Miyakogusa Predicted Gene
- Lj1g3v3022320.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3022320.1 Non Chatacterized Hit- tr|I1N4J8|I1N4J8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20382 PE,81.42,0,RRM,RNA
recognition motif domain; no description,Nucleotide-binding,
alpha-beta plait; RNA recogniti,CUFF.29891.1
(113 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G61030.1 | Symbols: GR-RBP3 | glycine-rich RNA-binding protei... 151 7e-38
AT1G74230.1 | Symbols: GR-RBP5 | glycine-rich RNA-binding protei... 137 1e-33
AT4G13850.3 | Symbols: ATGRP2 | glycine-rich RNA-binding protein... 112 4e-26
AT4G13850.2 | Symbols: ATGRP2 | glycine-rich RNA-binding protein... 112 4e-26
AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | glycine-rich RNA-... 112 4e-26
AT4G13850.4 | Symbols: ATGRP2 | glycine-rich RNA-binding protein... 112 5e-26
AT3G23830.2 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding ... 109 3e-25
AT3G23830.1 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding ... 109 3e-25
AT5G47320.1 | Symbols: RPS19 | ribosomal protein S19 | chr5:1920... 89 7e-19
AT2G37220.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 89 8e-19
AT5G06210.1 | Symbols: | RNA binding (RRM/RBD/RNP motifs) famil... 86 3e-18
AT2G21660.2 | Symbols: ATGRP7, CCR2 | cold, circadian rhythm, an... 84 2e-17
AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | cold, circa... 84 2e-17
AT1G18630.1 | Symbols: GR-RBP6 | glycine-rich RNA-binding protei... 83 3e-17
AT3G08000.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 83 5e-17
AT4G13860.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 80 3e-16
AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | 31-kDa RN... 79 4e-16
AT3G53460.4 | Symbols: CP29 | chloroplast RNA-binding protein 29... 79 8e-16
AT3G53460.3 | Symbols: CP29 | chloroplast RNA-binding protein 29... 79 9e-16
AT3G53460.2 | Symbols: CP29 | chloroplast RNA-binding protein 29... 79 9e-16
AT3G53460.1 | Symbols: CP29 | chloroplast RNA-binding protein 29... 79 9e-16
AT4G39260.2 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa... 77 2e-15
AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa... 77 2e-15
AT4G39260.3 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa... 77 3e-15
AT3G26420.1 | Symbols: ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs... 75 8e-15
AT1G60000.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 74 2e-14
AT2G37510.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 74 2e-14
AT3G46020.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 74 3e-14
AT5G50250.1 | Symbols: CP31B | chloroplast RNA-binding protein 3... 72 6e-14
AT3G20930.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 71 2e-13
AT5G54580.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 70 2e-13
AT2G27330.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 68 1e-12
AT4G39260.4 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa... 66 4e-12
AT1G76460.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 65 9e-12
AT2G46780.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 65 9e-12
AT1G73530.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 65 1e-11
AT1G33470.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 64 3e-11
AT1G33470.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 64 3e-11
AT1G49760.2 | Symbols: PAB8 | poly(A) binding protein 8 | chr1:1... 63 3e-11
AT1G49760.1 | Symbols: PAB8, PABP8 | poly(A) binding protein 8 |... 63 3e-11
AT5G04280.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 63 4e-11
AT1G60650.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 63 4e-11
AT1G60650.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 63 4e-11
AT3G07810.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 63 4e-11
AT3G07810.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 63 5e-11
AT5G55550.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 63 5e-11
AT5G55550.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 63 5e-11
AT1G22910.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 62 7e-11
AT5G55550.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 62 7e-11
AT5G55550.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 62 7e-11
AT1G22910.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 62 9e-11
AT1G22910.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 62 9e-11
AT5G40490.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 62 9e-11
AT4G26650.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 62 1e-10
AT5G47620.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 62 1e-10
AT3G14100.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 62 1e-10
AT1G20880.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 62 1e-10
AT1G20880.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 62 1e-10
AT1G13690.1 | Symbols: ATE1 | ATPase E1 | chr1:4693380-4694179 F... 61 1e-10
AT5G47620.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 61 1e-10
AT5G47620.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 61 1e-10
AT3G13224.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 61 1e-10
AT1G78260.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 61 1e-10
AT1G78260.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 61 2e-10
AT4G26650.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 61 2e-10
AT3G52380.1 | Symbols: CP33, PDE322 | chloroplast RNA-binding pr... 60 2e-10
AT3G13224.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 60 3e-10
AT3G52150.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 60 3e-10
AT3G52150.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 60 3e-10
AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein 1A... 60 3e-10
AT5G19030.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 60 4e-10
AT5G59860.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 59 5e-10
AT5G08695.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 59 6e-10
AT5G11412.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 59 8e-10
AT1G22330.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 59 9e-10
AT5G53680.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 59 9e-10
AT2G21690.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 59 9e-10
AT4G14300.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 59 1e-09
AT3G54770.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 59 1e-09
AT4G34110.1 | Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding pro... 59 1e-09
AT4G20030.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 58 1e-09
AT1G17370.1 | Symbols: UBP1B | oligouridylate binding protein 1B... 58 1e-09
AT2G22100.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 58 1e-09
AT1G17370.2 | Symbols: UBP1B | oligouridylate binding protein 1B... 58 1e-09
AT5G51300.3 | Symbols: | splicing factor-related | chr5:2084988... 57 2e-09
AT5G51300.2 | Symbols: | splicing factor-related | chr5:2084988... 57 2e-09
AT5G51300.1 | Symbols: | splicing factor-related | chr5:2084988... 57 2e-09
AT5G19960.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 57 2e-09
AT2G33410.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 57 2e-09
AT5G53720.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 57 2e-09
AT2G21440.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 57 2e-09
AT2G23350.1 | Symbols: PAB4, PABP4 | poly(A) binding protein 4 |... 57 3e-09
AT3G16380.1 | Symbols: PAB6 | poly(A) binding protein 6 | chr3:5... 57 3e-09
AT5G47620.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 57 3e-09
AT1G17640.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 57 4e-09
AT1G03457.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 56 6e-09
AT1G03457.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 56 6e-09
AT5G19030.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 56 6e-09
AT2G18510.1 | Symbols: emb2444 | RNA-binding (RRM/RBD/RNP motifs... 56 6e-09
AT1G58470.1 | Symbols: ATRBP1, RBP1 | RNA-binding protein 1 | ch... 56 6e-09
AT2G19380.1 | Symbols: | RNA recognition motif (RRM)-containing... 55 6e-09
AT3G19130.1 | Symbols: ATRBP47B, RBP47B | RNA-binding protein 47... 55 7e-09
AT1G34140.1 | Symbols: PAB1 | poly(A) binding protein 1 | chr1:1... 55 9e-09
AT3G47120.1 | Symbols: | RNA recognition motif (RRM)-containing... 55 1e-08
AT4G00830.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 55 1e-08
AT4G00830.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 55 1e-08
AT4G00830.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 55 1e-08
AT1G22760.1 | Symbols: PAB3 | poly(A) binding protein 3 | chr1:8... 54 2e-08
AT4G19610.1 | Symbols: | nucleotide binding;nucleic acid bindin... 54 2e-08
AT4G16280.2 | Symbols: FCA | RNA binding;abscisic acid binding |... 54 2e-08
AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein 1A... 54 2e-08
AT4G16280.4 | Symbols: | RNA binding;abscisic acid binding | ch... 54 2e-08
AT4G36960.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 54 2e-08
AT4G36960.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 54 2e-08
AT4G16280.3 | Symbols: FCA | RNA binding;abscisic acid binding |... 54 2e-08
AT1G71800.1 | Symbols: CSTF64 | cleavage stimulating factor 64 |... 54 2e-08
AT3G56860.5 | Symbols: UBA2A | UBP1-associated protein 2A | chr3... 54 2e-08
AT3G56860.4 | Symbols: UBA2A | UBP1-associated protein 2A | chr3... 54 2e-08
AT3G56860.2 | Symbols: UBA2A | UBP1-associated protein 2A | chr3... 54 2e-08
AT3G56860.1 | Symbols: UBA2A | UBP1-associated protein 2A | chr3... 54 2e-08
AT3G56860.3 | Symbols: UBA2A | UBP1-associated protein 2A | chr3... 54 2e-08
AT1G01080.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 54 3e-08
AT1G01080.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 54 3e-08
AT4G03110.1 | Symbols: AtRBP-DR1, RBP-DR1 | RNA-binding protein-... 54 3e-08
AT4G09040.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 54 3e-08
AT3G50670.1 | Symbols: U1-70K, U1SNRNP | U1 small nuclear ribonu... 53 4e-08
AT4G09040.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 53 4e-08
AT2G35410.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 53 4e-08
AT1G47490.1 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47... 52 9e-08
AT3G52660.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 52 9e-08
AT3G52660.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 52 9e-08
AT1G07350.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 52 1e-07
AT3G10400.1 | Symbols: | RNA recognition motif and CCHC-type zi... 51 1e-07
AT2G41060.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 51 1e-07
AT2G41060.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 51 1e-07
AT2G36660.1 | Symbols: PAB7 | poly(A) binding protein 7 | chr2:1... 51 1e-07
AT1G71770.2 | Symbols: PAB5 | poly(A)-binding protein 5 | chr1:2... 51 1e-07
AT1G71770.1 | Symbols: PAB5 | poly(A)-binding protein 5 | chr1:2... 51 1e-07
AT1G47490.2 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47... 50 2e-07
AT2G22090.2 | Symbols: UBA1A | RNA-binding (RRM/RBD/RNP motifs) ... 50 2e-07
AT1G02840.2 | Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-... 50 2e-07
AT2G22090.1 | Symbols: UBA1A | RNA-binding (RRM/RBD/RNP motifs) ... 50 2e-07
AT1G02840.3 | Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-... 50 3e-07
AT1G02840.1 | Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-... 50 3e-07
AT1G49600.1 | Symbols: ATRBP47A, RBP47A | RNA-binding protein 47... 50 3e-07
AT3G15010.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 50 3e-07
AT3G15010.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 50 3e-07
AT1G47500.1 | Symbols: ATRBP47C', RBP47C' | RNA-binding protein ... 50 3e-07
AT5G09880.1 | Symbols: | Splicing factor, CC1-like | chr5:30816... 50 4e-07
AT2G43410.1 | Symbols: FPA | RNA binding | chr2:18026397-1803098... 49 5e-07
AT2G43410.4 | Symbols: FPA | RNA binding | chr2:18026397-1803098... 49 6e-07
AT2G43410.3 | Symbols: FPA | RNA binding | chr2:18026397-1803098... 49 6e-07
AT2G43410.2 | Symbols: FPA | RNA binding | chr2:18026397-1803098... 49 6e-07
AT5G06000.1 | Symbols: EIF3G2, ATEIF3G2 | eukaryotic translation... 49 8e-07
AT3G04500.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 49 9e-07
AT5G54900.1 | Symbols: ATRBP45A, RBP45A | RNA-binding protein 45... 49 9e-07
AT1G07350.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 49 1e-06
AT4G00830.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 49 1e-06
AT5G44200.2 | Symbols: CBP20, ATCBP20 | CAP-binding protein 20 |... 48 1e-06
AT5G44200.1 | Symbols: CBP20, ATCBP20 | CAP-binding protein 20 |... 48 1e-06
AT3G06970.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 48 2e-06
AT5G64200.2 | Symbols: ATSC35, SC35, At-SC35 | ortholog of human... 47 2e-06
AT5G64200.1 | Symbols: ATSC35, SC35, At-SC35 | ortholog of human... 47 2e-06
AT3G11400.2 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation... 47 2e-06
AT1G48920.1 | Symbols: ATNUC-L1, PARL1, NUC-L1 | nucleolin like ... 47 2e-06
AT3G11400.1 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation... 47 2e-06
AT4G02430.2 | Symbols: SR34b, At-SR34b | RNA-binding (RRM/RBD/RN... 47 4e-06
AT4G02430.1 | Symbols: SR34b, At-SR34b | RNA-binding (RRM/RBD/RN... 47 4e-06
AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding (RRM/RBD/R... 46 4e-06
AT4G35785.5 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 46 6e-06
AT4G35785.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 46 6e-06
AT2G44710.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 46 6e-06
AT4G35785.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 46 6e-06
AT5G41690.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 45 8e-06
>AT5G61030.1 | Symbols: GR-RBP3 | glycine-rich RNA-binding protein 3
| chr5:24560870-24562152 FORWARD LENGTH=309
Length = 309
Score = 151 bits (382), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 95/113 (84%)
Query: 1 MAFIGKIGKLLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAF 60
MAF+ K G +LK + K ++ VS+S+PS+FQAIR MSS+K+F+GG++YS D+ SLREAF
Sbjct: 1 MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAF 60
Query: 61 SRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
++YGEV++ ++I+D ++ RSRGFGFVT+ +SE ASSAIQALDG+DLHGR ++V
Sbjct: 61 TKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKV 113
>AT1G74230.1 | Symbols: GR-RBP5 | glycine-rich RNA-binding protein 5
| chr1:27915346-27916857 FORWARD LENGTH=289
Length = 289
Score = 137 bits (346), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 92/113 (81%), Gaps = 7/113 (6%)
Query: 1 MAFIGKIGKLLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAF 60
MAF+ K+G+L ++ H++ ++ SM Q+IR MSS+K+FVGGISYSTD+ LREAF
Sbjct: 1 MAFLSKVGRLFSQTS-SHVT-----ASSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAF 54
Query: 61 SRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
S+YGEV++AKIIVD ++ RSRGF FVT+ ++E+AS+A+Q LDGQDLHGRRIRV
Sbjct: 55 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRV 106
>AT4G13850.3 | Symbols: ATGRP2 | glycine-rich RNA-binding protein 2
| chr4:8021314-8022065 FORWARD LENGTH=144
Length = 144
Score = 112 bits (280), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 83/113 (73%), Gaps = 5/113 (4%)
Query: 1 MAFIGKIGKLLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAF 60
MAF K+G LL+ ++IS + +V SM ++R MS+ K+F+GG+S+ TDD SLR+AF
Sbjct: 1 MAFCNKLGGLLR----QNISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAF 55
Query: 61 SRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
+ +G+V++AK+IVD ++ RSRGFGFV + A++AI +DG++L+GR IRV
Sbjct: 56 AHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRV 108
>AT4G13850.2 | Symbols: ATGRP2 | glycine-rich RNA-binding protein 2
| chr4:8021314-8022065 FORWARD LENGTH=153
Length = 153
Score = 112 bits (280), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 83/113 (73%), Gaps = 5/113 (4%)
Query: 1 MAFIGKIGKLLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAF 60
MAF K+G LL+ ++IS + +V SM ++R MS+ K+F+GG+S+ TDD SLR+AF
Sbjct: 1 MAFCNKLGGLLR----QNISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAF 55
Query: 61 SRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
+ +G+V++AK+IVD ++ RSRGFGFV + A++AI +DG++L+GR IRV
Sbjct: 56 AHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRV 108
>AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | glycine-rich
RNA-binding protein 2 | chr4:8021314-8022065 FORWARD
LENGTH=158
Length = 158
Score = 112 bits (280), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 83/113 (73%), Gaps = 5/113 (4%)
Query: 1 MAFIGKIGKLLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAF 60
MAF K+G LL+ ++IS + +V SM ++R MS+ K+F+GG+S+ TDD SLR+AF
Sbjct: 1 MAFCNKLGGLLR----QNISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAF 55
Query: 61 SRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
+ +G+V++AK+IVD ++ RSRGFGFV + A++AI +DG++L+GR IRV
Sbjct: 56 AHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRV 108
>AT4G13850.4 | Symbols: ATGRP2 | glycine-rich RNA-binding protein 2
| chr4:8021314-8022065 FORWARD LENGTH=129
Length = 129
Score = 112 bits (280), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 83/113 (73%), Gaps = 5/113 (4%)
Query: 1 MAFIGKIGKLLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAF 60
MAF K+G LL+ ++IS + +V SM ++R MS+ K+F+GG+S+ TDD SLR+AF
Sbjct: 1 MAFCNKLGGLLR----QNISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAF 55
Query: 61 SRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
+ +G+V++AK+IVD ++ RSRGFGFV + A++AI +DG++L+GR IRV
Sbjct: 56 AHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRV 108
>AT3G23830.2 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding
protein 4 | chr3:8606762-8607677 REVERSE LENGTH=136
Length = 136
Score = 109 bits (273), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 83/113 (73%), Gaps = 5/113 (4%)
Query: 1 MAFIGKIGKLLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAF 60
MAF K+ +L+ + +SQ + SM ++R MSS K+FVGG+S+ TDD+SL++AF
Sbjct: 1 MAFCNKLSGILR----QGVSQSSNGPVTSMLGSLRYMSS-KLFVGGLSWGTDDSSLKQAF 55
Query: 61 SRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
+ +GEV EA +I D ++ RSRGFGFV+++ + A++AI+ +DG++L+GR+IRV
Sbjct: 56 TSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRV 108
>AT3G23830.1 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding
protein 4 | chr3:8606762-8607677 REVERSE LENGTH=136
Length = 136
Score = 109 bits (273), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 83/113 (73%), Gaps = 5/113 (4%)
Query: 1 MAFIGKIGKLLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAF 60
MAF K+ +L+ + +SQ + SM ++R MSS K+FVGG+S+ TDD+SL++AF
Sbjct: 1 MAFCNKLSGILR----QGVSQSSNGPVTSMLGSLRYMSS-KLFVGGLSWGTDDSSLKQAF 55
Query: 61 SRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
+ +GEV EA +I D ++ RSRGFGFV+++ + A++AI+ +DG++L+GR+IRV
Sbjct: 56 TSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRV 108
>AT5G47320.1 | Symbols: RPS19 | ribosomal protein S19 |
chr5:19203801-19204951 FORWARD LENGTH=212
Length = 212
Score = 88.6 bits (218), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 73/113 (64%), Gaps = 9/113 (7%)
Query: 1 MAFIGKIGKLLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAF 60
MAF K+G H Q V+V SM ++R MS+ K+++GG+S TD+ SL++AF
Sbjct: 1 MAFCTKLGG--------HWKQGVNVPVSSMLGSLRYMST-KLYIGGLSPGTDEHSLKDAF 51
Query: 61 SRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
S + V EA+++ + + RSRG+GFV + + + A+SAI A++GQ+L+G I V
Sbjct: 52 SSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISV 104
>AT2G37220.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:15634980-15636331 REVERSE LENGTH=289
Length = 289
Score = 88.6 bits (218), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+V+VG +S+ DD +L FS G+V+EA++I D DS RS+GFGFVTY +S++ +AI++
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 101 LDGQDLHGRRIRV 113
LDG DL GR+IRV
Sbjct: 265 LDGADLDGRQIRV 277
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+FVG + ++ D L + F G V ++I D + RSRGFGFVT ++ + +A Q
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 101 LDGQDLHGRRIRV 113
+G +L GR +RV
Sbjct: 152 FNGYELDGRPLRV 164
>AT5G06210.1 | Symbols: | RNA binding (RRM/RBD/RNP motifs) family
protein | chr5:1878497-1879515 FORWARD LENGTH=146
Length = 146
Score = 86.3 bits (212), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 63/88 (71%)
Query: 26 STPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGF 85
S+ S F R ++K+F+GG+S+ T + L EAFS+ G+V+EA+I++D S RS+GFGF
Sbjct: 20 SSASCFFTQRRGVASKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGF 79
Query: 86 VTYATSEDASSAIQALDGQDLHGRRIRV 113
VT+A++++A A+ +GQ L+GR I V
Sbjct: 80 VTFASADEAQKALMEFNGQQLNGRTIFV 107
>AT2G21660.2 | Symbols: ATGRP7, CCR2 | cold, circadian rhythm, and
rna binding 2 | chr2:9265477-9266316 REVERSE LENGTH=159
Length = 159
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 55/73 (75%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+ FVGG++++TDD +L AF++YG+VI++KII D ++ RSRGFGFVT+ + AI+
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 101 LDGQDLHGRRIRV 113
++GQDL GR I V
Sbjct: 69 MNGQDLDGRSITV 81
>AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | cold,
circadian rhythm, and rna binding 2 |
chr2:9265477-9266316 REVERSE LENGTH=176
Length = 176
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 55/73 (75%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+ FVGG++++TDD +L AF++YG+VI++KII D ++ RSRGFGFVT+ + AI+
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 101 LDGQDLHGRRIRV 113
++GQDL GR I V
Sbjct: 69 MNGQDLDGRSITV 81
>AT1G18630.1 | Symbols: GR-RBP6 | glycine-rich RNA-binding protein 6
| chr1:6415226-6416283 FORWARD LENGTH=155
Length = 155
Score = 83.2 bits (204), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 62/85 (72%)
Query: 29 SMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTY 88
+M Q S++ +K+FVGG+S STD L+EAF +G++++A +++D +S SRGFGFVTY
Sbjct: 25 AMLQGNLSLTPSKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTY 84
Query: 89 ATSEDASSAIQALDGQDLHGRRIRV 113
+ E A++A+QA+ ++L GR I V
Sbjct: 85 DSIEVANNAMQAMQNKELDGRIIGV 109
>AT3G08000.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:2555034-2555829 REVERSE LENGTH=143
Length = 143
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+F+GG+S+S D+ SL++AFS +GEV E +I D S RSRGFGFV +A DA SA A
Sbjct: 42 KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 101
Query: 101 LDGQDLHGRRIRV 113
+DG+ L GR +R+
Sbjct: 102 MDGKGLLGRPLRI 114
>AT4G13860.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:8022601-8023162 FORWARD LENGTH=87
Length = 87
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 56/75 (74%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
+ +V+VG +S +T D LREAFS YG V++A ++ D + RSRGFGFVTY++ +A +A+
Sbjct: 2 ATRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAV 61
Query: 99 QALDGQDLHGRRIRV 113
+DG++L+GRR+ V
Sbjct: 62 SGMDGKELNGRRVSV 76
>AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | 31-kDa RNA
binding protein | chr4:12766223-12767952 REVERSE
LENGTH=329
Length = 329
Score = 79.3 bits (194), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 53/73 (72%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+V+VG + + D+ L + FS +G+V+EA+++ D ++ RSRGFGFVT + ++ + AI A
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 101 LDGQDLHGRRIRV 113
LDGQ+L GR IRV
Sbjct: 305 LDGQNLEGRAIRV 317
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 49/74 (66%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
AK+FVG ++Y + +L F + G V A++I + ++ +SRGFGFVT ++ ++A +A++
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209
Query: 100 ALDGQDLHGRRIRV 113
+ DL+GR + V
Sbjct: 210 KFNRYDLNGRLLTV 223
>AT3G53460.4 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
chr3:19819738-19821423 REVERSE LENGTH=363
Length = 363
Score = 78.6 bits (192), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 54/73 (73%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+++VG +S+ DD +L F+ G+V+EA++I D DS RS+GFGFVT ++S++ AI +
Sbjct: 279 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 338
Query: 101 LDGQDLHGRRIRV 113
L+G DL GR+IRV
Sbjct: 339 LNGADLDGRQIRV 351
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+FVG +S++ D L + F G V ++I D + RSRGFGFVT +T+ + +A Q
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 101 LDG 103
+G
Sbjct: 160 FNG 162
>AT3G53460.3 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
chr3:19819738-19821423 REVERSE LENGTH=342
Length = 342
Score = 78.6 bits (192), Expect = 9e-16, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 54/73 (73%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+++VG +S+ DD +L F+ G+V+EA++I D DS RS+GFGFVT ++S++ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 101 LDGQDLHGRRIRV 113
L+G DL GR+IRV
Sbjct: 318 LNGADLDGRQIRV 330
Score = 53.5 bits (127), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+FVG +S++ D L + F G V ++I D + RSRGFGFVT +T+ + +A Q
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 101 LDGQDLHGRRIRV 113
+G + GR +RV
Sbjct: 160 FNGYEFEGRPLRV 172
>AT3G53460.2 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
chr3:19819738-19821423 REVERSE LENGTH=342
Length = 342
Score = 78.6 bits (192), Expect = 9e-16, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 54/73 (73%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+++VG +S+ DD +L F+ G+V+EA++I D DS RS+GFGFVT ++S++ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 101 LDGQDLHGRRIRV 113
L+G DL GR+IRV
Sbjct: 318 LNGADLDGRQIRV 330
Score = 53.5 bits (127), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+FVG +S++ D L + F G V ++I D + RSRGFGFVT +T+ + +A Q
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 101 LDGQDLHGRRIRV 113
+G + GR +RV
Sbjct: 160 FNGYEFEGRPLRV 172
>AT3G53460.1 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
chr3:19819738-19821423 REVERSE LENGTH=342
Length = 342
Score = 78.6 bits (192), Expect = 9e-16, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 54/73 (73%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+++VG +S+ DD +L F+ G+V+EA++I D DS RS+GFGFVT ++S++ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 101 LDGQDLHGRRIRV 113
L+G DL GR+IRV
Sbjct: 318 LNGADLDGRQIRV 330
Score = 53.5 bits (127), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+FVG +S++ D L + F G V ++I D + RSRGFGFVT +T+ + +A Q
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 101 LDGQDLHGRRIRV 113
+G + GR +RV
Sbjct: 160 FNGYEFEGRPLRV 172
>AT4G39260.2 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
circadian rhythm, and RNA binding 1 |
chr4:18274166-18274958 REVERSE LENGTH=126
Length = 126
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 54/73 (73%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+ FVGG++++T+D L+ FS++G+VI++KII D +S RSRGFGFVT+ + AI+
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 101 LDGQDLHGRRIRV 113
++G++L GR I V
Sbjct: 67 MNGKELDGRVITV 79
>AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
circadian rhythm, and RNA binding 1 |
chr4:18274166-18274958 REVERSE LENGTH=169
Length = 169
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 54/73 (73%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+ FVGG++++T+D L+ FS++G+VI++KII D +S RSRGFGFVT+ + AI+
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 101 LDGQDLHGRRIRV 113
++G++L GR I V
Sbjct: 67 MNGKELDGRVITV 79
>AT4G39260.3 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
circadian rhythm, and RNA binding 1 |
chr4:18274166-18274958 REVERSE LENGTH=92
Length = 92
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 54/73 (73%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+ FVGG++++T+D L+ FS++G+VI++KII D +S RSRGFGFVT+ + AI+
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 101 LDGQDLHGRRIRV 113
++G++L GR I V
Sbjct: 67 MNGKELDGRVITV 79
>AT3G26420.1 | Symbols: ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs)
family protein with retrovirus zinc finger-like domain |
chr3:9671953-9673055 FORWARD LENGTH=245
Length = 245
Score = 75.1 bits (183), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 52/73 (71%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+ F+GG++++T D LR+AF +YG ++EAK+++D S RSRGFGF+T+ + AI A
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 101 LDGQDLHGRRIRV 113
++G DL GR I V
Sbjct: 68 MNGMDLDGRTITV 80
>AT1G60000.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:22093678-22094540 REVERSE LENGTH=258
Length = 258
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%)
Query: 32 QAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATS 91
+ + + K+FVG +S++ SL AF G+V+ A+++ D D+ RSRG+GFV Y++
Sbjct: 169 EPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSK 228
Query: 92 EDASSAIQALDGQDLHGRRIRV 113
+ +A+++LDG +L GR IRV
Sbjct: 229 AEMETALESLDGFELEGRAIRV 250
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
+ K++ G + Y+ D +L + + +++ + D+ +SRGF FVT + ED + I
Sbjct: 84 NTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIII 143
Query: 99 QALDGQDLHGRRIRV 113
LDG + GR ++V
Sbjct: 144 DNLDGTEYLGRALKV 158
>AT2G37510.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:15743112-15744504 REVERSE LENGTH=142
Length = 142
Score = 73.6 bits (179), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 55/78 (70%)
Query: 36 SMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDAS 95
+++S ++FV G+S T + L++AF+ +G++++A++I D DS RS+GFGFVTYAT EDA
Sbjct: 30 TLTSPRLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDAE 89
Query: 96 SAIQALDGQDLHGRRIRV 113
A ++ + L G I V
Sbjct: 90 KAKAEMNAKFLDGWVIFV 107
>AT3G46020.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:16912511-16913250 REVERSE LENGTH=102
Length = 102
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 55/75 (73%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
SA++FV +S T D SLR+ FS +G++ EA++I D ++QR +GFGF+T+ + +DA A+
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKAL 65
Query: 99 QALDGQDLHGRRIRV 113
++LDG+ + GR I V
Sbjct: 66 KSLDGKIVDGRLIFV 80
>AT5G50250.1 | Symbols: CP31B | chloroplast RNA-binding protein 31B
| chr5:20452677-20453965 REVERSE LENGTH=289
Length = 289
Score = 72.4 bits (176), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+++VG + + D L FS +G+V++A+++ D ++ RSRGFGFV + + + AI A
Sbjct: 208 RIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAA 267
Query: 101 LDGQDLHGRRIRV 113
LDGQ+L GR I+V
Sbjct: 268 LDGQNLEGRAIKV 280
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
AK+FVG + Y D +L F + G V +++I + D+ +SRGFGFVT +T E+A A++
Sbjct: 113 AKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVE 172
Query: 100 ALDGQDLHGRRIRV 113
+ +++GRR+ V
Sbjct: 173 KFNSFEVNGRRLTV 186
>AT3G20930.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:7331739-7333749 FORWARD LENGTH=374
Length = 374
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Query: 21 QDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRS 80
QD S S P + + K+F+ G+S+ T + +LR AF +GE++E KII+D S+RS
Sbjct: 271 QDDSESPP--------VKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 322
Query: 81 RGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
+G+ F+ Y T E A +A++ ++G+ ++G I V
Sbjct: 323 KGYAFLEYTTEEAAGTALKEMNGKIINGWMIVV 355
>AT5G54580.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22171332-22172656 FORWARD LENGTH=156
Length = 156
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 19 ISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQ 78
+S TP+ QA S +FV G+S T LR AF+++GEV +AK++ D S
Sbjct: 38 LSPQAESQTPARPQA---EPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSG 94
Query: 79 RSRGFGFVTYATSEDASSAIQALDGQDLHG 108
S+GFGFV YAT ED++ I +DG+ L G
Sbjct: 95 YSKGFGFVRYATLEDSAKGIAGMDGKFLDG 124
>AT2G27330.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:11695350-11696563 REVERSE LENGTH=116
Length = 116
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 27 TPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFV 86
TP +F RS SS +FV GIS+S+ + +L +AFS+YG+V++ +I+D R +GF +V
Sbjct: 11 TPLLFS--RSFSST-LFVKGISFSSTEETLTQAFSQYGQVLKVDVIMDKIRCRPKGFAYV 67
Query: 87 TYATSEDASSAIQALDGQDLHGRRI 111
T+++ E+A A+ L+ Q + GR +
Sbjct: 68 TFSSKEEAEKALLELNAQLVDGRVV 92
>AT4G39260.4 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
circadian rhythm, and RNA binding 1 |
chr4:18274166-18274958 REVERSE LENGTH=105
Length = 105
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 46/62 (74%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+ FVGG++++T+D L+ FS++G+VI++KII D +S RSRGFGFVT+ + AI+
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 101 LD 102
++
Sbjct: 67 MN 68
>AT1G76460.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:28686932-28688506 REVERSE LENGTH=285
Length = 285
Score = 65.1 bits (157), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
KVFVGG+++ T +LR+ F +YGE++EA +I D ++ RS+G+GFVT+ E A A
Sbjct: 25 KVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFRDPEAARRAC 82
>AT2G46780.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:19229516-19231043 FORWARD LENGTH=336
Length = 336
Score = 65.1 bits (157), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+FVGG+++ T ++R F ++GE++EA +I D ++ RS+G+GFVT+ +E A A Q
Sbjct: 23 KIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAMRACQN 82
Query: 101 LDGQDLHGRRIRV 113
++ + GRR
Sbjct: 83 MN-PVIDGRRANC 94
>AT1G73530.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:27643801-27645386 REVERSE LENGTH=181
Length = 181
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
K++V G+S+ T + +LR+ F ++G +I +++D + R +GF F+ Y T E+A A
Sbjct: 75 PKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKA 134
Query: 98 IQALDGQDLHGRRIRV 113
IQ + G+ L GR I V
Sbjct: 135 IQGMHGKFLDGRVIFV 150
>AT1G33470.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:12144632-12146040 FORWARD LENGTH=245
Length = 245
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
KVFVGG+++ T SLR F ++G+++EA +I D S RS+G+GFVT+ E A A
Sbjct: 8 KVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKAC 65
>AT1G33470.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:12144632-12146040 FORWARD LENGTH=244
Length = 244
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
KVFVGG+++ T SLR F ++G+++EA +I D S RS+G+GFVT+ E A A
Sbjct: 8 KVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKAC 65
>AT1G49760.2 | Symbols: PAB8 | poly(A) binding protein 8 |
chr1:18416740-18419753 FORWARD LENGTH=671
Length = 671
Score = 63.2 bits (152), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
+ ++VG + + D+ L EAF++ G+V+ ++ D ++RS G+G+V YAT +DAS A+
Sbjct: 44 TTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRAL 103
Query: 99 QALDGQDLHGRRIRV 113
L+ L+GR IRV
Sbjct: 104 NELNFMALNGRAIRV 118
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 24 SVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGF 83
SV PS+ R +F+ + S D +L E FS +G ++ K+ VD Q S+G+
Sbjct: 121 SVRDPSL----RKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQ-SKGY 175
Query: 84 GFVTYATSEDASSAIQALDGQDLHGRRIRV 113
GFV Y T E A AI L+G L+ +++ V
Sbjct: 176 GFVQYDTDEAAQGAIDKLNGMLLNDKQVYV 205
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 29 SMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTY 88
S+ +A + ++V + S D LRE F+ +G + K++ D S SRG GFV +
Sbjct: 316 SLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRD-PSGVSRGSGFVAF 374
Query: 89 ATSEDASSAIQALDGQ 104
+T E+A+ AI ++G+
Sbjct: 375 STPEEATRAITEMNGK 390
Score = 45.8 bits (107), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
V+V +S S D L + F +G I+ D + +S+GFGFV + S+DA+ A+ AL
Sbjct: 226 VYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEG-KSKGFGFVNFENSDDAARAVDAL 284
Query: 102 DGQ 104
+G+
Sbjct: 285 NGK 287
>AT1G49760.1 | Symbols: PAB8, PABP8 | poly(A) binding protein 8 |
chr1:18416740-18419753 FORWARD LENGTH=671
Length = 671
Score = 63.2 bits (152), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
+ ++VG + + D+ L EAF++ G+V+ ++ D ++RS G+G+V YAT +DAS A+
Sbjct: 44 TTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRAL 103
Query: 99 QALDGQDLHGRRIRV 113
L+ L+GR IRV
Sbjct: 104 NELNFMALNGRAIRV 118
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 24 SVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGF 83
SV PS+ R +F+ + S D +L E FS +G ++ K+ VD Q S+G+
Sbjct: 121 SVRDPSL----RKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQ-SKGY 175
Query: 84 GFVTYATSEDASSAIQALDGQDLHGRRIRV 113
GFV Y T E A AI L+G L+ +++ V
Sbjct: 176 GFVQYDTDEAAQGAIDKLNGMLLNDKQVYV 205
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 29 SMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTY 88
S+ +A + ++V + S D LRE F+ +G + K++ D S SRG GFV +
Sbjct: 316 SLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRD-PSGVSRGSGFVAF 374
Query: 89 ATSEDASSAIQALDGQ 104
+T E+A+ AI ++G+
Sbjct: 375 STPEEATRAITEMNGK 390
Score = 45.8 bits (107), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
V+V +S S D L + F +G I+ D + +S+GFGFV + S+DA+ A+ AL
Sbjct: 226 VYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEG-KSKGFGFVNFENSDDAARAVDAL 284
Query: 102 DGQ 104
+G+
Sbjct: 285 NGK 287
>AT5G04280.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein with retrovirus zinc finger-like domain |
chr5:1192461-1195413 FORWARD LENGTH=310
Length = 310
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
+++FVGG+S D L AFSR+G++++ +I+++ D+ RSRGFGF+T+A +I+
Sbjct: 7 SRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIR 66
Query: 100 ALDGQDLHGRRIRV 113
+ G+D R I V
Sbjct: 67 EMHGRDFGDRVISV 80
>AT1G60650.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein with retrovirus zinc finger-like domain |
chr1:22340089-22342148 FORWARD LENGTH=292
Length = 292
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
+++FVGG+S+ + L F RYG++ E +I+V D+ R RGFGF+T+ A AI
Sbjct: 11 ESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAI 70
Query: 99 QALDGQDL 106
+ + G++L
Sbjct: 71 KHMHGREL 78
>AT1G60650.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein with retrovirus zinc finger-like domain |
chr1:22340089-22342148 FORWARD LENGTH=292
Length = 292
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
+++FVGG+S+ + L F RYG++ E +I+V D+ R RGFGF+T+ A AI
Sbjct: 11 ESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAI 70
Query: 99 QALDGQDL 106
+ + G++L
Sbjct: 71 KHMHGREL 78
>AT3G07810.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:2492875-2495102 FORWARD LENGTH=495
Length = 495
Score = 62.8 bits (151), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
+ K+F+GGIS+ T++ L+E FS +GEVIEA I+ D + R+RGFGFV +A + A + I
Sbjct: 5 NGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFA--DPAVAEI 62
Query: 99 QALDGQDLHGRRI 111
+ ++ GR +
Sbjct: 63 VITEKHNIDGRLV 75
Score = 55.8 bits (133), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+FVGG+ S ++ + F ++G + ++ DH++QR RGFGF+TY SE+A +
Sbjct: 109 KIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITY-DSEEAVEKVLL 167
Query: 101 LDGQDLHGRRIRV 113
+L+G+ + V
Sbjct: 168 KTFHELNGKMVEV 180
>AT3G07810.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:2492875-2495052 FORWARD LENGTH=494
Length = 494
Score = 62.8 bits (151), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
+ K+F+GGIS+ T++ L+E FS +GEVIEA I+ D + R+RGFGFV +A + A + I
Sbjct: 5 NGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFA--DPAVAEI 62
Query: 99 QALDGQDLHGRRI 111
+ ++ GR +
Sbjct: 63 VITEKHNIDGRLV 75
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+FVGG+ S ++ + F ++G + ++ DH++QR RGFGF+TY SE+A +
Sbjct: 109 KIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITY-DSEEAVEKVLL 167
Query: 101 LDGQDLHGRRIRV 113
+L+G+ + V
Sbjct: 168 KTFHELNGKMVEV 180
>AT5G55550.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22502135-22503658 REVERSE LENGTH=460
Length = 460
Score = 62.8 bits (151), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYA---TSEDASS 96
K+F+GGIS+ TD+ LR+ FS YG+V+EA I+ D + R+RGFGF+ +A SE
Sbjct: 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIM 65
Query: 97 AIQALDGQDLHGRR 110
+DG+ + ++
Sbjct: 66 DKHIIDGRTVEAKK 79
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
+ K+FVGG+ S + + F ++G + + ++ DH++QR RGFGF+T+ S+DA +
Sbjct: 109 TKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITF-DSDDAVDRV 167
Query: 99 QALDGQDLHGRRIRV 113
+L+G+ + V
Sbjct: 168 LHKTFHELNGKLVEV 182
>AT5G55550.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22502135-22503658 REVERSE LENGTH=460
Length = 460
Score = 62.8 bits (151), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYA---TSEDASS 96
K+F+GGIS+ TD+ LR+ FS YG+V+EA I+ D + R+RGFGF+ +A SE
Sbjct: 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIM 65
Query: 97 AIQALDGQDLHGRR 110
+DG+ + ++
Sbjct: 66 DKHIIDGRTVEAKK 79
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
+ K+FVGG+ S + + F ++G + + ++ DH++QR RGFGF+T+ S+DA +
Sbjct: 109 TKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITF-DSDDAVDRV 167
Query: 99 QALDGQDLHGRRIRV 113
+L+G+ + V
Sbjct: 168 LHKTFHELNGKLVEV 182
>AT1G22910.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:8105808-8107949 FORWARD LENGTH=347
Length = 347
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 42/57 (73%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
KVFVGG+++ T ++++ F ++GE++EA +I D S RS+G+GFVT+ +E A SA
Sbjct: 14 KVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAARSA 70
>AT5G55550.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22502077-22503658 REVERSE LENGTH=448
Length = 448
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYA---TSEDASS 96
K+F+GGIS+ TD+ LR+ FS YG+V+EA I+ D + R+RGFGF+ +A SE
Sbjct: 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIM 65
Query: 97 AIQALDGQDLHGRR 110
+DG+ + ++
Sbjct: 66 DKHIIDGRTVEAKK 79
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
+ K+FVGG+ S + + F ++G + + ++ DH++QR RGFGF+T+ S+DA +
Sbjct: 109 TKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITF-DSDDAVDRV 167
Query: 99 QALDGQDLHGRRIRV 113
+L+G+ + V
Sbjct: 168 LHKTFHELNGKLVEV 182
>AT5G55550.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22502077-22503658 REVERSE LENGTH=448
Length = 448
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYA---TSEDASS 96
K+F+GGIS+ TD+ LR+ FS YG+V+EA I+ D + R+RGFGF+ +A SE
Sbjct: 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIM 65
Query: 97 AIQALDGQDLHGRR 110
+DG+ + ++
Sbjct: 66 DKHIIDGRTVEAKK 79
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
+ K+FVGG+ S + + F ++G + + ++ DH++QR RGFGF+T+ S+DA +
Sbjct: 109 TKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITF-DSDDAVDRV 167
Query: 99 QALDGQDLHGRRIRV 113
+L+G+ + V
Sbjct: 168 LHKTFHELNGKLVEV 182
>AT1G22910.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:8105808-8107659 FORWARD LENGTH=249
Length = 249
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
KVFVGG+++ T ++++ F ++GE++EA +I D S RS+G+GFVT+ +E A SA
Sbjct: 14 KVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAARSAC 71
>AT1G22910.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:8105808-8107618 FORWARD LENGTH=242
Length = 242
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
KVFVGG+++ T ++++ F ++GE++EA +I D S RS+G+GFVT+ +E A SA
Sbjct: 14 KVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAARSAC 71
>AT5G40490.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:16225483-16227423 FORWARD LENGTH=423
Length = 423
Score = 61.6 bits (148), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSED 93
+ K+FVGGI S DD +E F ++GE+ E +I+ DH + RSRGFGFVTY SED
Sbjct: 129 TKKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYE-SED 182
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
S+ K+FVGG++ T + F +YGE+ ++ I+ D + + RGFGFVTYA S
Sbjct: 40 SAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKV 99
Query: 98 IQALDGQDLHGRRIRV 113
IQ D + G+++ +
Sbjct: 100 IQ--DNHIIIGKQVEI 113
>AT4G26650.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:13445265-13447592 FORWARD LENGTH=452
Length = 452
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 30 MFQAIRSMSS-AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTY 88
M Q + S S K+F+GGIS+ TD+ L+E F +YG+++EA I+ D + R+RGFGF+ +
Sbjct: 1 MEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVF 60
Query: 89 ATSEDASSAIQALDGQDLHGRRIRV 113
A A I +D + GR +
Sbjct: 61 ADPSVAERVI--MDKHIIDGRTVEA 83
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+FVGG+ S + + F ++G + + ++ DH++QR RGFGF+T+ + E +
Sbjct: 120 KIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK 179
Query: 101 LDGQDLHGRRIRV 113
+L+G+ + V
Sbjct: 180 TF-HELNGKMVEV 191
>AT5G47620.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:19302548-19304278 REVERSE LENGTH=453
Length = 453
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 37 MSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASS 96
M S K+F+GGIS+ T + LR+ F +GEV+EA I+ D + R+RGFGFV +A A
Sbjct: 3 MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62
Query: 97 AI---QALDGQDL 106
+ +DG+ L
Sbjct: 63 VVLLKHIIDGKIL 75
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
+S K+FVGG++ S + ++ F+++G + + ++ DH +QR RGFGF++Y + E
Sbjct: 126 NSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKV 185
Query: 98 IQALDGQDLHGRRIRV 113
+Q +L+G+ + V
Sbjct: 186 LQKTF-HELNGKMVEV 200
>AT3G14100.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:4673027-4675950 FORWARD LENGTH=427
Length = 427
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
S +FVG +S D +L ++FS + +A+++ D + RSRGFGFV++ +DA +A
Sbjct: 142 SHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 201
Query: 98 IQALDGQDLHGRRIR 112
I ++G+ L R+IR
Sbjct: 202 INEMNGKWLSSRQIR 216
>AT1G20880.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:7262879-7264834 REVERSE LENGTH=274
Length = 274
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
KVFVGG+++ T +LR F +YG+++EA +I D ++ RS+G+GFVT+ E A A
Sbjct: 25 KVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRAC 82
>AT1G20880.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:7262879-7264834 REVERSE LENGTH=274
Length = 274
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
KVFVGG+++ T +LR F +YG+++EA +I D ++ RS+G+GFVT+ E A A
Sbjct: 25 KVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRAC 82
>AT1G13690.1 | Symbols: ATE1 | ATPase E1 | chr1:4693380-4694179
FORWARD LENGTH=177
Length = 177
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
++VGG++ +++ L AF +G++ + K +D +Q+ R FGFVT+ EDAS+A+ +
Sbjct: 15 LYVGGLADEVNESILHAAFIPFGDIKDVKTPLDQANQKHRSFGFVTFLEREDASAAMDNM 74
Query: 102 DGQDLHGRRIRV 113
DG +L+GR + V
Sbjct: 75 DGAELYGRVLTV 86
>AT5G47620.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:19302548-19304278 REVERSE LENGTH=431
Length = 431
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 37 MSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYA 89
M S K+F+GGIS+ T + LR+ F +GEV+EA I+ D + R+RGFGFV +A
Sbjct: 3 MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFA 55
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
+S K+FVGG++ S + ++ F+++G + + ++ DH +QR RGFGF++Y + E
Sbjct: 104 NSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKV 163
Query: 98 IQALDGQDLHGRRIRV 113
+Q +L+G+ + V
Sbjct: 164 LQKTF-HELNGKMVEV 178
>AT5G47620.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:19302548-19304278 REVERSE LENGTH=431
Length = 431
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 37 MSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYA 89
M S K+F+GGIS+ T + LR+ F +GEV+EA I+ D + R+RGFGFV +A
Sbjct: 3 MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFA 55
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
+S K+FVGG++ S + ++ F+++G + + ++ DH +QR RGFGF++Y + E
Sbjct: 104 NSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKV 163
Query: 98 IQALDGQDLHGRRIRV 113
+Q +L+G+ + V
Sbjct: 164 LQKTF-HELNGKMVEV 178
>AT3G13224.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:4254848-4256014 FORWARD LENGTH=231
Length = 231
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 41/58 (70%)
Query: 35 RSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSE 92
+ + + K+FVGGI + + L++ F++YG V+E ++I DH++ RSRGFGFV + + E
Sbjct: 104 KDIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEE 161
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 31 FQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYAT 90
FQ+ S K+F+GG+ T +T + F +YGE+ ++ I+ D + + RGFGF+T+A
Sbjct: 10 FQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFAD 69
Query: 91 SEDASSAIQALDGQDLHGRRIRV 113
I+ D ++G+++ +
Sbjct: 70 PSVVDKVIE--DTHVINGKQVEI 90
>AT1G78260.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:29447317-29450181 FORWARD LENGTH=287
Length = 287
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
KVFVGG+++ T +R F ++GE++EA II D ++ +S+G+GFVT+ S+ A+ A+
Sbjct: 18 KVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSATRAV 75
>AT1G78260.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:29447317-29449246 FORWARD LENGTH=271
Length = 271
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
KVFVGG+++ T +R F ++GE++EA II D ++ +S+G+GFVT+ S+ A+ A+
Sbjct: 18 KVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSATRAV 75
>AT4G26650.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:13445552-13447592 FORWARD LENGTH=455
Length = 455
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
K+F+GGIS+ TD+ L+E F +YG+++EA I+ D + R+RGFGF+ +A A I
Sbjct: 15 GKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI- 73
Query: 100 ALDGQDLHGRRIRV 113
+D + GR +
Sbjct: 74 -MDKHIIDGRTVEA 86
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+FVGG+ S + + F ++G + + ++ DH++QR RGFGF+T+ + E +
Sbjct: 123 KIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK 182
Query: 101 LDGQDLHGRRIRV 113
+L+G+ + V
Sbjct: 183 TF-HELNGKMVEV 194
>AT3G52380.1 | Symbols: CP33, PDE322 | chloroplast RNA-binding
protein 33 | chr3:19421619-19422855 FORWARD LENGTH=329
Length = 329
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 49/76 (64%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
S KV+ G + ++ L++AF V+ AK+I + ++ RSRGFGF+++ ++E+ SA
Sbjct: 217 SPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSA 276
Query: 98 IQALDGQDLHGRRIRV 113
+ ++G ++ GR +R+
Sbjct: 277 LATMNGVEVEGRALRL 292
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+++VG + Y+ + L + F G V++ +I+ D + RSRGFGFVT + E+A A+Q
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQM 176
Query: 101 LDGQDLHGRRIRV 113
+ + GR ++V
Sbjct: 177 FNSSQIGGRTVKV 189
>AT3G13224.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:4254848-4256621 FORWARD LENGTH=358
Length = 358
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 41/58 (70%)
Query: 35 RSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSE 92
+ + + K+FVGGI + + L++ F++YG V+E ++I DH++ RSRGFGFV + + E
Sbjct: 104 KDIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEE 161
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 31 FQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYAT 90
FQ+ S K+F+GG+ T +T + F +YGE+ ++ I+ D + + RGFGF+T+A
Sbjct: 10 FQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFAD 69
Query: 91 SEDASSAIQALDGQDLHGRRIRV 113
I+ D ++G+++ +
Sbjct: 70 PSVVDKVIE--DTHVINGKQVEI 90
>AT3G52150.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:19342074-19343090 FORWARD LENGTH=253
Length = 253
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
S KV+VG ++ + L FS G+V+ AK+ + +S GFGFVT+++ ED +A
Sbjct: 175 SPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAA 234
Query: 98 IQALDGQDLHGRRIRV 113
I AL+ L G++IRV
Sbjct: 235 IVALNNSLLEGQKIRV 250
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 36 SMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDAS 95
S ++ +V++G I + + L + +G V + +++ D S RSR FGF T + EDA+
Sbjct: 72 SEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDAN 131
Query: 96 SAIQALDGQDLHGRRIRV 113
+ ++ L+G + GR I+V
Sbjct: 132 AVVEKLNGNTVEGREIKV 149
>AT3G52150.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:19342074-19343090 FORWARD LENGTH=253
Length = 253
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
S KV+VG ++ + L FS G+V+ AK+ + +S GFGFVT+++ ED +A
Sbjct: 175 SPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAA 234
Query: 98 IQALDGQDLHGRRIRV 113
I AL+ L G++IRV
Sbjct: 235 IVALNNSLLEGQKIRV 250
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 36 SMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDAS 95
S ++ +V++G I + + L + +G V + +++ D S RSR FGF T + EDA+
Sbjct: 72 SEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDAN 131
Query: 96 SAIQALDGQDLHGRRIRV 113
+ ++ L+G + GR I+V
Sbjct: 132 AVVEKLNGNTVEGREIKV 149
>AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein 1A |
chr1:20183923-20186824 REVERSE LENGTH=426
Length = 426
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
S +FVG +S D +L ++FS + +A+++ D + RSRGFGFV++ +DA +A
Sbjct: 146 SHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 205
Query: 98 IQALDGQDLHGRRIR 112
I ++G+ + R+IR
Sbjct: 206 INEMNGKWVSSRQIR 220
>AT5G19030.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:6357503-6359081 REVERSE LENGTH=172
Length = 172
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 43 FVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALD 102
FV G S S + L++ FS +G+V KII + +++S G+G+V + + EDA SA++A++
Sbjct: 80 FVKGFSDSVSEGRLKKVFSEFGQVTNVKIIANERTRQSLGYGYVWFNSKEDAQSAVEAMN 139
Query: 103 GQDLHGRRIRV 113
G+ GR I V
Sbjct: 140 GKFFDGRFILV 150
>AT5G59860.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:24113462-24114449 FORWARD LENGTH=157
Length = 157
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 46 GISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALDGQD 105
G+S T D SLR+ F+ + A++I D +QR +GFGF+T+ + +DA A++AL+G+
Sbjct: 77 GLSAYTTDQSLRQLFAPF-----ARLIKDQQTQRPKGFGFITFESEDDAQKALKALNGKI 131
Query: 106 LHGRRI 111
++GR I
Sbjct: 132 VNGRLI 137
>AT5G08695.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:2829341-2834189 FORWARD LENGTH=690
Length = 690
Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 37 MSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASS 96
+ + ++FV G+ YST + L E FS++G++ E +++D D++ RG FV Y E A
Sbjct: 224 LDAGRLFVHGLPYSTTEEELMEHFSKFGDISEVHLVLDKDTRSCRGMAFVLYLIPESAKM 283
Query: 97 AIQALDGQDLHGRRIRV 113
A+ LD GR + +
Sbjct: 284 AMDKLDKLPFQGRTLHI 300
>AT5G11412.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:3640349-3640876 REVERSE LENGTH=175
Length = 175
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
K++VGG+ + T + LR F ++G++I ++ D ++ RS G+GFVT+ +E A+ A Q
Sbjct: 52 TKIYVGGLPWETRNEGLRSYFEQFGDIIHVNMVCDRETGRSEGYGFVTFRDAESATRACQ 111
Query: 100 ----ALDGQD 105
+DG++
Sbjct: 112 NPKPVIDGRE 121
>AT1G22330.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:7886693-7889241 FORWARD LENGTH=291
Length = 291
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
KVFVGG+++ T +R F ++GE++EA II D + +S+G+GFVT+ S+ A+ A+
Sbjct: 18 KVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYGFVTFRDSDSATRAV 75
>AT5G53680.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:21798382-21799109 FORWARD LENGTH=169
Length = 169
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
K++VGG+ ++T L F R+GE+I ++ D ++ RS+G+GFVT+ +E A+ A +
Sbjct: 13 TKIYVGGLPWTTRKEGLINFFKRFGEIIHVNVVCDRETDRSQGYGFVTFKDAESATRACK 72
>AT2G21690.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:9270114-9270597 REVERSE LENGTH=117
Length = 117
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
FV G+ TD+ L + FS++G VI++KII D D+ +SR FGFVT+ + + AI +
Sbjct: 9 CFVRGLDQDTDEKDLTDIFSKFGNVIDSKIIYDRDTGKSRRFGFVTFEEEKSMTDAIMIM 68
Query: 102 DGQDLHGRRIRV 113
D ++ + + V
Sbjct: 69 DVEESRSKCVNV 80
>AT4G14300.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:8231179-8232785 FORWARD LENGTH=411
Length = 411
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYA 89
K+FVGGIS+ TD+ LRE F+ YGEV +A ++ D + R RGFGFV ++
Sbjct: 6 GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFS 55
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
+ K+FVGG+ + D R+ F YG V + I+ D + R RGFGFV++ SEDA ++
Sbjct: 109 TKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSF-DSEDAVDSV 167
Query: 99 QALDGQDLHGRRIRV 113
DL G+++ V
Sbjct: 168 LHKTFHDLSGKQVEV 182
>AT3G54770.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:20273863-20275827 REVERSE LENGTH=261
Length = 261
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
KVFVGG+++ T ++ + F +YG+++EA II D ++RS+G+GFVT+ +DA +A +A
Sbjct: 18 KVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGFVTF---KDAKAATRA 74
Query: 101 LDGQD--LHGRR 110
+ ++GRR
Sbjct: 75 CEDSTPIINGRR 86
>AT4G34110.1 | Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding
protein 2 | chr4:16336732-16339892 FORWARD LENGTH=629
Length = 629
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 33 AIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSE 92
++R + +F+ + S D +L + FS +G ++ K+ VD Q S+G+GFV YA E
Sbjct: 117 SVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQ-SKGYGFVQYANEE 175
Query: 93 DASSAIQALDGQDLHGRRIRV 113
A AI+ L+G L+ +++ V
Sbjct: 176 SAQKAIEKLNGMLLNDKQVYV 196
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
++VG + ++ D+ L +AF + G V+ ++ D ++RS G+G+V + +DA+ AIQ L
Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97
Query: 102 DGQDLHGRRIRV 113
+ L+G+ IRV
Sbjct: 98 NYIPLYGKPIRV 109
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
V+V ++ ST D L+ AF YG++ A ++ D + +S+GFGFV + ++DA+ A+++
Sbjct: 216 NVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEG-KSKGFGFVNFENADDAARAVES 274
Query: 101 LDG 103
L+G
Sbjct: 275 LNG 277
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 29 SMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTY 88
++ +A S+ ++V + S D L+E FS +G V +K++ D + S+G GFV +
Sbjct: 307 NLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGT-SKGSGFVAF 365
Query: 89 ATSEDASSAIQALDGQDLHGRRIRV 113
AT E+A+ A+ L G+ + + + V
Sbjct: 366 ATPEEATEAMSQLSGKMIESKPLYV 390
>AT4G20030.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:10846362-10847246 FORWARD LENGTH=152
Length = 152
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
++K+ V + +ST + L+ FS +GE+ E K+I D +RS+G+ F+ + + +DA AI
Sbjct: 39 ASKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAI 98
Query: 99 QALDGQDLHGRRIRV 113
+ +D + +GR I +
Sbjct: 99 ETMDRRMYNGRMIYI 113
>AT1G17370.1 | Symbols: UBP1B | oligouridylate binding protein 1B |
chr1:5951842-5954825 REVERSE LENGTH=419
Length = 419
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+FVG +S D L FS Y +A+++ D + RSRGFGFV++ +DA +AI
Sbjct: 140 NIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDE 199
Query: 101 LDGQDLHGRRIRV 113
+ G+ L R+IR
Sbjct: 200 ITGKWLGSRQIRC 212
>AT2G22100.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:9392397-9393545 REVERSE LENGTH=382
Length = 382
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 33 AIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSE 92
A R S +FV G+ + T +L+ AF YGE+ E +++D D+ R++GFGFV + T +
Sbjct: 156 ADRDSSQRNIFVRGLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRK 215
Query: 93 DASSAIQ 99
A +A++
Sbjct: 216 GARAALK 222
>AT1G17370.2 | Symbols: UBP1B | oligouridylate binding protein 1B |
chr1:5951842-5954825 REVERSE LENGTH=416
Length = 416
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+FVG +S D L FS Y +A+++ D + RSRGFGFV++ +DA +AI
Sbjct: 140 NIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDE 199
Query: 101 LDGQDLHGRRIRV 113
+ G+ L R+IR
Sbjct: 200 ITGKWLGSRQIRC 212
>AT5G51300.3 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE LENGTH=804
Length = 804
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 26 STPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGF 85
STP+ + + +++G + +D L FS +GE++ AK+I D + S+G+GF
Sbjct: 467 STPTKPPS-KEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGF 525
Query: 86 VTYATSEDASSAIQALDGQDLHGRRIRV 113
V YA + A++A+QA++G GR + V
Sbjct: 526 VKYADVQMANTAVQAMNGYRFEGRTLAV 553
>AT5G51300.2 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE LENGTH=804
Length = 804
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 26 STPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGF 85
STP+ + + +++G + +D L FS +GE++ AK+I D + S+G+GF
Sbjct: 467 STPTKPPS-KEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGF 525
Query: 86 VTYATSEDASSAIQALDGQDLHGRRIRV 113
V YA + A++A+QA++G GR + V
Sbjct: 526 VKYADVQMANTAVQAMNGYRFEGRTLAV 553
>AT5G51300.1 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE LENGTH=804
Length = 804
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 26 STPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGF 85
STP+ + + +++G + +D L FS +GE++ AK+I D + S+G+GF
Sbjct: 467 STPTKPPS-KEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGF 525
Query: 86 VTYATSEDASSAIQALDGQDLHGRRIRV 113
V YA + A++A+QA++G GR + V
Sbjct: 526 VKYADVQMANTAVQAMNGYRFEGRTLAV 553
>AT5G19960.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:6744029-6746133 FORWARD LENGTH=337
Length = 337
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
V+VGG+ Y + ++R FS YG V+ KI+ D S R + +GFVT++ A AI+ +
Sbjct: 9 VYVGGLPYDITEEAVRRVFSIYGSVLTVKIVNDR-SVRGKCYGFVTFSNRRSADDAIEDM 67
Query: 102 DGQDLHGRRIRV 113
DG+ + GR +RV
Sbjct: 68 DGKSIGGRAVRV 79
>AT2G33410.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:14156085-14157435 FORWARD LENGTH=404
Length = 404
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYA 89
K+F+GGIS+ TD+ LRE FS +GEV++ ++ + + R RGFGFV ++
Sbjct: 6 GKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFS 55
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 31 FQAIRSMSSA------KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFG 84
F A R+ S K+FVGG+ + R F YG V +A I++D +QR RGFG
Sbjct: 95 FNASRNFDSGANVRTKKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFG 154
Query: 85 FVTYATSEDASSAIQALDGQDLHGRRIRV 113
FV++ SED+ + DL+G+++ V
Sbjct: 155 FVSF-DSEDSVDLVLHKTFHDLNGKQVEV 182
>AT5G53720.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:21806622-21807012 FORWARD LENGTH=100
Length = 100
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ- 99
K++V G+ + T L F R+GE++ AK++ D +QRS+GFGFVT+ E A+ A +
Sbjct: 10 KIYVAGLPWITRTEGLISYFERFGEIVYAKVVCDGATQRSKGFGFVTFREVESATRACEN 69
Query: 100 ---ALDGQDLHGR 109
+DG+ ++ +
Sbjct: 70 PNHTIDGRTVNCK 82
>AT2G21440.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:9173712-9179065 REVERSE LENGTH=1003
Length = 1003
Score = 57.0 bits (136), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
++A V V G+ YS + L EAFS G V ++ + S RGF FV +A ED + A
Sbjct: 18 AAATVCVSGLPYSITNAQLEEAFSEVGPVRRCFLVTNKGSDEHRGFAFVKFALQEDVNRA 77
Query: 98 IQALDGQDLHGRRIRV 113
I+ +G + GRRI V
Sbjct: 78 IELKNGSTVGGRRITV 93
>AT2G23350.1 | Symbols: PAB4, PABP4 | poly(A) binding protein 4 |
chr2:9943209-9946041 FORWARD LENGTH=662
Length = 662
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
+FV + S D+ +L EAFS G ++ K+ DH Q SRG+GFV + T + A +AI+ L
Sbjct: 136 LFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQ-SRGYGFVQFDTEDSAKNAIEKL 194
Query: 102 DGQDLHGRRIRV 113
+G+ L+ ++I V
Sbjct: 195 NGKVLNDKQIFV 206
Score = 53.1 bits (126), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 33 AIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSE 92
A M V+V +S +T D L+ F +YG + A ++ D D +SR FGFV + E
Sbjct: 218 AADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDG-KSRCFGFVNFENPE 276
Query: 93 DASSAIQALDGQ 104
DA+ A++AL+G+
Sbjct: 277 DAARAVEALNGK 288
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 44/72 (61%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
++VG + ++ D+ L + F+ +V+ ++ D + S G+G+V Y+ ++DA A+Q L
Sbjct: 48 LYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQKL 107
Query: 102 DGQDLHGRRIRV 113
+ L+G+ IR+
Sbjct: 108 NYSYLNGKMIRI 119
>AT3G16380.1 | Symbols: PAB6 | poly(A) binding protein 6 |
chr3:5558676-5560993 REVERSE LENGTH=537
Length = 537
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 7/111 (6%)
Query: 3 FIGKIGKLLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSR 62
F+GK L K+ + + Q S F A +M + ++V +S S ++T LRE F
Sbjct: 273 FVGK--ALKKDERREMLKQKFS----DNFIAKPNMRWSNLYVKNLSESMNETRLREIFGC 326
Query: 63 YGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
YG+++ AK++ H++ RS+GFGFV ++ E++ A + L+G + G+ I V
Sbjct: 327 YGQIVSAKVMC-HENGRSKGFGFVCFSNCEESKQAKRYLNGFLVDGKPIVV 376
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQ-RSRGFGFVTYATSEDASSA 97
S V+V + + D L FS+YG V + ++V D RSRGFGFV + E+A A
Sbjct: 201 STNVYVKNLIETVTDDCLHTLFSQYGTV--SSVVVMRDGMGRSRGFGFVNFCNPENAKKA 258
Query: 98 IQALDGQDLHGRRIRV 113
+++L G L +++ V
Sbjct: 259 MESLCGLQLGSKKLFV 274
>AT5G47620.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:19302548-19304106 REVERSE LENGTH=371
Length = 371
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
+S K+FVGG++ S + ++ F+++G + + ++ DH +QR RGFGF++Y + E
Sbjct: 44 NSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKV 103
Query: 98 IQALDGQDLHGRRIRV 113
+Q +L+G+ + V
Sbjct: 104 LQKTF-HELNGKMVEV 118
>AT1G17640.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:6067394-6069098 REVERSE LENGTH=369
Length = 369
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSE 92
K+FVGG+ ++ L+ F YG++IE +I+ DH + RSRGFGFVT+ T +
Sbjct: 158 KIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTED 209
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
K+FVGG+S+ T + F ++GEV+++ I+ D + RGFGFVT+A S A +
Sbjct: 65 PGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVL 124
Query: 99 Q 99
+
Sbjct: 125 E 125
>AT1G03457.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:861109-864019 REVERSE LENGTH=438
Length = 438
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 26 STPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGF 85
S PS Q + A +F+ I +D L F +G+V+ AK+ VD + S+ FGF
Sbjct: 326 SIPSSLQT-EGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGF 384
Query: 86 VTYATSEDASSAIQALDGQDLHGRRIRV 113
++Y + A +AI ++G L G++++V
Sbjct: 385 ISYDSQAAAQNAINTMNGCQLSGKKLKV 412
>AT1G03457.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:861109-864019 REVERSE LENGTH=429
Length = 429
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 26 STPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGF 85
S PS Q + A +F+ I +D L F +G+V+ AK+ VD + S+ FGF
Sbjct: 317 SIPSSLQT-EGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGF 375
Query: 86 VTYATSEDASSAIQALDGQDLHGRRIRV 113
++Y + A +AI ++G L G++++V
Sbjct: 376 ISYDSQAAAQNAINTMNGCQLSGKKLKV 403
>AT5G19030.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:6357570-6359024 REVERSE LENGTH=126
Length = 126
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 43 FVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALD 102
FV G S S + L++ FS +G+V KII + +++S G+G+V + + EDA SA++A++
Sbjct: 61 FVKGFSDSVSEGRLKKVFSEFGQVTNVKIIANERTRQSLGYGYVWFNSKEDAQSAVEAMN 120
Query: 103 GQ 104
G+
Sbjct: 121 GK 122
>AT2G18510.1 | Symbols: emb2444 | RNA-binding (RRM/RBD/RNP motifs)
family protein | chr2:8031554-8033517 REVERSE LENGTH=363
Length = 363
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIE-AKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
A +F+G + D+ L + FS +G + KI+ D D+ SRGFGF++Y + E + +AI
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
Query: 99 QALDGQDLHGRRIRV 113
+++ GQ L R+I V
Sbjct: 172 ESMTGQYLSNRQITV 186
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
A V+VGG+ + L E F + G V+ + D + + +GF+ Y + EDA AI+
Sbjct: 25 ATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIK 84
Query: 100 ALDGQDLHGRRIRV 113
L+ LHG+ IRV
Sbjct: 85 VLNMIKLHGKPIRV 98
>AT1G58470.1 | Symbols: ATRBP1, RBP1 | RNA-binding protein 1 |
chr1:21727374-21728539 FORWARD LENGTH=360
Length = 360
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30 MFQAIRSMSS-------AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRG 82
M +R MSS K+FVGG+S +T + + F R+G + ++ D + R RG
Sbjct: 103 MNGGLREMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRG 162
Query: 83 FGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
FGFVTY SED+ + + +L +R+ V
Sbjct: 163 FGFVTY-DSEDSVEVVMQSNFHELSDKRVEV 192
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
K+FVGGI+ T + +L++ FSRYG V+EA + + + + RGFGFV +A D A++
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALR 65
>AT2G19380.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:8383856-8386604 FORWARD LENGTH=613
Length = 613
Score = 55.5 bits (132), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 33 AIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSE 92
A R ++ +FV G + T +L+ AF YGE+ E +++D D+ R +G+GFV + T +
Sbjct: 401 ADRDIAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTRK 460
Query: 93 DASSAIQ 99
A A++
Sbjct: 461 GAREALK 467
>AT3G19130.1 | Symbols: ATRBP47B, RBP47B | RNA-binding protein 47B |
chr3:6611398-6613823 REVERSE LENGTH=435
Length = 435
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 32 QAIRSMSSAKVFVGGISYSTDDTSLREAFS-RYGEVIEAKIIVDHDSQRSRGFGFVTYAT 90
+A+ + VFVG +S D L E FS RY V AK+++D ++ RS+G+GFV +
Sbjct: 194 RAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGD 253
Query: 91 SEDASSAIQALDGQDLHGRRIRV 113
+ S A+ ++G R++RV
Sbjct: 254 ENERSRALTEMNGAYCSNRQMRV 276
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
++A +FVGGI D LR+ FS++GEV+ KI V +G GFV +A + A A
Sbjct: 319 TNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPV------GKGCGFVQFADRKSAEDA 372
Query: 98 IQALDGQDLHGRRIRV 113
I++L+G + +R+
Sbjct: 373 IESLNGTVIGKNTVRL 388
>AT1G34140.1 | Symbols: PAB1 | poly(A) binding protein 1 |
chr1:12433356-12434735 REVERSE LENGTH=407
Length = 407
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 34 IRSMSSAK---VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYAT 90
IR M + K ++V + S D+T L E FS +G + K++V H + S+G GFV ++T
Sbjct: 214 IRDMKTRKGMNLYVKNLDDSVDNTKLEELFSEFGTITSCKVMV-HSNGISKGVGFVEFST 272
Query: 91 SEDASSAIQALDGQDLHGRRIRV 113
SE+AS A+ ++G+ + + I V
Sbjct: 273 SEEASKAMLKMNGKMVGNKPIYV 295
>AT3G47120.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:17351334-17352769 REVERSE LENGTH=352
Length = 352
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 22 DVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSR 81
D+ +S + + A + +SA V+VGGI + + L FS+YGE+++ +I D + +S+
Sbjct: 19 DLGISDEASWHA-KYKNSAYVYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSK 77
Query: 82 GFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
GF F+ Y A+ L+G + GR I+V
Sbjct: 78 GFAFLAYEDQRSTILAVDNLNGALVLGRTIKV 109
>AT4G00830.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:352842-354965 FORWARD LENGTH=467
Length = 467
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
++VF+GG+ + LR+ GE+ E +++ D DS S+G+ FV + T + A AI+
Sbjct: 96 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIE 155
Query: 100 ALDGQDLHGRRIR 112
L ++ G+ IR
Sbjct: 156 ELHSKEFKGKTIR 168
>AT4G00830.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:352782-354965 FORWARD LENGTH=495
Length = 495
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
++VF+GG+ + LR+ GE+ E +++ D DS S+G+ FV + T + A AI+
Sbjct: 116 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIE 175
Query: 100 ALDGQDLHGRRIR 112
L ++ G+ IR
Sbjct: 176 ELHSKEFKGKTIR 188
>AT4G00830.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:352782-354965 FORWARD LENGTH=495
Length = 495
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
++VF+GG+ + LR+ GE+ E +++ D DS S+G+ FV + T + A AI+
Sbjct: 116 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIE 175
Query: 100 ALDGQDLHGRRIR 112
L ++ G+ IR
Sbjct: 176 ELHSKEFKGKTIR 188
>AT1G22760.1 | Symbols: PAB3 | poly(A) binding protein 3 |
chr1:8055599-8058799 FORWARD LENGTH=660
Length = 660
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
A +++ + S DD L+E FS YG V +K++++ SRGFGFV Y+ E+A A+
Sbjct: 332 ANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGM-SRGFGFVAYSNPEEALRALS 390
Query: 100 ALDGQDLHGRR 110
++G+ + GR+
Sbjct: 391 EMNGK-MIGRK 400
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+F+ + S D+ +L E FS +G ++ K+ +D + RS+G+GFV + E A +AI
Sbjct: 137 NIFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDK 195
Query: 101 LDGQDLHGRRIRV 113
L+G ++ +++ V
Sbjct: 196 LNGMLMNDKQVFV 208
>AT4G19610.1 | Symbols: | nucleotide binding;nucleic acid
binding;RNA binding | chr4:10677482-10681623 FORWARD
LENGTH=816
Length = 816
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 45/77 (58%)
Query: 37 MSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASS 96
+ + ++FV + Y+ + L E FS +G++ E +++D +++RSRG ++ Y E A+
Sbjct: 291 LDTGRLFVRNLPYTATEEELMEHFSTFGKISEVHLVLDKETKRSRGIAYILYLIPECAAR 350
Query: 97 AIQALDGQDLHGRRIRV 113
A++ LD GR + +
Sbjct: 351 AMEELDNSSFQGRLLHI 367
>AT4G16280.2 | Symbols: FCA | RNA binding;abscisic acid binding |
chr4:9207164-9214412 REVERSE LENGTH=747
Length = 747
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
S+ K+FVG + + + +R F ++G V+E +I D + + +G FV YATS+DA A
Sbjct: 118 STVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRA 177
Query: 98 IQALDGQ 104
I+AL Q
Sbjct: 178 IRALHNQ 184
>AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein 1A |
chr1:20183923-20186824 REVERSE LENGTH=430
Length = 430
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVI----EAKIIVDHDSQRSRGFGFVTYATSED 93
S +FVG +S D +L ++FS + +A+++ D + RSRGFGFV++ +D
Sbjct: 146 SHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRNQQD 205
Query: 94 ASSAIQALDGQDLHGRRIR 112
A +AI ++G+ + R+IR
Sbjct: 206 AQTAINEMNGKWVSSRQIR 224
>AT4G16280.4 | Symbols: | RNA binding;abscisic acid binding |
chr4:9207164-9214187 REVERSE LENGTH=672
Length = 672
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
S+ K+FVG + + + +R F ++G V+E +I D + + +G FV YATS+DA A
Sbjct: 43 STVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRA 102
Query: 98 IQALDGQ 104
I+AL Q
Sbjct: 103 IRALHNQ 109
>AT4G36960.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:17427349-17429589 FORWARD LENGTH=379
Length = 379
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+ V GI + D L++ S++G++ + ++ D + RSRGFG+VT+A++EDA +A++
Sbjct: 4 KLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALK- 62
Query: 101 LDGQDLHGRRI 111
G+ G RI
Sbjct: 63 --GEHFLGNRI 71
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 22 DVSVSTP--SMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQR 79
+V V+TP M Q + ++ ++FV I S ++ R F RYGE+ + + D++S++
Sbjct: 73 EVKVATPKEEMRQPAKKVT--RIFVARIPSSVSESDFRSHFERYGEITDLYMPKDYNSKQ 130
Query: 80 SRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
RG GF+T+++++ ++ D DL G + V
Sbjct: 131 HRGIGFITFSSADSVEDLME--DTHDLGGTTVAV 162
>AT4G36960.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:17427349-17429589 FORWARD LENGTH=379
Length = 379
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+ V GI + D L++ S++G++ + ++ D + RSRGFG+VT+A++EDA +A++
Sbjct: 4 KLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALK- 62
Query: 101 LDGQDLHGRRI 111
G+ G RI
Sbjct: 63 --GEHFLGNRI 71
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 22 DVSVSTP--SMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQR 79
+V V+TP M Q + ++ ++FV I S ++ R F RYGE+ + + D++S++
Sbjct: 73 EVKVATPKEEMRQPAKKVT--RIFVARIPSSVSESDFRSHFERYGEITDLYMPKDYNSKQ 130
Query: 80 SRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
RG GF+T+++++ ++ D DL G + V
Sbjct: 131 HRGIGFITFSSADSVEDLME--DTHDLGGTTVAV 162
>AT4G16280.3 | Symbols: FCA | RNA binding;abscisic acid binding |
chr4:9208564-9214412 REVERSE LENGTH=533
Length = 533
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
S+ K+FVG + + + +R F ++G V+E +I D + + +G FV YATS+DA A
Sbjct: 118 STVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRA 177
Query: 98 IQALDGQ 104
I+AL Q
Sbjct: 178 IRALHNQ 184
>AT1G71800.1 | Symbols: CSTF64 | cleavage stimulating factor 64 |
chr1:26999606-27001850 FORWARD LENGTH=461
Length = 461
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
VFVG I Y + LRE G V+ +++ D ++ + +G+GF Y E A SA + L
Sbjct: 11 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 102 DGQDLHGRRIRV 113
+++GR++RV
Sbjct: 71 QSYEINGRQLRV 82
>AT3G56860.5 | Symbols: UBA2A | UBP1-associated protein 2A |
chr3:21050708-21052144 REVERSE LENGTH=478
Length = 478
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 14/95 (14%)
Query: 10 LLKNSAVKHISQDVSVSTPSMFQAIRSMSSA-----KVFVGGISYSTDDTSLREAFSRYG 64
LLK +A KH+ DV+ IR ++ K+FV G+ + T +L EAF +YG
Sbjct: 114 LLKEAAEKHV--DVA-------NRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYG 164
Query: 65 EVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
E+ + K + D S +S+G+GF+ Y + A +A++
Sbjct: 165 EIEDCKAVFDKISGKSKGYGFILYKSRSGARNALK 199
>AT3G56860.4 | Symbols: UBA2A | UBP1-associated protein 2A |
chr3:21050708-21052144 REVERSE LENGTH=478
Length = 478
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 14/95 (14%)
Query: 10 LLKNSAVKHISQDVSVSTPSMFQAIRSMSSA-----KVFVGGISYSTDDTSLREAFSRYG 64
LLK +A KH+ DV+ IR ++ K+FV G+ + T +L EAF +YG
Sbjct: 114 LLKEAAEKHV--DVA-------NRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYG 164
Query: 65 EVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
E+ + K + D S +S+G+GF+ Y + A +A++
Sbjct: 165 EIEDCKAVFDKISGKSKGYGFILYKSRSGARNALK 199
>AT3G56860.2 | Symbols: UBA2A | UBP1-associated protein 2A |
chr3:21050708-21052144 REVERSE LENGTH=478
Length = 478
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 14/95 (14%)
Query: 10 LLKNSAVKHISQDVSVSTPSMFQAIRSMSSA-----KVFVGGISYSTDDTSLREAFSRYG 64
LLK +A KH+ DV+ IR ++ K+FV G+ + T +L EAF +YG
Sbjct: 114 LLKEAAEKHV--DVA-------NRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYG 164
Query: 65 EVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
E+ + K + D S +S+G+GF+ Y + A +A++
Sbjct: 165 EIEDCKAVFDKISGKSKGYGFILYKSRSGARNALK 199
>AT3G56860.1 | Symbols: UBA2A | UBP1-associated protein 2A |
chr3:21050708-21052144 REVERSE LENGTH=478
Length = 478
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 14/95 (14%)
Query: 10 LLKNSAVKHISQDVSVSTPSMFQAIRSMSSA-----KVFVGGISYSTDDTSLREAFSRYG 64
LLK +A KH+ DV+ IR ++ K+FV G+ + T +L EAF +YG
Sbjct: 114 LLKEAAEKHV--DVA-------NRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYG 164
Query: 65 EVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
E+ + K + D S +S+G+GF+ Y + A +A++
Sbjct: 165 EIEDCKAVFDKISGKSKGYGFILYKSRSGARNALK 199
>AT3G56860.3 | Symbols: UBA2A | UBP1-associated protein 2A |
chr3:21050708-21052144 REVERSE LENGTH=478
Length = 478
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 14/95 (14%)
Query: 10 LLKNSAVKHISQDVSVSTPSMFQAIRSMSSA-----KVFVGGISYSTDDTSLREAFSRYG 64
LLK +A KH+ DV+ IR ++ K+FV G+ + T +L EAF +YG
Sbjct: 114 LLKEAAEKHV--DVA-------NRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYG 164
Query: 65 EVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
E+ + K + D S +S+G+GF+ Y + A +A++
Sbjct: 165 EIEDCKAVFDKISGKSKGYGFILYKSRSGARNALK 199
>AT1G01080.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:45503-46789 REVERSE LENGTH=294
Length = 294
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 20 SQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQR 79
+ +V STP + + S KV+VG + + T LR FS++G ++ +++ D + R
Sbjct: 195 NPEVLNSTPK--KILMYESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGR 252
Query: 80 SRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
+R F F+++ + E+ +A+ + +G GRRI V
Sbjct: 253 NRVFAFLSFTSGEERDAAL-SFNGTQYEGRRIIV 285
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 32 QAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIV-DHDSQRSRGFGFVTYAT 90
+ ++ +++V I S D L + F +G VI +++ + + SRG G+VT +
Sbjct: 100 EPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVVSRNPQTGESRGSGYVTMGS 159
Query: 91 SEDASSAIQALDGQDLHGRRIRV 113
A AI +LDG ++ GR +RV
Sbjct: 160 INSAKIAIASLDGTEVGGREMRV 182
>AT1G01080.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:45503-46789 REVERSE LENGTH=293
Length = 293
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 20 SQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQR 79
+ +V STP + + S KV+VG + + T LR FS++G ++ +++ D + R
Sbjct: 194 NPEVLNSTPK--KILMYESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGR 251
Query: 80 SRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
+R F F+++ + E+ +A+ + +G GRRI V
Sbjct: 252 NRVFAFLSFTSGEERDAAL-SFNGTQYEGRRIIV 284
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 32 QAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATS 91
+ ++ +++V I S D L + F +G VI ++ + + SRG G+VT +
Sbjct: 100 EPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSI 159
Query: 92 EDASSAIQALDGQDLHGRRIRV 113
A AI +LDG ++ GR +RV
Sbjct: 160 NSAKIAIASLDGTEVGGREMRV 181
>AT4G03110.1 | Symbols: AtRBP-DR1, RBP-DR1 | RNA-binding
protein-defense related 1 | chr4:1376612-1379275 REVERSE
LENGTH=441
Length = 441
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
A +F+ I D L AF +G V+ AK+ VD + S+ FGFV+Y + A +AI
Sbjct: 349 ANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAID 408
Query: 100 ALDGQDLHGRRIRV 113
++G+ L G++++V
Sbjct: 409 MMNGRHLGGKKLKV 422
>AT4G09040.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:5795075-5797315 REVERSE LENGTH=304
Length = 304
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 37 MSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASS 96
+S ++ + +++ +R F +YG VI+ ++ + H +R+RG F+ A+ E+A++
Sbjct: 91 ISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSM-HKKERNRGLVFIEMASPEEAAT 149
Query: 97 AIQALDGQDLHGRRIRV 113
A+++L+ + GRR++V
Sbjct: 150 ALKSLESCEYEGRRLKV 166
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 42 VFVGGISYSTDDTSLREAF-SRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+FV +++ L+E F + G V+ ++I + +RS G+GFV++ T + A +A+
Sbjct: 191 LFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIE 250
Query: 101 LDGQDLHGRRIRV 113
G+D GR IR+
Sbjct: 251 FQGKDFLGRPIRL 263
>AT3G50670.1 | Symbols: U1-70K, U1SNRNP | U1 small nuclear
ribonucleoprotein-70K | chr3:18826476-18829492 REVERSE
LENGTH=427
Length = 427
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 52/108 (48%)
Query: 6 KIGKLLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGE 65
+I KL V+ ++D+ P+ +FV ++Y + ++ ++ F YG
Sbjct: 104 RIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGP 163
Query: 66 VIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
+ ++ D + + +G+ F+ Y + D +A + DGQ + GRR+ V
Sbjct: 164 IKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVLV 211
>AT4G09040.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:5795075-5797193 REVERSE LENGTH=244
Length = 244
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 37 MSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASS 96
+S ++ + +++ +R F +YG VI+ ++ + H +R+RG F+ A+ E+A++
Sbjct: 31 ISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSM-HKKERNRGLVFIEMASPEEAAT 89
Query: 97 AIQALDGQDLHGRRIRV 113
A+++L+ + GRR++V
Sbjct: 90 ALKSLESCEYEGRRLKV 106
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 42 VFVGGISYSTDDTSLREAF-SRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+FV +++ L+E F + G V+ ++I + +RS G+GFV++ T + A +A+
Sbjct: 131 LFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIE 190
Query: 101 LDGQDLHGRRIRV 113
G+D GR IR+
Sbjct: 191 FQGKDFLGRPIRL 203
>AT2G35410.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:14898341-14899590 FORWARD LENGTH=308
Length = 308
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYG-EVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
K++V +++ T LRE F+ + A+++ RS G+GFV++AT E+A +AI
Sbjct: 195 KLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAENAIT 254
Query: 100 ALDGQDLHGRRI 111
L+G+++ GR I
Sbjct: 255 KLNGKEIMGRPI 266
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
K+FV + +S + E F + G V +II D ++RGF FVT A+ E+A +AI
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDG-KNRGFAFVTMASGEEAQAAIDK 154
Query: 101 LDGQDLHGRRIRV 113
D + GR I V
Sbjct: 155 FDTFQVSGRIISV 167
>AT1G47490.1 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47C |
chr1:17424801-17427182 FORWARD LENGTH=432
Length = 432
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 42 VFVGGISYSTDDTSLREAFS-RYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+FVG +S D L E FS +Y V AK+++D ++ RS+G+GFV + + + A+
Sbjct: 199 IFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTE 258
Query: 101 LDGQDLHGRRIRV 113
++G R +R+
Sbjct: 259 MNGVKCSSRAMRI 271
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
+FVGG+ S D L++ F+ +GE++ KI V +G GFV + +A A++ L
Sbjct: 306 IFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPV------GKGCGFVQFVNRPNAEEALEKL 359
Query: 102 DGQDLHGRRIRV 113
+G + + +R+
Sbjct: 360 NGTVIGKQTVRL 371
>AT3G52660.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:19522598-19524735 FORWARD LENGTH=471
Length = 471
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
++V++GGI + L+ GEV E +I+ + DS +G+ FVT+ + + A+ AI
Sbjct: 92 SEVYLGGIPTDATEGDLKGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAID 151
Query: 100 ALDGQDLHGRRIR 112
L+ D G+RI+
Sbjct: 152 TLNNTDFRGKRIK 164
>AT3G52660.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:19522598-19524735 FORWARD LENGTH=471
Length = 471
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
++V++GGI + L+ GEV E +I+ + DS +G+ FVT+ + + A+ AI
Sbjct: 92 SEVYLGGIPTDATEGDLKGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAID 151
Query: 100 ALDGQDLHGRRIR 112
L+ D G+RI+
Sbjct: 152 TLNNTDFRGKRIK 164
>AT1G07350.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:2258816-2259586 REVERSE LENGTH=129
Length = 129
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
++V G+S+ + L + F++ G+V + +++D ++ SRGFGF++ + DA+ I++L
Sbjct: 47 LYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSL 106
Query: 102 DGQDLHGRRIRV 113
D L GR I V
Sbjct: 107 DHSVLQGRVITV 118
>AT3G10400.1 | Symbols: | RNA recognition motif and CCHC-type zinc
finger domains containing protein | chr3:3232636-3233421
FORWARD LENGTH=261
Length = 261
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
++V + +S ++ + FS +G+V ++ D +++SRG FV Y + EDA+ A +++
Sbjct: 59 LYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSM 118
Query: 102 DGQDLHGRRIRV 113
D + L+GR++ V
Sbjct: 119 DAKILNGRKLTV 130
>AT2G41060.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:17127138-17128493 FORWARD LENGTH=451
Length = 451
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 10 LLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEA 69
LLK +A +H V+ A + K+FV G+ + T SL +AF +YGE+ +
Sbjct: 102 LLKEAAERH----RDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDC 157
Query: 70 KIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
K +VD S +S+G+GF+ + + A +A++
Sbjct: 158 KCVVDKVSGQSKGYGFILFKSRSGARNALK 187
>AT2G41060.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:17127138-17128493 FORWARD LENGTH=451
Length = 451
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 10 LLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEA 69
LLK +A +H V+ A + K+FV G+ + T SL +AF +YGE+ +
Sbjct: 102 LLKEAAERH----RDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDC 157
Query: 70 KIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
K +VD S +S+G+GF+ + + A +A++
Sbjct: 158 KCVVDKVSGQSKGYGFILFKSRSGARNALK 187
>AT2G36660.1 | Symbols: PAB7 | poly(A) binding protein 7 |
chr2:15361476-15364398 REVERSE LENGTH=609
Length = 609
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
+ ++V ++ + + LR+ FS+ G + K++ D + +S+GFGFV ++T E+A A++
Sbjct: 304 SNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCD-EKGKSKGFGFVCFSTPEEAIDAVK 362
Query: 100 ALDGQDLHGRRIRV 113
GQ HG+ + V
Sbjct: 363 TFHGQMFHGKPLYV 376
>AT1G71770.2 | Symbols: PAB5 | poly(A)-binding protein 5 |
chr1:26990777-26993489 REVERSE LENGTH=682
Length = 682
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 37 MSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASS 96
+ + +++ + S +D L+E FS YG V K++++ SRGFGFV Y+ E+A
Sbjct: 339 LQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQG-LSRGFGFVAYSNPEEALL 397
Query: 97 AIQALDGQDLHGRR 110
A++ ++G+ + GR+
Sbjct: 398 AMKEMNGK-MIGRK 410
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
VF+ + S D+ +L E FS +G ++ K+ +D RS+G+GFV + E A +AI
Sbjct: 147 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVG-RSKGYGFVQFEKEETAQAAIDK 205
Query: 101 LDGQDLHGRRIRV 113
L+G L+ +++ V
Sbjct: 206 LNGMLLNDKQVFV 218
>AT1G71770.1 | Symbols: PAB5 | poly(A)-binding protein 5 |
chr1:26990777-26993489 REVERSE LENGTH=682
Length = 682
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 37 MSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASS 96
+ + +++ + S +D L+E FS YG V K++++ SRGFGFV Y+ E+A
Sbjct: 339 LQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQG-LSRGFGFVAYSNPEEALL 397
Query: 97 AIQALDGQDLHGRR 110
A++ ++G+ + GR+
Sbjct: 398 AMKEMNGK-MIGRK 410
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
VF+ + S D+ +L E FS +G ++ K+ +D RS+G+GFV + E A +AI
Sbjct: 147 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVG-RSKGYGFVQFEKEETAQAAIDK 205
Query: 101 LDGQDLHGRRIRV 113
L+G L+ +++ V
Sbjct: 206 LNGMLLNDKQVFV 218
>AT1G47490.2 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47C |
chr1:17424801-17426114 FORWARD LENGTH=310
Length = 310
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 42 VFVGGISYSTDDTSLREAFS-RYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+FVG +S D L E FS +Y V AK+++D ++ RS+G+GFV + + + A+
Sbjct: 199 IFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTE 258
Query: 101 LDGQDLHGRRIRV 113
++G R +R+
Sbjct: 259 MNGVKCSSRAMRI 271
>AT2G22090.2 | Symbols: UBA1A | RNA-binding (RRM/RBD/RNP motifs)
family protein | chr2:9389407-9390450 REVERSE LENGTH=347
Length = 347
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 33 AIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSE 92
A R ++ K+FV G+ + T +L F YGE+ E +++D + +++GFGFV + T +
Sbjct: 97 ADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRK 156
Query: 93 DASSAIQ 99
A A++
Sbjct: 157 GAKEALK 163
>AT1G02840.2 | Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 |
RNA-binding (RRM/RBD/RNP motifs) family protein |
chr1:626918-628995 FORWARD LENGTH=285
Length = 285
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 36 SMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDAS 95
S SS V+VG + + + + FS+YG V++ + V R G+ FV + + DA
Sbjct: 3 SRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKV---PPRPPGYAFVEFDDARDAE 59
Query: 96 SAIQALDGQDLHGRRIRV 113
AI DG D G R+RV
Sbjct: 60 DAIHGRDGYDFDGHRLRV 77
>AT2G22090.1 | Symbols: UBA1A | RNA-binding (RRM/RBD/RNP motifs)
family protein | chr2:9388571-9390450 REVERSE LENGTH=343
Length = 343
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 33 AIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSE 92
A R ++ K+FV G+ + T +L F YGE+ E +++D + +++GFGFV + T +
Sbjct: 97 ADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRK 156
Query: 93 DASSAIQ 99
A A++
Sbjct: 157 GAKEALK 163
>AT1G02840.3 | Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 |
RNA-binding (RRM/RBD/RNP motifs) family protein |
chr1:626918-629583 FORWARD LENGTH=303
Length = 303
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 36 SMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDAS 95
S SS V+VG + + + + FS+YG V++ + V R G+ FV + + DA
Sbjct: 3 SRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKV---PPRPPGYAFVEFDDARDAE 59
Query: 96 SAIQALDGQDLHGRRIRV 113
AI DG D G R+RV
Sbjct: 60 DAIHGRDGYDFDGHRLRV 77
>AT1G02840.1 | Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 |
RNA-binding (RRM/RBD/RNP motifs) family protein |
chr1:626918-629583 FORWARD LENGTH=303
Length = 303
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 36 SMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDAS 95
S SS V+VG + + + + FS+YG V++ + V R G+ FV + + DA
Sbjct: 3 SRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKV---PPRPPGYAFVEFDDARDAE 59
Query: 96 SAIQALDGQDLHGRRIRV 113
AI DG D G R+RV
Sbjct: 60 DAIHGRDGYDFDGHRLRV 77
>AT1G49600.1 | Symbols: ATRBP47A, RBP47A | RNA-binding protein 47A |
chr1:18357236-18360150 REVERSE LENGTH=445
Length = 445
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 42 VFVGGISYSTDDTSLREAFS-RYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+FVG ++ D L E F+ RY V AK+++D ++ RS+G+GFV + + S A+
Sbjct: 215 IFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTE 274
Query: 101 LDGQDLHGRRIRV 113
++G R++RV
Sbjct: 275 MNGAFCSSRQMRV 287
>AT3G15010.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:5052844-5054058 FORWARD LENGTH=404
Length = 404
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 21 QDVSVSTPSMFQAIR-----SMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDH 75
Q+ V P + +++R +S K+F+ G++ T LR FS YG++ EA +I+D
Sbjct: 51 QEAIVRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDK 110
Query: 76 DSQRSRGFGFVTYATSEDASSAIQ 99
+ +S+G+GFVT+ + A A++
Sbjct: 111 VTGKSKGYGFVTFMHVDGALLALK 134
>AT3G15010.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:5052844-5054058 FORWARD LENGTH=404
Length = 404
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 21 QDVSVSTPSMFQAIR-----SMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDH 75
Q+ V P + +++R +S K+F+ G++ T LR FS YG++ EA +I+D
Sbjct: 51 QEAIVRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDK 110
Query: 76 DSQRSRGFGFVTYATSEDASSAIQ 99
+ +S+G+GFVT+ + A A++
Sbjct: 111 VTGKSKGYGFVTFMHVDGALLALK 134
>AT1G47500.1 | Symbols: ATRBP47C', RBP47C' | RNA-binding protein
47C' | chr1:17432682-17434805 FORWARD LENGTH=434
Length = 434
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 42 VFVGGISYSTDDTSLREAFS-RYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+FVG ++ D L E FS +Y V AK+++D ++ RS+G+GFV + + + A+
Sbjct: 201 IFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTE 260
Query: 101 LDGQDLHGRRIRV 113
++G R +R+
Sbjct: 261 MNGVKCSSRAMRI 273
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
+FVGG+ S D L++ FS +GE++ KI V +G GFV + +A A++ L
Sbjct: 308 IFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPV------GKGCGFVQFVNRPNAEEALEKL 361
Query: 102 DGQDLHGRRIRV 113
+G + + +R+
Sbjct: 362 NGTVIGKQTVRL 373
>AT5G09880.1 | Symbols: | Splicing factor, CC1-like |
chr5:3081646-3085179 REVERSE LENGTH=527
Length = 527
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 3 FIGKIGKLLKNSAVKHISQDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSR 62
F+G+ + + A K+++Q S + A R K++VG + ++ + LR+ F
Sbjct: 233 FLGQPVMVKPSEAEKNLAQSNSTTVGGTGPADR-----KLYVGNLHFNMSELQLRQIFEA 287
Query: 63 YGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQALDGQ-DLHGRRIRV 113
+G V ++ +D ++ + +GFGF+ + E + +A AL+G+ ++ GR I+V
Sbjct: 288 FGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKV 339
>AT2G43410.1 | Symbols: FPA | RNA binding | chr2:18026397-18030989
REVERSE LENGTH=858
Length = 858
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
S ++VG ++ T ++ L E F RYG++ + SRGF F+ Y E+A +A
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVY------SSRGFAFIYYRHVEEAVAAK 70
Query: 99 QALDGQDLHGRRIRV 113
+AL G +L+G +I++
Sbjct: 71 EALQGANLNGSQIKI 85
>AT2G43410.4 | Symbols: FPA | RNA binding | chr2:18026397-18030989
REVERSE LENGTH=901
Length = 901
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
S ++VG ++ T ++ L E F RYG++ + SRGF F+ Y E+A +A
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVY------SSRGFAFIYYRHVEEAVAAK 70
Query: 99 QALDGQDLHGRRIRV 113
+AL G +L+G +I++
Sbjct: 71 EALQGANLNGSQIKI 85
>AT2G43410.3 | Symbols: FPA | RNA binding | chr2:18026397-18030989
REVERSE LENGTH=901
Length = 901
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
S ++VG ++ T ++ L E F RYG++ + SRGF F+ Y E+A +A
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVY------SSRGFAFIYYRHVEEAVAAK 70
Query: 99 QALDGQDLHGRRIRV 113
+AL G +L+G +I++
Sbjct: 71 EALQGANLNGSQIKI 85
>AT2G43410.2 | Symbols: FPA | RNA binding | chr2:18026397-18030989
REVERSE LENGTH=901
Length = 901
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 39 SAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAI 98
S ++VG ++ T ++ L E F RYG++ + SRGF F+ Y E+A +A
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVY------SSRGFAFIYYRHVEEAVAAK 70
Query: 99 QALDGQDLHGRRIRV 113
+AL G +L+G +I++
Sbjct: 71 EALQGANLNGSQIKI 85
>AT5G06000.1 | Symbols: EIF3G2, ATEIF3G2 | eukaryotic translation
initiation factor 3G2 | chr5:1808169-1809742 FORWARD
LENGTH=308
Length = 308
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
V V +S T L E F +G V + +D + SRGFGFV++ + EDA AI L
Sbjct: 208 VRVTNLSEDTRGPDLMELFRPFGAVTRCHVAIDQKTSMSRGFGFVSFVSREDAQRAINKL 267
Query: 102 DG 103
+G
Sbjct: 268 NG 269
>AT3G04500.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:1212065-1213795 REVERSE LENGTH=245
Length = 245
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
++F G + +D L +AF+R+ AK+I D + +++G+GFV++ D ++A++
Sbjct: 138 RLFCGDLGNEVNDDVLSKAFARFPTFNMAKVIRDKRTGKTKGYGFVSFLNPADLAAALKE 197
Query: 101 LDGQDLHGRRIRV 113
++G+ + R I++
Sbjct: 198 MNGKYVGNRPIKL 210
>AT5G54900.1 | Symbols: ATRBP45A, RBP45A | RNA-binding protein 45A |
chr5:22295412-22298126 FORWARD LENGTH=387
Length = 387
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 42 VFVGGISYSTDDTSLREAFSR-YGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
+FVG ++ D L + F YG V AK+++D + RS+G+GFV +A + A+
Sbjct: 156 IFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTE 215
Query: 101 LDGQDLHGRRIRV 113
++GQ R +R+
Sbjct: 216 MNGQYCSTRPMRI 228
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 28 PSMFQAIRSMSSA-------KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRS 80
P+M+Q + ++ +FVGG+ + D L+ F ++GE++ KI
Sbjct: 241 PAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKI------PPG 294
Query: 81 RGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
+ GFV YA A A+ L+G L G+ IR+
Sbjct: 295 KRCGFVQYANKASAEHALSVLNGTQLGGQSIRL 327
>AT1G07350.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:2257732-2260101 REVERSE LENGTH=382
Length = 382
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
++V G+S+ + L + F++ G+V + +++D ++ SRGFGF++ + DA+ I++L
Sbjct: 77 LYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSL 136
Query: 102 DGQDLHGRRIRV 113
D L GR I V
Sbjct: 137 DHSVLQGRVITV 148
>AT4G00830.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:352782-354965 FORWARD LENGTH=495
Length = 495
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
++VF+GG+ + LR+ GE+ E +++ D DS S+G+ FV + T + A AI+
Sbjct: 116 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIE 175
Query: 100 ALDGQDL 106
L ++
Sbjct: 176 ELHSKEF 182
>AT5G44200.2 | Symbols: CBP20, ATCBP20 | CAP-binding protein 20 |
chr5:17802062-17803875 REVERSE LENGTH=257
Length = 257
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 32 QAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATS 91
+A+R+ S V++G +S+ T + L E FSR GE+ + + +D +++ GF FV + +
Sbjct: 28 EALRA--STTVYIGNVSFYTTEEQLYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLFYSR 85
Query: 92 EDASSAIQALDGQDLHGRRIRV 113
ED A++ + G L R IRV
Sbjct: 86 EDTEDAVKYISGTILDDRPIRV 107
>AT5G44200.1 | Symbols: CBP20, ATCBP20 | CAP-binding protein 20 |
chr5:17802062-17803875 REVERSE LENGTH=257
Length = 257
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 32 QAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATS 91
+A+R+ S V++G +S+ T + L E FSR GE+ + + +D +++ GF FV + +
Sbjct: 28 EALRA--STTVYIGNVSFYTTEEQLYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLFYSR 85
Query: 92 EDASSAIQALDGQDLHGRRIRV 113
ED A++ + G L R IRV
Sbjct: 86 EDTEDAVKYISGTILDDRPIRV 107
>AT3G06970.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:2199653-2201150 REVERSE LENGTH=317
Length = 317
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 40 AKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQ 99
K+FVG +++ T LR F ++G+V++A ++ + RS+G+GF+T+ D S ++
Sbjct: 12 TKIFVGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRSKGYGFITF---RDYVSTVR 68
Query: 100 AL 101
AL
Sbjct: 69 AL 70
>AT5G64200.2 | Symbols: ATSC35, SC35, At-SC35 | ortholog of human
splicing factor SC35 | chr5:25681849-25683553 REVERSE
LENGTH=303
Length = 303
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
+ V I++ T L F++YG+V++ I D + SRGF FV Y ++A A++ L
Sbjct: 18 LLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERL 77
Query: 102 DGQDLHGRRIRV 113
DG+ + GR I V
Sbjct: 78 DGRVVDGREITV 89
>AT5G64200.1 | Symbols: ATSC35, SC35, At-SC35 | ortholog of human
splicing factor SC35 | chr5:25681849-25683553 REVERSE
LENGTH=303
Length = 303
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
+ V I++ T L F++YG+V++ I D + SRGF FV Y ++A A++ L
Sbjct: 18 LLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERL 77
Query: 102 DGQDLHGRRIRV 113
DG+ + GR I V
Sbjct: 78 DGRVVDGREITV 89
>AT3G11400.2 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation
initiation factor 3G1 | chr3:3578536-3580366 FORWARD
LENGTH=321
Length = 321
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
V V +S T + L E F +G V + +D + SRGFGFV + + EDA AI L
Sbjct: 242 VRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKL 301
Query: 102 DG 103
+G
Sbjct: 302 NG 303
>AT1G48920.1 | Symbols: ATNUC-L1, PARL1, NUC-L1 | nucleolin like 1 |
chr1:18098186-18101422 FORWARD LENGTH=557
Length = 557
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 21 QDVSVSTPSMFQAIRSMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRS 80
Q + STP+ + S +F +S++ + + F GEV++ + + D
Sbjct: 284 QPKTPSTPA------AGGSKTLFAANLSFNIERADVENFFKEAGEVVDVRFSTNRDDGSF 337
Query: 81 RGFGFVTYATSEDASSAIQALDGQDLHGRRIRV 113
RGFG V +A+SE+A A++ G+ L GR IR+
Sbjct: 338 RGFGHVEFASSEEAQKALE-FHGRPLLGREIRL 369
>AT3G11400.1 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation
initiation factor 3G1 | chr3:3578536-3580366 FORWARD
LENGTH=294
Length = 294
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
V V +S T + L E F +G V + +D + SRGFGFV + + EDA AI L
Sbjct: 215 VRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKL 274
Query: 102 DG 103
+G
Sbjct: 275 NG 276
>AT4G02430.2 | Symbols: SR34b, At-SR34b | RNA-binding (RRM/RBD/RNP
motifs) family protein | chr4:1069186-1071313 FORWARD
LENGTH=278
Length = 278
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 36 SMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDAS 95
S SS ++VG + + + + FS+YG V++ + + R G+ FV + + DA
Sbjct: 3 SRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKI---PPRPPGYAFVEFEDARDAD 59
Query: 96 SAIQALDGQDLHGRRIRV 113
AI DG D G +RV
Sbjct: 60 DAIYGRDGYDFDGHHLRV 77
>AT4G02430.1 | Symbols: SR34b, At-SR34b | RNA-binding (RRM/RBD/RNP
motifs) family protein | chr4:1069186-1070543 FORWARD
LENGTH=178
Length = 178
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 36 SMSSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDAS 95
S SS ++VG + + + + FS+YG V++ + + R G+ FV + + DA
Sbjct: 3 SRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKI---PPRPPGYAFVEFEDARDAD 59
Query: 96 SAIQALDGQDLHGRRIRV 113
AI DG D G +RV
Sbjct: 60 DAIYGRDGYDFDGHHLRV 77
>AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding (RRM/RBD/RNP
motifs) family protein | chr1:3914895-3917941 FORWARD
LENGTH=405
Length = 405
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 38 SSAKVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSA 97
++ VFVGG+ S D L+ FS+YGE++ KI + GFV ++ A A
Sbjct: 259 NNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKI------PAGKRCGFVQFSEKSCAEEA 312
Query: 98 IQALDGQDLHGRRIRV 113
++ L+G L G +R+
Sbjct: 313 LRMLNGVQLGGTTVRL 328
>AT4G35785.5 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:16953404-16955127 REVERSE LENGTH=244
Length = 244
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
++V G+S D L F++ G+V ++++ ++ SRGF FVT ++ +DA I+ L
Sbjct: 88 LYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDAERCIKYL 147
Query: 102 DGQDLHGRRIRV 113
+ L GR I V
Sbjct: 148 NQSVLEGRYITV 159
>AT4G35785.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:16953404-16955127 REVERSE LENGTH=201
Length = 201
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
++V G+S D L F++ G+V ++++ ++ SRGF FVT ++ +DA I+ L
Sbjct: 88 LYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDAERCIKYL 147
Query: 102 DGQDLHGRRIRV 113
+ L GR I V
Sbjct: 148 NQSVLEGRYITV 159
>AT2G44710.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:18432902-18436629 FORWARD LENGTH=809
Length = 809
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%)
Query: 41 KVFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQA 100
++FVG + + L++ F GEV E +I+ + +++S+G F+ +AT E A A++
Sbjct: 215 EIFVGSLDKGASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFATVEQAKRAVKE 274
Query: 101 LDGQDLHGRRIRV 113
L ++G++ V
Sbjct: 275 LKSPMINGKKCGV 287
>AT4G35785.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:16953708-16955127 REVERSE LENGTH=207
Length = 207
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
++V G+S D L F++ G+V ++++ ++ SRGF FVT ++ +DA I+ L
Sbjct: 74 LYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDAERCIKYL 133
Query: 102 DGQDLHGRRIRV 113
+ L GR I V
Sbjct: 134 NQSVLEGRYITV 145
>AT5G41690.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:16670126-16674189 REVERSE LENGTH=567
Length = 567
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 42 VFVGGISYSTDDTSLREAFSRYGEVIEAKIIVDHDSQRSRGFGFVTYATSEDASSAIQAL 101
+FV +S T + + + F+ GEV+ +++V+H+ + G+GFV +A++++ A++
Sbjct: 187 LFVANLSPQTKISDIFDFFNCVGEVVSIRLMVNHEGKHV-GYGFVEFASADETKKALENK 245
Query: 102 DGQDLHGRRI 111
+G+ LH +I
Sbjct: 246 NGEYLHDHKI 255