVPLTM 168
+ A+P YQ V V+ + G V +A + AL + V L +
Sbjct: 93 YATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNSVALGEEKDRGFVGLMI 152
Query: 169 KLRAPVKIKVGSVKTWKITVKVDCDVAVD 197
+ V+ KV ++ T K + V C ++
Sbjct: 153 RADGTVRWKVRTLITGKYHIHVRCQAFIN 181
>AT2G35960.1 | Symbols: NHL12 | NDR1/HIN1-like 12 |
chr2:15107150-15107782 FORWARD LENGTH=210
Length = 210
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Query: 49 YLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYYLKGSS 108
+++ +P P + +Q +V NL+ F + + + N N +IGIYY +
Sbjct: 40 WIILQPTKPRFILQDATVYAFNLSQPNLLTS-----NFQITIASRNRNSRIGIYYDR-LH 93
Query: 109 VEMFYRDSRLC-GGALPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNAVAKRSVPLT 167
V YR+ ++ A+P YQ V+ + G+ V +A + AL + + V L
Sbjct: 94 VYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLI 153
Query: 168 MKLRAPVKIKVGSVKTWKITVKVDCDVAVDQLTAKSKIVH 207
++ V+ KVG++ T K + V C ++ L K+ VH
Sbjct: 154 IRADGRVRWKVGTLITGKYHLHVRCQAFIN-LADKAAGVH 192
>AT4G09590.1 | Symbols: NHL22 | NDR1/HIN1-like 22 |
chr4:6066128-6066763 FORWARD LENGTH=211
Length = 211
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 49 YLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYYLKGSS 108
+++ +PK P + +Q +V NL+ +F + + + N N IGIYY +
Sbjct: 41 WIILQPKNPEFILQDTTVYAFNLSQPNLLTS-----KFQITIASRNRNSNIGIYYDHLHA 95
Query: 109 VEMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNAVAKRSVPLTM 168
+ LP YQ +V+ +L G+ V +A + AL + LT+
Sbjct: 96 YASYRNQQITLASDLPPTYQRHKEDSVWSPLLYGNQVPIAPFNAVALGDEQNSGVFTLTI 155
Query: 169 KLRAPVKIKVGSVKTWKITVKVDCDVAVDQ 198
+ V+ KVG++ + V C ++Q
Sbjct: 156 CVDGQVRWKVGTLTIGNYHLHVRCQAFINQ 185
>AT5G22200.1 | Symbols: | Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family |
chr5:7355688-7356871 FORWARD LENGTH=210
Length = 210
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 49 YLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYYLKGSS 108
+ + P P + +Q V++ N++ V V + N NDKIGI+Y +
Sbjct: 43 WAILHPHGPRFVLQDVTINDFNVSQPNFLSS-----NLQVTVSSRNPNDKIGIFYDR-LD 96
Query: 109 VEMFYRDSRLC-GGALPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNAVAKRSVPLT 167
+ + YR+ + LP+ YQ VTV+ L G V +A +AL + V L
Sbjct: 97 IYVTYRNQEVTLARLLPSTYQGHLEVTVWSPFLIGSAVPVAPYLSSALNEDLFAGLVLLN 156
Query: 168 MKLRAPVKIKVGSVKTWKITVKVDC 192
+K+ V+ KVGS + + V+C
Sbjct: 157 IKIDGWVRWKVGSWVSGSYRLHVNC 181
>AT3G44220.1 | Symbols: | Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family |
chr3:15928216-15929645 FORWARD LENGTH=206
Length = 206
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 11/154 (7%)
Query: 45 AGVFYLVF------RPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDK 98
A V ++VF P P + +Q ++ N++ V + + N NDK
Sbjct: 29 AAVLFVVFLVWAILHPHGPRFVLQDATIYAFNVSQPNYLTS-----NLQVTLSSRNPNDK 83
Query: 99 IGIYYLKGSSVEMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNA 158
IGI+Y + + LPA YQ +VT++ L G V +A AL
Sbjct: 84 IGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIWSPFLYGTTVPVAPYFSPALSQD 143
Query: 159 VAKRSVPLTMKLRAPVKIKVGSVKTWKITVKVDC 192
+ V L +K+ V+ KVG+ + + + V+C
Sbjct: 144 LTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNC 177
>AT2G35970.1 | Symbols: | Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family |
chr2:15109007-15109642 FORWARD LENGTH=211
Length = 211
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 5/149 (3%)
Query: 50 LVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYYLKGSSV 109
++ +PK P + +Q +V NL+ +F + + + N N IGIYY +
Sbjct: 42 IILQPKKPEFILQDTTVYAFNLSQPNLLTS-----KFQITIASRNRNSNIGIYYDHLHAY 96
Query: 110 EMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNAVAKRSVPLTMK 169
+ LP YQ +V+ +L G+ V +A + AL + LT+
Sbjct: 97 ASYRNQQITLASDLPPTYQRHKENSVWSPLLYGNQVPIAPFNAVALGDEQNSGVFTLTIC 156
Query: 170 LRAPVKIKVGSVKTWKITVKVDCDVAVDQ 198
+ V+ KVG++ + V C ++Q
Sbjct: 157 VDGRVRWKVGTLTIGNYHLHVRCQAFINQ 185
>AT5G53730.1 | Symbols: | Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family |
chr5:21808072-21808713 REVERSE LENGTH=213
Length = 213
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 49 YLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYYLKGSS 108
+L+ P+ P +S+ + +NLT + + + N N K+GIYY K
Sbjct: 46 WLILHPERPEFSLTEADIYSLNLTTSSTHLLNS---SVQLTLFSKNPNKKVGIYYDK-LL 101
Query: 109 VEMFYRDSRLCGGA-LPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNAVAKRSVPLT 167
V YR ++ A LP FYQ+ + + A L+G + +A S + + + +
Sbjct: 102 VYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIG 161
Query: 168 MKLRAPVKIKVGSVKTWKITVKVDC 192
MK+ ++ K+G+ + V+C
Sbjct: 162 MKMDGKLRWKIGTWVSGAYRFNVNC 186
>AT2G35460.1 | Symbols: | Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family |
chr2:14905788-14906504 FORWARD LENGTH=238
Length = 238
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 6/160 (3%)
Query: 45 AGVFYLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYYL 104
A + + + RP + + + F + N N ++GI+Y
Sbjct: 69 ALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSI----RNPNQRLGIHYD 124
Query: 105 KGSSVEMFYRDSRLCGGALPAFYQASNNVTVFKAVLKGDGVELAGSDRTALVNAVAKRSV 164
+ V +Y D R + +FYQ N TV L G + L G+ + V
Sbjct: 125 Q-LEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGRRDFREDRRSGV 183
Query: 165 -PLTMKLRAPVKIKVGSVKTWKITVKVDCDVAVDQLTAKS 203
+ +KLR ++ K G + +W + K+ C + V T+ S
Sbjct: 184 YRIDVKLRFKLRFKFGFLNSWAVRPKIKCHLKVPLSTSSS 223
>AT1G17620.1 | Symbols: | Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family |
chr1:6062313-6063107 FORWARD LENGTH=264
Length = 264
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Query: 47 VFYLVFRPKAPNYSIQTVSVKGMNLTXXXXXXXXXXXXEFDVAVRANNGNDKIGIYYLKG 106
V YL++RP+ P++++ + + +N T ++V A N N +G Y
Sbjct: 82 VVYLIYRPQRPSFTVSELKISTLNFTSAVRLTTA-----ISLSVIARNPNKNVGFIY-DV 135
Query: 107 SSVEMFYR------DSRLCGGALPAFYQASNNVTVFKAVLKGDGVEL----AGSDRTALV 156
+ + ++ D + G + AF N T ++ + EL AG + L
Sbjct: 136 TDITLYKASTGGDDDVVIGKGTIAAFSHGKKNTTTLRSTIGSPPDELDEISAGKLKGDL- 194
Query: 157 NAVAKRSVPLTMKLRAPVKIKVGSVKTWKITVKVDCD 193
AK++V + + L + VK+K+G++KT K ++V C+
Sbjct: 195 --KAKKAVAIKIVLNSKVKVKMGALKTPKSGIRVTCE 229