Miyakogusa Predicted Gene

Lj1g3v2983440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2983440.1 Non Chatacterized Hit- tr|A5ARB7|A5ARB7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,52.44,3e-17,VC0467-like,NULL; no description,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
DU,NODE_35459_length_253_cov_155.968384.path2.1
         (86 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G29240.2 | Symbols:  | Protein of unknown function (DUF179) |...   108   6e-25
AT3G29240.1 | Symbols:  | Protein of unknown function (DUF179) |...   108   6e-25
AT1G33780.1 | Symbols:  | Protein of unknown function (DUF179) |...    68   1e-12

>AT3G29240.2 | Symbols:  | Protein of unknown function (DUF179) |
           chr3:11191780-11192868 FORWARD LENGTH=317
          Length = 317

 Score =  108 bits (270), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 52/82 (63%), Positives = 58/82 (70%), Gaps = 1/82 (1%)

Query: 1   MKGLYYGAKESVGCASEMVKRDVVGLGDFRFFDGYCGWEKEQLKDEIRAGYWTVAACXXX 60
           MKGLYYG +ESVG A+EMVKR++VG  + RFFDGYCGWEKEQLK EI  GYWTVAAC   
Sbjct: 229 MKGLYYGTRESVGLAAEMVKRNLVGRSELRFFDGYCGWEKEQLKAEILGGYWTVAACSST 288

Query: 61  XXXXXXXXXX-XXWDEVLGLMG 81
                        WDEVLGL+G
Sbjct: 289 VVELGSAVQSHGLWDEVLGLIG 310


>AT3G29240.1 | Symbols:  | Protein of unknown function (DUF179) |
           chr3:11191780-11192868 FORWARD LENGTH=317
          Length = 317

 Score =  108 bits (270), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 52/82 (63%), Positives = 58/82 (70%), Gaps = 1/82 (1%)

Query: 1   MKGLYYGAKESVGCASEMVKRDVVGLGDFRFFDGYCGWEKEQLKDEIRAGYWTVAACXXX 60
           MKGLYYG +ESVG A+EMVKR++VG  + RFFDGYCGWEKEQLK EI  GYWTVAAC   
Sbjct: 229 MKGLYYGTRESVGLAAEMVKRNLVGRSELRFFDGYCGWEKEQLKAEILGGYWTVAACSST 288

Query: 61  XXXXXXXXXX-XXWDEVLGLMG 81
                        WDEVLGL+G
Sbjct: 289 VVELGSAVQSHGLWDEVLGLIG 310


>AT1G33780.1 | Symbols:  | Protein of unknown function (DUF179) |
           chr1:12244799-12246034 REVERSE LENGTH=325
          Length = 325

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 2/81 (2%)

Query: 1   MKGLYYGAKESVGCASEMVKRDVVGLGDFRFFDGYCGWEKEQLKDEIRAGYWTVAACXXX 60
           M GL +G + S+  A+ +VK+ V+   +FRFF GY GW+ +QL++EI + YW VAAC   
Sbjct: 233 MPGLNFGTRNSLDEAAVLVKKGVLKPQEFRFFVGYAGWQLDQLREEIESDYWHVAAC--S 290

Query: 61  XXXXXXXXXXXXWDEVLGLMG 81
                       W+E+L LMG
Sbjct: 291 SDLICGASSENLWEEILQLMG 311