Miyakogusa Predicted Gene
- Lj1g3v2810570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2810570.1 Non Chatacterized Hit- tr|Q84Q17|Q84Q17_ORYSJ
Putative pentatricopeptide (PPR) repeat-containing
pro,22.67,2e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; no description,Tetratricopeptide-like,63138_g.1
(483 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 4e-83
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 2e-75
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 278 8e-75
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 268 8e-72
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 256 2e-68
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 7e-68
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 9e-68
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 1e-67
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 8e-67
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 246 4e-65
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 5e-65
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 5e-65
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 244 8e-65
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 244 1e-64
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 3e-64
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 6e-64
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 7e-64
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 241 1e-63
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 2e-63
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 3e-63
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 5e-63
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 9e-63
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 1e-62
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 236 3e-62
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 234 7e-62
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 7e-62
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 234 8e-62
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 233 3e-61
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 231 6e-61
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 231 7e-61
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 1e-60
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 228 9e-60
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 2e-59
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 226 3e-59
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 226 3e-59
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 5e-59
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 7e-59
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 8e-59
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 9e-59
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 9e-59
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 223 3e-58
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 222 4e-58
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 222 4e-58
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 4e-58
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 6e-58
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 219 3e-57
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 8e-57
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 217 2e-56
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 2e-56
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 215 4e-56
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 5e-56
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 215 7e-56
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 1e-55
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 213 2e-55
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 2e-55
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 4e-55
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 4e-55
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 6e-55
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 210 1e-54
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 210 2e-54
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 209 3e-54
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 4e-54
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 5e-54
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 6e-54
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 7e-54
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 9e-54
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 1e-53
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 206 2e-53
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 3e-53
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 9e-53
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 9e-53
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 9e-53
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 203 2e-52
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 6e-52
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 7e-52
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 9e-52
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 5e-51
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 6e-51
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 6e-51
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 6e-51
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 8e-51
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 3e-50
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 195 7e-50
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 2e-49
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 6e-49
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 8e-49
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 191 9e-49
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 3e-48
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 6e-48
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 187 2e-47
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 2e-47
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 2e-47
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 186 4e-47
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 5e-47
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 7e-47
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 184 1e-46
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 4e-46
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 5e-45
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 179 5e-45
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 7e-45
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 172 4e-43
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 7e-43
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 9e-43
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 166 4e-41
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 3e-40
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 6e-40
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 8e-36
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 6e-34
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 1e-33
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 3e-25
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 110 2e-24
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 103 4e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 100 3e-21
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 100 4e-21
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 9e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 93 3e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 6e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 88 1e-17
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 8e-17
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 85 9e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 83 5e-16
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 83 5e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 79 9e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 73 6e-13
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 72 7e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 70 5e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 66 5e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 7e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 65 7e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 65 2e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 63 4e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 60 2e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 59 5e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 6e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 6e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 56 6e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 54 3e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 54 3e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 50 3e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 175/487 (35%), Positives = 263/487 (54%), Gaps = 23/487 (4%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
F EM+A G CP+ SV K C+ +L+ G+ VH +++R G+D D+ N+++++Y K
Sbjct: 93 FVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAK 152
Query: 66 C----------KAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV 115
F+ + +G+ DV ++ G V + +F +P KDV
Sbjct: 153 LLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP--FGIDSVRR---VFEVMPRKDV 207
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
VS+NTII G + G AL ++ M + T V GK++HG
Sbjct: 208 VSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGY 267
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
VI ++ D +I SSLV+MY K R + + + + R G + WNS+V+GYV
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL---YCRDG-----ISWNSLVAGYV 319
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY 295
NG+Y + L+ FR MV ++VI ACA+ L G+Q+H Y+ + G + +
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG 355
+ S+L+ MYSK G++ A IF ++N + WT++I G ALHG G +A SLFE M QG
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 356 IVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET 415
+ PN+V F+ V+ ACSHVGL++E YF M VY +N +EH ++ DL GRAG L E
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
Query: 416 KNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSN 475
NFI + + SVW + LSSC +HKN+E+ + V+E + V + AY+L+ NM SN
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559
Query: 476 HRWDEAA 482
RW E A
Sbjct: 560 GRWKEMA 566
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 158/355 (44%), Gaps = 49/355 (13%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+ REM P+ +TLSSV S ++ GK +H +++R G+D+DV + +S++D+Y
Sbjct: 229 MVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYA 288
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
K E +ER+F D ++WN ++ Y+ G ++L +FR
Sbjct: 289 KSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQ--------------- 333
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
MV + V F + LGKQLHG V+ +
Sbjct: 334 ----------------MVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
FI S+LV+MY KCG A I +N+L V W +++ G+ +G + +
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDR--MNVLDE------VSWTAIIMGHALHGHGHEAV 429
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLE-----FGRQMHAYIQKIGHRIDAYVGSS 299
F M + + V++AC++ GL++ F Y + ++ Y ++
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY--GLNQELEHY--AA 485
Query: 300 LIHMYSKSGSLDDAW-VIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLN 353
+ + ++G L++A+ I + EP +W++++S C++H + A + E +
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/502 (31%), Positives = 270/502 (53%), Gaps = 27/502 (5%)
Query: 8 EMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCK 67
+M +G P Q+TL++V +A + ++ GK VH+++++ G+ +V + NS+L++Y KC
Sbjct: 136 DMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCG 195
Query: 68 AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIR 127
A+ +F+ D+ +WN MI ++ G ++ ++ F + +D+V+WN++I G +
Sbjct: 196 DPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQ 255
Query: 128 CGYERRALELLFCMVENGT-EFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNF 186
GY+ RAL++ M+ + T + +GKQ+H ++T +
Sbjct: 256 RGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI 315
Query: 187 INSSLVEMYCKCGRTDKASVIL-----KDVPL--------------------NLLRTGNS 221
+ ++L+ MY +CG + A ++ KD+ + N+ +
Sbjct: 316 VLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 375
Query: 222 GGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQM 281
+V W +M+ GY +G Y + + FRSMV + T+ ++S ++ L G+Q+
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 282 HAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGK 340
H K G V ++LI MY+K+G++ A F I E + WTSMI A HG
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 341 GKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCT 400
++A LFE ML +G+ P+ +T++GV +AC+H GL+ +G YF MMKDV I P + H
Sbjct: 496 AEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYA 555
Query: 401 SMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPS 460
MVDL+GRAG L E + FI + I W S LS+CR+HKNI++GK +E LL + P
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPE 615
Query: 461 DPEAYILLSNMCTSNHRWDEAA 482
+ AY L+N+ ++ +W+EAA
Sbjct: 616 NSGAYSALANLYSACGKWEEAA 637
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/528 (24%), Positives = 229/528 (43%), Gaps = 73/528 (13%)
Query: 15 CPNQYTLSSVFKCCS--AEKNLQLGKG------VHAWMLRNGVDADVVLVNSILDLYLKC 66
P +LS++ + C+ +K++ G VH ++++G+ V L+N+++++Y K
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 67 KAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLI 126
+A +LF+ +WN ++ AY GD++ + + F LP +D VSW T+I G
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 127 RCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNF 186
G +A+ ++ MV+ G E ++ T +E GK++H ++ L L G+
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 187 INSSLVEMYCKCGRTDKASVILK-----------------------DVPLNLLRTGNSGG 223
+++SL+ MY KCG A + D+ +
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 224 IVPWNSMVSGYVWNGKYEDCLKTFRSMVHE-LAIVDIRTVTTVISACANAGLLEFGRQMH 282
IV WNSM+SG+ G L F M+ + L D T+ +V+SACAN L G+Q+H
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 283 AYIQKIGHRIDAYVGSSLIHMYS---------------------------------KSGS 309
++I G I V ++LI MYS K G
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 310 LDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINA 369
++ A IF + + +V WT+MI G HG +A +LF M+ G PN T +++
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV 422
Query: 370 CSHVGLLEEGST-YFRMMK--DVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISH 426
S + L G + +K ++Y ++ +++ +Y +AG +
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIYSVSVS----NALITMYAKAGNITSASRAFDLIRCER 478
Query: 427 LTSVWKSFLSSCRLHKNIEMGKWVSE-MLLQVAPSDPEAYILLSNMCT 473
T W S + + H + E + E ML++ D Y+ + + CT
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT 526
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+LFR M G PN YTL+++ S+ +L GK +H +++G V + N+++ +
Sbjct: 398 INLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 63 YLKCKAFEYAERLFELTG-EGDVVTWNIMIRAYLGAGDVEKSLDMFRNL 110
Y K A R F+L E D V+W MI A G E++L++F +
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 150/483 (31%), Positives = 257/483 (53%), Gaps = 10/483 (2%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
L+ M + G PN YT V K C+ K + G+ +H +L+ G D D+ + S++
Sbjct: 118 ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLIS 177
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y++ E A ++F+ + DVV++ +I+ Y G +E + +F +P KDVVSWN +
Sbjct: 178 MYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAM 237
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
I G G + ALEL M++ E T +ELG+Q+H +
Sbjct: 238 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF 297
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ I ++L+++Y KCG + A + + +P ++ WN+++ GY Y+
Sbjct: 298 GSNLKIVNALIDLYSKCGELETACGLFERLPYK--------DVISWNTLIGGYTHMNLYK 349
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK--IGHRIDAYVGSS 299
+ L F+ M+ + T+ +++ ACA+ G ++ GR +H YI K G + + +S
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
LI MY+K G ++ A +F I ++ W +MI G A+HG+ + LF M GI P+
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Query: 360 EVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFI 419
++TF+G+++ACSH G+L+ G FR M Y + P +EH M+DL G +G E + I
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 529
Query: 420 FENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
+ +W S L +C++H N+E+G+ +E L+++ P +P +Y+LLSN+ S RW+
Sbjct: 530 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 589
Query: 480 EAA 482
E A
Sbjct: 590 EVA 592
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 178/363 (49%), Gaps = 25/363 (6%)
Query: 103 SLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXX 162
++ +F+ + +++ WNT+ G AL+L CM+ G + TF
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 163 XXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVP-------LNL 215
+ G+Q+HG V+ L + D ++++SL+ MY + GR + A + P L
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 216 LRTGNSGG----------------IVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDI 259
++ S G +V WN+M+SGY G Y++ L+ F+ M+ D
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
T+ TV+SACA +G +E GRQ+H +I G + + ++LI +YSK G L+ A +F +
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 320 INEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
+ +V W ++I G K+A LF+ ML G PN+VT L ++ AC+H+G ++ G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 380 S-TYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSC 438
+ + K + + TS++D+Y + G IE + +F + + S W + +
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD-IEAAHQVFNSILHKSLSSWNAMIFGF 445
Query: 439 RLH 441
+H
Sbjct: 446 AMH 448
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 42/283 (14%)
Query: 172 LHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVP--LNLLRTGNSGGIVPWNS 229
+H ++I + L+ N+ S L+E +C S + +P +++ +T ++ WN+
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIE-FCIL------SPHFEGLPYAISVFKTIQEPNLLIWNT 104
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG 289
M G+ + LK + M+ + + T V+ +CA + + G+Q+H ++ K+G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 290 HRIDAYVGSSLIHMYSKSGSLDDAWVI-------------------------------FR 318
+D YV +SLI MY ++G L+DA + F
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD 224
Query: 319 QINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEE 378
+I +V W +MISG A G K+A LF+ M+ + P+E T + V++AC+ G +E
Sbjct: 225 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 284
Query: 379 GSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
G + D + ++ +++DLY + G L ET +FE
Sbjct: 285 GRQVHLWIDD-HGFGSNLKIVNALIDLYSKCGEL-ETACGLFE 325
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 251/483 (51%), Gaps = 41/483 (8%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ F +R M+ G P+++T + K ++ + HA +++ G+D+D + NS++
Sbjct: 87 LSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGLDSDPFVRNSLI 145
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
Y F++A RLF+ GA D KDVV+W
Sbjct: 146 SGYSSSGLFDFASRLFD------------------GAED-------------KDVVTWTA 174
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI-TL 179
+IDG +R G A+ M + G +E+T V G+ +HG + T
Sbjct: 175 MIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETG 234
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
+ D FI SSLV+MY KC D A + ++P S +V W ++++GYV +
Sbjct: 235 RVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP--------SRNVVTWTALIAGYVQSRC 286
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
++ + F M+ + +T+++V+SACA+ G L GR++H Y+ K I+ G++
Sbjct: 287 FDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTT 346
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
LI +Y K G L++A ++F +++E NV+ WT+MI+G A HG + A LF ML+ + PN
Sbjct: 347 LIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPN 406
Query: 360 EVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFI 419
EVTF+ V++AC+H GL+EEG F MK + + P +H MVDL+GR G L E K I
Sbjct: 407 EVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALI 466
Query: 420 FENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
+ VW + SC LHK+ E+GK+ + ++++ PS Y LL+N+ + + WD
Sbjct: 467 ERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWD 526
Query: 480 EAA 482
E A
Sbjct: 527 EVA 529
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 268 bits (684), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 244/478 (51%), Gaps = 38/478 (7%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
++ MQ P+ +T + K CS +LQ+G+ VHA + R G DADV + N ++ LY
Sbjct: 106 MYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYA 165
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC+ A +FE LP + +VSW I+
Sbjct: 166 KCRRLGSARTVFEGL-----------------------------PLPERTIVSWTAIVSA 196
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+ G ALE+ M + + V ++ G+ +H V+ + L +
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ SL MY KCG+ A ++ + S ++ WN+M+SGY NG + +
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKM--------KSPNLILWNAMISGYAKNGYAREAI 308
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMY 304
F M+++ D ++T+ ISACA G LE R M+ Y+ + +R D ++ S+LI M+
Sbjct: 309 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 368
Query: 305 SKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFL 364
+K GS++ A ++F + + +V +W++MI G LHG+ ++A SL+ M G+ PN+VTFL
Sbjct: 369 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 428
Query: 365 GVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGI 424
G++ AC+H G++ EG +F M D + INP +H ++DL GRAG L + I +
Sbjct: 429 GLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487
Query: 425 SHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
+VW + LS+C+ H+++E+G++ ++ L + PS+ Y+ LSN+ + WD A
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 172/358 (48%), Gaps = 20/358 (5%)
Query: 90 MIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFS 149
+I A GD+ + +F +LP + WN II G R + + AL + M
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 150 EVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILK 209
TF +++G+ +H +V L + D F+ + L+ +Y KC R A + +
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 210 DVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISAC 269
+PL RT IV W ++VS Y NG+ + L+ F M D + +V++A
Sbjct: 179 GLPLP-ERT-----IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232
Query: 270 ANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWT 329
L+ GR +HA + K+G I+ + SL MY+K G + A ++F ++ PN+ LW
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 330 SMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM--- 386
+MISG A +G ++A +F M+N+ + P+ ++ I+AC+ VG LE+ + + +
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 387 ---KDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH 441
DV+ ++++D++ + G +E +F+ + VW + + LH
Sbjct: 353 DYRDDVFI-------SSALIDMFAKCGS-VEGARLVFDRTLDRDVVVWSAMIVGYGLH 402
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 127/270 (47%), Gaps = 14/270 (5%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
KQ+H R++ L L F+ + L+ G A + D+P I PWN+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP--------RPQIFPWNA 89
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG 289
++ GY N ++D L + +M D T ++ AC+ L+ GR +HA + ++G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 290 HRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEP--NVFLWTSMISGCALHGKGKQASSL 347
D +V + LI +Y+K L A +F + P + WT+++S A +G+ +A +
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 348 FEGMLNQGIVPNEVTFLGVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLY 406
F M + P+ V + V+NA + + L++G S + ++K I P + S+ +Y
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMY 267
Query: 407 GRAGCLIETKNFIFENGISHLTSVWKSFLS 436
+ G + T +F+ S +W + +S
Sbjct: 268 AKCG-QVATAKILFDKMKSPNLILWNAMIS 296
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 156/340 (45%), Gaps = 47/340 (13%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
+FS R+M K P+ L SV + ++L+ G+ +HA +++ G++ + L+ S+
Sbjct: 209 IFSQMRKMDVK---PDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y KC A+ LF+ +++ WN MI Y G +++DMF + +KDV
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
I I + +LE M E +G+ +
Sbjct: 326 ITSAISACAQVGSLEQARSMYEY-----------------------VGRSDY-------- 354
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
D FI+S+L++M+ KCG + A ++ RT + +V W++M+ GY +G+
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFD-------RTLDR-DVVVWSAMIVGYGLHGRAR 406
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVG--SS 299
+ + +R+M + T ++ AC ++G++ G + + H+I+ +
Sbjct: 407 EAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF--FNRMADHKINPQQQHYAC 464
Query: 300 LIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
+I + ++G LD A+ + + + +P V +W +++S C H
Sbjct: 465 VIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 256/505 (50%), Gaps = 61/505 (12%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
F M +G N+Y+ +SV CS ++ G VH+ + ++ +DV + ++++D+Y K
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL 125
C A+R+F+ G+ ++VVSWN++I
Sbjct: 200 CGNVNDAQRVFDEMGD-------------------------------RNVVSWNSLITCF 228
Query: 126 IRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI-TLALNGD 184
+ G AL++ M+E+ E EVT +++G+++HGRV+ L D
Sbjct: 229 EQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRND 288
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLN--LLRTGNSGG------------------- 223
++++ V+MY KC R +A I +P+ + T G
Sbjct: 289 IILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAE 348
Query: 224 --IVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQM 281
+V WN++++GY NG+ E+ L F + E + ++ ACA+ L G Q
Sbjct: 349 RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQA 408
Query: 282 HAYIQKIGHRI------DAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGC 335
H ++ K G + D +VG+SLI MY K G +++ +++FR++ E + W +MI G
Sbjct: 409 HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGF 468
Query: 336 ALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPG 395
A +G G +A LF ML G P+ +T +GV++AC H G +EEG YF M + + P
Sbjct: 469 AQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPL 528
Query: 396 VEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLL 455
+H T MVDL GRAG L E K+ I E + + +W S L++C++H+NI +GK+V+E LL
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLL 588
Query: 456 QVAPSDPEAYILLSNMCTSNHRWDE 480
+V PS+ Y+LLSNM +W++
Sbjct: 589 EVEPSNSGPYVLLSNMYAELGKWED 613
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 190/412 (46%), Gaps = 45/412 (10%)
Query: 40 VHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGD 99
VHA ++++G ++ + N ++D Y KC + E ++F+ + ++ TWN ++ G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 100 VEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXX 159
++++ +FR++P +D +WN+++ G + AL M + G +E +F
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 160 XXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTG 219
+ G Q+H + D +I S+LV+MY KCG + A + ++
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM-------- 213
Query: 220 NSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGR 279
+V WNS+++ + NG + L F+ M+ D T+ +VISACA+ ++ G+
Sbjct: 214 GDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQ 273
Query: 280 QMHAYIQKIGH-RIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCAL- 337
++H + K R D + ++ + MY+K + +A IF + NV TSMISG A+
Sbjct: 274 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 333
Query: 338 ------------------------------HGKGKQASSLFEGMLNQGIVPNEVTFLGVI 367
+G+ ++A SLF + + + P +F ++
Sbjct: 334 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 393
Query: 368 NACSHVGLLEEG-STYFRMMKDVYCINPGVEH----CTSMVDLYGRAGCLIE 414
AC+ + L G + ++K + G E S++D+Y + GC+ E
Sbjct: 394 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 169/349 (48%), Gaps = 23/349 (6%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNG-VDADVVLVNSIL 60
+F+ M P++ TL+SV C++ +++G+ VH +++N + D++L N+ +
Sbjct: 237 ALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFV 296
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
D+Y KC + A +F+ +V+ MI Y A + + MF + ++VVSWN
Sbjct: 297 DMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNA 356
Query: 121 IIDGLIRCGYERRALELLFCMVENGTE-FSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
+I G + G AL LFC+++ + + +F + LG Q H V+
Sbjct: 357 LIAGYTQNGENEEALS-LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKH 415
Query: 180 ALN------GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSG 233
D F+ +SL++MY KCG ++ ++ R V WN+M+ G
Sbjct: 416 GFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV--------FRKMMERDCVSWNAMIIG 467
Query: 234 YVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---IGH 290
+ NG + L+ FR M+ D T+ V+SAC +AG +E GR + + + +
Sbjct: 468 FAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAP 527
Query: 291 RIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
D Y + ++ + ++G L++A + ++ +P+ +W S+++ C +H
Sbjct: 528 LRDHY--TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 139/277 (50%), Gaps = 26/277 (9%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNS--GGIVP- 226
+ +H VI + + FI + L++ Y KCG + + +P + T NS G+
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 227 --------------------WNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVI 266
WNSMVSG+ + + E+ L F M E +++ + +V+
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 267 SACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVF 326
SAC+ + G Q+H+ I K D Y+GS+L+ MYSK G+++DA +F ++ + NV
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 327 LWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGS-TYFRM 385
W S+I+ +G +A +F+ ML + P+EVT VI+AC+ + ++ G + R+
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 386 MKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
+K+ N + + VD+Y + + E + FIF++
Sbjct: 280 VKNDKLRN-DIILSNAFVDMYAKCSRIKEAR-FIFDS 314
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 238/432 (55%), Gaps = 12/432 (2%)
Query: 55 LVNSILDLYLKCKAFEYAE----RLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL 110
LV+ IL L + A A+ ++ + EGDV N++I AY G VE + +F +
Sbjct: 63 LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 122
Query: 111 PSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGK 170
+ +VSWNT+I R E AL++ M G +FSE T K
Sbjct: 123 LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECK 182
Query: 171 QLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSM 230
+LH + ++ + ++ ++L+++Y KCG ++KD + + + V W+SM
Sbjct: 183 KLHCLSVKTCIDLNLYVGTALLDLYAKCG-------MIKDA-VQVFESMQDKSSVTWSSM 234
Query: 231 VSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGH 290
V+GYV N YE+ L +R + T+++VI AC+N L G+QMHA I K G
Sbjct: 235 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF 294
Query: 291 RIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEG 350
+ +V SS + MY+K GSL ++++IF ++ E N+ LW ++ISG A H + K+ LFE
Sbjct: 295 GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEK 354
Query: 351 MLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAG 410
M G+ PNEVTF +++ C H GL+EEG +F++M+ Y ++P V H + MVD+ GRAG
Sbjct: 355 MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 414
Query: 411 CLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSN 470
L E I S+W S L+SCR++KN+E+ + +E L ++ P + ++LLSN
Sbjct: 415 LLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSN 474
Query: 471 MCTSNHRWDEAA 482
+ +N +W+E A
Sbjct: 475 IYAANKQWEEIA 486
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 151/338 (44%), Gaps = 41/338 (12%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+F EM+ +G +++T+SSV C + K +H ++ +D ++ + ++LDL
Sbjct: 147 LDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDL 206
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC + A ++FE + VTW+ M+ Y+ + E++L ++R + +
Sbjct: 207 YAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTL 266
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
+I C N E GKQ+H +
Sbjct: 267 SSVI-------------CACSNLAALIE------------------GKQMHAVICKSGFG 295
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ F+ SS V+MY KCG ++ +I +V + WN+++SG+ + + ++
Sbjct: 296 SNVFVASSAVDMYAKCGSLRESYIIFSEV--------QEKNLELWNTIISGFAKHARPKE 347
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI-GHRIDAYVGSSLI 301
+ F M + + T ++++S C + GL+E GR+ ++ G + S ++
Sbjct: 348 VMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMV 407
Query: 302 HMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
+ ++G L +A+ + + I +P +W S+++ C ++
Sbjct: 408 DILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVY 445
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/477 (29%), Positives = 246/477 (51%), Gaps = 39/477 (8%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F +FR+MQ + PNQYT S+ K C +L+LG+ +H+ +++ + + + ++D+
Sbjct: 475 FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDM 534
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y K + A W+I+IR KDVVSW T+I
Sbjct: 535 YAKLGKLDTA--------------WDILIR-----------------FAGKDVVSWTTMI 563
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G + ++ +AL M++ G EV ++ G+Q+H + +
Sbjct: 564 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS 623
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
D ++LV +Y +CG+ +++ + + +G + WN++VSG+ +G E+
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQT--------EAGDNIAWNALVSGFQQSGNNEE 675
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
L+ F M E + T + + A + ++ G+Q+HA I K G+ + V ++LI
Sbjct: 676 ALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALIS 735
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MY+K GS+ DA F +++ N W ++I+ + HG G +A F+ M++ + PN VT
Sbjct: 736 MYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 795
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
+GV++ACSH+GL+++G YF M Y ++P EH +VD+ RAG L K FI E
Sbjct: 796 LVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM 855
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
I VW++ LS+C +HKN+E+G++ + LL++ P D Y+LLSN+ + +WD
Sbjct: 856 PIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWD 912
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 195/441 (44%), Gaps = 41/441 (9%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF +M G P Y SSV C ++L++G+ +H +L+ G +D + N+++ LY
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY- 333
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
F L G++ + +F N+ +D V++NT+I+G
Sbjct: 334 -----------FHL-------------------GNLISAEHIFSNMSQRDAVTYNTLING 363
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
L +CGY +A+EL M +G E T + G+QLH L +
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN 423
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
N I +L+ +Y KC + A L+ +V WN M+ Y +
Sbjct: 424 NKIEGALLNLYAKCADIETA--------LDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMY 304
+ FR M E + + T +++ C G LE G Q+H+ I K +++AYV S LI MY
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535
Query: 305 SKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFL 364
+K G LD AW I + +V WT+MI+G + +A + F ML++GI +EV
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 595
Query: 365 GVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGI 424
++AC+ + L+EG V + + ++V LY R G IE FE
Sbjct: 596 NAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCG-KIEESYLAFEQTE 653
Query: 425 SHLTSVWKSFLSSCRLHKNIE 445
+ W + +S + N E
Sbjct: 654 AGDNIAWNALVSGFQQSGNNE 674
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 184/413 (44%), Gaps = 43/413 (10%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEK-NLQLGKGVHAWMLRNGVDADVVLVNSIL 60
VF LF M ++ PN+ T S V + C + + +HA +L G+ V+ N ++
Sbjct: 170 VFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLI 229
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
DLY + + A R+F+ L KD SW
Sbjct: 230 DLYSRNGFVDLARRVFD-------------------------------GLRLKDHSSWVA 258
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+I GL + E A+ L M G + F +E+G+QLHG V+ L
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
+ D ++ ++LV +Y G A I ++ + V +N++++G G
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNM--------SQRDAVTYNTLINGLSQCGYG 370
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
E ++ F+ M + D T+ +++ AC+ G L G+Q+HAY K+G + + +L
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+++Y+K ++ A F + NV LW M+ L + + +F M + IVPN+
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 361 VTFLGVINACSHVGLLEEGST-YFRMMKDVYCINPGVEHCTSMVDLYGRAGCL 412
T+ ++ C +G LE G + +++K + +N V C+ ++D+Y + G L
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV--CSVLIDMYAKLGKL 541
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 184/430 (42%), Gaps = 45/430 (10%)
Query: 9 MQAKGACPNQYTLSSVFK-CCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCK 67
++ +G PN TL + + C +L G+ +H+ +L+ G+D++ L
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCL------------ 122
Query: 68 AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIR 127
+E+LF+ YL GD+ + +F +P + + +WN +I L
Sbjct: 123 ----SEKLFDF---------------YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163
Query: 128 CGYERRALELLFCMVENGTEFSEVTFXXXXXX-XXXXXXVELGKQLHGRVITLALNGDNF 186
L MV +E TF ++ +Q+H R++ L
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV 223
Query: 187 INSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKT 246
+ + L+++Y + G D A + + L + W +M+SG N + ++
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS--------WVAMISGLSKNECEAEAIRL 275
Query: 247 FRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSK 306
F M + ++V+SAC LE G Q+H + K+G D YV ++L+ +Y
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 307 SGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGV 366
G+L A IF +++ + + ++I+G + G G++A LF+ M G+ P+ T +
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395
Query: 367 INACSHVGLLEEGST-YFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGIS 425
+ ACS G L G + K + N +E ++++LY + + ++ E +
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETALDYFLETEVE 453
Query: 426 HLTSVWKSFL 435
++ +W L
Sbjct: 454 NVV-LWNVML 462
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/503 (30%), Positives = 250/503 (49%), Gaps = 64/503 (12%)
Query: 6 FREMQAKGAC-PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
F +M ++ C PN+YT + K + +L LG+ +H +++ V +DV + NS++ Y
Sbjct: 118 FLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYF 177
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
C GD++ + +F + KDVVSWN++I+G
Sbjct: 178 SC-------------------------------GDLDSACKVFTTIKEKDVVSWNSMING 206
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
++ G +ALEL M + S VT +E G+Q+ + +N +
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266
Query: 185 NFINSSLVEMYCKCGRTDKASVILK-----------------------DVPLNLLRTGNS 221
+ +++++MY KCG + A + + +L +
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 222 GGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI-----VDIRTVTTVISACANAGLLE 276
IV WN+++S Y NGK + L F HEL + ++ T+ + +SACA G LE
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVF----HELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 277 FGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCA 336
GR +H+YI+K G R++ +V S+LIHMYSK G L+ + +F + + +VF+W++MI G A
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 337 LHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGV 396
+HG G +A +F M + PN VTF V ACSH GL++E + F M+ Y I P
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 397 EHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQ 456
+H +VD+ GR+G L + FI I TSVW + L +C++H N+ + + LL+
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562
Query: 457 VAPSDPEAYILLSNMCTSNHRWD 479
+ P + A++LLSN+ +W+
Sbjct: 563 LEPRNDGAHVLLSNIYAKLGKWE 585
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 160/341 (46%), Gaps = 11/341 (3%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
LF++M+++ + T+ V C+ +NL+ G+ V +++ N V+ ++ L N++LD
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y KC + E A+RLF+ E D VTW M+ Y + D E + ++ ++P KD+V+WN +
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 122 IDGLIRCGYERRALELLF-CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
I + G AL + ++ + +++T +ELG+ +H +
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
+ + + S+L+ MY KCG +K+ + V + W++M+ G +G
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSV--------EKRDVFVWSAMIGGLAMHGCG 447
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQM-HAYIQKIGHRIDAYVGSS 299
+ + F M + T T V AC++ GL++ + H G + +
Sbjct: 448 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 300 LIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHG 339
++ + +SG L+ A + P+ +W +++ C +H
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 165/377 (43%), Gaps = 43/377 (11%)
Query: 98 GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMV-ENGTEFSEVTFXXX 156
+E + +F +P + +WNT+I ++ MV E+ ++ TF
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 157 XXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLL 216
+ LG+ LHG + A+ D F+ +SL+ Y CG D A + +
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI----- 192
Query: 217 RTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLE 276
+V WNSM++G+V G + L+ F+ M E T+ V+SACA LE
Sbjct: 193 ---KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249
Query: 277 FGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCA 336
FGRQ+ +YI++ ++ + ++++ MY+K GS++DA +F + E + WT+M+ G A
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 309
Query: 337 LHGKGKQASSLFEGMLNQGIV--------------PNE------------------VTFL 364
+ + A + M + IV PNE +T +
Sbjct: 310 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 369
Query: 365 GVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGI 424
++AC+ VG LE G +K + I ++++ +Y + G L +++ +F +
Sbjct: 370 STLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDLEKSRE-VFNSVE 427
Query: 425 SHLTSVWKSFLSSCRLH 441
VW + + +H
Sbjct: 428 KRDVFVWSAMIGGLAMH 444
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 155/476 (32%), Positives = 239/476 (50%), Gaps = 42/476 (8%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF M +G +++++ S+ S L LGK VH + L++G+ D+ + +S+ LY
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYS 496
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC G +E+S +F+ +P KD W ++I G
Sbjct: 497 KC-------------------------------GSLEESYKLFQGIPFKDNACWASMISG 525
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
GY R A+ L M+++GT E T + GK++HG + ++
Sbjct: 526 FNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG 585
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ S+LV MY KCG A + +P V +S++SGY +G +D
Sbjct: 586 MDLGSALVNMYSKCGSLKLARQVYDRLP--------ELDPVSCSSLISGYSQHGLIQDGF 637
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMY 304
FR MV +D +++++ A A + G Q+HAYI KIG + VGSSL+ MY
Sbjct: 638 LLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMY 697
Query: 305 SKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFL 364
SK GS+DD F QIN P++ WT++I+ A HGK +A ++ M +G P++VTF+
Sbjct: 698 SKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFV 757
Query: 365 GVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGI 424
GV++ACSH GL+EE + M Y I P H MVD GR+G L E ++FI I
Sbjct: 758 GVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHI 817
Query: 425 SHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
VW + L++C++H +E+GK ++ +++ PSD AYI LSN+ WDE
Sbjct: 818 KPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDE 873
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 194/417 (46%), Gaps = 55/417 (13%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
VF LF EM P+ YT SSV C++ + L+ GK V A +++ G + DV + +I+D
Sbjct: 235 VFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVD 293
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
LY KC G + +++++F +P+ VVSW +
Sbjct: 294 LYAKC-------------------------------GHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
+ G + ALE+ M +G E + T V Q+H V
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
D+ + ++L+ MY K G D + + +D L+ ++ N IV N M++ + + K
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQVFED--LDDIQRQN---IV--NVMITSFSQSKKPG 435
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
++ F M+ E D +V +++S L G+Q+H Y K G +D VGSSL
Sbjct: 436 KAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLDLTVGSSLF 492
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
+YSK GSL++++ +F+ I + W SMISG +G ++A LF ML+ G P+E
Sbjct: 493 TLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDES 552
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVY------CINPGVEHCTSMVDLYGRAGCL 412
T V+ CS L G K+++ I+ G++ +++V++Y + G L
Sbjct: 553 TLAAVLTVCSSHPSLPRG-------KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSL 602
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 168/377 (44%), Gaps = 16/377 (4%)
Query: 101 EKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXX 160
E + +FR+ S +V WNTII G +R +L M + T+
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 161 XXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGN 220
+ GK + RVI D F+ +++V++Y KCG +A + +P
Sbjct: 262 ASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIP-------- 312
Query: 221 SGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQ 280
+ +V W M+SGY + L+ F+ M H ++ TVT+VISAC ++ Q
Sbjct: 313 NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQ 372
Query: 281 MHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE-PNVFLWTSMISGCALHG 339
+HA++ K G +D+ V ++LI MYSKSG +D + +F +++ + MI+ +
Sbjct: 373 VHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSK 432
Query: 340 KGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHC 399
K +A LF ML +G+ +E + +++ + L ++ Y V + G
Sbjct: 433 KPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVG---- 488
Query: 400 TSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNI-EMGKWVSEMLLQVA 458
+S+ LY + G L E+ +F+ + W S +S + + E SEML
Sbjct: 489 SSLFTLYSKCGSLEESYK-LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT 547
Query: 459 PSDPEAYILLSNMCTSN 475
D + +C+S+
Sbjct: 548 SPDESTLAAVLTVCSSH 564
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 12/233 (5%)
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
D F+ SL+ Y G A+ + +P +V N M+SGY + +E+
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIP--------QPDVVSCNIMISGYKQHRLFEES 134
Query: 244 LKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
L+ F M H L + + +VISAC+ F + + K+G+ V S+LI
Sbjct: 135 LRFFSKM-HFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALID 193
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
++SK+ +DA+ +FR NV+ W ++I+G + LF M P+ T
Sbjct: 194 VFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYT 253
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET 415
+ V+ AC+ + L G + + C V CT++VDLY + G + E
Sbjct: 254 YSSVLAACASLEKLRFGKVV--QARVIKCGAEDVFVCTAIVDLYAKCGHMAEA 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 54/111 (48%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F LFR+M G + + +SS+ K + LG VHA++ + G+ + + +S+L +
Sbjct: 637 FLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTM 696
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK 113
Y K + + + F D++ W +I +Y G ++L ++ + K
Sbjct: 697 YSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEK 747
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 254 bits (649), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 239/465 (51%), Gaps = 13/465 (2%)
Query: 20 TLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELT 79
TL ++ K S+ ++ LGK +H +++ G ++ +++ + +L +Y A+++F
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 80 GEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLF 139
+ + V +N ++ L G +E +L +FR + KD VSW +I GL + G + A+E
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 140 CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG 199
M G + + F + GKQ+H +I ++ S+L++MYCKC
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 200 RTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDI 259
A + + ++ N +V W +MV GY G+ E+ +K F M D
Sbjct: 320 CLHYAKTVF-----DRMKQKN---VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
T+ ISACAN LE G Q H G V +SL+ +Y K G +DD+ +F +
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 320 INEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
+N + WT+M+S A G+ + LF+ M+ G+ P+ VT GVI+ACS GL+E+G
Sbjct: 432 MNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG 491
Query: 380 STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSV--WKSFLSS 437
YF++M Y I P + H + M+DL+ R+G L E FI NG+ W + LS+
Sbjct: 492 QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFI--NGMPFPPDAIGWTTLLSA 549
Query: 438 CRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
CR N+E+GKW +E L+++ P P Y LLS++ S +WD A
Sbjct: 550 CRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVA 594
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 195/428 (45%), Gaps = 35/428 (8%)
Query: 38 KGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGA 97
K +H ++R + L N+I+ Y K+ YA R+F+ + ++ +WN ++ AY A
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 98 GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVEN-GTEFSEVTFXXX 156
G + + F LP +D V+WN +I+G G A++ M+ + + VT
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 157 XXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKC-----------GRTDKAS 205
V LGKQ+HG+VI L + S L+ MY G D+ +
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 206 VILKDV------------PLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHE 253
V+ + L L R G V W +M+ G NG ++ ++ FR M +
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFR-GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 254 LAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDA 313
+D +V+ AC G + G+Q+HA I + + YVGS+LI MY K L A
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324
Query: 314 WVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHV 373
+F ++ + NV WT+M+ G G+ ++A +F M GI P+ T I+AC++V
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384
Query: 374 GLLEEGSTYFRMMKDVYCINPGVEH----CTSMVDLYGRAGCLIETKNFIFENGISHLTS 429
LEEGS + I G+ H S+V LYG+ G + ++ E + S
Sbjct: 385 SSLEEGSQFHGK-----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS 439
Query: 430 VWKSFLSS 437
W + +S+
Sbjct: 440 -WTAMVSA 446
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 160/359 (44%), Gaps = 63/359 (17%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
FREM+ +G +QY SV C + GK +HA ++R + + ++++D+Y K
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL 125
CK YA+ +F+ + +VV+W M+ Y G E+++ +F +
Sbjct: 318 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLD---------------- 361
Query: 126 IRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDN 185
M +G + T +E G Q HG+ IT L
Sbjct: 362 ---------------MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYV 406
Query: 186 FINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLK 245
+++SLV +Y KCG D ++ + ++ N V W +MVS Y G+ + ++
Sbjct: 407 TVSNSLVTLYGKCGDIDDSTRLFNEM--------NVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 246 TFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQM-------HAYIQKIGHRIDAYVGS 298
F MV D T+T VISAC+ AGL+E G++ + + IGH S
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY------S 512
Query: 299 SLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGK---GK-QASSLFE 349
+I ++S+SG L++A R IN P+ WT+++S C G GK A SL E
Sbjct: 513 CMIDLFSRSGRLEEA---MRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 119/326 (36%), Gaps = 83/326 (25%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+F +MQ G P+ YTL C+ +L+ G H + +G+ V + NS++ LY
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS----KDVVSWNT 120
KC + + RLF D V+W M+ AY G +++ +F + D V+
Sbjct: 418 KCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTG 477
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+I R G +VE G + +L +G V ++
Sbjct: 478 VISACSRAG-----------LVEKGQRY-----------------FKLMTSEYGIVPSIG 509
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
S +++++ + GR ++A + +P G W
Sbjct: 510 H------YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIG-------W------------- 543
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGR-QMHAYIQKIGHRIDAYVGSS 299
TT++SAC N G LE G+ + I+ H Y +
Sbjct: 544 ----------------------TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY--TL 579
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNV 325
L +Y+ G D + R + E NV
Sbjct: 580 LSSIYASKGKWDSVAQLRRGMREKNV 605
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/482 (30%), Positives = 246/482 (51%), Gaps = 47/482 (9%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F +F EMQ G + +T + K CS + L + K +H + + G+ +D+ + N+++D
Sbjct: 102 FFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDC 161
Query: 63 YLKCKAF--EYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
Y +C A +LFE E D V+WN M+ + AG++ + +F +P +D++SWNT
Sbjct: 162 YSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNT 221
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
++DG RC +A EL M E T V++
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNT----VSW--------------------------- 250
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
S++V Y K G + A V+ +PL + +V W +++GY G
Sbjct: 251 --------STMVMGYSKAGDMEMARVMFDKMPLP------AKNVVTWTIIIAGYAEKGLL 296
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
++ + MV D V ++++AC +GLL G ++H+ +++ +AYV ++L
Sbjct: 297 KEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNAL 356
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+ MY+K G+L A+ +F I + ++ W +M+ G +HG GK+A LF M +GI P++
Sbjct: 357 LDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDK 416
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
VTF+ V+ +C+H GL++EG YF M+ VY + P VEH +VDL GR G L E +
Sbjct: 417 VTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQ 476
Query: 421 ENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
+ +W + L +CR+H +++ K V + L+++ P DP Y LLSN+ + W+
Sbjct: 477 TMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEG 536
Query: 481 AA 482
A
Sbjct: 537 VA 538
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 10/190 (5%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
KQLH ++I L+ D I L+ C +T+ A + V + NS
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQV--------QEPNVHLCNS 87
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG 289
++ + N + F M D T ++ AC+ L + MH +I+K+G
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 290 HRIDAYVGSSLIHMYSKSGSL--DDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSL 347
D YV ++LI YS+ G L DA +F +++E + W SM+ G G+ + A L
Sbjct: 148 LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRL 207
Query: 348 FEGMLNQGIV 357
F+ M + ++
Sbjct: 208 FDEMPQRDLI 217
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 17/177 (9%)
Query: 266 ISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNV 325
+ CAN L +Q+HA I + D ++ LI S + A +F Q+ EPNV
Sbjct: 26 LPKCAN---LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 326 FLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSH------VGLLEEG 379
L S+I A + + QA +F M G+ + T+ ++ ACS V ++
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 380 STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCL-IETKNFIFENGISHLTSVWKSFL 435
+ D+Y N +++D Y R G L + +FE T W S L
Sbjct: 143 IEKLGLSSDIYVPN-------ALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSML 192
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 240/477 (50%), Gaps = 41/477 (8%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSA-EKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
LF ++ G P+QYT++SV K S+ + L L K VH ++ +D + +++D Y
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
+ + + AE LFE + D+V+WN ++
Sbjct: 463 SRNRCMKEAEILFERH--------------------------------NFDLVAWNAMMA 490
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
G + + L+L M + G + T + GKQ+H I +
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL 550
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
D +++S +++MY KCG A +P+ V W +M+SG + NG+ E
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPV--------PDDVAWTTMISGCIENGEEERA 602
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
F M + D T+ T+ A + LE GRQ+HA K+ D +VG+SL+ M
Sbjct: 603 FHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDM 662
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
Y+K GS+DDA+ +F++I N+ W +M+ G A HG+GK+ LF+ M + GI P++VTF
Sbjct: 663 YAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTF 722
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
+GV++ACSH GL+ E + R M Y I P +EH + + D GRAG + + +N I
Sbjct: 723 IGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
+ S++++ L++CR+ + E GK V+ LL++ P D AY+LLSNM + +WDE
Sbjct: 783 MEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDE 839
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 206/480 (42%), Gaps = 58/480 (12%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F LFR ++ ++ TLS + K C + + H + + G+D D + ++++
Sbjct: 129 AFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVN 188
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK-------- 113
+YLK + + LFE DVV WN+M++AYL G E+++D+ S
Sbjct: 189 IYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Query: 114 ------------------------DVVSWNTII---DGLIRCGYERRALELLFC---MVE 143
D S + II GL + + LL C MVE
Sbjct: 249 LRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVE 308
Query: 144 NGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDK 203
+ E +VTF + LG+Q+H + L L+ +++SL+ MYCK +
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368
Query: 204 ASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVT 263
A + ++ + ++ WNS+++G NG + + F ++ D T+T
Sbjct: 369 ARTVFDNM--------SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMT 420
Query: 264 TVISACANAGL-LEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE 322
+V+ A ++ L +Q+H + KI + D++V ++LI YS++ + +A ++F + N
Sbjct: 421 SVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHN- 479
Query: 323 PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTY 382
++ W +M++G G + LF M QG ++ T V C + + +G
Sbjct: 480 FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 383 FRMMKDVYCINPGVEH----CTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSC 438
Y I G + + ++D+Y + G + F F++ W + +S C
Sbjct: 540 H-----AYAIKSGYDLDLWVSSGILDMYVKCGDM-SAAQFAFDSIPVPDDVAWTTMISGC 593
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 168 LGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPW 227
LGK H R++T N + F+ ++L+ MY KCG A + +P +V W
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP--------DRDLVSW 108
Query: 228 NSMVSGYVWNGK-----YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMH 282
NS+++ Y + + + FR + ++ T++ ++ C ++G + H
Sbjct: 109 NSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFH 168
Query: 283 AYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGK 342
Y KIG D +V +L+++Y K G + + V+F ++ +V LW M+ G +
Sbjct: 169 GYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKE 228
Query: 343 QASSLFEGMLNQGIVPNEVTF 363
+A L + G+ PNE+T
Sbjct: 229 EAIDLSSAFHSSGLNPNEITL 249
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 44/217 (20%)
Query: 33 NLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIR 92
+L LGK HA +L + + L+N+++ +Y KC + YA R+F+
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFD--------------- 98
Query: 93 AYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIR---CGYE--RRALELLFCMVENGTE 147
+P +D+VSWN+I+ + C E ++A L + ++
Sbjct: 99 ----------------KMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVY 142
Query: 148 FSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVI 207
S +T V + HG + L+GD F+ +LV +Y K G+ + V+
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202
Query: 208 LKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+++P +V WN M+ Y+ G E+ +
Sbjct: 203 FEEMPYR--------DVVLWNLMLKAYLEMGFKEEAI 231
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 60/111 (54%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F +F +M+ G P+++T++++ K S L+ G+ +HA L+ D + S++D
Sbjct: 602 AFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVD 661
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS 112
+Y KC + + A LF+ ++ WN M+ G+ +++L +F+ + S
Sbjct: 662 MYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 145/507 (28%), Positives = 254/507 (50%), Gaps = 31/507 (6%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+F M + G P+ + L ++FK C+ ++GK +H +G+D D + S+ +Y+
Sbjct: 103 VFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYM 162
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DVVSWNT 120
+C A ++F+ + DVVT + ++ AY G +E+ + + + S ++VSWN
Sbjct: 163 RCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNG 222
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
I+ G R GY + A+ + + G +VT + +G+ +HG VI
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 282
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPL------NLLRTGNSG------------ 222
L D + S++++MY K G + + N TG S
Sbjct: 283 LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Query: 223 ---------GIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAG 273
+V W S+++G NGK + L+ FR M + T+ +++ AC N
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 274 LLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMIS 333
L GR H + ++ + +VGS+LI MY+K G ++ + ++F + N+ W S+++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMN 462
Query: 334 GCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCIN 393
G ++HGK K+ S+FE ++ + P+ ++F +++AC VGL +EG YF+MM + Y I
Sbjct: 463 GFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK 522
Query: 394 PGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEM 453
P +EH + MV+L GRAG L E + I E + VW + L+SCRL N+++ + +E
Sbjct: 523 PRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEK 582
Query: 454 LLQVAPSDPEAYILLSNMCTSNHRWDE 480
L + P +P Y+LLSN+ + W E
Sbjct: 583 LFHLEPENPGTYVLLSNIYAAKGMWTE 609
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 185/463 (39%), Gaps = 95/463 (20%)
Query: 41 HAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDV 100
HA +L++G D + ++ Y F A+ + + + + +++ +I A A
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 101 EKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXX 160
+S+ +F + S ++ + ++ L + E A ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKV----------------------- 134
Query: 161 XXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVIL-----KDVPL-- 213
GKQ+H L+ D F+ S+ MY +CGR A + KDV
Sbjct: 135 --------GKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCS 186
Query: 214 --------------------NLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHE 253
+ +G IV WN ++SG+ +G +++ + F+ + H
Sbjct: 187 ALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL 246
Query: 254 LAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGS---- 309
D TV++V+ + ++ +L GR +H Y+ K G D V S++I MY KSG
Sbjct: 247 GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGI 306
Query: 310 ---------------------------LDDAWVIF----RQINEPNVFLWTSMISGCALH 338
+D A +F Q E NV WTS+I+GCA +
Sbjct: 307 ISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQN 366
Query: 339 GKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH 398
GK +A LF M G+ PN VT ++ AC ++ L G + V+ ++ V
Sbjct: 367 GKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-NVHV 425
Query: 399 CTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH 441
++++D+Y + G I +F + W S ++ +H
Sbjct: 426 GSALIDMYAKCG-RINLSQIVFNMMPTKNLVCWNSLMNGFSMH 467
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 12/126 (9%)
Query: 280 QMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHG 339
Q HA I K G + D Y+ + LI YS +DA ++ + I +P ++ ++S+I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 340 KGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHC 399
Q+ +F M + G++P+ + C+ + + F++ K ++C++ C
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAEL-------SAFKVGKQIHCVS-----C 143
Query: 400 TSMVDL 405
S +D+
Sbjct: 144 VSGLDM 149
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/461 (31%), Positives = 242/461 (52%), Gaps = 40/461 (8%)
Query: 22 SSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGE 81
+++ K C+ K L G+ VHA +L++ D+V+ N++L++Y KC
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC--------------- 108
Query: 82 GDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCM 141
G +E++ +F +P +D V+W T+I G + AL M
Sbjct: 109 ----------------GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM 152
Query: 142 VENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRT 201
+ G +E T G QLHG + + + + S+L+++Y + G
Sbjct: 153 LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLM 212
Query: 202 DKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRT 261
D A ++ + L + N V WN++++G+ E L+ F+ M+ + +
Sbjct: 213 DDAQLVF-----DALESRND---VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS 264
Query: 262 VTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN 321
++ AC++ G LE G+ +HAY+ K G ++ A+ G++L+ MY+KSGS+ DA IF ++
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 322 EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGST 381
+ +V W S+++ A HG GK+A FE M GI PNE++FL V+ ACSH GLL+EG
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 382 YFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH 441
Y+ +MK I P H ++VDL GRAG L FI E I ++WK+ L++CR+H
Sbjct: 385 YYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Query: 442 KNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
KN E+G + +E + ++ P DP +++L N+ S RW++AA
Sbjct: 444 KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAA 484
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 156/339 (46%), Gaps = 48/339 (14%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
F +M G PN++TLSSV K +AE+ G +H + ++ G D++V + +++LDLY
Sbjct: 148 FFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYT 207
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
+ + A+ +F+ + V+WN +I + EK+L++F+ G
Sbjct: 208 RYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQ---------------G 252
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
++R G+ S ++ +E GK +H +I
Sbjct: 253 MLRDGFRP----------------SHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
F ++L++MY K G A I + +V WNS+++ Y +G ++ +
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLA--------KRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 245 KTFRSMVHELAIVDIR----TVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
F E+ V IR + +V++AC+++GLL+ G + ++K G +A+ ++
Sbjct: 349 WWFE----EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTV 404
Query: 301 IHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
+ + ++G L+ A ++ EP +W ++++ C +H
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 10/184 (5%)
Query: 257 VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVI 316
D R T++ C LL GR +HA+I + R D +G++L++MY+K GSL++A +
Sbjct: 58 ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 317 FRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLL 376
F ++ + + WT++ISG + H + A F ML G PNE T VI A +
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA---AE 174
Query: 377 EEGSTYFRMMKDVYCINPG----VEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWK 432
G ++ +C+ G V ++++DLY R G L++ +F+ S W
Sbjct: 175 RRGCCGHQLHG--FCVKCGFDSNVHVGSALLDLYTRYG-LMDDAQLVFDALESRNDVSWN 231
Query: 433 SFLS 436
+ ++
Sbjct: 232 ALIA 235
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
LF+ M G P+ ++ +S+F CS+ L+ GK VHA+M+++G N++LD
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAG 98
+Y K + A ++F+ + DVV+WN ++ AY G
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 342
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/479 (30%), Positives = 237/479 (49%), Gaps = 40/479 (8%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
F +M G +++TLSSVF C+ +NL LGK +H+W +R+G+ DV S++D+Y
Sbjct: 256 FFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYA 313
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC A G V+ +F + V+SW +I G
Sbjct: 314 KCSA----------------------------DGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 125 LIR-CGYERRALELLFCMVENG-TEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
++ C A+ L M+ G E + TF +GKQ+ G+ L
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLA 405
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
++ + +S++ M+ K R + A + + + +V +N+ + G N +E
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESL--------SEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
K + V T +++S AN G + G Q+H+ + K+G + V ++LI
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALIS 517
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MYSK GS+D A +F + NV WTSMI+G A HG + F M+ +G+ PNEVT
Sbjct: 518 MYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVT 577
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
++ +++ACSHVGL+ EG +F M + + I P +EH MVDL RAG L + FI
Sbjct: 578 YVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTM 637
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
VW++FL +CR+H N E+GK + +L++ P++P AYI LSN+ +W+E+
Sbjct: 638 PFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEES 696
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 181/398 (45%), Gaps = 49/398 (12%)
Query: 4 SLFREMQAKGAC-PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+LF EM +G PN +T SS FK C + ++GK V + G+ ++ + NS++ +
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISM 417
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
++K E A+R FE +L K++VS+NT +
Sbjct: 418 FVKSDRMEDAQRAFE-------------------------------SLSEKNLVSYNTFL 446
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
DG R +A +LL + E S TF + G+Q+H +V+ L L+
Sbjct: 447 DGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLS 506
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ + ++L+ MY KCG D AS + N + N ++ W SM++G+ +G
Sbjct: 507 CNQPVCNALISMYSKCGSIDTASRV-----FNFMENRN---VISWTSMITGFAKHGFAIR 558
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFG-RQMHAYIQ--KIGHRIDAYVGSS 299
L+TF M+ E + T ++SAC++ GL+ G R ++ + KI +++ Y +
Sbjct: 559 VLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY--AC 616
Query: 300 LIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
++ + ++G L DA+ + + +V +W + + C +H + +L + P
Sbjct: 617 MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--LDP 674
Query: 359 NE-VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPG 395
NE ++ + N + G EE + R MK+ + G
Sbjct: 675 NEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEG 712
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 155/344 (45%), Gaps = 27/344 (7%)
Query: 126 IRCGYERRALELLFCMVENGTE-FSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+ G R A+ L M +G VTF LGK +H R+I + D
Sbjct: 37 LNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPD 96
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ + +SL+ +Y K G + KA +DV + R G +V W++M++ Y NG+ D +
Sbjct: 97 SVLYNSLISLYSKSGDSAKA----EDVFETMRRFGKRD-VVSWSAMMACYGNNGRELDAI 151
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGH-RIDAYVGSSLIHM 303
K F + + + T VI AC+N+ + GR ++ K GH D VG SLI M
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 304 YSK-SGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
+ K S ++A+ +F +++E NV WT MI+ C G ++A F M+ G ++ T
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 363 FLGVINACSHVGLLEEGSTYFR------MMKDVYCINPGVEHCTSMVDLYGR--AGCLIE 414
V +AC+ + L G ++ DV C S+VD+Y + A ++
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC---------SLVDMYAKCSADGSVD 322
Query: 415 TKNFIFENGISHLTSVWKSFLSSCRLHKNI--EMGKWVSEMLLQ 456
+F+ H W + ++ + N+ E SEM+ Q
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 204/477 (42%), Gaps = 51/477 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNG-VDADVVLVNSILDLY 63
+F E G PN Y ++V + CS + +G+ ++++ G ++DV + S++D++
Sbjct: 153 VFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMF 212
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
+K G E + +F + +VV+W +I
Sbjct: 213 VK------------------------------GENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
++ G+ R A+ MV +G E + T + LGKQLH I L
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD 302
Query: 184 DNFINSSLVEMYCKC---GRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
D + SLV+MY KC G D + + ++ W ++++GY+ N
Sbjct: 303 D--VECSLVDMYAKCSADGSVDDCRKVFDRM--------EDHSVMSWTALITGYMKNCNL 352
Query: 241 E-DCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
+ + F M+ + + + T ++ AC N G+Q+ K G ++ V +
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVAN 412
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
S+I M+ KS ++DA F ++E N+ + + + G + +QA L + + +
Sbjct: 413 SVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV 472
Query: 359 NEVTFLGVINACSHVGLLEEGST-YFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKN 417
+ TF +++ ++VG + +G + +++K N V C +++ +Y + G I+T +
Sbjct: 473 SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPV--CNALISMYSKCGS-IDTAS 529
Query: 418 FIFENGISHLTSVWKSFLSSCRLHK-NIEMGKWVSEMLLQVAPSDPEAYILLSNMCT 473
+F + W S ++ H I + + ++M+ + + Y+ + + C+
Sbjct: 530 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 165/378 (43%), Gaps = 56/378 (14%)
Query: 9 MQAKGACP-NQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCK 67
M G P + T SS+ K C ++ +LGK VHA
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHA------------------------- 86
Query: 68 AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMF---RNLPSKDVVSWNTIIDG 124
RL E E D V +N +I Y +GD K+ D+F R +DVVSW+ ++
Sbjct: 87 ------RLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMAC 140
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI-TLALNG 183
G E A+++ +E G ++ + V +G+ G ++ T
Sbjct: 141 YGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
D + SL++M+ K + + + + D L +V W M++ + G +
Sbjct: 201 DVCVGCSLIDMFVKGENSFENAYKVFDKMSEL-------NVVTWTLMITRCMQMGFPREA 253
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
++ F MV D T+++V SACA L G+Q+H++ + G D V SL+ M
Sbjct: 254 IRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDM 311
Query: 304 YSK---SGSLDDAWVIFRQINEPNVFLWTSMISG----CALHGKGKQASSLFEGMLNQGI 356
Y+K GS+DD +F ++ + +V WT++I+G C L +A +LF M+ QG
Sbjct: 312 YAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL---ATEAINLFSEMITQGH 368
Query: 357 V-PNEVTFLGVINACSHV 373
V PN TF AC ++
Sbjct: 369 VEPNHFTFSSAFKACGNL 386
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/495 (29%), Positives = 251/495 (50%), Gaps = 21/495 (4%)
Query: 1 MVFSLFREMQAKGAC-PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSI 59
+ +F M + C P+ TL +V C++ LGK +H + + + + ++ + N +
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 60 LDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DV 115
+D+Y KC + A +F DVV+WN M+ Y G E ++ +F + + DV
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
V+W+ I G + G AL + M+ +G + +EVT + GK++H
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 176 VITLALN------GD-NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
I ++ GD N + + L++MY KC + D A + + + +V W
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL------SPKERDVVTWT 444
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHE--LAIVDIRTVTTVISACANAGLLEFGRQMHAY-I 285
M+ GY +G L+ M E + T++ + ACA+ L G+Q+HAY +
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQAS 345
+ + + +V + LI MY+K GS+ DA ++F + N WTS+++G +HG G++A
Sbjct: 505 RNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEAL 564
Query: 346 SLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDL 405
+F+ M G + VT L V+ ACSH G++++G YF MK V+ ++PG EH +VDL
Sbjct: 565 GIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDL 624
Query: 406 YGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAY 465
GRAG L I E + VW +FLS CR+H +E+G++ +E + ++A + +Y
Sbjct: 625 LGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSY 684
Query: 466 ILLSNMCTSNHRWDE 480
LLSN+ + RW +
Sbjct: 685 TLLSNLYANAGRWKD 699
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 209/486 (43%), Gaps = 91/486 (18%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF M + P+ YT VFK C +++ G+ HA L G ++V + N+++ +Y
Sbjct: 114 LFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYS 173
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
+C++ A ++F+ ++ W DVVSWN+II+
Sbjct: 174 RCRSLSDARKVFD-----EMSVW--------------------------DVVSWNSIIES 202
Query: 125 LIRCGYERRALELLFCMV-ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
+ G + ALE+ M E G +T LGKQLH +T +
Sbjct: 203 YAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ 262
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ F+ + LV+MY KCG D+A+ + ++ + +V WN+MV+GY G++ED
Sbjct: 263 NMFVGNCLVDMYAKCGMMDEANTVFSNMSVK--------DVVSWNAMVAGYSQIGRFEDA 314
Query: 244 LKTFRSMVHELAIVDI-----------------------------------RTVTTVISA 268
++ F M E +D+ T+ +V+S
Sbjct: 315 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374
Query: 269 CANAGLLEFGRQMHAY-------IQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN 321
CA+ G L G+++H Y ++K GH + V + LI MY+K +D A +F ++
Sbjct: 375 CASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 434
Query: 322 --EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG--IVPNEVTFLGVINACSHVGLLE 377
E +V WT MI G + HG +A L M + PN T + AC+ + L
Sbjct: 435 PKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALR 494
Query: 378 EGSTY--FRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFL 435
G + + + V +C ++D+Y + G + + + +F+N ++ W S +
Sbjct: 495 IGKQIHAYALRNQQNAVPLFVSNC--LIDMYAKCGSISDAR-LVFDNMMAKNEVTWTSLM 551
Query: 436 SSCRLH 441
+ +H
Sbjct: 552 TGYGMH 557
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 24/261 (9%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
K +H ++++ + N + S L+ Y G A +L+ P + G+ WNS
Sbjct: 45 KLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFP------PSDAGVYHWNS 97
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHELA-IVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
++ Y NG CL F ++H L+ D T V AC + G HA
Sbjct: 98 LIRSYGDNGCANKCLYLF-GLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
G + +VG++L+ MYS+ SL DA +F +++ +V W S+I A GK K A +F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 349 EGMLNQ-GIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSM----- 402
M N+ G P+ +T + V+ C+ +G G K ++C E +M
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLG-------KQLHCFAVTSEMIQNMFVGNC 269
Query: 403 -VDLYGRAGCLIETKNFIFEN 422
VD+Y + G +++ N +F N
Sbjct: 270 LVDMYAKCG-MMDEANTVFSN 289
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 237/483 (49%), Gaps = 22/483 (4%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
++ ++ G +Q++ + K S L G +H + D + +D+Y
Sbjct: 98 FYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYA 157
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
C YA +F+ DVVTWN MI Y G V+++ +F + +V+ I+
Sbjct: 158 SCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCN 217
Query: 125 LIR-CG------YERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
++ CG Y R E L +EN +++ ++ ++
Sbjct: 218 IVSACGRTGNMRYNRAIYEFL---IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
L F+++++V Y KCGR D A VI +V W +M+S YV +
Sbjct: 275 VRNL----FVSTAMVSGYSKCGRLDDAQVIFDQT--------EKKDLVCWTTMISAYVES 322
Query: 238 GKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVG 297
++ L+ F M D+ ++ +VISACAN G+L+ + +H+ I G + +
Sbjct: 323 DYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSIN 382
Query: 298 SSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV 357
++LI+MY+K G LD +F ++ NV W+SMI+ ++HG+ A SLF M + +
Sbjct: 383 NALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVE 442
Query: 358 PNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKN 417
PNEVTF+GV+ CSH GL+EEG F M D Y I P +EH MVDL+GRA L E
Sbjct: 443 PNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALE 502
Query: 418 FIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHR 477
I ++ +W S +S+CR+H +E+GK+ ++ +L++ P A +L+SN+ R
Sbjct: 503 VIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQR 562
Query: 478 WDE 480
W++
Sbjct: 563 WED 565
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 153/342 (44%), Gaps = 14/342 (4%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F LF EM+ P++ L ++ C N++ + ++ +++ N V D L+ +++ +
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y + A F ++ M+ Y G ++ + +F KD+V W T+I
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 316
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
+ Y + AL + M +G + V+ ++ K +H + L
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 376
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ IN++L+ MY KCG D + + +P +V W+SM++ +G+ D
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMP--------RRNVVSWSSMINALSMHGEASD 428
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ---KIGHRIDAYVGSS 299
L F M E + T V+ C+++GL+E G+++ A + I +++ Y
Sbjct: 429 ALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHY--GC 486
Query: 300 LIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGK 340
++ ++ ++ L +A + + NV +W S++S C +HG+
Sbjct: 487 MVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE 528
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 237/471 (50%), Gaps = 44/471 (9%)
Query: 9 MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKA 68
+Q+ G + T S + KCC + + + G + + NG + LVN ++++Y+K
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 69 FEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRC 128
A +LF+ +P ++V+SW T+I +C
Sbjct: 112 LNDAHQLFD-------------------------------QMPQRNVISWTTMISAYSKC 140
Query: 129 GYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFIN 188
++ALELL M+ + + T+ V + LH +I L D F+
Sbjct: 141 KIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVR 197
Query: 189 SSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFR 248
S+L++++ K G + A + ++ +G + WNS++ G+ N + + L+ F+
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEMV--------TGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 249 SMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSG 308
M I + T+T+V+ AC LLE G Q H +I K D + ++L+ MY K G
Sbjct: 250 RMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ--DLILNNALVDMYCKCG 307
Query: 309 SLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
SL+DA +F Q+ E +V W++MISG A +G ++A LFE M + G PN +T +GV+
Sbjct: 308 SLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLF 367
Query: 369 ACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLT 428
ACSH GLLE+G YFR MK +Y I+P EH M+DL G+AG L + + E
Sbjct: 368 ACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDA 427
Query: 429 SVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
W++ L +CR+ +N+ + ++ ++ ++ + P D Y LLSN+ ++ +WD
Sbjct: 428 VTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWD 478
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 33/153 (21%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ LF+ M+ G Q TL+SV + C+ L+LG H +++ D D++L N+++
Sbjct: 243 VALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALV 300
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
D+Y KC G +E +L +F + +DV++W+T
Sbjct: 301 DMYCKC-------------------------------GSLEDALRVFNQMKERDVITWST 329
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTF 153
+I GL + GY + AL+L M +GT+ + +T
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKPNYITI 362
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 235/478 (49%), Gaps = 40/478 (8%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+ F EM + G P+ T SS+ S +NL+ K +H +++R+ + D+ L ++++D
Sbjct: 325 LTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDA 384
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC+ A+ ++F S DVV + +I
Sbjct: 385 YFKCRGVSMAQ-------------------------------NIFSQCNSVDVVVFTAMI 413
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G + G +LE+ +V+ +E+T ++LG++LHG +I +
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD 473
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
I ++++MY KCGR + A I + + + IV WNSM++ +
Sbjct: 474 NRCNIGCAVIDMYAKCGRMNLAYEIFERL--------SKRDIVSWNSMITRCAQSDNPSA 525
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
+ FR M D +++ +SACAN FG+ +H ++ K D Y S+LI
Sbjct: 526 AIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLID 585
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQ-GIVPNEV 361
MY+K G+L A +F+ + E N+ W S+I+ C HGK K + LF M+ + GI P+++
Sbjct: 586 MYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQI 645
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
TFL +I++C HVG ++EG +FR M + Y I P EH +VDL+GRAG L E +
Sbjct: 646 TFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKS 705
Query: 422 NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
VW + L +CRLHKN+E+ + S L+ + PS+ Y+L+SN + W+
Sbjct: 706 MPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWE 763
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 200/447 (44%), Gaps = 53/447 (11%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+ + +M G P+ T + K C A KN + G+D L +++ L
Sbjct: 123 LAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK------------GID---FLSDTVSSL 167
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
+ C F + +I+AYL G ++ +F + KD V WN ++
Sbjct: 168 GMDCNEFVASS----------------LIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVML 211
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
+G +CG ++ M + + VTF ++LG QLHG V+ ++
Sbjct: 212 NGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD 271
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ I +SL+ MY KCGR D AS L R + V WN M+SGYV +G E+
Sbjct: 272 FEGSIKNSLLSMYSKCGRFDDAS--------KLFRMMSRADTVTWNCMISGYVQSGLMEE 323
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
L F M+ + D T ++++ + + LE+ +Q+H YI + +D ++ S+LI
Sbjct: 324 SLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALID 383
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
Y K + A IF Q N +V ++T+MISG +G + +F ++ I PNE+T
Sbjct: 384 AYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEIT 443
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDV--YCINPGVEH-CT---SMVDLYGRAGCLIETK 416
+ ++ +G+L ++ +++ + I G ++ C +++D+Y + G +
Sbjct: 444 LVSILPV---IGIL----LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCG-RMNLA 495
Query: 417 NFIFENGISHLTSVWKSFLSSCRLHKN 443
IFE W S ++ C N
Sbjct: 496 YEIFERLSKRDIVSWNSMITRCAQSDN 522
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 155/357 (43%), Gaps = 37/357 (10%)
Query: 21 LSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTG 80
LS + + CS L+ GK VHA+++ N + D IL +Y C +F ++F
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF---- 93
Query: 81 EGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFC 140
LD+ R+ + WN+II +R G +AL F
Sbjct: 94 ---------------------YRLDLRRS----SIRPWNSIISSFVRNGLLNQALAFYFK 128
Query: 141 MVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGR 200
M+ G TF + L V +L ++ + F+ SSL++ Y + G+
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGK 188
Query: 201 TDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIR 260
D VP L V WN M++GY G + +K F M + +
Sbjct: 189 ID--------VPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAV 240
Query: 261 TVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQI 320
T V+S CA+ L++ G Q+H + G + + +SL+ MYSK G DDA +FR +
Sbjct: 241 TFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
Query: 321 NEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLE 377
+ + W MISG G +++ + F M++ G++P+ +TF ++ + S LE
Sbjct: 301 SRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLE 357
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
R ++ ++ AC+N LL G+Q+HA++ D+Y ++ MY+ GS D +F +
Sbjct: 36 RRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYR 95
Query: 320 IN--EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINAC 370
++ ++ W S+IS +G QA + + ML G+ P+ TF ++ AC
Sbjct: 96 LDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/424 (33%), Positives = 212/424 (50%), Gaps = 40/424 (9%)
Query: 99 DVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERR--ALELLFCMVENG-TEFSEVTFXX 155
D++ + +F +P ++ SWNTII G ++ A+ L + M+ + E + TF
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 156 XXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVIL------K 209
++ GKQ+HG + GD F+ S+LV MY CG A V+ K
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 210 DVPLNLLRTGNSG-------------------------------GIVPWNSMVSGYVWNG 238
D+ + R G +V WN+M+SGY NG
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 239 KYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
++D ++ FR M + T+ +V+ A + G LE G +H Y + G RID +GS
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
+LI MYSK G ++ A +F ++ NV W++MI+G A+HG+ A F M G+ P
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
++V ++ ++ ACSH GL+EEG YF M V + P +EH MVDL GR+G L E + F
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRW 478
I I +WK+ L +CR+ N+EMGK V+ +L+ + P D AY+ LSNM S W
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493
Query: 479 DEAA 482
E +
Sbjct: 494 SEVS 497
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 178/374 (47%), Gaps = 32/374 (8%)
Query: 1 MVFSLFREMQAKGAC-PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSI 59
+ +LF EM + PN++T SV K C+ +Q GK +H L+ G D +++++
Sbjct: 110 IAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNL 169
Query: 60 LDLYLKCKAFEYAERLF--------------ELTGEGDVVTWNIMIRAYLGAGDVEKSLD 105
+ +Y+ C + A LF +G++V WN+MI Y+ GD + +
Sbjct: 170 VRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARM 229
Query: 106 MFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXX 165
+F + + VVSWNT+I G G+ + A+E+ M + + VT
Sbjct: 230 LFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGS 289
Query: 166 VELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIV 225
+ELG+ LH + D+ + S+L++MY KCG +KA + + +P ++
Sbjct: 290 LELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE--------NVI 341
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY- 284
W++M++G+ +G+ D + F M +++AC++ GL+E GR+ +
Sbjct: 342 TWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQM 401
Query: 285 --IQKIGHRIDAYVGSSLIHMYSKSGSLDDA-WVIFRQINEPNVFLWTSMISGCALHGK- 340
+ + RI+ Y ++ + +SG LD+A I +P+ +W +++ C + G
Sbjct: 402 VSVDGLEPRIEHY--GCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNV 459
Query: 341 --GKQASSLFEGML 352
GK+ +++ M+
Sbjct: 460 EMGKRVANILMDMV 473
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 280 QMHAYIQKIGHRIDAYVGSSLIHMYSKSG----SLDDAWVIFRQINEPNVFLWTSMISGC 335
Q+HA K G D + ++ + S LD A IF Q+ + N F W ++I G
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 336 ALHGKGKQ--ASSLF-EGMLNQGIVPNEVTFLGVINACSHVGLLEEGS 380
+ + K A +LF E M ++ + PN TF V+ AC+ G ++EG
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGK 148
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/481 (30%), Positives = 243/481 (50%), Gaps = 50/481 (10%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
VF+LF + +G+ + Y ++V +A + LG+ +H ++NG+ V L N+++
Sbjct: 206 VFNLFLREKEEGS-DSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y KC++ A ++F+ +G+ ++ ++W+ +
Sbjct: 265 MYSKCESLNEACKMFDSSGD-------------------------------RNSITWSAM 293
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
+ G + G A++L M G + SE T +E GKQLH ++ L
Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF 353
Query: 182 NGDNFINSSLVEMYCKCG-----RTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
F ++LV+MY K G R + +DV L W S++SGYV
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVAL-------------WTSLISGYVQ 400
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
N E+ L +R M I + T+ +V+ AC++ LE G+Q+H + K G ++ +
Sbjct: 401 NSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPI 460
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
GS+L MYSK GSL+D ++FR+ +V W +MISG + +G+G +A LFE ML +G+
Sbjct: 461 GSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGM 520
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
P++VTF+ +I+ACSH G +E G YF MM D ++P V+H MVDL RAG L E K
Sbjct: 521 EPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAK 580
Query: 417 NFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNH 476
FI I H +W+ LS+C+ H E+G + E L+ + + Y+ LS + T+
Sbjct: 581 EFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALG 640
Query: 477 R 477
R
Sbjct: 641 R 641
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 222/476 (46%), Gaps = 46/476 (9%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V LFREM+A+ PN YTL+ +FK S+ ++ +G+ HA +++ D+ + S++
Sbjct: 102 VMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVG 161
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y K AG VE L +F +P ++ +W+T+
Sbjct: 162 MYCK-------------------------------AGLVEDGLKVFAYMPERNTYTWSTM 190
Query: 122 IDGLIRCGYERRALEL--LFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
+ G G A+++ LF + S+ F V LG+Q+H I
Sbjct: 191 VSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKN 250
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
L G ++++LV MY KC ++A + +G+ I W++MV+GY NG+
Sbjct: 251 GLLGFVALSNALVTMYSKCESLNEACKMFDS-------SGDRNSIT-WSAMVTGYSQNGE 302
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
+ +K F M T+ V++AC++ LE G+Q+H+++ K+G + ++
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTA 362
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
L+ MY+K+G L DA F + E +V LWTS+ISG + ++A L+ M GI+PN
Sbjct: 363 LVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPN 422
Query: 360 EVTFLGVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
+ T V+ ACS + LE G + +K + + V +++ +Y + G L E N
Sbjct: 423 DPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE--VPIGSALSTMYSKCGSL-EDGNL 479
Query: 419 IFENGISHLTSVWKSFLSSCRLH-KNIEMGKWVSEMLLQVAPSDPEAYILLSNMCT 473
+F + W + +S + + E + EML + D ++ + + C+
Sbjct: 480 VFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACS 535
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 197/430 (45%), Gaps = 54/430 (12%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
P+ TL S ++NL G+ VH ++R G + N +++ Y KC A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKS---LDMFRNLPSKDVVSWNTIIDGLIRCGYER 132
F DVV+WN +I Y G + S + +FR + ++D++ + G+ +
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK----- 126
Query: 133 RALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLV 192
E+ + S V G+Q H V+ ++ GD ++++SLV
Sbjct: 127 ---------AESSLQSSTV-----------------GRQAHALVVKMSSFGDIYVDTSLV 160
Query: 193 EMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVH 252
MYCK G + + +P T W++MVSGY G+ E+ +K F +
Sbjct: 161 GMYCKAGLVEDGLKVFAYMPERNTYT--------WSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 253 EL--AIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSL 310
E T V+S+ A + GRQ+H K G + ++L+ MYSK SL
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 311 DDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINAC 370
++A +F + N W++M++G + +G+ +A LF M + GI P+E T +GV+NAC
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 371 SHVGLLEEGSTYFRMMKDVYCINPGVEH----CTSMVDLYGRAGCLIETKNFIFENGISH 426
S + LEEG + + G E T++VD+Y +AGCL + + F+
Sbjct: 333 SDICYLEEGKQLHSFL-----LKLGFERHLFATTALVDMYAKAGCLADARKG-FDCLQER 386
Query: 427 LTSVWKSFLS 436
++W S +S
Sbjct: 387 DVALWTSLIS 396
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 218/414 (52%), Gaps = 9/414 (2%)
Query: 70 EYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCG 129
+ AERLF D WN M+ YL G V+ +L +F+ +P K+V+SW T+I GL +
Sbjct: 145 DQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNE 204
Query: 130 YERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINS 189
AL+L M+ + + F +G Q+HG +I L + ++++
Sbjct: 205 RSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSA 264
Query: 190 SLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRS 249
SL+ Y C R + + + + W +++SGY N K+ED L F
Sbjct: 265 SLITFYANCKRIGDSRKVFDEKVHE--------QVAVWTALLSGYSLNKKHEDALSIFSG 316
Query: 250 MVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGS 309
M+ + + T + +++C+ G L++G++MH K+G DA+VG+SL+ MYS SG+
Sbjct: 317 MLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGN 376
Query: 310 LDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINA 369
++DA +F +I + ++ W S+I GCA HG+GK A +F M+ P+E+TF G+++A
Sbjct: 377 VNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSA 436
Query: 370 CSHVGLLEEGSTYFRMMKD-VYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLT 428
CSH G LE+G F M + I+ ++H T MVD+ GR G L E + I +
Sbjct: 437 CSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNE 496
Query: 429 SVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
VW + LS+CR+H +++ G+ + + + AY+LLSN+ S RW +
Sbjct: 497 MVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVS 550
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 190/422 (45%), Gaps = 43/422 (10%)
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
+L + + A +F V + MI Y + + +L++F +P +DVVSWN++I
Sbjct: 45 HLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMI 104
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G + CG A++L M E S V++ V+ ++L ++
Sbjct: 105 SGCVECGDMNTAVKLFDEMPER----SVVSWTAMVNGCFRSGKVDQAERLFYQMPV---- 156
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
D +S+V Y + G+ D A + K +P ++ W +M+ G N + +
Sbjct: 157 KDTAAWNSMVHGYLQFGKVDDALKLFKQMP--------GKNVISWTTMICGLDQNERSGE 208
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
L F++M+ R T VI+ACANA G Q+H I K+G + YV +SLI
Sbjct: 209 ALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLIT 268
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
Y+ + D+ +F + V +WT+++SG +L+ K + A S+F GML I+PN+ T
Sbjct: 269 FYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQST 328
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH----CTSMVDLYGRAGCLIETKNF 418
F +N+CS +G L+ G + M V + G+E S+V +Y +G + + +
Sbjct: 329 FASGLNSCSALGTLDWG----KEMHGV-AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSV 383
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRW 478
+ + S W S + C H GKW A+++ M N
Sbjct: 384 FIKIFKKSIVS-WNSIIVGCAQHGR---GKW--------------AFVIFGQMIRLNKEP 425
Query: 479 DE 480
DE
Sbjct: 426 DE 427
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/474 (31%), Positives = 234/474 (49%), Gaps = 41/474 (8%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKN---LQLGKGVHAWMLRNGVDADVVLVNSI 59
+L +M G Y L SV K C N ++ G +H + + G++ D+V+ ++
Sbjct: 234 LNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTAL 293
Query: 60 LDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN 119
LD+Y K + + A +LF L +VVT+N MI +L +D + S +
Sbjct: 294 LDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL-------QMDEITDEASSE----- 341
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
A +L M G E S TF +E G+Q+H +
Sbjct: 342 --------------AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKN 387
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
D FI S+L+E+Y G T+ + + + I W SM+ +V N +
Sbjct: 388 NFQSDEFIGSALIELYALMGSTEDG--------MQCFASTSKQDIASWTSMIDCHVQNEQ 439
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY--VG 297
E FR + + TV+ ++SACA+ L G Q+ Y K G IDA+ V
Sbjct: 440 LESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSG--IDAFTSVK 497
Query: 298 SSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV 357
+S I MY+KSG++ A +F ++ P+V +++MIS A HG +A ++FE M GI
Sbjct: 498 TSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIK 557
Query: 358 PNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKN 417
PN+ FLGV+ AC H GL+ +G YF+ MK+ Y INP +H T +VDL GR G L + +N
Sbjct: 558 PNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAEN 617
Query: 418 FIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNM 471
I +G W++ LSSCR++K+ +GK V+E L+++ P +Y+LL N+
Sbjct: 618 LILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNI 671
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 185/415 (44%), Gaps = 50/415 (12%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF E + +++T + C +L LG+ +H ++ NG+ V L+N ++D+Y
Sbjct: 135 LFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYS 194
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC + A LF+ E D V+WN +I Y+ G E+ L++ + +D ++ T G
Sbjct: 195 KCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKM-HRDGLNLTTYALG 253
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+ L C + F +E G +H L + D
Sbjct: 254 SV----------LKACCINLNEGF-----------------IEKGMAIHCYTAKLGMEFD 286
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED-- 242
+ ++L++MY K G +A + +P S +V +N+M+SG++ + D
Sbjct: 287 IVVRTALLDMYAKNGSLKEAIKLFSLMP--------SKNVVTYNAMISGFLQMDEITDEA 338
Query: 243 ---CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
K F M T + V+ AC+ A LE+GRQ+HA I K + D ++GS+
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSA 398
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
LI +Y+ GS +D F ++ ++ WTSMI + + + A LF + + I P
Sbjct: 399 LIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPE 458
Query: 360 EVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSM----VDLYGRAG 410
E T +++AC+ L G Y I G++ TS+ + +Y ++G
Sbjct: 459 EYTVSLMMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMYAKSG 508
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 181/378 (47%), Gaps = 51/378 (13%)
Query: 24 VFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGD 83
+F+ + ++ LGK H M+++ ++ + L+N++L++Y KC+ +A +LF+
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFD------ 106
Query: 84 VVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVE 143
+P ++++S+N++I G + G+ +A+EL E
Sbjct: 107 -------------------------RMPERNIISFNSLISGYTQMGFYEQAMELFLEARE 141
Query: 144 NGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDK 203
+ + T+ ++LG+ LHG V+ L+ F+ + L++MY KCG+ D+
Sbjct: 142 ANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQ 201
Query: 204 ASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVT 263
A ++L + V WNS++SGYV G E+ L M + + +
Sbjct: 202 A--------MSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALG 253
Query: 264 TVISACA---NAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQI 320
+V+ AC N G +E G +H Y K+G D V ++L+ MY+K+GSL +A +F +
Sbjct: 254 SVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLM 313
Query: 321 NEPNVFLWTSMISG-CALHGKGKQASS----LFEGMLNQGIVPNEVTFLGVINACSHVGL 375
NV + +MISG + +ASS LF M +G+ P+ TF V+ ACS
Sbjct: 314 PSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKT 373
Query: 376 LEEGSTYFRMMKDVYCIN 393
LE G R + + C N
Sbjct: 374 LEYG----RQIHALICKN 387
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 113/257 (43%), Gaps = 20/257 (7%)
Query: 166 VELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIV 225
V LGK HG +I +LN ++ ++L+ MYCKC A + +P I+
Sbjct: 63 VVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP--------ERNII 114
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI 285
+NS++SGY G YE ++ F +D T + C L+ G +H +
Sbjct: 115 SFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLV 174
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQAS 345
G ++ + LI MYSK G LD A +F + +E + W S+ISG G ++
Sbjct: 175 VVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPL 234
Query: 346 SLFEGMLNQGIVPNEVTFLGVINACS---HVGLLEEGSTYFRMMKDVYCINPGVEH---- 398
+L M G+ V+ AC + G +E+G M Y G+E
Sbjct: 235 NLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG-----MAIHCYTAKLGMEFDIVV 289
Query: 399 CTSMVDLYGRAGCLIET 415
T+++D+Y + G L E
Sbjct: 290 RTALLDMYAKNGSLKEA 306
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/551 (27%), Positives = 259/551 (47%), Gaps = 78/551 (14%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V LF +M++ G + +T +S+ C+A +L++G H+ +++ + ++ + N+++D
Sbjct: 412 VMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVD 471
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP---------- 111
+Y KC A E A ++FE + D VTWN +I +Y+ + ++ D+F+ +
Sbjct: 472 MYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGAC 531
Query: 112 -----------------------------SKDVVSWNTIIDGLIRC-------------- 128
+D+ + +++ID +C
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 129 ------------GYERRALE----LLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
GY + LE L M+ G SE+TF + LG Q
Sbjct: 592 EWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQF 651
Query: 173 HGRVITLALNGD-NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMV 231
HG++ + + ++ SL+ MY +A + ++ + IV W M+
Sbjct: 652 HGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL-------SSPKSIVLWTGMM 704
Query: 232 SGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR 291
SG+ NG YE+ LK ++ M H+ + D T TV+ C+ L GR +H+ I + H
Sbjct: 705 SGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD 764
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQI-NEPNVFLWTSMISGCALHGKGKQASSLFEG 350
+D ++LI MY+K G + + +F ++ NV W S+I+G A +G + A +F+
Sbjct: 765 LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDS 824
Query: 351 MLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAG 410
M I+P+E+TFLGV+ ACSH G + +G F MM Y I V+H MVDL GR G
Sbjct: 825 MRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWG 884
Query: 411 CLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSN 470
L E +FI + +W S L +CR+H + G+ +E L+++ P + AY+LLSN
Sbjct: 885 YLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSN 944
Query: 471 MCTSNHRWDEA 481
+ S W++A
Sbjct: 945 IYASQGCWEKA 955
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 204/443 (46%), Gaps = 56/443 (12%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
PN++T S V C+ E N++ G+ +H M++ G++ + +++D+Y KC A R+
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL------------------------- 110
FE + + V W + Y+ AG E+++ +F +
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL 277
Query: 111 ----------PSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXX 160
S DVV+WN +I G + G E A+E F M ++ + + T
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 161 XXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGN 220
++LG +H I L L + ++ SSLV MY KC + + A+ + + L N
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE-----ALEEKN 392
Query: 221 SGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQ 280
V WN+M+ GY NG+ ++ F M +D T T+++S CA + LE G Q
Sbjct: 393 D---VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ 449
Query: 281 MHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGK 340
H+ I K + +VG++L+ MY+K G+L+DA IF ++ + + W ++I
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN 509
Query: 341 GKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYC------INP 394
+A LF+ M GIV + + AC+HV L +G K V+C ++
Sbjct: 510 ESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-------KQVHCLSVKCGLDR 562
Query: 395 GVEHCTSMVDLYGRAGCLIETKN 417
+ +S++D+Y + G + + +
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARK 585
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 167/377 (44%), Gaps = 40/377 (10%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
F M+ + TL SV NL LG VHA ++ G+ +++ + +S++ +Y K
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL 125
C+ E A ++FE L K+ V WN +I G
Sbjct: 375 CEKMEAAAKVFEA-------------------------------LEEKNDVFWNAMIRGY 403
Query: 126 IRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDN 185
G + +EL M +G + TF +E+G Q H +I L +
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL 463
Query: 186 FINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLK 245
F+ ++LV+MY KCG + A I + + N V WN+++ YV + +
Sbjct: 464 FVGNALVDMYAKCGALEDARQIFE----RMCDRDN----VTWNTIIGSYVQDENESEAFD 515
Query: 246 TFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYS 305
F+ M + D + + + AC + L G+Q+H K G D + GSSLI MYS
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYS 575
Query: 306 KSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLG 365
K G + DA +F + E +V ++I+G + ++A LF+ ML +G+ P+E+TF
Sbjct: 576 KCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFAT 634
Query: 366 VINACSHVGLLEEGSTY 382
++ AC L G+ +
Sbjct: 635 IVEACHKPESLTLGTQF 651
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 17/285 (5%)
Query: 166 VELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIV 225
+ +GK +H + + L ++ + + +++V++Y KC A V + + L +
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKC-----AQVSYAEKQFDFLEKD----VT 126
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI 285
WNSM+S Y GK L++F S+ + T + V+S CA +EFGRQ+H +
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM 186
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQAS 345
K+G ++Y G +L+ MY+K + DA +F I +PN WT + SG G ++A
Sbjct: 187 IKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAV 246
Query: 346 SLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDL 405
+FE M ++G P+ + F+ VIN +G L++ F M +P V M+
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISG 301
Query: 406 YGRAGCLIETKNFIF---ENGISHLTSVWKSFLSSCRLHKNIEMG 447
+G+ GC + F ++ + S S LS+ + N+++G
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 133/346 (38%), Gaps = 75/346 (21%)
Query: 34 LQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRA 93
L++GK VH+ L G+D++ L N+I+DLY KC YAE+ F+ E DV WN M+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 94 YLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTF 153
Y G K L F +L EN ++ TF
Sbjct: 135 YSSIGKPGKVLRSFVSL-------------------------------FENQIFPNKFTF 163
Query: 154 XXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPL 213
VE G+Q+H +I + L +++ +LV+MY KC R A + + +
Sbjct: 164 SIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV- 222
Query: 214 NLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAG 273
V W + SGYV G E+ + F M E
Sbjct: 223 -------DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE-------------------- 255
Query: 274 LLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMIS 333
GHR D ++I+ Y + G L DA ++F +++ P+V W MIS
Sbjct: 256 ---------------GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMIS 300
Query: 334 GCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
G G A F M + T V++A V L+ G
Sbjct: 301 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 220/424 (51%), Gaps = 9/424 (2%)
Query: 60 LDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN 119
+ +Y K F A ++ + + ++ NI+I Y+ AGD+ + +F +P + + +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
+I GLI+ + L L M G E T V +G+Q+HG I
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
L D +NSSL MY + G+ ++++ +P+ +V WN+++ G NG
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR--------NLVAWNTLIMGNAQNGC 172
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
E L ++ M + T TV+S+C++ + G+Q+HA KIG V SS
Sbjct: 173 PETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSS 232
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQ-GIVP 358
LI MYSK G L DA F + + + +W+SMIS HG+G +A LF M Q +
Sbjct: 233 LISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEI 292
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
NEV FL ++ ACSH GL ++G F MM + Y PG++H T +VDL GRAGCL + +
Sbjct: 293 NEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAI 352
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRW 478
I I +WK+ LS+C +HKN EM + V + +LQ+ P+D Y+LL+N+ S RW
Sbjct: 353 IRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRW 412
Query: 479 DEAA 482
+ +
Sbjct: 413 RDVS 416
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 174/362 (48%), Gaps = 46/362 (12%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
SLFREM G P++YTL SVF + +++ +G+ +H + ++ G++ D+V+ +S+ +
Sbjct: 76 LSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHM 135
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y++ + +G++V R++P +++V+WNT+I
Sbjct: 136 YMRNGKLQ----------DGEIV---------------------IRSMPVRNLVAWNTLI 164
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G + G L L M +G +++TF G+Q+H I + +
Sbjct: 165 MGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGAS 224
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ SSL+ MY KCG A+ + V W+SM+S Y ++G+ ++
Sbjct: 225 SVVAVVSSLISMYSKCGCLGDAAKAFSE--------REDEDEVMWSSMISAYGFHGQGDE 276
Query: 243 CLKTFRSMVHELAIVDIRTVT--TVISACANAGLLEFGRQM-HAYIQKIGHRIDAYVGSS 299
++ F +M E ++I V ++ AC+++GL + G ++ ++K G + +
Sbjct: 277 AIELFNTMA-EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTC 335
Query: 300 LIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
++ + ++G LD A I R + + ++ +W +++S C +H + A +F+ +L I P
Sbjct: 336 VVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDP 393
Query: 359 NE 360
N+
Sbjct: 394 ND 395
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V L++ M+ G PN+ T +V CS G+ +HA ++ G + V +V+S++
Sbjct: 176 VLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLIS 235
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y KC A + F + D V W+ MI AY G ++++++F + + + N +
Sbjct: 236 MYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEV 295
Query: 122 --IDGLIRC---GYERRALELLFCMVEN 144
++ L C G + + LEL MVE
Sbjct: 296 AFLNLLYACSHSGLKDKGLELFDMMVEK 323
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 240/474 (50%), Gaps = 9/474 (1%)
Query: 8 EMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCK 67
++ + P T ++ + CS + L+ GK VH + +G +V+ N +L +Y KC
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 68 AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIR 127
+ A ++F+ D+ +WN+M+ Y G +E++ +F + KD SW ++ G ++
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 128 CGYERRALELLFCMVENGTEFSEV-TFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNF 186
AL L M + T + GK++HG ++ L+ D
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 187 INSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKT 246
+ SSL++MY KCG D+A I + +V W SM+ Y + ++ +
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIV--------EKDVVSWTSMIDRYFKSSRWREGFSL 306
Query: 247 FRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSK 306
F +V + T V++ACA+ E G+Q+H Y+ ++G ++ SSL+ MY+K
Sbjct: 307 FSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTK 366
Query: 307 SGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGV 366
G+++ A + +P++ WTS+I GCA +G+ +A F+ +L G P+ VTF+ V
Sbjct: 367 CGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNV 426
Query: 367 INACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISH 426
++AC+H GL+E+G +F + + + ++ +H T +VDL R+G + K+ I E +
Sbjct: 427 LSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP 486
Query: 427 LTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
+W S L C + NI++ + ++ L ++ P +P Y+ ++N+ + +W+E
Sbjct: 487 SKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEE 540
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 133/326 (40%), Gaps = 49/326 (15%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
FSLF E+ PN+YT + V C+ +LGK VH +M R G D +S++D+
Sbjct: 304 FSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDM 363
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC E A+ + + + D+V+ W ++I
Sbjct: 364 YTKCGNIESAKHVVDGCPKPDLVS-------------------------------WTSLI 392
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVIT---L 179
G + G AL+ ++++GT+ VTF VE G + + L
Sbjct: 393 GGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRL 452
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
+ D++ + LV++ + GR ++ ++ ++P+ + W S++ G G
Sbjct: 453 SHTSDHY--TCLVDLLARSGRFEQLKSVISEMPMKPSK-------FLWASVLGGCSTYGN 503
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
D + + ++ + T T+ + A AG E +M +Q+IG + GSS
Sbjct: 504 I-DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG--VTKRPGSS 560
Query: 300 LIHMYSKSG---SLDDAWVIFRQINE 322
+ K + D + ++ QI E
Sbjct: 561 WTEIKRKRHVFIAADTSHPMYNQIVE 586
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 242/480 (50%), Gaps = 39/480 (8%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
M + + M + P+ T+ SV SA + + +GK +H + +R+G D+ V + +++
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
D+Y KC + E A +LF+ + ++VVSWN+
Sbjct: 279 DMYAKCGSLETARQLFD-------------------------------GMLERNVVSWNS 307
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+ID ++ + A+ + M++ G + ++V+ +E G+ +H + L
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 367
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
L+ + + +SL+ MYCKC D A+ + + S +V WN+M+ G+ NG+
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKL--------QSRTLVSWNAMILGFAQNGRP 419
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
D L F M D T +VI+A A + + +H + + + +V ++L
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL 479
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+ MY+K G++ A +IF ++E +V W +MI G HG GK A LFE M I PN
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNG 539
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
VTFL VI+ACSH GL+E G F MMK+ Y I ++H +MVDL GRAG L E +FI
Sbjct: 540 VTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIM 599
Query: 421 ENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
+ + +V+ + L +C++HKN+ + +E L ++ P D ++LL+N+ + W++
Sbjct: 600 QMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEK 659
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 209/477 (43%), Gaps = 48/477 (10%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F M+ P Y + + K C E L++GK +H ++++G D+ + + ++
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC+ A ++F+ E D+V+WN TI+
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWN-------------------------------TIV 208
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G + G R ALE++ M E + S +T + +GK++HG + +
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
I+++LV+MY KCG + A + + L R +V WNSM+ YV N ++
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGM---LERN-----VVSWNSMIDAYVQNENPKE 320
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
+ F+ M+ E +V + ACA+ G LE GR +H ++G + V +SLI
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MY K +D A +F ++ + W +MI G A +G+ A + F M ++ + P+ T
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 363 FLGVINACSHVGLLEEGS-TYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
++ VI A + + + + +M+ C++ V T++VD+Y + G ++ + IF+
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRS--CLDKNVFVTTALVDMYAKCGAIMIAR-LIFD 497
Query: 422 NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEML--LQVAPSDPEAYILLSNMCTSNH 476
+ W + + H GK E+ +Q P LS + +H
Sbjct: 498 MMSERHVTTWNAMIDGYGTHG---FGKAALELFEEMQKGTIKPNGVTFLSVISACSH 551
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 140/282 (49%), Gaps = 8/282 (2%)
Query: 98 GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXX 157
G V+++ +F + SK V ++T++ G + +AL+ M + E F
Sbjct: 83 GSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLL 142
Query: 158 XXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLR 217
+ +GK++HG ++ + D F + L MY KC + ++A + +P
Sbjct: 143 KVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP----- 197
Query: 218 TGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEF 277
+V WN++V+GY NG L+ +SM E T+ +V+ A + L+
Sbjct: 198 ---ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 278 GRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCAL 337
G+++H Y + G + ++L+ MY+K GSL+ A +F + E NV W SMI
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 338 HGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
+ K+A +F+ ML++G+ P +V+ +G ++AC+ +G LE G
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 145/302 (48%), Gaps = 28/302 (9%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILK--DVPLNLLRTGNSGGIVPW 227
+Q+ V L ++F + LV ++C+ G D+A+ + + D LN+L +
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL----------Y 103
Query: 228 NSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK 287
++M+ G+ + L+ F M ++ + T ++ C + L G+++H + K
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 288 IGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSL 347
G +D + + L +MY+K +++A +F ++ E ++ W ++++G + +G + A +
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 348 FEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDV--YCINPG----VEHCTS 401
+ M + + P+ +T + V+ A S + L+ G K++ Y + G V T+
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVG-------KEIHGYAMRSGFDSLVNISTA 276
Query: 402 MVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQ--VAP 459
+VD+Y + G L ET +F+ + W S + + ++N + + + +L V P
Sbjct: 277 LVDMYAKCGSL-ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 460 SD 461
+D
Sbjct: 336 TD 337
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 231/478 (48%), Gaps = 42/478 (8%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF +M+ G P+ +T S V K + LG+ +HA + G D + N ILD Y
Sbjct: 237 LFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYS 296
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
K LF+ E D V++N++I +Y A E SL FR +
Sbjct: 297 KHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM-------------- 342
Query: 125 LIRC-GYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
+C G++RR F +++G+QLH + + +
Sbjct: 343 --QCMGFDRRNF----------------PFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ +SLV+MY KC ++A +I K +P RT V W +++SGYV G +
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQ---RT-----TVSWTALISGYVQKGLHGAG 436
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
LK F M D T TV+ A A+ L G+Q+HA+I + G+ + + GS L+ M
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
Y+K GS+ DA +F ++ + N W ++IS A +G G+ A F M+ G+ P+ V+
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
LGV+ ACSH G +E+G+ YF+ M +Y I P +H M+DL GR G E + + E
Sbjct: 557 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 616
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAP-SDPEAYILLSNMCTSNHRWDE 480
+W S L++CR+HKN + + +E L + D AY+ +SN+ + W++
Sbjct: 617 FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 191/449 (42%), Gaps = 63/449 (14%)
Query: 2 VFSLFREMQAKGAC--PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSI 59
F LFR+M +C P+ T +++ C+ VHA+ ++ G D + L S
Sbjct: 129 AFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS- 187
Query: 60 LDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN 119
N+++++Y ++ + +F +P KD V++N
Sbjct: 188 ----------------------------NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFN 219
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
T+I G + G ++ L M ++G + S+ TF LG+QLH +T
Sbjct: 220 TLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTT 279
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
+ D + + +++ Y K R + ++ ++P V +N ++S Y +
Sbjct: 280 GFSRDASVGNQILDFYSKHDRVLETRMLFDEMP--------ELDFVSYNVVISSYSQADQ 331
Query: 240 YEDCLKTFRSMVHELAIVDIRT--VTTVISACANAGLLEFGRQMHAYIQKIGHRIDA--Y 295
YE L FR M + D R T++S AN L+ GRQ+H Q + D+ +
Sbjct: 332 YEASLHFFREM--QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC--QALLATADSILH 387
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGC---ALHGKGKQASSLFEGML 352
VG+SL+ MY+K ++A +IF+ + + WT++ISG LHG G + LF M
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK---LFTKMR 444
Query: 353 NQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPG----VEHCTSMVDLYGR 408
+ ++ TF V+ A + L G + I G V + +VD+Y +
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLH-----AFIIRSGNLENVFSGSGLVDMYAK 499
Query: 409 AGCLIETKNFIFENGISHLTSVWKSFLSS 437
G + + +FE W + +S+
Sbjct: 500 CGSIKDAVQ-VFEEMPDRNAVSWNALISA 527
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 166/388 (42%), Gaps = 45/388 (11%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
FREMQ G + +++ + +LQ+G+ +H L D+ + + NS++D+Y
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYA 397
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC+ FE AE +F ++LP + VSW +I G
Sbjct: 398 KCEMFEEAELIF-------------------------------KSLPQRTTVSWTALISG 426
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
++ G L+L M + + TF + LGKQLH +I +
Sbjct: 427 YVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLEN 486
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
F S LV+MY KCG A + +++P V WN+++S + NG E +
Sbjct: 487 VFSGSGLVDMYAKCGSIKDAVQVFEEMP--------DRNAVSWNALISAHADNGDGEAAI 538
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGR---QMHAYIQKIGHRIDAYVGSSLI 301
F M+ D ++ V++AC++ G +E G Q + I I + Y + ++
Sbjct: 539 GAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY--ACML 596
Query: 302 HMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+ ++G +A + ++ EP+ +W+S+++ C +H A E + + + +
Sbjct: 597 DLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDA 656
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKD 388
++ + N + G E+ + M++
Sbjct: 657 AAYVSMSNIYAAAGEWEKVRDVKKAMRE 684
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 170/404 (42%), Gaps = 16/404 (3%)
Query: 38 KGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGA 97
+ V A +++ G D D N I++ L+ A ++++ + V+ N MI ++
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 98 GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELL--FCMVENGTEFSEVTFXX 155
GDV + D+F +P + VV+W ++ R + A +L C + T VTF
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 156 XXXXXXXXXXVELGKQLHGRVITLALNGDNFINSS--LVEMYCKCGRTDKASVILKDVPL 213
Q+H + L + + F+ S L++ YC+ R D A V+ +++P
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP- 211
Query: 214 NLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAG 273
V +N++++GY +G Y + + F M T + V+ A
Sbjct: 212 -------EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 274 LLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMIS 333
G+Q+HA G DA VG+ ++ YSK + + ++F ++ E + + +IS
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 334 GCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCIN 393
+ + + + F M G F +++ +++ L+ G + +
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH--CQALLATA 382
Query: 394 PGVEHC-TSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLS 436
+ H S+VD+Y + + E IF++ T W + +S
Sbjct: 383 DSILHVGNSLVDMYAKCE-MFEEAELIFKSLPQRTTVSWTALIS 425
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 234/480 (48%), Gaps = 40/480 (8%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
LF M++ G PN +L+ CS L+ GK +H ++ G + D + ++++D+
Sbjct: 193 LELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDM 252
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC E A ++F+ +P K +V+WN++I
Sbjct: 253 YGKCDCLEVAR-------------------------------EVFQKMPRKSLVAWNSMI 281
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G + G + +E+L M+ GT S+ T + GK +HG VI +N
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN 341
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
D ++N SL+++Y KCG + A + ++ + WN M+S Y+ G +
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAES--------WNVMISSYISVGNWFK 393
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
++ + MV D+ T T+V+ AC+ LE G+Q+H I + D + S+L+
Sbjct: 394 AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLD 453
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MYSK G+ +A+ IF I + +V WT MIS HG+ ++A F+ M G+ P+ VT
Sbjct: 454 MYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT 513
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
L V++AC H GL++EG +F M+ Y I P +EH + M+D+ GRAG L+E I +
Sbjct: 514 LLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQT 573
Query: 423 G-ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
S + + S+C LH +G ++ +L++ P D Y++L N+ S WD A
Sbjct: 574 PETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAA 633
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 170/364 (46%), Gaps = 39/364 (10%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
P+ +T +V K A LG+ +H ++++G DVV+ +S++ +Y K FE
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFE----- 159
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
SL +F +P +DV SWNT+I + G +AL
Sbjct: 160 --------------------------NSLQVFDEMPERDVASWNTVISCFYQSGEAEKAL 193
Query: 136 ELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMY 195
EL M +G E + V+ +E GK++H + + D ++NS+LV+MY
Sbjct: 194 ELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMY 253
Query: 196 CKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELA 255
KC + A + + +P +V WNSM+ GYV G + C++ M+ E
Sbjct: 254 GKCDCLEVAREVFQKMP--------RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 256 IVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWV 315
T+T+++ AC+ + L G+ +H Y+ + D YV SLI +Y K G + A
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 316 IFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGL 375
+F + + W MIS G +A +++ M++ G+ P+ VTF V+ ACS +
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 376 LEEG 379
LE+G
Sbjct: 426 LEKG 429
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 185/433 (42%), Gaps = 52/433 (12%)
Query: 21 LSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFE-LT 79
LS + +C ++ K+L+ K VH +L G+ DVVL S++++Y CK A +FE
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 80 GEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLF 139
DV WN ++ Y +L++F+ R L
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFK------------------------RLLNCSI 102
Query: 140 CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG 199
C+ ++ TF LG+ +H V+ D + SSLV MY K
Sbjct: 103 CVPDS------FTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 200 RTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDI 259
+ + + ++P + WN+++S + +G+ E L+ F M +
Sbjct: 157 LFENSLQVFDEMP--------ERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNS 208
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
++T ISAC+ LE G+++H K G +D YV S+L+ MY K L+ A +F++
Sbjct: 209 VSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQK 268
Query: 320 INEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHV-GLLEE 378
+ ++ W SMI G G K + M+ +G P++ T ++ ACS LL
Sbjct: 269 MPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG 328
Query: 379 GSTYFRMMKDVYCINPGVEHCTSMVDLYGRAG--CLIETKNFIFENGISHLTSVWKSFLS 436
+ +++ V +N + S++DLY + G L ET +F + W +S
Sbjct: 329 KFIHGYVIRSV--VNADIYVNCSLIDLYFKCGEANLAET---VFSKTQKDVAESWNVMIS 383
Query: 437 SCRLHKNIEMGKW 449
S I +G W
Sbjct: 384 S-----YISVGNW 391
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/542 (26%), Positives = 264/542 (48%), Gaps = 66/542 (12%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LFREMQ GA T+ + + CS ++ G+ +H ++LR G++++V + NS++ +Y
Sbjct: 76 LFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYS 135
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP----SKDVVSWNT 120
+ E + ++F + ++ +WN ++ +Y G V+ ++ + + D+V+WN+
Sbjct: 136 RNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNS 195
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
++ G G + A+ +L M G + S + ++LGK +HG ++
Sbjct: 196 LLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ 255
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVI------------------------LKDVPLNLL 216
L D ++ ++L++MY K G A ++ LKD ++
Sbjct: 256 LWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMI 315
Query: 217 RTGNSG---GIVPWNSMVSGYV--------------------------W---------NG 238
R G + WNS+ SGY W NG
Sbjct: 316 RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNG 375
Query: 239 KYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
+ + LK F M E + T++T++ LL G+++H + + DAYV +
Sbjct: 376 NFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT 435
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
+L+ MY KSG L A IF I ++ W M+ G A+ G+G++ + F ML G+ P
Sbjct: 436 ALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEP 495
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
+ +TF V++ C + GL++EG YF +M+ Y I P +EHC+ MVDL GR+G L E +F
Sbjct: 496 DAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDF 555
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRW 478
I + ++W +FLSSC++H+++E+ + + L + P + Y+++ N+ ++ +RW
Sbjct: 556 IQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRW 615
Query: 479 DE 480
++
Sbjct: 616 ED 617
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 193/435 (44%), Gaps = 64/435 (14%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
++ + MQ G P+ ++SS+ + + +L+LGK +H ++LRN + DV + +++D
Sbjct: 209 AIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLID 268
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWN-----------------IMIR------------ 92
+Y+K YA +F++ ++V WN +MIR
Sbjct: 269 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 328
Query: 93 ------AYLGAGDVEKSLDMFRNLPSK----DVVSWNTIIDGLIRCGYERRALELLFCMV 142
Y G EK+LD+ + K +VVSW I G + G R AL++ M
Sbjct: 329 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 143 ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTD 202
E G + T + GK++HG + L D ++ ++LV+MY K G
Sbjct: 389 EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQ 448
Query: 203 KASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTV 262
A I + + + WN M+ GY G+ E+ + F M+ D T
Sbjct: 449 SAIEIFWGI--------KNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITF 500
Query: 263 TTVISACANAGLLEFG-------RQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWV 315
T+V+S C N+GL++ G R + I I H S ++ + +SG LD+AW
Sbjct: 501 TSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEH------CSCMVDLLGRSGYLDEAWD 554
Query: 316 IFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP-NEVTFLGVINACSHV 373
+ ++ +P+ +W + +S C +H + A ++ + Q + P N ++ +IN S++
Sbjct: 555 FIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRL--QVLEPHNSANYMMMINLYSNL 612
Query: 374 GLLEEGSTYFRMMKD 388
E+ +M++
Sbjct: 613 NRWEDVERIRNLMRN 627
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 180/417 (43%), Gaps = 68/417 (16%)
Query: 36 LGKGVHAWMLRNGVD-ADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAY 94
LG +H +++ G+D +D +V++ + Y +C + +A +LF+
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFD----------------- 47
Query: 95 LGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFX 154
+P +D ++WN I+ +R G +A+EL M +G + + T
Sbjct: 48 --------------EMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMV 93
Query: 155 XXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLN 214
G+Q+HG V+ L L + + +SL+ MY + G+ + + + +
Sbjct: 94 KLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR 153
Query: 215 LLRTGNS---------------------------GGIVPWNSMVSGYVWNGKYEDCLKTF 247
L + NS IV WNS++SGY G +D +
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 248 RSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKS 307
+ M ++++++ A A G L+ G+ +H YI + D YV ++LI MY K+
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 308 GSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVI 367
G L A ++F ++ N+ W S++SG + K A +L M +GI P+ +T+ +
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 368 NACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGI 424
+ + +G E+ MK+ + P V T++ +GC +KN F N +
Sbjct: 334 SGYATLGKPEKALDVIGKMKE-KGVAPNVVSWTAIF-----SGC---SKNGNFRNAL 381
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/481 (32%), Positives = 235/481 (48%), Gaps = 46/481 (9%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
++ M+ P +TL S C++ K +LG+ +H L+ G+D +V + N+++ LY +
Sbjct: 403 YKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE 462
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL 125
G + + +F ++P D VSWN+II L
Sbjct: 463 -------------------------------TGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Query: 126 IRCGYERRALELLFCMV---ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
R ER E + C + G + + +TF ELGKQ+HG + +
Sbjct: 492 ARS--ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIA 549
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ ++L+ Y KCG D I R V WNSM+SGY+ N
Sbjct: 550 DEATTENALIACYGKCGEMDGCEKIFS-------RMAERRDNVTWNSMISGYIHNELLAK 602
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
L M+ +D TV+SA A+ LE G ++HA + D VGS+L+
Sbjct: 603 ALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVD 662
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGM-LNQGIVPNEV 361
MYSK G LD A F + N + W SMISG A HG+G++A LFE M L+ P+ V
Sbjct: 663 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHV 722
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
TF+GV++ACSH GLLEEG +F M D Y + P +EH + M D+ GRAG L + ++FI +
Sbjct: 723 TFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEK 782
Query: 422 NGISHLTSVWKSFLSS-CRLH-KNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
+ +W++ L + CR + + E+GK +EML Q+ P + Y+LL NM + RW+
Sbjct: 783 MPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWE 842
Query: 480 E 480
+
Sbjct: 843 D 843
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 147/316 (46%), Gaps = 20/316 (6%)
Query: 71 YAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGY 130
+ RL++ + DV N +I AYL GD + +F +P ++ VSW I+ G R G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 131 ERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVEL--GKQLHGRVITLALNGDNFIN 188
+ AL L MV+ G ++ F V + G+Q+HG + L+ D ++
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 189 SSLVEMYCKC-GRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTF 247
+ L+ MY KC G A D+ + NS V WNS++S Y G + F
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVK-----NS---VSWNSIISVYSQAGDQRSAFRIF 194
Query: 248 RSMVHELAIVDIRTV-TTVISACA----NAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
SM ++ + T + V +AC+ + LLE Q+ IQK G D +VGS L+
Sbjct: 195 SSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE---QIMCTIQKSGLLTDLFVGSGLVS 251
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
++KSGSL A +F Q+ N ++ G G++A+ LF M N I + +
Sbjct: 252 AFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPES 310
Query: 363 FLGVINACSHVGLLEE 378
++ ++++ L EE
Sbjct: 311 YVILLSSFPEYSLAEE 326
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 184/448 (41%), Gaps = 61/448 (13%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCS--AEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
R+M +G NQY SV + C + G+ +H M + D V+ N ++ +
Sbjct: 89 FLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISM 148
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC G V +L F ++ K+ VSWN+II
Sbjct: 149 YWKC------------------------------IGSVGYALCAFGDIEVKNSVSWNSII 178
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXX--XXXXXVELGKQLHGRVITLA 180
+ G +R A + M +G+ +E TF V L +Q+ +
Sbjct: 179 SVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSG 238
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
L D F+ S LV + K G A + N + T N+ V N ++ G V
Sbjct: 239 LLTDLFVGSGLVSAFAKSGSLSYARKV-----FNQMETRNA---VTLNGLMVGLVRQKWG 290
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVI--------SACANAGLLEFGRQMHAYIQKIGHRI 292
E+ K F M +++D+ + VI S GL + GR++H ++ G +
Sbjct: 291 EEATKLFMDMN---SMIDVSPESYVILLSSFPEYSLAEEVGLKK-GREVHGHVITTG-LV 345
Query: 293 DAYV--GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEG 350
D V G+ L++MY+K GS+ DA +F + + + W SMI+G +G +A ++
Sbjct: 346 DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKS 405
Query: 351 MLNQGIVPNEVTFLGVINACSHVGLLEEGST-YFRMMKDVYCINPGVEHCTSMVDLYGRA 409
M I+P T + +++C+ + + G + +K I+ V +++ LY
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK--LGIDLNVSVSNALMTLYAET 463
Query: 410 GCLIETKNFIFENGISHLTSVWKSFLSS 437
G L E + IF + H W S + +
Sbjct: 464 GYLNECRK-IFSSMPEHDQVSWNSIIGA 490
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 163/373 (43%), Gaps = 53/373 (14%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVF--KCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSI 59
F +F MQ G+ P +YT S+ C E +++L + + + ++G+ D+ + + +
Sbjct: 190 AFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGL 249
Query: 60 LDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN 119
+ + K + YA ++F + +++ V+ N
Sbjct: 250 VSAFAKSGSLSYARKVFN-------------------------------QMETRNAVTLN 278
Query: 120 TIIDGLIRCGYERRALELLF---CMVENGTEFSEVTFXXXXXXXXXXXXVEL--GKQLHG 174
++ GL+R + A +L M++ E S V V L G+++HG
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPE-SYVILLSSFPEYSLAEEVGLKKGREVHG 337
Query: 175 RVITLALNGDNF---INSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMV 231
VIT L +F I + LV MY KCG A + + +S V WNSM+
Sbjct: 338 HVITTGLV--DFMVGIGNGLVNMYAKCGSIADARRVFY-----FMTDKDS---VSWNSMI 387
Query: 232 SGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR 291
+G NG + + ++ ++SM + T+ + +S+CA+ + G+Q+H K+G
Sbjct: 388 TGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 447
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKG-KQASSLFEG 350
++ V ++L+ +Y+++G L++ IF + E + W S+I A + +A F
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLN 507
Query: 351 MLNQGIVPNEVTF 363
G N +TF
Sbjct: 508 AQRAGQKLNRITF 520
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 278 GRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCAL 337
R H+ + K D Y+ ++LI+ Y ++G A +F ++ N W ++SG +
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 338 HGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSH---VGLLEEGSTYFRMMKDVYCINP 394
+G+ K+A M+ +GI N+ F+ V+ AC VG+L + M K Y ++
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 395 GVEHCTSMVDLY-------GRAGCL---IETKNFIFENGISHLTSVWKSFLSSCRLHKNI 444
V + ++ +Y G A C IE KN + N I + S S+ R+ ++
Sbjct: 140 VVSNV--LISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 445 EM-GKWVSEM----LLQVAPS--DPEAYILLSNMCT 473
+ G +E L+ A S +P+ +L MCT
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCT 233
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 244/486 (50%), Gaps = 13/486 (2%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V + ++ M +KG P+ +T SV K C ++ G+ VH + + + + + N+++
Sbjct: 128 VIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALIS 187
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL----PSKDVVS 117
+Y + + A RLF+ E D V+WN +I Y G ++ ++F + V++
Sbjct: 188 MYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVIT 247
Query: 118 WNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
WN I G ++ G AL L+ M T V + LGK++HG I
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
+ +G + + ++L+ MY KC A ++ + N L T WNS++SGY
Sbjct: 308 HSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCT--------WNSIISGYAQL 359
Query: 238 GKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRID-AYV 296
K E+ R M+ + T+ +++ CA L+ G++ H YI + D +
Sbjct: 360 NKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML 419
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
+SL+ +Y+KSG + A + +++ + +TS+I G G+G A +LF+ M GI
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGI 479
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
P+ VT + V++ACSH L+ EG F M+ Y I P ++H + MVDLYGRAG L + K
Sbjct: 480 KPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAK 539
Query: 417 NFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNH 476
+ I + W + L++C +H N ++GKW +E LL++ P +P Y+L++NM +
Sbjct: 540 DIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAG 599
Query: 477 RWDEAA 482
W + A
Sbjct: 600 SWSKLA 605
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 8/206 (3%)
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
G Q+H I+ + + + LV Y ++A I+++ ++L +PWN
Sbjct: 62 GVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENS--DILHP------LPWN 113
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
+++ Y N +E+ + ++ MV + D T +V+ AC + FGR +H I+
Sbjct: 114 VLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVS 173
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
++ YV ++LI MY + ++ A +F ++ E + W ++I+ A G +A LF
Sbjct: 174 SYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELF 233
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVG 374
+ M G+ + +T+ + C G
Sbjct: 234 DKMWFSGVEVSVITWNIISGGCLQTG 259
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 156/512 (30%), Positives = 262/512 (51%), Gaps = 41/512 (8%)
Query: 5 LFREMQAKGACP---NQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
+F EM K + +T++++ K + N+ G+ +H +++ G D V+S++
Sbjct: 109 MFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIH 168
Query: 62 LYLKCKAFEYAERLF-----ELTGEGDVVTWNIMIRAYLGAGDVEKSLDMF-RNLPSKDV 115
+Y KC F+ +F E D V N MI AY GD++K+L +F RN D
Sbjct: 169 MYSKCGKFKEVCNIFNGSCVEFV---DSVARNAMIAAYCREGDIDKALSVFWRNPELNDT 225
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
+SWNT+I G + GYE AL++ M ENG ++ E +F +++GK++H R
Sbjct: 226 ISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHAR 285
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKA----------------SVIL------KDVPL 213
V+ + F++S +V++YCKCG A S+I+ K V
Sbjct: 286 VLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEA 345
Query: 214 N-LLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMV-HELAIVDIRTVTTVISACAN 271
L + + +V W +M GY+ + + L+ R+ + +E D + +V+ AC+
Sbjct: 346 KRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSL 405
Query: 272 AGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSM 331
+E G+++H + + G +D + ++ + MYSK G+++ A IF E + ++ +M
Sbjct: 406 QAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAM 465
Query: 332 ISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYC 391
I+GCA HG ++ FE M G P+E+TF+ +++AC H GL+ EG YF+ M + Y
Sbjct: 466 IAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYN 525
Query: 392 INPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTS---VWKSFLSSCRLHKNIEMGK 448
I+P H T M+DLYG+A L K GI + + +FL++C +KN E+ K
Sbjct: 526 ISPETGHYTCMIDLYGKAYRL--DKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVK 583
Query: 449 WVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
V E LL + S+ YI ++N S+ RWDE
Sbjct: 584 EVEEKLLVIEGSNGSRYIQIANAYASSGRWDE 615
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 198/470 (42%), Gaps = 77/470 (16%)
Query: 41 HAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDV 100
H +++G V N +++LY K A +F+ E +V +WN +I AY+ +V
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 101 EKSLDMFRNLP-SKDVVSWNTIIDGLIRC-GYERRALELLFCMVENGTE---FSEVTFXX 155
+++ ++F + +D++++NT++ G + G E A+E+ M + + T
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 156 XXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILK------ 209
V G+QLHG ++ +G F SSL+ MY KCG+ + I
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 210 -------------------DVPLNLL-RTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRS 249
D L++ R + WN++++GY NG E+ LK S
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 250 MVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGS 309
M D + V++ ++ L+ G+++HA + K G + +V S ++ +Y K G+
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 310 LDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV------------ 357
+ A N++ +SMI G + GK +A LF+ + + +V
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 358 --------------------PNEVTFLGVINACSHVGLLEEGSTYFRMMKDV--YCINPG 395
P+ + + V+ ACS +E G K++ + + G
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPG-------KEIHGHSLRTG 423
Query: 396 V----EHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH 441
+ + T+ VD+Y + G +E IF++ T ++ + ++ C H
Sbjct: 424 ILMDKKLVTAFVDMYSKCGN-VEYAERIFDSSFERDTVMYNAMIAGCAHH 472
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 142/482 (29%), Positives = 237/482 (49%), Gaps = 43/482 (8%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
SLF EM +G PN++T S+ K C L+ G +H + L+ G + V + NS++D+
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC AE++F R + + ++SWN +I
Sbjct: 152 YSKCGRINEAEKVF-------------------------------RRIVDRSLISWNAMI 180
Query: 123 DGLIRCGYERRALELLFCMVENGTE--FSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
G + GY +AL+ M E + E T + GKQ+HG ++
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 181 LN--GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG 238
+ I SLV++Y KCG A + ++ W+S++ GY G
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQI--------KEKTMISWSSLILGYAQEG 292
Query: 239 KYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
++ + + F+ + + +D ++++I A+ LL G+QM A K+ ++ V +
Sbjct: 293 EFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLN 352
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
S++ MY K G +D+A F ++ +V WT +I+G HG GK++ +F ML I P
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEP 412
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
+EV +L V++ACSH G+++EG F + + + I P VEH +VDL GRAG L E K+
Sbjct: 413 DEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHL 472
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRW 478
I I +W++ LS CR+H +IE+GK V ++LL++ +P Y+++SN+ W
Sbjct: 473 IDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYW 532
Query: 479 DE 480
+E
Sbjct: 533 NE 534
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 208/470 (44%), Gaps = 59/470 (12%)
Query: 16 PNQ-YTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAER 74
PNQ L S+ + C+ + G VH ++L++G +++ N ++D+Y KC+ A +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 75 LFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRA 134
+F+ ++P ++VVSW+ ++ G + G + +
Sbjct: 63 VFD-------------------------------SMPERNVVSWSALMSGHVLNGDLKGS 91
Query: 135 LELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEM 194
L L M G +E TF +E G Q+HG + + + +SLV+M
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 195 YCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHEL 254
Y KCGR ++A + + + ++ WN+M++G+V G L TF M+ E
Sbjct: 152 YSKCGRINEAEKVFRRIV--------DRSLISWNAMIAGFVHAGYGSKALDTF-GMMQEA 202
Query: 255 AI---VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI--DAYVGSSLIHMYSKSGS 309
I D T+T+++ AC++ G++ G+Q+H ++ + G A + SL+ +Y K G
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 310 LDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINA 369
L A F QI E + W+S+I G A G+ +A LF+ + + +I
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 322
Query: 370 CSHVGLLEEGSTYFRMMKDVYCINPGVEHCT--SMVDLYGRAGCLIETKNFIFENGISHL 427
+ LL +G +M + G+E S+VD+Y + G + E + E + +
Sbjct: 323 FADFALLRQGK---QMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDV 379
Query: 428 TSVWKSFLSSCRLH----KNIEMGKWVSEMLLQVAPSDPEAYILLSNMCT 473
S W ++ H K++ + EML D Y+ + + C+
Sbjct: 380 IS-WTVVITGYGKHGLGKKSVRI---FYEMLRHNIEPDEVCYLAVLSACS 425
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 154/509 (30%), Positives = 255/509 (50%), Gaps = 32/509 (6%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCS--AEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
+LF +M+ +G P+ +T +SV + A+ Q + HA L++G + N+++
Sbjct: 134 NLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQ-FHAAALKSGAGYITSVSNALVS 192
Query: 62 LYLKCKA----FEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK-DVV 116
+Y KC + A ++F+ E D +W M+ Y+ G + ++ + +V
Sbjct: 193 VYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
++N +I G + G+ + ALE++ MV +G E E T+ ++LGKQ+H V
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPL------NLLRTG--NSG------ 222
+ +F NS LV +Y KCG+ D+A I + +P N L +G +SG
Sbjct: 313 LRREDFSFHFDNS-LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 223 ---------GIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAG 273
I+ W M+SG NG E+ LK F M E + I +CA G
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 274 LLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMIS 333
G+Q HA + KIG G++LI MY+K G +++A +FR + + W ++I+
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIA 491
Query: 334 GCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCIN 393
HG G +A ++E ML +GI P+ +T L V+ ACSH GL+++G YF M+ VY I
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 394 PGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEM 453
PG +H ++DL R+G + ++ I +W++ LS CR+H N+E+G ++
Sbjct: 552 PGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611
Query: 454 LLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
L + P Y+LLSNM + +W+E A
Sbjct: 612 LFGLIPEHDGTYMLLSNMHAATGQWEEVA 640
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/506 (23%), Positives = 209/506 (41%), Gaps = 66/506 (13%)
Query: 33 NLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIR 92
+LQL + VH ++ G ++N ++D+Y K YA +LF+ E D + M+
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 93 AYLGAGDVEKSLDMFRNLP--SKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSE 150
Y +GD+ + +F P +D V +N +I G A+ L M G +
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 151 VTFXXXXXXXXXXXXVELG-KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDK------ 203
TF E Q H + ++++LV +Y KC +
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208
Query: 204 ---ASVILKD-VPLNLLRTG------------------NSGGIVPWNSMVSGYVWNGKYE 241
++ KD + TG ++ +V +N+M+SGYV G Y+
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
+ L+ R MV +D T +VI ACA AGLL+ G+Q+HAY+ + + +SL+
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR-REDFSFHFDNSLV 327
Query: 302 HMYSKSGSLDDA--------------W-----------------VIFRQINEPNVFLWTS 330
+Y K G D+A W +IF+++ E N+ W
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMI 387
Query: 331 MISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVY 390
MISG A +G G++ LF M +G P + F G I +C+ +G G Y + +
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI- 446
Query: 391 CINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWV 450
+ + +++ +Y + G + E + +F + W + +++ H + V
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEARQ-VFRTMPCLDSVSWNALIAALGQHGHGAEAVDV 505
Query: 451 SEMLLQVAPSDPEAYILLSNMCTSNH 476
E +L+ P+ LL+ + +H
Sbjct: 506 YEEMLKKGIR-PDRITLLTVLTACSH 530
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 245/484 (50%), Gaps = 25/484 (5%)
Query: 21 LSSVFKCCSAEKNLQLGKGVHAWMLRNGVD-ADVVLVNSILDLYLKCKAFEYAERLFELT 79
L+S+ + C K+L+ GK +H + G + +L N ++ +Y+KC A ++F+
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 80 GEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLF 139
++ +WN M+ Y+ +G + ++ +F ++P +DVVSWNT++ G + G AL
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 140 CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG 199
+G +F+E +F ++L +Q HG+V+ + ++ S+++ Y KCG
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 200 RTDKAS-----VILKDVPL------------------NLLRTGNSGGIVPWNSMVSGYVW 236
+ + A + +KD+ + L V W ++++GYV
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
G L FR M+ + T ++ + A A+ L G+++H Y+ + R +A V
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEP-NVFLWTSMISGCALHGKGKQASSLFEGMLNQG 355
SSLI MYSKSGSL+ + +FR ++ + W +MIS A HG G +A + + M+
Sbjct: 349 ISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR 408
Query: 356 IVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET 415
+ PN T + ++NACSH GL+EEG +F M + I P EH ++DL GRAGC E
Sbjct: 409 VQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL 468
Query: 416 KNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSN 475
I E +W + L CR+H N E+GK ++ L+++ P YILLS++ +
Sbjct: 469 MRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADH 528
Query: 476 HRWD 479
+W+
Sbjct: 529 GKWE 532
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 166/349 (47%), Gaps = 18/349 (5%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
++E + G N+++ + + C + LQL + H +L G ++VVL SI+D Y
Sbjct: 166 FYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYA 225
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC E A+R F+ D+ W +I Y GD+E + +F +P K+ VSW +I G
Sbjct: 226 KCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAG 285
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+R G RAL+L M+ G + + TF + GK++HG +I + +
Sbjct: 286 YVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPN 345
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ SSL++MY K G + + + + + V WN+M+S +G L
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVFRIC-------DDKHDCVFWNTMISALAQHGLGHKAL 398
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFG-RQMHAYIQKIGHRIDAYVGSSLIHM 303
+ M+ + T+ +++AC+++GL+E G R + + G D + LI +
Sbjct: 399 RMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 304 YSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGK---GKQAS 345
++G + + R+I EP+ +W +++ C +HG GK+A+
Sbjct: 459 LGRAGCFKE---LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAA 504
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 228 NSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK 287
S +S + + + S+ + + + +++ C + L+ G+ +H +++
Sbjct: 15 QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKI 74
Query: 288 IG-HRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
G R + + + LI MY K G DA +F Q++ N++ W +M+SG G +A
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 347 LFEGMLNQGIVPNEVTFLG 365
+F+ M + +V +G
Sbjct: 135 VFDSMPERDVVSWNTMVIG 153
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/480 (30%), Positives = 234/480 (48%), Gaps = 43/480 (8%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF M G P+ Y SS+ C++ L G VHA+ ++ + D + NS++D+Y
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAG---DVEKSLDMFRNLPSKDVVSWNTI 121
KC A ++F++ DVV +N MI Y G ++ ++L++FR++ +
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFR-------- 448
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
LIR S +TF + L KQ+HG + L
Sbjct: 449 ---LIRP--------------------SLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL 485
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
N D F S+L+++Y C + ++ ++ + +V WNSM +GYV + E
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK--------DLVIWNSMFAGYVQQSENE 537
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
+ L F + D T +++A N ++ G++ H + K G + Y+ ++L+
Sbjct: 538 EALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALL 597
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
MY+K GS +DA F +V W S+IS A HG+GK+A + E M+++GI PN +
Sbjct: 598 DMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYI 657
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
TF+GV++ACSH GL+E+G F +M + I P EH MV L GRAG L + + I +
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEK 716
Query: 422 NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
VW+S LS C N+E+ + +EM + P D ++ +LSN+ S W EA
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEA 776
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 203/456 (44%), Gaps = 49/456 (10%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
LF ++ P+ Y LS+V CS L+ GK +HA +LR G++ D L+N ++D
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLID- 292
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
+Y+ G V + +F +P+K+++SW T++
Sbjct: 293 ------------------------------SYVKCGRVIAAHKLFNGMPNKNIISWTTLL 322
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G + + A+EL M + G + + G Q+H I L
Sbjct: 323 SGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG 382
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG---K 239
D+++ +SL++MY KC A + + +V +N+M+ GY G +
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTDARKVFDIFA--------AADVVLFNAMIEGYSRLGTQWE 434
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
+ L FR M L + T +++ A A+ L +Q+H + K G +D + GS+
Sbjct: 435 LHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSA 494
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
LI +YS L D+ ++F ++ ++ +W SM +G + ++A +LF + P+
Sbjct: 495 LIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPD 554
Query: 360 EVTFLGVINACSHVGLLEEGSTYF-RMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
E TF ++ A ++ ++ G + +++K NP + + +++D+Y + G E +
Sbjct: 555 EFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGS-PEDAHK 611
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEML 454
F++ S W S +SS + N GK +ML
Sbjct: 612 AFDSAASRDVVCWNSVISS---YANHGEGKKALQML 644
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 215/475 (45%), Gaps = 58/475 (12%)
Query: 10 QAKGACPNQYTLSSVFKCCSAEKNLQLGKG------VHAWMLRNGVDADVVLVNSILDLY 63
+ + PN+Y LSS + CS G+G + ++++++G D DV + ++D Y
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLD----GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFY 193
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
LK G+++ + +F LP K V+W T+I
Sbjct: 194 LK-------------------------------DGNIDYARLVFDALPEKSTVTWTTMIS 222
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
G ++ G +L+L + ++E+ +E GKQ+H ++ L
Sbjct: 223 GCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEM 282
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
D + + L++ Y KCGR A + +P + I+ W +++SGY N +++
Sbjct: 283 DASLMNVLIDSYVKCGRVIAAHKLFNGMP--------NKNIISWTTLLSGYKQNALHKEA 334
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
++ F SM D+ ++++++CA+ L FG Q+HAY K D+YV +SLI M
Sbjct: 335 MELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDM 394
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKG---KQASSLFEGMLNQGIVPNE 360
Y+K L DA +F +V L+ +MI G + G +A ++F M + I P+
Sbjct: 395 YAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSL 454
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
+TF+ ++ A + + L +M Y +N + ++++D+Y CL +++
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFD 513
Query: 421 ENGISHLTSVWKS-FLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTS 474
E + L +W S F + +N E E LQ++ P+ + +NM T+
Sbjct: 514 EMKVKDLV-IWNSMFAGYVQQSENEEALNLFLE--LQLSRERPDEFT-FANMVTA 564
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 133/284 (46%), Gaps = 30/284 (10%)
Query: 172 LHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMV 231
+HG++I L D ++++ L+ +Y + G A + + +P +V W++MV
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP--------ERNLVSWSTMV 117
Query: 232 SGYVWNGKYEDCLKTFRSMVHELA-IVDIRTVTTVISACANAGLLEFGR----QMHAYIQ 286
S +G YE+ L F + +++ I AC +GL GR Q+ +++
Sbjct: 118 SACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLV 175
Query: 287 KIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
K G D YVG+ LI Y K G++D A ++F + E + WT+MISGC G+ +
Sbjct: 176 KSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQ 235
Query: 347 LFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTS----M 402
LF ++ +VP+ V++ACS + LE G + + G+E S +
Sbjct: 236 LFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQI-----HAHILRYGLEMDASLMNVL 290
Query: 403 VDLYGRAGCLIETKNFIFENGISHLTSV-WKSFLSSCR---LHK 442
+D Y + G +I NG+ + + W + LS + LHK
Sbjct: 291 IDSYVKCGRVIAAHKLF--NGMPNKNIISWTTLLSGYKQNALHK 332
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 38/239 (15%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+LF E+Q P+++T +++ ++QLG+ H +L+ G++ + + N++LD+
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC + E A + F+ DVV WN +I +Y G+ +K+L M
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK------------- 646
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
M+ G E + +TF VE G + ++ +
Sbjct: 647 ------------------MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE 688
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ +V + + GR +KA +++ +P + W S++SG G E
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMP-------TKPAAIVWRSLLSGCAKAGNVE 740
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
R ++ A+ LL + +H I G +D Y+ + LI++YS++G + A +F +
Sbjct: 45 REFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEK 104
Query: 320 INEPNVFLWTSMISGCALHGKGKQASSLF-EGMLNQGIVPNEVTFLGVINACSHVGLLEE 378
+ E N+ W++M+S C HG +++ +F E + PNE I ACS GL
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGR 162
Query: 379 GSTYFRMMKDVYCINPGVEH----CTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSF 434
G ++ + + G + T ++D Y + G I+ +F+ T W +
Sbjct: 163 GRWMVFQLQS-FLVKSGFDRDVYVGTLLIDFYLKDGN-IDYARLVFDALPEKSTVTWTTM 220
Query: 435 LSSCRLHKNIEMGK-WVSEMLLQVAPSD---PEAYIL 467
+S C ++MG+ +VS L D P+ YIL
Sbjct: 221 ISGC-----VKMGRSYVSLQLFYQLMEDNVVPDGYIL 252
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 230/480 (47%), Gaps = 44/480 (9%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF M+ N+YT ++ C+ L GK H ++++G++ LV S+LD+Y+
Sbjct: 229 LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYV 288
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV-VSWNTIID 123
KC A R+F D+V W MI Y G V ++L +F+ + ++ + TI
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIAS 348
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
L CG ++EN +ELG+ +HG I + +
Sbjct: 349 VLSGCG-----------LIEN---------------------LELGRSVHGLSIKVGIWD 376
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
N N +LV MY KC + A + + + IV WNS++SG+ NG +
Sbjct: 377 TNVAN-ALVHMYAKCYQNRDAKYVFE--------MESEKDIVAWNSIISGFSQNGSIHEA 427
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDA--YVGSSLI 301
L F M E + TV ++ SACA+ G L G +HAY K+G + +VG++L+
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALL 487
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
Y+K G A +IF I E N W++MI G G + LFE ML + PNE
Sbjct: 488 DFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNES 547
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
TF +++AC H G++ EG YF M Y P +H T MVD+ RAG L + + I +
Sbjct: 548 TFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEK 607
Query: 422 NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
I + +FL C +H ++G+ V + +L + P D Y+L+SN+ S+ RW++A
Sbjct: 608 MPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQA 667
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 186/435 (42%), Gaps = 43/435 (9%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V L+ + G + S K C+ ++L GK +H +++ +VVL +LD
Sbjct: 126 VVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-LLD 184
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y KC + A ++F +VV W MI Y+ E+ L +F
Sbjct: 185 MYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNR------------ 232
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
M EN +E T+ + GK HG ++ +
Sbjct: 233 -------------------MRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ + +SL++MY KCG A + + + +V W +M+ GY NG
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNE--------HSHVDLVMWTAMIVGYTHNGSVN 325
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
+ L F+ M + T+ +V+S C LE GR +H K+G D V ++L+
Sbjct: 326 EALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALV 384
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
HMY+K DA +F +E ++ W S+ISG + +G +A LF M ++ + PN V
Sbjct: 385 HMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGV 444
Query: 362 TFLGVINACSHVGLLEEGST-YFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
T + +AC+ +G L GS+ + +K + + V T+++D Y + G ++ IF
Sbjct: 445 TVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG-DPQSARLIF 503
Query: 421 ENGISHLTSVWKSFL 435
+ T W + +
Sbjct: 504 DTIEEKNTITWSAMI 518
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 157/360 (43%), Gaps = 40/360 (11%)
Query: 22 SSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGE 81
S F S N+ + H + NG+ D+ + ++ LY + A +F+ E
Sbjct: 45 SPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPE 104
Query: 82 GDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCM 141
D W +M+R Y N S +VV +L +
Sbjct: 105 PDFYLWKVMLRCYC------------LNKESVEVV-------------------KLYDLL 133
Query: 142 VENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRT 201
+++G + ++ F ++ GK++H +++ + + DN + + L++MY KCG
Sbjct: 134 MKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEI 192
Query: 202 DKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRT 261
A + D+ L +V W SM++GYV N E+ L F M + + T
Sbjct: 193 KSAHKVFNDITLR--------NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYT 244
Query: 262 VTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN 321
T+I AC L G+ H + K G + + + +SL+ MY K G + +A +F + +
Sbjct: 245 YGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS 304
Query: 322 EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGST 381
++ +WT+MI G +G +A SLF+ M I PN VT V++ C + LE G +
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRS 364
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 161/365 (44%), Gaps = 46/365 (12%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
SLF++M+ PN T++SV C +NL+LG+ VH ++ G+ D + N+++ +
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHM 386
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC A+ +FE+ E D+V WN +I + G + ++L +F + S+ V
Sbjct: 387 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTP----- 441
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
NG VT + +G LH + L
Sbjct: 442 ---------------------NG-----VTVASLFSACASLGSLAVGSSLHAYSVKLGFL 475
Query: 183 GDN--FINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
+ + ++L++ Y KCG A +I + + W++M+ GY G
Sbjct: 476 ASSSVHVGTALLDFYAKCGDPQSARLIFDTI--------EEKNTITWSAMIGGYGKQGDT 527
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK-IGHRIDAYVGSS 299
L+ F M+ + + T T+++SAC + G++ G++ + + K +
Sbjct: 528 IGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTC 587
Query: 300 LIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
++ M +++G L+ A I ++ +P+V + + + GC +H + + + ML+ + P
Sbjct: 588 MVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD--LHP 645
Query: 359 NEVTF 363
++ ++
Sbjct: 646 DDASY 650
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 265 VISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPN 324
++S C N L RQ H + G D + + L+ +Y G DA ++F QI EP+
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 325 VFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFR 384
+LW M+ L+ + + L++ ++ G +++ F + AC+ + L+ G
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 385 MMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLS 436
+ V + V T ++D+Y + G I++ + +F + W S ++
Sbjct: 167 QLVKVPSFDNVV--LTGLLDMYAKCG-EIKSAHKVFNDITLRNVVCWTSMIA 215
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/478 (29%), Positives = 239/478 (50%), Gaps = 42/478 (8%)
Query: 5 LFREM-QAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
FR M A P++ TL ++ C+ N +LG+ VH +++R G D+ LVNS+L+ Y
Sbjct: 149 FFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCY 208
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
K +AF+ A LF++ E KDV+SW+T+I
Sbjct: 209 AKSRAFKEAVNLFKMIAE-------------------------------KDVISWSTVIA 237
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
++ G AL + M+++GTE + T +E G++ H I L
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ ++++LV+MY KC ++A + +P +V W +++SG+ NG
Sbjct: 298 EVKVSTALVDMYMKCFSPEEAYAVFSRIP--------RKDVVSWVALISGFTLNGMAHRS 349
Query: 244 LKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
++ F M+ E D + V+ +C+ G LE + H+Y+ K G + ++G+SL+
Sbjct: 350 IEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVE 409
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV-PNEV 361
+YS+ GSL +A +F I + +WTS+I+G +HGKG +A F M+ V PNEV
Sbjct: 410 LYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEV 469
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
TFL +++ACSH GL+ EG F++M + Y + P +EH +VDL GR G L
Sbjct: 470 TFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKR 529
Query: 422 NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
S + + L +CR+H+N EM + V++ L ++ + Y+L+SN+ W+
Sbjct: 530 MPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWE 587
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 212/477 (44%), Gaps = 52/477 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRN-GVDADVVLVNSILDLY 63
+FR+ + P+ +TL K C + + G+ +H ++ ++ + +D+ + +S++ +Y
Sbjct: 51 MFRDEEK----PDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMY 106
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
+KC G + ++L MF L D+V+W++++
Sbjct: 107 IKC-------------------------------GRMIEALRMFDELEKPDIVTWSSMVS 135
Query: 124 GLIRCGYERRALELLFCMV-ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G + G +A+E MV + VT LG+ +HG VI +
Sbjct: 136 GFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFS 195
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
D + +SL+ Y K R K +V NL + ++ W+++++ YV NG +
Sbjct: 196 NDLSLVNSLLNCYAK-SRAFKEAV-------NLFKMIAEKDVISWSTVIACYVQNGAAAE 247
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
L F M+ + ++ TV V+ ACA A LE GR+ H + G + V ++L+
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 307
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGM-LNQGIVPNEV 361
MY K S ++A+ +F +I +V W ++ISG L+G ++ F M L P+ +
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 367
Query: 362 TFLGVINACSHVGLLEEGSTYFR-MMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
+ V+ +CS +G LE+ + ++K + NP + S+V+LY R G L
Sbjct: 368 LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI--GASLVELYSRCGSLGNASKVF- 424
Query: 421 ENGIS-HLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNH 476
NGI+ T VW S ++ +H +++ + P LS + +H
Sbjct: 425 -NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSH 480
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 238/495 (48%), Gaps = 53/495 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF + + G ++ +LS VF+ C+ K L G ++ +++ + DV + N+ +D+Y
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 428
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC+A A R+F+ + +D VSWN II
Sbjct: 429 KCQALAEAFRVFD-------------------------------EMRRRDAVSWNAIIAA 457
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+ G L L M+ + E E TF + G ++H ++ + +
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHSSIVKSGMASN 516
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGI----------------VPWN 228
+ + SL++MY KCG ++A + + + N G V WN
Sbjct: 517 SSVGCSLIDMYSKCGMIEEA----EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWN 572
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
S++SGYV + ED F M+ D T TV+ CAN G+Q+HA + K
Sbjct: 573 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK 632
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
+ D Y+ S+L+ MYSK G L D+ ++F + + W +MI G A HGKG++A LF
Sbjct: 633 ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLF 692
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGR 408
E M+ + I PN VTF+ ++ AC+H+GL+++G YF MMK Y ++P + H ++MVD+ G+
Sbjct: 693 ERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGK 752
Query: 409 AGCLIETKNFIFENGISHLTSVWKSFLSSCRLHK-NIEMGKWVSEMLLQVAPSDPEAYIL 467
+G + I E +W++ L C +H+ N+E+ + + LL++ P D AY L
Sbjct: 753 SGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTL 812
Query: 468 LSNMCTSNHRWDEAA 482
LSN+ W++ +
Sbjct: 813 LSNVYADAGMWEKVS 827
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 200/414 (48%), Gaps = 11/414 (2%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
FS F + + + S VFK C+ + L+LGK HA M+ +G ++N +L +
Sbjct: 33 FSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQV 92
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y + F A +F+ DVV+WN MI Y + D+ K+ F +P +DVVSWN+++
Sbjct: 93 YTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSML 152
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G ++ G +++E+ M G EF TF LG Q+HG V+ + +
Sbjct: 153 SGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCD 212
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
D S+L++MY K R ++ + + +P NS V W+++++G V N
Sbjct: 213 TDVVAASALLDMYAKGKRFVESLRVFQGIP-----EKNS---VSWSAIIAGCVQNNLLSL 264
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
LK F+ M A V +V+ +CA L G Q+HA+ K D V ++ +
Sbjct: 265 ALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLD 324
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MY+K ++ DA ++F N + +MI+G + G +A LF +++ G+ +E++
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384
Query: 363 FLGVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET 415
GV AC+ V L EG Y +K ++ V + +D+YG+ L E
Sbjct: 385 LSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV--ANAAIDMYGKCQALAEA 436
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 216/500 (43%), Gaps = 75/500 (15%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ F+EMQ A +Q +SV + C+A L+LG +HA L++ AD ++ + L
Sbjct: 264 LALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 323
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
D+Y KC + A+ LF+ N + + S+N
Sbjct: 324 DMYAKCDNMQDAQILFD-------------------------------NSENLNRQSYNA 352
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+I G + + +AL L ++ +G F E++ + G Q++G I +
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
L+ D + ++ ++MY KC +A + + +R ++ V WN++++ + NGK
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDE-----MRRRDA---VSWNAIIAAHEQNGKG 464
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
+ L F SM+ D T +++ AC G L +G ++H+ I K G ++ VG SL
Sbjct: 465 YETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCSL 523
Query: 301 IHMYSKSGSLDDAWVIF-RQINEPNV-------------------FLWTSMISGCALHGK 340
I MYSK G +++A I R NV W S+ISG + +
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 583
Query: 341 GKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYF------RMMKDVYCINP 394
+ A LF M+ GI P++ T+ V++ C+++ G + DVY
Sbjct: 584 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYI--- 640
Query: 395 GVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH-KNIEMGKWVSEM 453
C+++VD+Y + G L +++ +FE + W + + H K E + M
Sbjct: 641 ----CSTLVDMYSKCGDLHDSR-LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM 695
Query: 454 LLQVAPSDPEAYILLSNMCT 473
+L+ + +I + C
Sbjct: 696 ILENIKPNHVTFISILRACA 715
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/411 (33%), Positives = 213/411 (51%), Gaps = 15/411 (3%)
Query: 72 AERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYE 131
A +LF+ E D ++NIM+ Y+ + EK+ F +P KD SWNT+I G R G
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEM 171
Query: 132 RRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSL 191
+A EL + M+E +EV++ +E +A +++
Sbjct: 172 EKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHF----FKVAPVRGVVAWTAM 223
Query: 192 VEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMV 251
+ Y K + + A + KD+ +N +V WN+M+SGYV N + ED LK FR+M+
Sbjct: 224 ITGYMKAKKVELAEAMFKDMTVN-------KNLVTWNAMISGYVENSRPEDGLKLFRAML 276
Query: 252 HELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLD 311
E + +++ + C+ L+ GRQ+H + K D +SLI MY K G L
Sbjct: 277 EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELG 336
Query: 312 DAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACS 371
DAW +F + + +V W +MISG A HG +A LF M++ I P+ +TF+ V+ AC+
Sbjct: 337 DAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACN 396
Query: 372 HVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVW 431
H GL+ G YF M Y + P +H T MVDL GRAG L E I +V+
Sbjct: 397 HAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVF 456
Query: 432 KSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
+ L +CR+HKN+E+ ++ +E LLQ+ + Y+ L+N+ S +RW++ A
Sbjct: 457 GTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVA 507
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
LFR M +G PN LSS CS LQLG+ +H + ++ + DV + S++ +
Sbjct: 269 LKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISM 328
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV-VSWNTI 121
Y KC A +LFE+ + DVV WN MI Y G+ +K+L +FR + + W T
Sbjct: 329 YCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Query: 122 IDGLIRCGY 130
+ L+ C +
Sbjct: 389 VAVLLACNH 397
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 232/479 (48%), Gaps = 40/479 (8%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF M A G P +++ K + L G+ +HA ++R G+ ++ + I+++Y+
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYV 230
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC A+R+F+ + K V+ ++ G
Sbjct: 231 KCGWLVGAKRVFD-------------------------------QMAVKKPVACTGLMVG 259
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+ G R AL+L +V G E+ F + LGKQ+H V L L +
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ + LV+ Y KC + A +++ R N V W++++SGY ++E+ +
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEI-----REPND---VSWSAIISGYCQMSQFEEAV 371
Query: 245 KTFRSMVHELA-IVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
KTF+S+ + A I++ T T++ AC+ G Q+HA K Y S+LI M
Sbjct: 372 KTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITM 431
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
YSK G LDDA +F ++ P++ WT+ ISG A +G +A LFE M++ G+ PN VTF
Sbjct: 432 YSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTF 491
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
+ V+ ACSH GL+E+G M Y + P ++H M+D+Y R+G L E F+
Sbjct: 492 IAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMP 551
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
WK FLS C HKN+E+G+ E L Q+ P D Y+L N+ T +W+EAA
Sbjct: 552 FEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAA 610
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 196/441 (44%), Gaps = 52/441 (11%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F +EM G + Y+ +F+ C ++L G+ +H M + V+L N +L
Sbjct: 67 AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQ 126
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y +C++ E A++LF+ E + V+ MI AY G ++K++ +F + + +++
Sbjct: 127 MYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM 186
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
L++ RAL + G+Q+H VI L
Sbjct: 187 YTTLLKSLVNPRAL-------------------------------DFGRQIHAHVIRAGL 215
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ I + +V MY KCG A + + + V ++ GY G+
Sbjct: 216 CSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVK--------KPVACTGLMVGYTQAGRAR 267
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
D LK F +V E D + V+ ACA+ L G+Q+HA + K+G + VG+ L+
Sbjct: 268 DALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLV 327
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI-VPNE 360
Y K S + A F++I EPN W+++ISG + ++A F+ + ++ + N
Sbjct: 328 DFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNS 387
Query: 361 VTFLGVINACS-----HVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET 415
T+ + ACS ++G G + +K + E ++++ +Y + GCL +
Sbjct: 388 FTYTSIFQACSVLADCNIG----GQVHADAIKRSLIGSQYGE--SALITMYSKCGCL-DD 440
Query: 416 KNFIFENGISHLTSVWKSFLS 436
N +FE+ + W +F+S
Sbjct: 441 ANEVFESMDNPDIVAWTAFIS 461
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 133 RALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLV 192
A E L M + G S ++ + G+ LH R+ N + + ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 193 EMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVH 252
+MYC+C + A + ++ + V +M+S Y G + + F M+
Sbjct: 126 QMYCECRSLEDADKLFDEM--------SELNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 253 ELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDD 312
TT++ + N L+FGRQ+HA++ + G + + + +++MY K G L
Sbjct: 178 SGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVG 237
Query: 313 AWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSH 372
A +F Q+ T ++ G G+ + A LF ++ +G+ + F V+ AC+
Sbjct: 238 AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACAS 297
Query: 373 VGLLEEG 379
+ L G
Sbjct: 298 LEELNLG 304
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 232/451 (51%), Gaps = 8/451 (1%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+F +M P +T+SSV CS L++GK +HA ++ V AD V+ S+ D+Y+
Sbjct: 250 MFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYV 309
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC E A R+F+ T D+ +W + Y +G ++ ++F +P +++VSWN ++ G
Sbjct: 310 KCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGG 369
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+ AL+ L M + VT V++GKQ HG + + +
Sbjct: 370 YVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTN 429
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ ++L++MY KCG A++ + ++ LR V WN++++G G+ E L
Sbjct: 430 VIVANALLDMYGKCGTLQSANIWFRQ--MSELRDE-----VSWNALLTGVARVGRSEQAL 482
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMY 304
F M E A T+ T+++ CAN L G+ +H ++ + G++ID + +++ MY
Sbjct: 483 SFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMY 541
Query: 305 SKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFL 364
SK D A +F++ ++ LW S+I GC +G+ K+ LF + N+G+ P+ VTFL
Sbjct: 542 SKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFL 601
Query: 365 GVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGI 424
G++ AC G +E G YF M Y I+P VEH M++LY + GCL + + F+
Sbjct: 602 GILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPF 661
Query: 425 SHLTSVWKSFLSSCRLHKNIEMGKWVSEMLL 455
+ +C+ ++ ++G W ++ L+
Sbjct: 662 DPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 217/463 (46%), Gaps = 62/463 (13%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
VF +FR M G + + + V K C +L+L + +H +++ G +V L SI+D
Sbjct: 146 VFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVD 205
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN-T 120
+Y KC+ A R+F+ V+WN+++R YL G ++++ MF + +V N T
Sbjct: 206 VYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHT 265
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+ ++ C R+L L E+GK +H + L+
Sbjct: 266 VSSVMLACS---RSLAL-----------------------------EVGKVIHAIAVKLS 293
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSG------------------ 222
+ D +++S+ +MY KC R + A + L++ S
Sbjct: 294 VVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFD 353
Query: 223 -----GIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEF 277
IV WN+M+ GYV ++++ L M E+ +D T+ +++ C+ ++
Sbjct: 354 LMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQM 413
Query: 278 GRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE-PNVFLWTSMISGCA 336
G+Q H +I + G+ + V ++L+ MY K G+L A + FRQ++E + W ++++G A
Sbjct: 414 GKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVA 473
Query: 337 LHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG-STYFRMMKDVYCINPG 395
G+ +QA S FEGM + P++ T ++ C+++ L G + + +++D Y I+
Sbjct: 474 RVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVV 532
Query: 396 VEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSC 438
+ +MVD+Y + C + +F+ + +W S + C
Sbjct: 533 IR--GAMVDMYSKCRCF-DYAIEVFKEAATRDLILWNSIIRGC 572
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 183/418 (43%), Gaps = 49/418 (11%)
Query: 88 NIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTE 147
N I AY G V+ + ++F +P +D SWN +I + G + M +G
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 148 FSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVI 207
+E +F + L +QLH V+ +G+ + +S+V++Y KC A +
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 208 LKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDI-RTVTTVI 266
++ + V WN +V Y+ G ++ + F M+ EL + + TV++V+
Sbjct: 220 FDEIV--------NPSDVSWNVIVRRYLEMGFNDEAVVMFFKML-ELNVRPLNHTVSSVM 270
Query: 267 SACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVF 326
AC+ + LE G+ +HA K+ D V +S+ MY K L+ A +F Q ++
Sbjct: 271 LACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLK 330
Query: 327 LWTSMISGCALHGKGKQASSLFEGMLNQGIVP---------------------------- 358
WTS +SG A+ G ++A LF+ M + IV
Sbjct: 331 SWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEI 390
Query: 359 ---NEVTFLGVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIE 414
+ VT + ++N CS + ++ G + + + Y N V + +++D+YG+ G L +
Sbjct: 391 ENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVAN--ALLDMYGKCGTL-Q 447
Query: 415 TKNFIFENGISHLTS--VWKSFLSS-CRLHKNIEMGKWVSEMLLQVAPSDPEAYILLS 469
+ N F +S L W + L+ R+ ++ + + M ++ PS LL+
Sbjct: 448 SANIWFRQ-MSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLA 504
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 132/317 (41%), Gaps = 21/317 (6%)
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
+++ ++T + F+ + +E Y KCG D A + +++P R G S WN
Sbjct: 80 ARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPE---RDGGS-----WN 131
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
++++ NG ++ + FR M + + V+ +C L RQ+H + K
Sbjct: 132 AVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKY 191
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
G+ + + +S++ +Y K + DA +F +I P+ W ++ G +A +F
Sbjct: 192 GYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMF 251
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGR 408
ML + P T V+ ACS LE G + + + V TS+ D+Y +
Sbjct: 252 FKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS-TSVFDMYVK 310
Query: 409 AGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILL 468
L E+ +F+ S W S +S + + + +++ PE I+
Sbjct: 311 CDRL-ESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLM-------PERNIVS 362
Query: 469 SNMC----TSNHRWDEA 481
N H WDEA
Sbjct: 363 WNAMLGGYVHAHEWDEA 379
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 265 VISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPN 324
+ +C++ L+ R++ +++ ++ + I Y K G +DDA +F ++ E +
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 325 VFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFR 384
W ++I+ CA +G + +F M G+ E +F GV+ +C GL+ + R
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILD----LR 179
Query: 385 MMKDVYCI------NPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSC 438
+++ ++C + V+ TS+VD+YG+ + + + +F+ ++ W
Sbjct: 180 LLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARR-VFDEIVNPSDVSWNVI---- 234
Query: 439 RLHKNIEMG 447
+ + +EMG
Sbjct: 235 -VRRYLEMG 242
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 242/479 (50%), Gaps = 40/479 (8%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
S+F +M G + T+ SVF C+ + + LG+ VH+ ++ + N++LD+
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC GD++ + +FR + + VVS+ ++I
Sbjct: 341 YSKC-------------------------------GDLDSAKAVFREMSDRSVVSYTSMI 369
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G R G A++L M E G T ++ GK++H + L
Sbjct: 370 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 429
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
D F++++L++MY KCG +A ++ ++ + I+ WN+++ GY N +
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVK--------DIISWNTIIGGYSKNCYANE 481
Query: 243 CLKTFRSMVHELAIV-DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
L F ++ E D RTV V+ ACA+ + GR++H YI + G+ D +V +SL+
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
MY+K G+L A ++F I ++ WT MI+G +HG GK+A +LF M GI +E+
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 601
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
+F+ ++ ACSH GL++EG +F +M+ I P VEH +VD+ R G LI+ FI
Sbjct: 602 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 661
Query: 422 NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
I ++W + L CR+H ++++ + V+E + ++ P + Y+L++N+ +W++
Sbjct: 662 MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQ 720
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 190/422 (45%), Gaps = 53/422 (12%)
Query: 20 TLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELT 79
TL SV + C+ K+L+ GK V ++ NG D L + + +Y C + A R+F+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 80 GEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLF 139
+ WNI++ +GD S+ +F+
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKK------------------------------ 185
Query: 140 CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG 199
M+ +G E TF V G+QLHG ++ N + +SLV Y K
Sbjct: 186 -MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQ 244
Query: 200 RTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDI 259
R D A + ++ ++ WNS+++GYV NG E L F M+ +D+
Sbjct: 245 RVDSARKVFDEM--------TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDL 296
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
T+ +V + CA++ L+ GR +H+ K + ++L+ MYSK G LD A +FR+
Sbjct: 297 ATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFRE 356
Query: 320 INEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
+++ +V +TSMI+G A G +A LFE M +GI P+ T V+N C+ LL+EG
Sbjct: 357 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
Query: 380 STYFRMMK------DVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKS 433
+K D++ N +++D+Y + G + E + E + + S W +
Sbjct: 417 KRVHEWIKENDLGFDIFVSN-------ALMDMYAKCGSMQEAELVFSEMRVKDIIS-WNT 468
Query: 434 FL 435
+
Sbjct: 469 II 470
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 212/439 (48%), Gaps = 44/439 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF++M + G + YT S V K S+ +++ G+ +H ++L++G + NS++ YL
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
K + + A ++F+ + +DV+SWN+II+G
Sbjct: 242 KNQRVDSARKVFD-------------------------------EMTERDVISWNSIING 270
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+ G + L + M+ +G E T + LG+ +H + + +
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ ++L++MY KCG D A + +++ + +V + SM++GY G + +
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREM--------SDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMY 304
K F M E D+ TVT V++ CA LL+ G+++H +I++ D +V ++L+ MY
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 305 SKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG-IVPNEVTF 363
+K GS+ +A ++F ++ ++ W ++I G + + +A SLF +L + P+E T
Sbjct: 443 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 364 LGVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
V+ AC+ + ++G + +M++ Y + V S+VD+Y + G L+ + +F++
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV--ANSLVDMYAKCGALL-LAHMLFDD 559
Query: 423 GISHLTSVWKSFLSSCRLH 441
S W ++ +H
Sbjct: 560 IASKDLVSWTVMIAGYGMH 578
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%)
Query: 257 VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVI 316
+D RT+ +V+ CA++ L+ G+++ +I+ G ID+ +GS L MY+ G L +A +
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 317 FRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
F ++ W +++ A G + LF+ M++ G+ + TF
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 248/524 (47%), Gaps = 54/524 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNL---------QLGKGVHAWMLRNGVDADVVL 55
+FR M KG + LS++ + + +LGK +H LR G D+ L
Sbjct: 227 MFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHL 286
Query: 56 VNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAY--------------------- 94
NS+L++Y K K AE +F E +VV+WNIMI +
Sbjct: 287 NNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGF 346
Query: 95 ----------LGA----GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFC 140
LGA GDVE +F ++P V +WN ++ G + A+
Sbjct: 347 QPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 141 MVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGR 200
M + + T +E GKQ+HG VI ++ ++ I S L+ +Y +C +
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 466
Query: 201 TDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIV--D 258
+ + I D N I WNSM+SG+ N L FR M H+ A++ +
Sbjct: 467 MEISECIFDDCI-------NELDIACWNSMISGFRHNMLDTKALILFRRM-HQTAVLCPN 518
Query: 259 IRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFR 318
+ TV+S+C+ L GRQ H + K G+ D++V ++L MY K G +D A F
Sbjct: 519 ETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFD 578
Query: 319 QINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEE 378
+ N +W MI G +G+G +A L+ M++ G P+ +TF+ V+ ACSH GL+E
Sbjct: 579 AVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVET 638
Query: 379 GSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSC 438
G M+ ++ I P ++H +VD GRAG L + + + +W+ LSSC
Sbjct: 639 GLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSC 698
Query: 439 RLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
R+H ++ + + V+E L+++ P AY+LLSN +S +WD++A
Sbjct: 699 RVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSA 742
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 217/457 (47%), Gaps = 27/457 (5%)
Query: 17 NQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLF 76
N+Y L+S+ +C E+ GK +H +++R G+ +D L N +LDLY++C +YA ++F
Sbjct: 6 NKY-LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVF 64
Query: 77 ELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALE 136
+ DV +WN + GD+ ++ ++F +P +DVVSWN +I L+R G+E +AL
Sbjct: 65 DEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALV 124
Query: 137 LLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYC 196
+ MV +G S T G + HG + L+ + F+ ++L+ MY
Sbjct: 125 VYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYA 184
Query: 197 KCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI 256
KCG + D + + + + V + +++ G K + ++ FR M +
Sbjct: 185 KCG-------FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQ 237
Query: 257 VDIRTVTTVIS------ACANAGLL---EFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKS 307
VD ++ ++S C + + E G+Q+H ++G D ++ +SL+ +Y+K+
Sbjct: 238 VDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKN 297
Query: 308 GSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVI 367
++ A +IF ++ E NV W MI G + ++ M + G PNEVT + V+
Sbjct: 298 KDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVL 357
Query: 368 NACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET----KNFIFENG 423
AC G +E G F + P V +M+ Y E + F+N
Sbjct: 358 GACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNL 412
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPS 460
T++ LSSC + +E GK + ++++ S
Sbjct: 413 KPDKTTL-SVILSSCARLRFLEGGKQIHGVVIRTEIS 448
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 162/354 (45%), Gaps = 45/354 (12%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
S FR+MQ + P++ TLS + C+ + L+ GK +H ++R + + +V+ ++ +Y
Sbjct: 402 SNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVY 461
Query: 64 LKCKAFEYAERLF-ELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
+C+ E +E +F + E D+ WN MI + K+L +FR + V+ N
Sbjct: 462 SECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPN--- 518
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
E +F + G+Q HG V+
Sbjct: 519 ---------------------------ETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYV 551
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
D+F+ ++L +MYCKCG D A V LR V WN M+ GY NG+ ++
Sbjct: 552 SDSFVETALTDMYCKCGEIDSARQFFDAV----LRKNT----VIWNEMIHGYGHNGRGDE 603
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG---HRIDAYVGSS 299
+ +R M+ D T +V++AC+++GL+E G ++ + +Q+I +D Y+
Sbjct: 604 AVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYI--C 661
Query: 300 LIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGML 352
++ ++G L+DA + + + LW ++S C +HG A + E ++
Sbjct: 662 IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLM 715
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 183/437 (41%), Gaps = 69/437 (15%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+++ M G P+++TL+SV CS + G H ++ G+D ++ + N++L +Y
Sbjct: 125 VYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYA 184
Query: 65 KCK-AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
KC +Y R+FE + + V++ +I V +++ MFR + K V + +
Sbjct: 185 KCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLS 244
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
++ R + L + N ELGKQ+H + L G
Sbjct: 245 NILSISAPREGCDSLSEIYGN----------------------ELGKQIHCLALRLGFGG 282
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
D +N+SL+E+Y K + A +I ++P +V WN M+ G+ + +
Sbjct: 283 DLHLNNSLLEIYAKNKDMNGAELIFAEMP--------EVNVVSWNIMIVGFGQEYRSDKS 334
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
++ M + T +V+ AC +G +E GR+
Sbjct: 335 VEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRR----------------------- 371
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
IF I +P+V W +M+SG + + ++A S F M Q + P++ T
Sbjct: 372 ------------IFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTL 419
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
++++C+ + LE G ++ I+ + ++ +Y +E IF++
Sbjct: 420 SVILSSCARLRFLEGGKQIHGVVIRTE-ISKNSHIVSGLIAVYSECE-KMEISECIFDDC 477
Query: 424 ISHL-TSVWKSFLSSCR 439
I+ L + W S +S R
Sbjct: 478 INELDIACWNSMISGFR 494
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 233/488 (47%), Gaps = 48/488 (9%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
++EM KG P+ +T V K CS +++Q G VH ++++ G + ++ + +L +Y+
Sbjct: 94 FYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYM 153
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
C G+V L +F ++P +VV+W ++I G
Sbjct: 154 CC-------------------------------GEVNYGLRVFEDIPQWNVVAWGSLISG 182
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN-- 182
+ A+E M NG + +E + GK HG + L +
Sbjct: 183 FVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPY 242
Query: 183 -----GDNFI-NSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
G N I +SL++MY KCG A + +P L V WNS+++GY
Sbjct: 243 FQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTL--------VSWNSIITGYSQ 294
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
NG E+ L F M+ D T +VI A G + G+ +HAY+ K G DA +
Sbjct: 295 NGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAI 354
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG- 355
+L++MY+K+G + A F + + + WT +I G A HG G +A S+F+ M +G
Sbjct: 355 VCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGN 414
Query: 356 IVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET 415
P+ +T+LGV+ ACSH+GL+EEG YF M+D++ + P VEH MVD+ RAG E
Sbjct: 415 ATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEA 474
Query: 416 KNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSN 475
+ + + ++W + L+ C +H+N+E+ + M+ + Y+LLSN+
Sbjct: 475 ERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKA 534
Query: 476 HRWDEAAM 483
RW + +
Sbjct: 535 GRWADVKL 542
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 148/336 (44%), Gaps = 22/336 (6%)
Query: 106 MFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXX 165
+F ++ V WN++I G +AL M+ G TF
Sbjct: 63 VFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRD 122
Query: 166 VELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIV 225
++ G +HG V+ + ++++ L+ MY CG + + +D+P +V
Sbjct: 123 IQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP--------QWNVV 174
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI 285
W S++SG+V N ++ D ++ FR M + + ++ AC + G+ H ++
Sbjct: 175 AWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL 234
Query: 286 QKIGHRIDAY----------VGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGC 335
Q +G D Y + +SLI MY+K G L A +F + E + W S+I+G
Sbjct: 235 QGLG--FDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGY 292
Query: 336 ALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPG 395
+ +G ++A +F ML+ GI P++VTFL VI A G + G + + +
Sbjct: 293 SQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDA 352
Query: 396 VEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVW 431
C ++V++Y + G E+ FE+ T W
Sbjct: 353 AIVC-ALVNMYAKTGD-AESAKKAFEDLEKKDTIAW 386
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 233/468 (49%), Gaps = 39/468 (8%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
P+ T+SSV + C ++L L K ++ +ML+ G + + N ++D+Y KC
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKC--------- 355
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
GD++T + D+F ++ KD VSWN+II G I+ G A+
Sbjct: 356 ------GDMIT----------------ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 136 ELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMY 195
+L M+ + +T+ ++ GK LH I + D ++++L++MY
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY 453
Query: 196 CKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELA 255
KCG + L + + +G V WN+++S V G + L+ M
Sbjct: 454 AKCGEVGDS--------LKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEV 505
Query: 256 IVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWV 315
+ D+ T + CA+ G+++H + + G+ + +G++LI MYSK G L+++
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSR 565
Query: 316 IFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGL 375
+F +++ +V WT MI ++G+G++A F M GIVP+ V F+ +I ACSH GL
Sbjct: 566 VFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGL 625
Query: 376 LEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFL 435
++EG F MK Y I+P +EH +VDL R+ + + + FI I S+W S L
Sbjct: 626 VDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVL 685
Query: 436 SSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAAM 483
+CR ++E + VS ++++ P DP IL SN + +WD+ ++
Sbjct: 686 RACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSL 733
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 212/475 (44%), Gaps = 47/475 (9%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+ +++ P++YT SV K C+ + ++G V+ +L G ++D+ + N+++D+
Sbjct: 91 LEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDM 150
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y G + ++ +F +P +D+VSWN++I
Sbjct: 151 -------------------------------YSRMGLLTRARQVFDEMPVRDLVSWNSLI 179
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G GY ALE+ + + T V+ G+ LHG + +N
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+N+ LV MY K R A + ++ + V +N+M+ GY+ E+
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR--------DSVSYNTMICGYLKLEMVEE 291
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
++ F + + D+ TV++V+ AC + L + ++ Y+ K G +++ V + LI
Sbjct: 292 SVRMFLENLDQFK-PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILID 350
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
+Y+K G + A +F + + W S+ISG G +A LF+ M+ + +T
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 363 FLGVINACSHVGLLEEGS-TYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
+L +I+ + + L+ G + +K CI+ V + +++D+Y + G + ++ IF
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLK-IFS 467
Query: 422 NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLL--QVAPSDPEAYILLSNMCTS 474
+ + T W + +S+C + G V+ + +V P D +++ MC S
Sbjct: 468 SMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVP-DMATFLVTLPMCAS 521
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 181/387 (46%), Gaps = 15/387 (3%)
Query: 90 MIRAYLGAGDVEKSLDMFRNL-PSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEF 148
+I Y + SL +FR + P+K+V WN+II + G ALE + E+
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 149 SEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVIL 208
+ TF E+G ++ +++ + D F+ ++LV+MY + G +A +
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 209 KDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISA 268
++P+ +V WNS++SGY +G YE+ L+ + + + + D TV++V+ A
Sbjct: 165 DEMPVR--------DLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPA 216
Query: 269 CANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLW 328
N +++ G+ +H + K G V + L+ MY K DA +F +++ + +
Sbjct: 217 FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSY 276
Query: 329 TSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGS-TYFRMMK 387
+MI G +++ +F L+Q P+ +T V+ AC H+ L Y M+K
Sbjct: 277 NTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Query: 388 DVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNI-EM 446
+ + V + ++D+Y + G +I ++ +F + T W S +S ++ E
Sbjct: 336 AGFVLESTVRNI--LIDVYAKCGDMITARD-VFNSMECKDTVSWNSIISGYIQSGDLMEA 392
Query: 447 GKWVSEMLLQVAPSDPEAYILLSNMCT 473
K M++ +D Y++L ++ T
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVST 419
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 144/343 (41%), Gaps = 43/343 (12%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF+ M + T + + +L+ GKG+H+ +++G+ D+ + N+++D+Y
Sbjct: 395 LFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYA 454
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC + ++F G GD VTWN +I A + GD L + + +VV
Sbjct: 455 KCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVP------- 507
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
TF LGK++H ++ +
Sbjct: 508 ------------------------DMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESE 543
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
I ++L+EMY KCG + +S + + + + +V W M+ Y G+ E L
Sbjct: 544 LQIGNALIEMYSKCGCLENSSRVFERM--------SRRDVVTWTGMIYAYGMYGEGEKAL 595
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVG--SSLIH 302
+TF M + D +I AC+++GL++ G + K ++ID + + ++
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM-KTHYKIDPMIEHYACVVD 654
Query: 303 MYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQA 344
+ S+S + A + + +P+ +W S++ C G + A
Sbjct: 655 LLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETA 697
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
+++H VI+L L+ +F + L++ Y + + + R + + WNS
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFR-------RVSPAKNVYLWNS 76
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG 289
++ + NG + + L+ + + D T +VI ACA E G ++ I +G
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 290 HRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFE 349
D +VG++L+ MYS+ G L A +F ++ ++ W S+ISG + HG ++A ++
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196
Query: 350 GMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
+ N IVP+ T V+ A ++ ++++G
Sbjct: 197 ELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 231/492 (46%), Gaps = 60/492 (12%)
Query: 17 NQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKA---FEYAE 73
N Y S + CS ++ L K +HA ML+ G+ D + L + + YA+
Sbjct: 13 NLYETMSCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQ 69
Query: 74 RLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERR 133
+F+ D WN+MIR + + + E+SL +++ + L++
Sbjct: 70 IVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA----- 124
Query: 134 ALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVE 193
N + F E T Q+H ++ L D + +SL+
Sbjct: 125 --------CSNLSAFEETT------------------QIHAQITKLGYENDVYAVNSLIN 158
Query: 194 MYCKCGRTDKASVILKDVP-----------------------LNLLRTGNSGGIVPWNSM 230
Y G A ++ +P L L R + W +M
Sbjct: 159 SYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTM 218
Query: 231 VSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGH 290
+SGYV ++ L+ F M + D ++ +SACA G LE G+ +H+Y+ K
Sbjct: 219 ISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRI 278
Query: 291 RIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEG 350
R+D+ +G LI MY+K G +++A +F+ I + +V WT++ISG A HG G++A S F
Sbjct: 279 RMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFME 338
Query: 351 MLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAG 410
M GI PN +TF V+ ACS+ GL+EEG F M+ Y + P +EH +VDL GRAG
Sbjct: 339 MQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAG 398
Query: 411 CLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSN 470
L E K FI E + +W + L +CR+HKNIE+G+ + E+L+ + P Y+ +N
Sbjct: 399 LLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKAN 458
Query: 471 MCTSNHRWDEAA 482
+ + +WD+AA
Sbjct: 459 IHAMDKKWDKAA 470
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 167/338 (49%), Gaps = 14/338 (4%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
L++ M A N YT S+ K CS + +HA + + G + DV VNS+++ Y
Sbjct: 102 LYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYA 161
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
F+ A LF+ E D V+WN +I+ Y+ AG ++ +L +FR + K+ +SW T+I G
Sbjct: 162 VTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISG 221
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
++ + AL+L M + E V+ +E GK +H + + D
Sbjct: 222 YVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMD 281
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ + L++MY KCG ++A + K++ + W +++SGY ++G + +
Sbjct: 282 SVLGCVLIDMYAKCGEMEEALEVFKNI--------KKKSVQAWTALISGYAYHGHGREAI 333
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRIDAYVGSSLI 301
F M ++ T T V++AC+ GL+E G+ + +++ + I+ Y ++
Sbjct: 334 SKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY--GCIV 391
Query: 302 HMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
+ ++G LD+A +++ +PN +W +++ C +H
Sbjct: 392 DLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/506 (29%), Positives = 248/506 (49%), Gaps = 27/506 (5%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LFREM+ G N+ TL++V CS + + + + ++ ++ V + ++L +Y
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYC 219
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
C + A +LF+ E ++VTWN+M+ Y AG +E++ ++F + KD+VSW T+IDG
Sbjct: 220 LCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDG 279
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+R AL M+ G + SEV G QLHG ++ +
Sbjct: 280 CLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCY 339
Query: 185 NFINSSLVEMYCKCGRTD------KASVILKDVPLNLLRTG-----------------NS 221
+F+ ++++ Y +ASV N L G +
Sbjct: 340 DFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD 399
Query: 222 GGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQ 280
I WN+M+SGY + + L FR M+ + D T+ +V SA ++ G LE G++
Sbjct: 400 KDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKR 459
Query: 281 MHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ---INEPNVFLWTSMISGCAL 337
H Y+ + + +++I MY+K GS++ A IF Q I+ + W ++I G A
Sbjct: 460 AHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSAT 519
Query: 338 HGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVE 397
HG K A L+ + + I PN +TF+GV++AC H GL+E G TYF MK + I P ++
Sbjct: 520 HGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIK 579
Query: 398 HCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQV 457
H MVDL G+AG L E K I + + +W LS+ R H N+E+ + + L +
Sbjct: 580 HYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAI 639
Query: 458 APSDPEAYILLSNMCTSNHRWDEAAM 483
PS ++LSN+ RW++ A+
Sbjct: 640 DPSHGGCKVMLSNVYADAGRWEDVAL 665
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 124/522 (23%), Positives = 223/522 (42%), Gaps = 74/522 (14%)
Query: 17 NQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLF 76
+ L S C++ ++ G+ +H +L++G+D++ + NS+L++Y KC+ AE +F
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 77 ELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALE 136
+ D ++NIM+ Y+ + + +L +F +P + VS+ T+I G + A+E
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAME 159
Query: 137 LLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYC 196
L M G +EVT + + L I L L G F++++L+ MYC
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYC 219
Query: 197 KCGRTDKASVILKDVPLNLLRTGN-----------------------SGGIVPWNSMVSG 233
C A + ++P L T N IV W +M+ G
Sbjct: 220 LCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDG 279
Query: 234 YVWNGKYEDCLKTFRSMVH------ELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK 287
+ + ++ L + M+ E+ +VD+ +SA A + G Q+H I K
Sbjct: 280 CLRKNQLDEALVYYTEMLRCGMKPSEVMMVDL------LSASARSVGSSKGLQLHGTIVK 333
Query: 288 IGHRIDAYVGSSLIHMYS-------------------------------KSGSLDDAWVI 316
G ++ +++IH Y+ K+G ++ A +
Sbjct: 334 RGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREV 393
Query: 317 FRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV-PNEVTFLGVINACSHVGL 375
F Q ++ ++F W +MISG A + A LF M++ V P+ +T + V +A S +G
Sbjct: 394 FDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGS 453
Query: 376 LEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF---ENGISHLTSVWK 432
LEEG + + I P +++D+Y + G IET IF +N S S W
Sbjct: 454 LEEGKRAHDYL-NFSTIPPNDNLTAAIIDMYAKCGS-IETALNIFHQTKNISSSTISPWN 511
Query: 433 SFL--SSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMC 472
+ + S+ H + + + L + P+ +LS C
Sbjct: 512 AIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACC 553
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/480 (29%), Positives = 234/480 (48%), Gaps = 39/480 (8%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+ F EM + YT + K C+ + ++ GK +H ++ G + + NS+ +
Sbjct: 194 LTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATM 253
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y +C G+++ L +F N+ +DVVSW ++I
Sbjct: 254 YTEC-------------------------------GEMQDGLCLFENMSERDVVSWTSLI 282
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
R G E +A+E M + +E TF + G+QLH V++L LN
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+++S+++MY CG ASV+ + + I+ W++++ GY G E+
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR--------DIISWSTIIGGYCQAGFGEE 394
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
K F M + +++S N ++E GRQ+HA G ++ V SSLI+
Sbjct: 395 GFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLIN 454
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MYSK GS+ +A +IF + + ++ T+MI+G A HGK K+A LFE L G P+ VT
Sbjct: 455 MYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVT 514
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
F+ V+ AC+H G L+ G YF MM++ Y + P EH MVDL RAG L + + I E
Sbjct: 515 FISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEM 574
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
VW + L +C+ +IE G+ +E +L++ P+ A + L+N+ +S +EAA
Sbjct: 575 SWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAA 634
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 149/334 (44%), Gaps = 23/334 (6%)
Query: 88 NIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCM--VENG 145
N +R+ + AG++ + +F +P D+VSW +II + AL L M V++
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 146 TEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKAS 205
+ G+ LH + +L ++ SSL++MY + G+ DK+
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 206 VILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTV 265
+ ++P V W ++++G V G+Y++ L F M + D T
Sbjct: 164 RVFSEMPFR--------NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA 215
Query: 266 ISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNV 325
+ ACA +++G+ +H ++ G V +SL MY++ G + D +F ++E +V
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 326 FLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRM 385
WTS+I G+ +A F M N + PNE TF + +AC+ + L G
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWG------ 329
Query: 386 MKDVYC------INPGVEHCTSMVDLYGRAGCLI 413
+ ++C +N + SM+ +Y G L+
Sbjct: 330 -EQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLV 362
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 175/415 (42%), Gaps = 43/415 (10%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
++FS R + P+ LS V K C N+ G+ +HA+ ++ + + V + +S+L
Sbjct: 92 ILFSAMRVVD-HAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLL 150
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
D+Y + G ++KS +F +P ++ V+W
Sbjct: 151 DMYKR-------------------------------VGKIDKSCRVFSEMPFRNAVTWTA 179
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEV-TFXXXXXXXXXXXXVELGKQLHGRVITL 179
II GL+ G + L F + E S+ TF V+ GK +H VI
Sbjct: 180 IITGLVHAGRYKEGLT-YFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVR 238
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
+ +SL MY +CG L L + +V W S++ Y G+
Sbjct: 239 GFVTTLCVANSLATMYTECGEMQDG--------LCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
++TF M + + +T ++ SACA+ L +G Q+H + +G V +S
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS 350
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
++ MYS G+L A V+F+ + ++ W+++I G G G++ F M G P
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPT 410
Query: 360 EVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIE 414
+ +++ ++ ++ EG + + + +S++++Y + G + E
Sbjct: 411 DFALASLLSVSGNMAVI-EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKE 464
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 167/385 (43%), Gaps = 44/385 (11%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
F +M+ PN+ T +S+F C++ L G+ +H +L G++ + + NS++ +Y
Sbjct: 298 FIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYST 357
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL 125
C A LF+ D+++W+ +I Y AG E+ F SW
Sbjct: 358 CGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYF---------SW------- 401
Query: 126 IRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDN 185
M ++GT+ ++ +E G+Q+H + L ++
Sbjct: 402 ---------------MRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNS 446
Query: 186 FINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLK 245
+ SSL+ MY KCG +AS+I + + IV +M++GY +GK ++ +
Sbjct: 447 TVRSSLINMYSKCGSIKEASMIFGET--------DRDDIVSLTAMINGYAEHGKSKEAID 498
Query: 246 TFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI-GHRIDAYVGSSLIHMY 304
F + D T +V++AC ++G L+ G +Q+ R ++ +
Sbjct: 499 LFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLL 558
Query: 305 SKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
++G L DA + +++ + + +WT+++ C G ++ E +L + P T
Sbjct: 559 CRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILE--LDPTCATA 616
Query: 364 LGVI-NACSHVGLLEEGSTYFRMMK 387
L + N S G LEE + + MK
Sbjct: 617 LVTLANIYSSTGNLEEAANVRKNMK 641
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/507 (28%), Positives = 244/507 (48%), Gaps = 30/507 (5%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
+LF +++ A P+ Y+ +++ C++ N++ G+ + + ++R+G A + + NS++D+Y
Sbjct: 56 ALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMY 115
Query: 64 LKCKAFEYAERLFE--LTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
KC A ++F + VTW ++ AY+ A E +LD+F +P + +WN +
Sbjct: 116 GKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIM 175
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXX-XXXXXXVELGKQLHGRVITLA 180
I G CG L L M+E+ + TF V G+ +H ++
Sbjct: 176 ISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNG 235
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDV-----------------------PLNLLR 217
+ +S++ Y K G D A L+ + L +
Sbjct: 236 WSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFH 295
Query: 218 TGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEF 277
IV W +M++GY NG E L+ F M+ D V+ AC+ LL
Sbjct: 296 LAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGH 355
Query: 278 GRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCAL 337
G+ +H + G + AYVG++L+++Y+K G + +A F I ++ W +M+ +
Sbjct: 356 GKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGV 415
Query: 338 HGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVE 397
HG QA L++ M+ GI P+ VTF+G++ CSH GL+EEG F M Y I V+
Sbjct: 416 HGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVD 475
Query: 398 HCTSMVDLYGRAGCLIETKNFIFENGI----SHLTSVWKSFLSSCRLHKNIEMGKWVSEM 453
H T M+D++GR G L E K+ S S W++ L +C H + E+G+ VS++
Sbjct: 476 HVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKV 535
Query: 454 LLQVAPSDPEAYILLSNMCTSNHRWDE 480
L PS+ +++LLSN+ S RW E
Sbjct: 536 LKIAEPSEEMSFVLLSNLYCSTGRWKE 562
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 184/395 (46%), Gaps = 24/395 (6%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEK-NLQLGKGVHAWMLRNGVDADVVLVNSILD 61
SLF+EM P+ YT SS+ CSA+ N+ G+ VHA ML+NG + V NS+L
Sbjct: 189 LSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLS 248
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
Y K + + A R E V+WN +I A + G+ EK+L++F P K++V+W T+
Sbjct: 249 FYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTM 308
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
I G R G +AL M+++G + + + GK +HG +I
Sbjct: 309 ITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGF 368
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
G ++ ++LV +Y KCG +A D+ + +V WN+M+ + +G +
Sbjct: 369 QGYAYVGNALVNLYAKCGDIKEADRAFGDIA--------NKDLVSWNTMLFAFGVHGLAD 420
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVG--SS 299
LK + +M+ D T +++ C+++GL+E G + + K +RI V +
Sbjct: 421 QALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVK-DYRIPLEVDHVTC 479
Query: 300 LIHMYSKSGSLDDAWVIFRQ-----INEPNVFLWTSMISGCALHGK---GKQASSLFEGM 351
+I M+ + G L +A + + N W +++ C+ H G++ S +
Sbjct: 480 MIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKV---- 535
Query: 352 LNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM 386
L E++F+ + N G +EG R M
Sbjct: 536 LKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREM 570
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 184/452 (40%), Gaps = 62/452 (13%)
Query: 91 IRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSE 150
I + +G + + +F +P D V+WNT++ R G + A+ L + + + +
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 151 VTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKD 210
+F V+ G+++ VI +N+SL++MY KC T A+ + +D
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 211 V-------------------------PLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLK 245
+ L++ WN M+SG+ GK E CL
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 246 TFRSMVHELAIVDIRTVTTVISAC-ANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMY 304
F+ M+ D T +++++AC A++ + +GR +HA + K G +S++ Y
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFY 250
Query: 305 SKSGSLDDA--------------W-----------------VIFRQINEPNVFLWTSMIS 333
+K GS DDA W +F E N+ WT+MI+
Sbjct: 251 TKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMIT 310
Query: 334 GCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCIN 393
G +G G+QA F M+ G+ + + V++ACS + LL G + ++C
Sbjct: 311 GYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL--IHCGF 368
Query: 394 PGVEHC-TSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMG-KWVS 451
G + ++V+LY + G + E + L S W + L + +H + K
Sbjct: 369 QGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVS-WNTMLFAFGVHGLADQALKLYD 427
Query: 452 EMLLQVAPSDPEAYILLSNMCTSNHRWDEAAM 483
M+ D +I L C+ + +E M
Sbjct: 428 NMIASGIKPDNVTFIGLLTTCSHSGLVEEGCM 459
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/492 (29%), Positives = 245/492 (49%), Gaps = 57/492 (11%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNG-VDADVVLVNSILDLYL 64
REM +G P+++T+SSV CS + L+ GK +HA+ L+NG +D + + ++++D+Y
Sbjct: 290 LREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC 349
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
CK R+F+ MF + + WN +I G
Sbjct: 350 NCKQVLSGRRVFD---------------------------GMF----DRKIGLWNAMIAG 378
Query: 125 LIRCGYERRALELLFCMVEN-GTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
+ +++ AL L M E+ G + T + +HG V+ L+
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 438
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
D F+ ++L++MY + G+ D A I + +V WN+M++GYV++ +ED
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKM--------EDRDLVTWNTMITGYVFSEHHEDA 490
Query: 244 LKTF-------RSMVHELAIVDIR----TVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
L R + + V ++ T+ T++ +CA L G+++HAY K
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGML 352
D VGS+L+ MY+K G L + +F QI + NV W +I +HG G++A L M+
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 353 NQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCL 412
QG+ PNEVTF+ V ACSH G+++EG F +MK Y + P +H +VDL GRAG +
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 670
Query: 413 IETKNFIFENGIS---HLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLS 469
E + N + + W S L + R+H N+E+G+ ++ L+Q+ P+ Y+LL+
Sbjct: 671 KEAYQLM--NMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLA 728
Query: 470 NMCTSNHRWDEA 481
N+ +S WD+A
Sbjct: 729 NIYSSAGLWDKA 740
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 218/501 (43%), Gaps = 67/501 (13%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCS---AEKNLQLGKGVHAWMLRNGVDADVVLVN 57
M FR M + P+ +TL SV CS + L +GK VHA+ LR G + + ++N
Sbjct: 182 MALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIIN 240
Query: 58 SILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVS 117
+++ +Y K G + + +++ ++ G +D+V+
Sbjct: 241 TLVAMYGKL---------------GKLASSKVLLGSFGG----------------RDLVT 269
Query: 118 WNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
WNT++ L + ALE L MV G E E T + GK+LH +
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 178 -TLALNGDNFINSSLVEMYCKCGRTDKASVILK---DVPLNLLRTGNSGGIVPWNSMVSG 233
+L+ ++F+ S+LV+MYC C + + D + L WN+M++G
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL-----------WNAMIAG 378
Query: 234 YVWNGKYEDCLKTFRSMVHELAIV-DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
Y N ++ L F M ++ + T+ V+ AC +G +H ++ K G
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 438
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGML 352
D +V ++L+ MYS+ G +D A IF ++ + ++ W +MI+G + A L M
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ 498
Query: 353 NQ-----------GIVPNEVTFLGVINACSHVGLLEEGS-TYFRMMKDVYCINPGVEHCT 400
N + PN +T + ++ +C+ + L +G + +K+ + V +
Sbjct: 499 NLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV--GS 556
Query: 401 SMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKN-IEMGKWVSEMLLQVAP 459
++VD+Y + GCL ++ +F+ W + + +H N E + M++Q
Sbjct: 557 ALVDMYAKCGCLQMSRK-VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Query: 460 SDPEAYILLSNMCTSNHRWDE 480
+ +I + C+ + DE
Sbjct: 616 PNEVTFISVFAACSHSGMVDE 636
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 178/379 (46%), Gaps = 54/379 (14%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLV-NSILDLYL 64
+ +M G P+ Y ++ K + ++++LGK +HA + + G D V V N++++LY
Sbjct: 85 YVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYR 144
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC GD +F + ++ VSWN++I
Sbjct: 145 KC-------------------------------GDFGAVYKVFDRISERNQVSWNSLISS 173
Query: 125 LIRCGYER--RALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVE---LGKQLHGRVITL 179
L C +E+ ALE CM++ E S T E +GKQ+H +
Sbjct: 174 L--CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK 231
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGG--IVPWNSMVSGYVWN 237
++FI ++LV MY K G+ + V+L G+ GG +V WN+++S N
Sbjct: 232 G-ELNSFIINTLVAMYGKLGKLASSKVLL----------GSFGGRDLVTWNTVLSSLCQN 280
Query: 238 GKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGH-RIDAYV 296
+ + L+ R MV E D T+++V+ AC++ +L G+++HAY K G +++V
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGM-LNQG 355
GS+L+ MY + +F + + + LW +MI+G + + K+A LF GM + G
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 356 IVPNEVTFLGVINACSHVG 374
++ N T GV+ AC G
Sbjct: 401 LLANSTTMAGVVPACVRSG 419
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 122/266 (45%), Gaps = 13/266 (4%)
Query: 118 WNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
W ++ +R R A+ M+ G + F +ELGKQ+H V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 178 TLALNGDNF-INSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
D+ + ++LV +Y KCG + + + V WNS++S
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI--------SERNQVSWNSLISSLCS 176
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLE---FGRQMHAYIQKIGHRID 293
K+E L+ FR M+ E T+ +V++AC+N + E G+Q+HAY + G ++
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE-LN 235
Query: 294 AYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLN 353
+++ ++L+ MY K G L + V+ ++ W +++S + + +A M+
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 354 QGIVPNEVTFLGVINACSHVGLLEEG 379
+G+ P+E T V+ ACSH+ +L G
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTG 321
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 127/257 (49%), Gaps = 14/257 (5%)
Query: 227 WNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ 286
W ++ V + + + T+ M+ D ++ A A+ +E G+Q+HA++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 287 KIGHRIDAY-VGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQAS 345
K G+ +D+ V ++L+++Y K G + +F +I+E N W S+IS K + A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 346 SLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDV--YCINPGVEHC---T 400
F ML++ + P+ T + V+ ACS++ + E M K V Y + G +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG----LMMGKQVHAYGLRKGELNSFIIN 240
Query: 401 SMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSS-CRLHKNIEMGKWVSEMLLQVAP 459
++V +YG+ G L +K + G L + W + LSS C+ + +E +++ EM+L+
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGGRDLVT-WNTVLSSLCQNEQLLEALEYLREMVLEGV- 298
Query: 460 SDPEAYILLSNMCTSNH 476
+P+ + + S + +H
Sbjct: 299 -EPDEFTISSVLPACSH 314
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 145/472 (30%), Positives = 227/472 (48%), Gaps = 37/472 (7%)
Query: 11 AKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFE 70
++ + P+Q T + CC +L VH +L NG D D L ++ +Y + +
Sbjct: 70 SQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVD 129
Query: 71 YAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGY 130
YA ++F+ T + + WN + RA AG E+ L ++ W + R G
Sbjct: 130 YARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY----------WK-----MNRIGV 174
Query: 131 ERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSS 190
E + + V SE T GK++H + + +I ++
Sbjct: 175 E--SDRFTYTYVLKACVASECTVNHLMK----------GKEIHAHLTRRGYSSHVYIMTT 222
Query: 191 LVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSM 250
LV+MY + G D AS + +P+ +V W++M++ Y NGK + L+TFR M
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVR--------NVVSWSAMIACYAKNGKAFEALRTFREM 274
Query: 251 VHELAIVDIRTVT--TVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSG 308
+ E +VT +V+ ACA+ LE G+ +H YI + G V S+L+ MY + G
Sbjct: 275 MRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCG 334
Query: 309 SLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
L+ +F ++++ +V W S+IS +HG GK+A +FE ML G P VTF+ V+
Sbjct: 335 KLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLG 394
Query: 369 ACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLT 428
ACSH GL+EEG F M + I P +EH MVDL GRA L E + +
Sbjct: 395 ACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGP 454
Query: 429 SVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
VW S L SCR+H N+E+ + S L + P + Y+LL+++ WDE
Sbjct: 455 KVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 506
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 156/348 (44%), Gaps = 51/348 (14%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEK----NLQLGKGVHAWMLRNGVDADVVLVN 57
V L+ +M G +++T + V K C A + +L GK +HA + R G + V ++
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMT 221
Query: 58 SILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL--PSKDV 115
+++D+Y + +YA +F +VV+W+ MI Y G ++L FR + +KD
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD- 280
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
+ + VT +E GK +HG
Sbjct: 281 ------------------------------SSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
++ L+ + S+LV MY +CG+ + + + + +V WNS++S Y
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM--------HDRDVVSWNSLISSYG 362
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRI 292
+G + ++ F M+ A T +V+ AC++ GL+E G+++ + + I +I
Sbjct: 363 VHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQI 422
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQI-NEPNVFLWTSMISGCALHG 339
+ Y + ++ + ++ LD+A + + + EP +W S++ C +HG
Sbjct: 423 EHY--ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 115/260 (44%), Gaps = 17/260 (6%)
Query: 218 TGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEF 277
+ +G + N ++ GK + ++ ++ + + +T +I C + L
Sbjct: 40 SSGAGAKISNNQLIQSLCKEGKLKQAIR----VLSQESSPSQQTYELLILCCGHRSSLSD 95
Query: 278 GRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCAL 337
++H +I G D ++ + LI MYS GS+D A +F + + +++W ++ L
Sbjct: 96 ALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL 155
Query: 338 HGKGKQASSLFEGMLNQGIVPNEVTFLGVINAC-------SHVGLLEEGSTYFRMMKDVY 390
G G++ L+ M G+ + T+ V+ AC +H L++ + + + Y
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNH--LMKGKEIHAHLTRRGY 213
Query: 391 CINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSS-CRLHKNIEMGKW 449
+ V T++VD+Y R GC ++ +++F W + ++ + K E +
Sbjct: 214 SSH--VYIMTTLVDMYARFGC-VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRT 270
Query: 450 VSEMLLQVAPSDPEAYILLS 469
EM+ + S P + ++S
Sbjct: 271 FREMMRETKDSSPNSVTMVS 290
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 230/479 (48%), Gaps = 48/479 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
L R M+ A P++YT V K CS +++G VH +LR G D DVV+ S +D Y
Sbjct: 97 LMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYG 156
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KCK A ++F E + V+W ++ AY+ +G++E++ MF +P +++ SWN ++DG
Sbjct: 157 KCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDG 216
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
L++ G A +L F E+ D
Sbjct: 217 LVKSGDLVNAKKL----------FDEMP-----------------------------KRD 237
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+S+++ Y K G A +L + W++++ GY NG+ +
Sbjct: 238 IISYTSMIDGYAKGGDMVSAR--------DLFEEARGVDVRAWSALILGYAQNGQPNEAF 289
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI-QKIGHRIDAYVGSSLIHM 303
K F M + D + ++SAC+ G E ++ +Y+ Q++ YV +LI M
Sbjct: 290 KVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDM 349
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
+K G +D A +F ++ + ++ + SM+ G A+HG G +A LFE M+++GIVP+EV F
Sbjct: 350 NAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAF 409
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
++ C L+EEG YF +M+ Y I +H + +V+L R G L E I
Sbjct: 410 TVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMP 469
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
S W S L C LH N E+ + V+ L ++ P +Y+LLSN+ + RW + A
Sbjct: 470 FEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVA 528
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 17/273 (6%)
Query: 106 MFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENG-TEFSEVTFXXXXXXXXXXX 164
+F +PS WN +I G + +L M+ G E TF
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 165 XVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGI 224
V +G +HG V+ + + D + +S V+ Y KC A + ++P
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMP--------ERNA 176
Query: 225 VPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY 284
V W ++V YV +G+ E+ +SM + ++ + ++ +G L +++
Sbjct: 177 VSWTALVVAYVKSGELEEA----KSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDE 232
Query: 285 IQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQA 344
+ K I +Y +S+I Y+K G + A +F + +V W+++I G A +G+ +A
Sbjct: 233 MPK--RDIISY--TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEA 288
Query: 345 SSLFEGMLNQGIVPNEVTFLGVINACSHVGLLE 377
+F M + + P+E +G+++ACS +G E
Sbjct: 289 FKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFE 321
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 129/316 (40%), Gaps = 39/316 (12%)
Query: 171 QLHGRVITLALNGD-NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
Q+H R+I L D N I+ + +S + + VP S G WN
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVP--------SPGTYLWNH 79
Query: 230 MVSGYVWNGKYEDCLKTF-RSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
++ GY + + + R M LA D T V+ C+N G + G +H + +I
Sbjct: 80 LIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRI 139
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
G D VG+S + Y K L A +F ++ E N WT+++ G+ ++A S+F
Sbjct: 140 GFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF 199
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGR 408
+ M + N ++ +++ G L F M I+ TSM+D Y +
Sbjct: 200 DLMPER----NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIIS-----YTSMIDGYAK 250
Query: 409 AGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDP-EAYIL 467
G ++ ++ +FE + +++ W + +L P EA+ +
Sbjct: 251 GGDMVSARD-LFEEA------------------RGVDVRAWSALILGYAQNGQPNEAFKV 291
Query: 468 LSNMCTSNHRWDEAAM 483
S MC N + DE M
Sbjct: 292 FSEMCAKNVKPDEFIM 307
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 236/480 (49%), Gaps = 41/480 (8%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF M+ K P+ +TLS+V CCS GK VHA + + + + + +++L LY
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYS 419
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC + D AYL +F+++ KD+V+W ++I G
Sbjct: 420 KCGC------------DPD---------AYL----------VFKSMEEKDMVAWGSLISG 448
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVT--FXXXXXXXXXXXXVELGKQLHGRVITLALN 182
L + G + AL++ M ++ + + G Q+HG +I L
Sbjct: 449 LCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLV 508
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ F+ SSL+++Y KCG L ++ L + + ++ +V WNSM+S Y N E
Sbjct: 509 LNVFVGSSLIDLYSKCG--------LPEMALKVFTSMSTENMVAWNSMISCYSRNNLPEL 560
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
+ F M+ + D ++T+V+ A ++ L G+ +H Y ++G D ++ ++LI
Sbjct: 561 SIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALID 620
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MY K G A IF+++ ++ W MI G HG A SLF+ M G P++VT
Sbjct: 621 MYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVT 680
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
FL +I+AC+H G +EEG F MK Y I P +EH +MVDL GRAG L E +FI
Sbjct: 681 FLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
I +S+W LS+ R H N+E+G +E LL++ P Y+ L N+ +EAA
Sbjct: 741 PIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAA 800
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 196/436 (44%), Gaps = 46/436 (10%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQL--GKGVHAWMLRNGVDADVVLVNSILDLY 63
FR M G P+ ++LS V E N + GK +H +MLRN +D D L +++D+Y
Sbjct: 156 FRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMY 215
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
K F L+ + W + + ++E +VV WN +I
Sbjct: 216 FK----------FGLS----IDAWRVFV-------EIEDK---------SNVVLWNVMIV 245
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
G G +L+L N + +F G+Q+H V+ + L+
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
D ++ +SL+ MY KCG +A + V L WN+MV+ Y N
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEI--------WNAMVAAYAENDYGYSA 357
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
L F M + + D T++ VIS C+ GL +G+ +HA + K + + + S+L+ +
Sbjct: 358 LDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTL 417
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGML--NQGIVPNEV 361
YSK G DA+++F+ + E ++ W S+ISG +GK K+A +F M + + P+
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477
Query: 362 TFLGVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
V NAC+ + L G + M+K +N V +S++DLY + G L E +F
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVG--SSLIDLYSKCG-LPEMALKVF 534
Query: 421 ENGISHLTSVWKSFLS 436
+ + W S +S
Sbjct: 535 TSMSTENMVAWNSMIS 550
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 209/470 (44%), Gaps = 58/470 (12%)
Query: 19 YTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFEL 78
+T S+ K CSA NL GK +H ++ G D + S++++Y+KC +YA ++F+
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 79 TGEG-------DVVTWNIMIRAYLGAGDVEKSLDMFRNL----PSKDVVSWNTIIDGLIR 127
+ DV WN MI Y ++ + FR + D S + ++ + +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 128 CGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFI 187
G RR E GKQ+HG ++ +L+ D+F+
Sbjct: 181 EGNFRR---------------------------------EEGKQIHGFMLRNSLDTDSFL 207
Query: 188 NSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTF 247
++L++MY K G + A + ++ + +V WN M+ G+ +G E L +
Sbjct: 208 KTALIDMYFKFGLSIDAWRVFVEIE-------DKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 248 RSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKS 307
+ + + T + AC+ + FGRQ+H + K+G D YV +SL+ MYSK
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKC 320
Query: 308 GSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVI 367
G + +A +F + + + +W +M++ A + G A LF M + ++P+ T VI
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI 380
Query: 368 NACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISH 426
+ CS +GL G S + + K +E ++++ LY + GC + +F++
Sbjct: 381 SCCSVLGLYNYGKSVHAELFKRPIQSTSTIE--SALLTLYSKCGCDPDAY-LVFKSMEEK 437
Query: 427 LTSVWKSFLSS-CRLHKNIEMGKWVSEMLLQVAPSDPEAYILLS--NMCT 473
W S +S C+ K E K +M P++ I+ S N C
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA 487
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 156/334 (46%), Gaps = 23/334 (6%)
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEF--SEVTFXXXXXXXXXXXXVELGKQLH 173
S N+ I LI+ G +AL L + + + F S TF + GK +H
Sbjct: 25 ASINSGIRALIQKGEYLQALHL-YSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIH 83
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSG-GIVPWNSMVS 232
G V+ L D FI +SLV MY KCG D A + + ++G S + WNSM+
Sbjct: 84 GSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS--QSGVSARDVTVWNSMID 141
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLL--EFGRQMHAYIQKIGH 290
GY ++++ + FR M+ D +++ V+S G E G+Q+H ++ +
Sbjct: 142 GYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSL 201
Query: 291 RIDAYVGSSLIHMYSKSGSLDDAWVIFRQI-NEPNVFLWTSMISGCALHGKGKQASSLFE 349
D+++ ++LI MY K G DAW +F +I ++ NV LW MI G G + + L+
Sbjct: 202 DTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM 261
Query: 350 GMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYC--INPGVEH----CTSMV 403
N + +F G + ACS E S + R ++C + G+ + CTS++
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQ----SENSGFGR---QIHCDVVKMGLHNDPYVCTSLL 314
Query: 404 DLYGRAGCLIETKNFIFENGISHLTSVWKSFLSS 437
+Y + G + E + +F + +W + +++
Sbjct: 315 SMYSKCGMVGEAET-VFSCVVDKRLEIWNAMVAA 347
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 157/503 (31%), Positives = 252/503 (50%), Gaps = 29/503 (5%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF+E+ + TL++V K C+ + L+ GK +HA +L GV+ D + +S++++Y
Sbjct: 177 LFKELNFSA---DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYA 233
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC A + E E D + + +I Y G V +S +F ++ V+ WN++I G
Sbjct: 234 KCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISG 293
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
I + AL +LF + N T T +E GKQ+H L D
Sbjct: 294 YIANNMKMEAL-VLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDD 352
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVP------LN-LLRTGNSGG-------------- 223
+ S+L++MY KCG +A + +V LN +++ S G
Sbjct: 353 IVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIEN 412
Query: 224 --IVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQ 280
++ WNSM +G+ NG + L+ F M H+L + D ++++VISACA+ LE G Q
Sbjct: 413 KSLISWNSMTNGFSQNGCTVETLEYFHQM-HKLDLPTDEVSLSSVISACASISSLELGEQ 471
Query: 281 MHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGK 340
+ A +G D V SSLI +Y K G ++ +F + + + W SMISG A +G+
Sbjct: 472 VFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQ 531
Query: 341 GKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCT 400
G +A LF+ M GI P ++TF+ V+ AC++ GL+EEG F MK + P EH +
Sbjct: 532 GFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFS 591
Query: 401 SMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPS 460
MVDL RAG + E N + E S+W S L C + MGK +E ++++ P
Sbjct: 592 CMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPE 651
Query: 461 DPEAYILLSNMCTSNHRWDEAAM 483
+ AY+ LS + ++ W+ +A+
Sbjct: 652 NSVAYVQLSAIFATSGDWESSAL 674
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 207/496 (41%), Gaps = 86/496 (17%)
Query: 24 VFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLV-NSILDLYLKCKAFEYAERLFELTGEG 82
+ + CS+ L + + +L+ G + +V+V N +L +Y + A LF+ +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 83 DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMV 142
+ +WN MI Y+ +G+ SL F +P +D SWN ++ G + G A L M
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 143 E---------------NGTE------FSEVTFXXXXXXXXXX-------XXVELGKQLHG 174
E NG F E+ F ++ GKQ+H
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHA 211
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVP--------------LNLLRTGN 220
+++ + D+ +NSSLV +Y KCG AS +L+ + N R
Sbjct: 212 QILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNE 271
Query: 221 SGG---------IVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACAN 271
S G ++ WNSM+SGY+ N + L F M +E D RT+ VI+AC
Sbjct: 272 SRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETR-EDSRTLAAVINACIG 330
Query: 272 AGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGS---------------------- 309
G LE G+QMH + K G D V S+L+ MYSK GS
Sbjct: 331 LGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSM 390
Query: 310 ---------LDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+DDA +F +I ++ W SM +G + +G + F M + +E
Sbjct: 391 IKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDE 450
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
V+ VI+AC+ + LE G F + ++ +S++DLY + G +E +F
Sbjct: 451 VSLSSVISACASISSLELGEQVF-ARATIVGLDSDQVVSSSLIDLYCKCG-FVEHGRRVF 508
Query: 421 ENGISHLTSVWKSFLS 436
+ + W S +S
Sbjct: 509 DTMVKSDEVPWNSMIS 524
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 143/505 (28%), Positives = 239/505 (47%), Gaps = 57/505 (11%)
Query: 3 FSLFREMQAKGAC---PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSI 59
F L+++M G C P+ +T +FK C+ + LG +++ +
Sbjct: 138 FLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH---------------MILGHV 182
Query: 60 LDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN 119
L L L+ + + N I + GD+E + +F P +D+VSWN
Sbjct: 183 LKLRLELVSHVH----------------NASIHMFASCGDMENARKVFDESPVRDLVSWN 226
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
+I+G + G +A+ + M G + +VT + GK+ + V
Sbjct: 227 CLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN 286
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVI-----------------------LKDVPLNLL 216
L + ++L++M+ KCG +A I L DV L
Sbjct: 287 GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLF 346
Query: 217 RTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLE 276
+V WN+M+ G V + +D L F+ M D T+ +SAC+ G L+
Sbjct: 347 DDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALD 406
Query: 277 FGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCA 336
G +H YI+K ++ +G+SL+ MY+K G++ +A +F I N +T++I G A
Sbjct: 407 VGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLA 466
Query: 337 LHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGV 396
LHG A S F M++ GI P+E+TF+G+++AC H G+++ G YF MK + +NP +
Sbjct: 467 LHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQL 526
Query: 397 EHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQ 456
+H + MVDL GRAG L E + + +VW + L CR+H N+E+G+ ++ LL+
Sbjct: 527 KHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLE 586
Query: 457 VAPSDPEAYILLSNMCTSNHRWDEA 481
+ PSD Y+LL M + W++A
Sbjct: 587 LDPSDSGIYVLLDGMYGEANMWEDA 611
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 154/331 (46%), Gaps = 25/331 (7%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
KQ+ ++I L D F +S L+ C ++ + D + +L+ + I WN
Sbjct: 70 KQIQAQMIINGLILDPFASSRLIAF---CALSESRYL---DYSVKILKGIENPNIFSWNV 123
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHE---LAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ 286
+ G+ + ++ ++ M+ + D T + CA+ L G + ++
Sbjct: 124 TIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVL 183
Query: 287 KIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
K+ + ++V ++ IHM++ G +++A +F + ++ W +I+G G+ ++A
Sbjct: 184 KLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIY 243
Query: 347 LFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLY 406
+++ M ++G+ P++VT +G++++CS +G L G ++ +K+ + + +++D++
Sbjct: 244 VYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE-NGLRMTIPLVNALMDMF 302
Query: 407 GRAGCLIETKNFIFENGISHLTSVWKSFLS----------SCRLHKNIEMGK---WVSEM 453
+ G + E + IF+N W + +S S +L ++E W + +
Sbjct: 303 SKCGDIHEARR-IFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMI 361
Query: 454 LLQV-APSDPEAYILLSNMCTSNHRWDEAAM 483
V A +A L M TSN + DE M
Sbjct: 362 GGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 225/479 (46%), Gaps = 38/479 (7%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
FSLFREM+ P+ T+ ++ + S EK+L+L + +HA +R GVD V + N+ +
Sbjct: 137 AFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIS 196
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
Y KC + A+ +FE GD + VVSWN++
Sbjct: 197 TYGKCGDLDSAKLVFEAIDRGD-----------------------------RTVVSWNSM 227
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
G A L M+ + TF + G+ +H I L
Sbjct: 228 FKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGT 287
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ D ++ + MY K T A + L S V W M+SGY G +
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARL--------LFDIMTSRTCVSWTVMISGYAEKGDMD 339
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG-HRIDAYVGSSL 300
+ L F +M+ D+ T+ ++IS C G LE G+ + A G R + + ++L
Sbjct: 340 EALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNAL 399
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
I MYSK GS+ +A IF E V WT+MI+G AL+G +A LF M++ PN
Sbjct: 400 IDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNH 459
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
+TFL V+ AC+H G LE+G YF +MK VY I+PG++H + MVDL GR G L E I
Sbjct: 460 ITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIR 519
Query: 421 ENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
+W + L++C++H+N+++ + +E L + P Y+ ++N+ + WD
Sbjct: 520 NMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWD 578
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 199/438 (45%), Gaps = 40/438 (9%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LFREM+ G PN +T V K C+ ++ + VHA ++++ +DV + + +D+++
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC + +YA ++FE E D TWN M+ + +G +K+ +FR + ++ + +
Sbjct: 99 KCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMT 158
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
LI+ ++L+LL + +H I L ++
Sbjct: 159 LIQSASFEKSLKLL-------------------------------EAMHAVGIRLGVDVQ 187
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ ++ + Y KCG D A ++ + + +V WNSM Y G+ D
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAI------DRGDRTVVSWNSMFKAYSVFGEAFDAF 241
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMY 304
+ M+ E D+ T + ++C N L GR +H++ +G D ++ I MY
Sbjct: 242 GLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMY 301
Query: 305 SKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFL 364
SKS A ++F + WT MISG A G +A +LF M+ G P+ VT L
Sbjct: 302 SKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLL 361
Query: 365 GVINACSHVGLLEEGSTYFRMMKDVY-CINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
+I+ C G LE G + D+Y C V C +++D+Y + G + E ++ IF+N
Sbjct: 362 SLISGCGKFGSLETGK-WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARD-IFDNT 419
Query: 424 ISHLTSVWKSFLSSCRLH 441
W + ++ L+
Sbjct: 420 PEKTVVTWTTMIAGYALN 437
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 124/308 (40%), Gaps = 41/308 (13%)
Query: 74 RLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERR 133
RL+ ++G V WN+ IR + D +SL +FR
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFRE------------------------ 42
Query: 134 ALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVE 193
M G E + TF V + +H +I D F+ ++ V+
Sbjct: 43 -------MKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVD 95
Query: 194 MYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHE 253
M+ KC D A+ + + +P T WN+M+SG+ +G + FR M
Sbjct: 96 MFVKCNSVDYAAKVFERMPERDATT--------WNAMLSGFCQSGHTDKAFSLFREMRLN 147
Query: 254 LAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDA 313
D TV T+I + + L+ MHA ++G + V ++ I Y K G LD A
Sbjct: 148 EITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSA 207
Query: 314 WVIFRQIN--EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACS 371
++F I+ + V W SM ++ G+ A L+ ML + P+ TF+ + +C
Sbjct: 208 KLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQ 267
Query: 372 HVGLLEEG 379
+ L +G
Sbjct: 268 NPETLTQG 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 8/210 (3%)
Query: 215 LLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGL 274
L R + WN + V + L FR M + T V ACA
Sbjct: 8 LYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAD 67
Query: 275 LEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISG 334
+ +HA++ K D +VG++ + M+ K S+D A +F ++ E + W +M+SG
Sbjct: 68 VGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSG 127
Query: 335 CALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDV---YC 391
G +A SLF M I P+ VT + +I + S E+ M V
Sbjct: 128 FCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLG 183
Query: 392 INPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
++ V + + YG+ G L ++ +FE
Sbjct: 184 VDVQVTVANTWISTYGKCGDL-DSAKLVFE 212
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 232/482 (48%), Gaps = 43/482 (8%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
SL+R M+ G P+++T + VF C+ + + +G+ VH+ + + G++ DV + +S++
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y KC YA +LF+ + +D VSWN++
Sbjct: 176 MYAKCGQVGYARKLFD-------------------------------EITERDTVSWNSM 204
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
I G GY + A++L M E G E E T + G+ L IT +
Sbjct: 205 ISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKI 264
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
F+ S L+ MY KCG D A + +++ V W +M++ Y NGK
Sbjct: 265 GLSTFLGSKLISMYGKCGDLDSARRVFN----QMIKKDR----VAWTAMITVYSQNGKSS 316
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
+ K F M D T++TV+SAC + G LE G+Q+ + ++ + + YV + L+
Sbjct: 317 EAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLV 376
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
MY K G +++A +F + N W +MI+ A G K+A LF+ M + P+++
Sbjct: 377 DMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDI 433
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
TF+GV++AC H GL+ +G YF M ++ + P +EH T+++DL RAG L E F+
Sbjct: 434 TFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMER 493
Query: 422 NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEA-YILLSNMCTSNHRWDE 480
+ + L +C K++ + + ML+++ + Y++ SN+ WDE
Sbjct: 494 FPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDE 553
Query: 481 AA 482
+A
Sbjct: 554 SA 555
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 184/419 (43%), Gaps = 62/419 (14%)
Query: 26 KCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVV 85
KC S + Q + A ML + V+ L+ ++L F Y+ LF +T E +
Sbjct: 46 KCISVNQLRQ----IQAQMLLHSVEKPNFLIPKAVEL----GDFNYSSFLFSVTEEPNHY 97
Query: 86 TWNIMIRAYLGA-GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVEN 144
++N MIR D E +L ++R M +
Sbjct: 98 SFNYMIRGLTNTWNDHEAALSLYRR-------------------------------MKFS 126
Query: 145 GTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKA 204
G + + T+ + +G+ +H + + L D IN SL+ MY KCG+ A
Sbjct: 127 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYA 186
Query: 205 SVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTT 264
+ ++ V WNSM+SGY G +D + FR M E D RT+ +
Sbjct: 187 RKLFDEI--------TERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVS 238
Query: 265 VISACANAGLLEFGRQMH--AYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE 322
++ AC++ G L GR + A +KIG + ++GS LI MY K G LD A +F Q+ +
Sbjct: 239 MLGACSHLGDLRTGRLLEEMAITKKIG--LSTFLGSKLISMYGKCGDLDSARRVFNQMIK 296
Query: 323 PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTY 382
+ WT+MI+ + +GK +A LF M G+ P+ T V++AC VG LE G
Sbjct: 297 KDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQI 356
Query: 383 FRMMKDVYCINPGVEH----CTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSS 437
+ + ++H T +VD+YG+ G +E +FE + W + +++
Sbjct: 357 -----ETHASELSLQHNIYVATGLVDMYGKCG-RVEEALRVFEAMPVKNEATWNAMITA 409
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 218/446 (48%), Gaps = 16/446 (3%)
Query: 43 WMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGE---GDVV-TWNIMIRAYLGAG 98
WM+ VD D + S+L + K E + +L E GD + N ++ YL G
Sbjct: 208 WMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCG 267
Query: 99 DVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXX 158
++++ +F + +DV++W +I+G G ALEL M G + VT
Sbjct: 268 RMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVS 327
Query: 159 XXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRT 218
V GK LHG + + D I +SL+ MY KC R D + + T
Sbjct: 328 VCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGA--SKYHT 385
Query: 219 GNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFG 278
G PW+++++G V N D L F+ M E +I T+ +++ A A L
Sbjct: 386 G------PWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQA 439
Query: 279 RQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEP----NVFLWTSMISG 334
+H Y+ K G + L+H+YSK G+L+ A IF I E +V LW ++ISG
Sbjct: 440 MNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISG 499
Query: 335 CALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINP 394
+HG G A +F M+ G+ PNE+TF +NACSH GL+EEG T FR M + Y
Sbjct: 500 YGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLA 559
Query: 395 GVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEML 454
H T +VDL GRAG L E N I ++VW + L++C H+N+++G+ + L
Sbjct: 560 RSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKL 619
Query: 455 LQVAPSDPEAYILLSNMCTSNHRWDE 480
++ P + Y+LL+N+ + RW +
Sbjct: 620 FELEPENTGNYVLLANIYAALGRWKD 645
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 196/450 (43%), Gaps = 57/450 (12%)
Query: 3 FSLFREMQAKGA--CPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
S+F M ++G P+ YT V K K+++LG VH +LR+ D + N++L
Sbjct: 100 ISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALL 159
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
+Y+ G VE + D+F + ++DV+SWNT
Sbjct: 160 AMYMNF-------------------------------GKVEMARDVFDVMKNRDVISWNT 188
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+I G R GY AL + MV + T +E+G+ +H V
Sbjct: 189 MISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKR 248
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
L + ++LV MY KCGR D+A + + ++ W M++GY +G
Sbjct: 249 LGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR--------DVITWTCMINGYTEDGDV 300
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
E+ L+ R M E + T+ +++S C +A + G+ +H + + D + +SL
Sbjct: 301 ENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSL 360
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
I MY+K +D + +F ++ + W+++I+GC + A LF+ M + + PN
Sbjct: 361 ISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNI 420
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPG----VEHCTSMVDLYGRAGCLIETK 416
T ++ A + + L + M Y G ++ T +V +Y + G L E+
Sbjct: 421 ATLNSLLPAYAALADLRQA-----MNIHCYLTKTGFMSSLDAATGLVHVYSKCGTL-ESA 474
Query: 417 NFIFENGI-----SHLTSVWKSFLSSCRLH 441
+ IF NGI S +W + +S +H
Sbjct: 475 HKIF-NGIQEKHKSKDVVLWGALISGYGMH 503
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 171/351 (48%), Gaps = 20/351 (5%)
Query: 94 YLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSE--V 151
Y G + + +F +P ++S+N +I +R G A+ + MV G +
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 152 TFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDV 211
T+ ++LG +HGR++ D ++ ++L+ MY G+ + A +DV
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMA----RDV 174
Query: 212 PLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACAN 271
++++ + ++ WN+M+SGY NG D L F MV+E +D T+ +++ C +
Sbjct: 175 -FDVMKNRD---VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGH 230
Query: 272 AGLLEFGRQMHAYIQ--KIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWT 329
LE GR +H ++ ++G +I+ V ++L++MY K G +D+A +F ++ +V WT
Sbjct: 231 LKDLEMGRNVHKLVEEKRLGDKIE--VKNALVNMYLKCGRMDEARFVFDRMERRDVITWT 288
Query: 330 SMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTY--FRMMK 387
MI+G G + A L M +G+ PN VT +++ C + +G + + +
Sbjct: 289 CMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQ 348
Query: 388 DVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSC 438
VY + +E TS++ +Y + ++ +F + T W + ++ C
Sbjct: 349 QVYS-DIIIE--TSLISMYAKCK-RVDLCFRVFSGASKYHTGPWSAIIAGC 395
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 155/359 (43%), Gaps = 53/359 (14%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
L R MQ +G PN T++S+ C + GK +H W +R V +D+++ S++ +
Sbjct: 304 LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISM 363
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV----VSW 118
Y KCK + R+F + W+ +I + V +L +F+ + +DV +
Sbjct: 364 YAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATL 423
Query: 119 NTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVIT 178
N+++ R+A+ + + + G
Sbjct: 424 NSLLPAYAALADLRQAMNIHCYLTKTG-------------------------------FM 452
Query: 179 LALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG 238
+L+ + LV +Y KCG + A I + S +V W +++SGY +G
Sbjct: 453 SSLDA----ATGLVHVYSKCGTLESAHKIFNGIQ----EKHKSKDVVLWGALISGYGMHG 504
Query: 239 KYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI---QKIGHRIDAY 295
+ L+ F MV + T T+ ++AC+++GL+E G + ++ K R + Y
Sbjct: 505 DGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHY 564
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGK----QASSLFE 349
+ ++ + ++G LD+A+ + I EP +W ++++ C H + A+ LFE
Sbjct: 565 --TCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFE 621
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 13/254 (5%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
K LH VIT + + S+L Y CG A + +++P ++ +N
Sbjct: 35 KALHCHVITGGRVSGHIL-STLSVTYALCGHITYARKLFEEMP--------QSSLLSYNI 85
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHE--LAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK 287
++ YV G Y D + F MV E + D T V A ++ G +H I +
Sbjct: 86 VIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILR 145
Query: 288 IGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSL 347
D YV ++L+ MY G ++ A +F + +V W +MISG +G A +
Sbjct: 146 SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMM 205
Query: 348 FEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYG 407
F+ M+N+ + + T + ++ C H+ LE G +++++ + +E ++V++Y
Sbjct: 206 FDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKR-LGDKIEVKNALVNMYL 264
Query: 408 RAGCLIETKNFIFE 421
+ G + E + F+F+
Sbjct: 265 KCGRMDEAR-FVFD 277
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 247/502 (49%), Gaps = 55/502 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
FR ++ + PN T+ V C+ ++L+ G+ V+A++ +G++ + ++V++++D+Y+
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 282
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC A + A+RLF+ G ++ N M Y
Sbjct: 283 KCNAIDVAKRLFDEYGASNLDLCNAMASNY------------------------------ 312
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+R G R AL + M+++G ++ + GK HG V+
Sbjct: 313 -VRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNS----------------------- 221
+ I ++L++MY KC R D A I + + T NS
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 222 GGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQ 280
IV WN+++SG V +E+ ++ F SM + + D T+ ++ SAC + G L+ +
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 281 MHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGK 340
++ YI+K G ++D +G++L+ M+S+ G + A IF + +V WT+ I A+ G
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 341 GKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCT 400
++A LF+ M+ QG+ P+ V F+G + ACSH GL+++G F M ++ ++P H
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 401 SMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPS 460
MVDL GRAG L E I + + +W S L++CR+ N+EM + +E + +AP
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 461 DPEAYILLSNMCTSNHRWDEAA 482
+Y+LLSN+ S RW++ A
Sbjct: 672 RTGSYVLLSNVYASAGRWNDMA 693
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/504 (21%), Positives = 209/504 (41%), Gaps = 77/504 (15%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF M G P++YT C+ + G +H +++ G D+ + NS++ Y
Sbjct: 121 LFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYA 180
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
+C G+++ + +F + ++VVSW ++I G
Sbjct: 181 EC-------------------------------GELDSARKVFDEMSERNVVSWTSMICG 209
Query: 125 LIRCGYERRALELLFCMVEN-GTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
R + + A++L F MV + + VT +E G++++ + +
Sbjct: 210 YARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV 269
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
++ + S+LV+MY KC D A + + + + N+M S YV G +
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEY--------GASNLDLCNAMASNYVRQGLTREA 321
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR---------IDA 294
L F M+ D ++ + IS+C+ + +G+ H Y+ + G ID
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDM 381
Query: 295 YVG----------------------SSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMI 332
Y+ +S++ Y ++G +D AW F + E N+ W ++I
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTII 441
Query: 333 SGCALHGKGKQASSLFEGMLNQ-GIVPNEVTFLGVINACSHVGLLEEGS-TYFRMMKDVY 390
SG ++A +F M +Q G+ + VT + + +AC H+G L+ Y+ + K+
Sbjct: 442 SGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-- 499
Query: 391 CINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMG-KW 449
I V T++VD++ R G E+ IF + + S W + + + + N E +
Sbjct: 500 GIQLDVRLGTTLVDMFSRCG-DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558
Query: 450 VSEMLLQVAPSDPEAYILLSNMCT 473
+M+ Q D A++ C+
Sbjct: 559 FDDMIEQGLKPDGVAFVGALTACS 582
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 149/325 (45%), Gaps = 21/325 (6%)
Query: 118 WNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
+N++I G G A+ L M+ +G + TF G Q+HG ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
+ D F+ +SLV Y +CG D A + ++ + +V W SM+ GY
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEM--------SERNVVSWTSMICGYARR 213
Query: 238 GKYEDCLKTFRSMVHELAIV-DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
+D + F MV + + + T+ VISACA LE G +++A+I+ G ++ +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
S+L+ MY K ++D A +F + N+ L +M S G ++A +F M++ G+
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH----CTSMVDLYGRAGCL 412
P+ ++ L I++CS + + G + Y + G E C +++D+Y + C
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHG-----YVLRNGFESWDNICNALIDMYMK--CH 386
Query: 413 IETKNF-IFENGISHLTSVWKSFLS 436
+ F IF+ + W S ++
Sbjct: 387 RQDTAFRIFDRMSNKTVVTWNSIVA 411
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 14/263 (5%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
K H + L+ D + LV C+ G + S K+V N + + G +NS
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLS-FAKEVFEN---SESYGTCFMYNS 104
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG 289
++ GY +G + + F M++ D T +SACA + G Q+H I K+G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 290 HRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFE 349
+ D +V +SL+H Y++ G LD A +F +++E NV WTSMI G A K A LF
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 350 GML-NQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVE----HCTSMVD 404
M+ ++ + PN VT + VI+AC+ + LE G + ++ N G+E +++VD
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR-----NSGIEVNDLMVSALVD 279
Query: 405 LYGRAGCLIETKNFIFENGISHL 427
+Y + + K E G S+L
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNL 302
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 247/502 (49%), Gaps = 55/502 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
FR ++ + PN T+ V C+ ++L+ G+ V+A++ +G++ + ++V++++D+Y+
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 282
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC A + A+RLF+ G ++ N M Y
Sbjct: 283 KCNAIDVAKRLFDEYGASNLDLCNAMASNY------------------------------ 312
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+R G R AL + M+++G ++ + GK HG V+
Sbjct: 313 -VRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNS----------------------- 221
+ I ++L++MY KC R D A I + + T NS
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 222 GGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQ 280
IV WN+++SG V +E+ ++ F SM + + D T+ ++ SAC + G L+ +
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 281 MHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGK 340
++ YI+K G ++D +G++L+ M+S+ G + A IF + +V WT+ I A+ G
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 341 GKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCT 400
++A LF+ M+ QG+ P+ V F+G + ACSH GL+++G F M ++ ++P H
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 401 SMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPS 460
MVDL GRAG L E I + + +W S L++CR+ N+EM + +E + +AP
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 461 DPEAYILLSNMCTSNHRWDEAA 482
+Y+LLSN+ S RW++ A
Sbjct: 672 RTGSYVLLSNVYASAGRWNDMA 693
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/504 (21%), Positives = 209/504 (41%), Gaps = 77/504 (15%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF M G P++YT C+ + G +H +++ G D+ + NS++ Y
Sbjct: 121 LFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYA 180
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
+C G+++ + +F + ++VVSW ++I G
Sbjct: 181 EC-------------------------------GELDSARKVFDEMSERNVVSWTSMICG 209
Query: 125 LIRCGYERRALELLFCMVEN-GTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
R + + A++L F MV + + VT +E G++++ + +
Sbjct: 210 YARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV 269
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
++ + S+LV+MY KC D A + + + + N+M S YV G +
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEY--------GASNLDLCNAMASNYVRQGLTREA 321
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR---------IDA 294
L F M+ D ++ + IS+C+ + +G+ H Y+ + G ID
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDM 381
Query: 295 YVG----------------------SSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMI 332
Y+ +S++ Y ++G +D AW F + E N+ W ++I
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTII 441
Query: 333 SGCALHGKGKQASSLFEGMLNQ-GIVPNEVTFLGVINACSHVGLLEEGS-TYFRMMKDVY 390
SG ++A +F M +Q G+ + VT + + +AC H+G L+ Y+ + K+
Sbjct: 442 SGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-- 499
Query: 391 CINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMG-KW 449
I V T++VD++ R G E+ IF + + S W + + + + N E +
Sbjct: 500 GIQLDVRLGTTLVDMFSRCG-DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558
Query: 450 VSEMLLQVAPSDPEAYILLSNMCT 473
+M+ Q D A++ C+
Sbjct: 559 FDDMIEQGLKPDGVAFVGALTACS 582
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 149/325 (45%), Gaps = 21/325 (6%)
Query: 118 WNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
+N++I G G A+ L M+ +G + TF G Q+HG ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
+ D F+ +SLV Y +CG D A + ++ + +V W SM+ GY
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEM--------SERNVVSWTSMICGYARR 213
Query: 238 GKYEDCLKTFRSMVHELAIV-DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
+D + F MV + + + T+ VISACA LE G +++A+I+ G ++ +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
S+L+ MY K ++D A +F + N+ L +M S G ++A +F M++ G+
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH----CTSMVDLYGRAGCL 412
P+ ++ L I++CS + + G + Y + G E C +++D+Y + C
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHG-----YVLRNGFESWDNICNALIDMYMK--CH 386
Query: 413 IETKNF-IFENGISHLTSVWKSFLS 436
+ F IF+ + W S ++
Sbjct: 387 RQDTAFRIFDRMSNKTVVTWNSIVA 411
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 14/263 (5%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
K H + L+ D + LV C+ G + S K+V N + + G +NS
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLS-FAKEVFEN---SESYGTCFMYNS 104
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG 289
++ GY +G + + F M++ D T +SACA + G Q+H I K+G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 290 HRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFE 349
+ D +V +SL+H Y++ G LD A +F +++E NV WTSMI G A K A LF
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 350 GML-NQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVE----HCTSMVD 404
M+ ++ + PN VT + VI+AC+ + LE G + ++ N G+E +++VD
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR-----NSGIEVNDLMVSALVD 279
Query: 405 LYGRAGCLIETKNFIFENGISHL 427
+Y + + K E G S+L
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNL 302
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 199/378 (52%), Gaps = 9/378 (2%)
Query: 106 MFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXX 165
+FR + +NT+I G + AL M++ G E T+
Sbjct: 88 IFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKS 147
Query: 166 VELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIV 225
+ GKQ+HG+V L L D F+ +SL+ MY +CG + +S + + + S
Sbjct: 148 IREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKL--------ESKTAA 199
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAY 284
W+SMVS G + +CL FR M E + + + + + ACAN G L G +H +
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF 259
Query: 285 IQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQA 344
+ + ++ V +SL+ MY K G LD A IF+++ + N +++MISG ALHG+G+ A
Sbjct: 260 LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESA 319
Query: 345 SSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVD 404
+F M+ +G+ P+ V ++ V+NACSH GL++EG F M + P EH +VD
Sbjct: 320 LRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVD 379
Query: 405 LYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEA 464
L GRAG L E I I +W++FLS CR+ +NIE+G+ ++ LL+++ +P
Sbjct: 380 LLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGD 439
Query: 465 YILLSNMCTSNHRWDEAA 482
Y+L+SN+ + WD+ A
Sbjct: 440 YLLISNLYSQGQMWDDVA 457
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 144/334 (43%), Gaps = 42/334 (12%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+ EM +G P+ +T + K C+ K+++ GK +H
Sbjct: 119 FYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHG---------------------- 156
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
++F+L E DV N +I Y G++E S +F L SK SW++++
Sbjct: 157 ---------QVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA 207
Query: 125 LIRCGYERRALELLFCMV-ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
G L L M E + E + LG +HG ++
Sbjct: 208 RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL 267
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ + +SLV+MY KCG DKA L++ + + +++M+SG +G+ E
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKA--------LHIFQKMEKRNNLTYSAMISGLALHGEGESA 319
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGH-RIDAYVGSSLIH 302
L+ F M+ E D +V++AC+++GL++ GR++ A + K G A L+
Sbjct: 320 LRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVD 379
Query: 303 MYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGC 335
+ ++G L++A + I E N +W + +S C
Sbjct: 380 LLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC 413
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 32/182 (17%)
Query: 309 SLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
S++ A IFR I++P F + +MI G ++A + M+ +G P+ T+ ++
Sbjct: 81 SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 369 ACSHVGLLEEGS----TYFR--MMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
AC+ + + EG F+ + DV+ N S++++YGR G +E + +FE
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQN-------SLINMYGRCG-EMELSSAVFEK 192
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCT-SNHRWDEA 481
S + W S +S+ MG W E +L MC+ +N + +E+
Sbjct: 193 LESKTAASWSSMVSA-----RAGMGMW------------SECLLLFRGMCSETNLKAEES 235
Query: 482 AM 483
M
Sbjct: 236 GM 237
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 219/423 (51%), Gaps = 34/423 (8%)
Query: 87 WNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGT 146
WN +++ Y+ G+ + +F +P DV S+N +I G + G+ AL+L F MV +G
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 147 EFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA--LNGDNFINSSLVEMYCKCGRTDKA 204
E E T + LGK +HG + + + ++++L++MY KC + A
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 205 SVILKDVPLNLLRTGNS-----------------------GGIVPWNSMVSGYVWNGKYE 241
+ +R+ N+ +V WNS++ GY G +
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 242 DCLKTFRSMVHELAIV-----DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
+T R + +E+ IV D T+ ++IS AN G L GR +H + ++ + DA++
Sbjct: 349 ---RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFL 405
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
S+LI MY K G ++ A+++F+ E +V LWTSMI+G A HG G+QA LF M +G+
Sbjct: 406 SSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGV 465
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
PN VT L V+ ACSH GL+EEG F MKD + +P EH S+VDL RAG + E K
Sbjct: 466 TPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAK 525
Query: 417 NFIFEN-GISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSN 475
+ + + + S+W S LS+CR ++IE + LL++ P Y+LLSN+ +
Sbjct: 526 DIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATV 585
Query: 476 HRW 478
RW
Sbjct: 586 GRW 588
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 188/341 (55%), Gaps = 17/341 (4%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNG--VDADVVLVNSIL 60
L+ +M + G P++YT+ S+ CC +++LGKGVH W+ R G ++++L N++L
Sbjct: 217 LKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALL 276
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
D+Y KCK A+R F+ + D+ +WN M+ ++ GD+E + +F +P +D+VSWN+
Sbjct: 277 DMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNS 336
Query: 121 IIDGLIRCGYERRALELLF---CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
++ G + G ++R + LF +VE + VT + G+ +HG VI
Sbjct: 337 LLFGYSKKGCDQRTVRELFYEMTIVEK-VKPDRVTMVSLISGAANNGELSHGRWVHGLVI 395
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
L L GD F++S+L++MYCKCG ++A ++ K T + W SM++G ++
Sbjct: 396 RLQLKGDAFLSSALIDMYCKCGIIERAFMVFK--------TATEKDVALWTSMITGLAFH 447
Query: 238 GKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ-KIGHRIDAYV 296
G + L+ F M E + T+ V++AC+++GL+E G + +++ K G +
Sbjct: 448 GNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEH 507
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQ--INEPNVFLWTSMISGC 335
SL+ + ++G +++A I ++ P+ +W S++S C
Sbjct: 508 YGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSAC 548
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 235/477 (49%), Gaps = 43/477 (9%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDA-DVVLVNSILDLY 63
LF+EM G P++++ S CS + ++GK +H +R+ ++ DV+++ SILD+Y
Sbjct: 218 LFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMY 277
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
K YAER+F + ++V WN+MI Y G V + F+ + ++ + + I
Sbjct: 278 SKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVIT- 336
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
++ LL + G+ +HG +
Sbjct: 337 ----------SINLL-----------------------PASAILEGRTIHGYAMRRGFLP 363
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ ++L++MY +CG+ A VI + ++ WNS+++ YV NGK
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMA--------EKNVISWNSIIAAYVQNGKNYSA 415
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
L+ F+ + + D T+ +++ A A + L GR++HAYI K + + + +SL+HM
Sbjct: 416 LELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHM 475
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
Y+ G L+DA F I +V W S+I A+HG G+ + LF M+ + PN+ TF
Sbjct: 476 YAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTF 535
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
++ ACS G+++EG YF MK Y I+PG+EH M+DL GR G K F+ E
Sbjct: 536 ASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
+W S L++ R HK+I + ++ +E + ++ + Y+LL NM RW++
Sbjct: 596 FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWED 652
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 203/479 (42%), Gaps = 48/479 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+ M G + +T V K + +L+ GK +HA +++ G +DV + NS++ LY+
Sbjct: 117 FYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYM 176
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
K AE++FE +P +D+VSWN++I G
Sbjct: 177 KLGCAWDAEKVFE-------------------------------EMPERDIVSWNSMISG 205
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL-NG 183
+ G +L L M++ G + + ++GK++H + + G
Sbjct: 206 YLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
D + +S+++MY K G A I + IV WN M+ Y NG+ D
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMI--------QRNIVAWNVMIGCYARNGRVTDA 317
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
F+ M + + V T I+ + +LE GR +H Y + G + ++LI M
Sbjct: 318 FLCFQKMSEQNGLQP--DVITSINLLPASAILE-GRTIHGYAMRRGFLPHMVLETALIDM 374
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
Y + G L A VIF ++ E NV W S+I+ +GK A LF+ + + +VP+ T
Sbjct: 375 YGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTI 434
Query: 364 LGVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
++ A + L EG + ++K Y N + S+V +Y G L + + F +
Sbjct: 435 ASILPAYAESLSLSEGREIHAYIVKSRYWSNTII--LNSLVHMYAMCGDLEDARK-CFNH 491
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWV-SEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
+ W S + + +H + W+ SEM+ + + L C+ + DE
Sbjct: 492 ILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDE 550
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 164/355 (46%), Gaps = 23/355 (6%)
Query: 90 MIRAYLGAGD---VEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGT 146
+ RA G D +E +L +F + D WN +I G CG A++ MV G
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126
Query: 147 EFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASV 206
+ T+ +E GK++H VI L D ++ +SL+ +Y K G A
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 207 ILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVI 266
+ +++P IV WNSM+SGY+ G L F+ M+ D + + +
Sbjct: 187 VFEEMP--------ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSAL 238
Query: 267 SACANAGLLEFGRQMHAYIQKIGHRI---DAYVGSSLIHMYSKSGSLDDAWVIFRQINEP 323
AC++ + G+++H + + RI D V +S++ MYSK G + A IF + +
Sbjct: 239 GACSHVYSPKMGKEIHCH--AVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR 296
Query: 324 NVFLWTSMISGCALHGKGKQASSLFEGMLNQ-GIVPNEVTFLGVINACSHVGLLEEGSTY 382
N+ W MI A +G+ A F+ M Q G+ P+ +T + ++ A + +LE + +
Sbjct: 297 NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA---ILEGRTIH 353
Query: 383 FRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSS 437
M+ + + +E T+++D+YG G L ++ IF+ W S +++
Sbjct: 354 GYAMRRGFLPHMVLE--TALIDMYGECGQL-KSAEVIFDRMAEKNVISWNSIIAA 405
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 33/251 (13%)
Query: 167 ELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP 226
++ KQ++ +T AL G F +S L+E L L N
Sbjct: 57 KVTKQVNDPALTRALRG--FADSRLME-----------------DALQLFDEMNKADAFL 97
Query: 227 WNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ 286
WN M+ G+ G Y + ++ + MV D T VI + A LE G+++HA +
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 287 KIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
K+G D YV +SLI +Y K G DA +F ++ E ++ W SMISG G G +
Sbjct: 158 KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLM 217
Query: 347 LFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYC------INPG-VEHC 399
LF+ ML G P+ + + + ACSHV +M K+++C I G V
Sbjct: 218 LFKEMLKCGFKPDRFSTMSALGACSHV-------YSPKMGKEIHCHAVRSRIETGDVMVM 270
Query: 400 TSMVDLYGRAG 410
TS++D+Y + G
Sbjct: 271 TSILDMYSKYG 281
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 230/483 (47%), Gaps = 44/483 (9%)
Query: 2 VFSLFREMQAKG--ACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSI 59
F + R+M A G ++ T+ + C E L K +H + L+ + ++ N+
Sbjct: 377 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF 436
Query: 60 LDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN 119
+ Y KC + YA+R+F + SK V SWN
Sbjct: 437 VASYAKCGSLSYAQRVFH-------------------------------GIRSKTVNSWN 465
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
+I G + R +L+ M +G T + LGK++HG +I
Sbjct: 466 ALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN 525
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
L D F+ S++ +Y CG + + +V WN++++GY+ NG
Sbjct: 526 WLERDLFVYLSVLSLYIHCGELCTVQALFDAM--------EDKSLVSWNTVITGYLQNGF 577
Query: 240 YEDCLKTFRSMV-HELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
+ L FR MV + + + I ++ V AC+ L GR+ HAY K DA++
Sbjct: 578 PDRALGVFRQMVLYGIQLCGI-SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIAC 636
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
SLI MY+K+GS+ + +F + E + W +MI G +HG K+A LFE M G P
Sbjct: 637 SLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP 696
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
+++TFLGV+ AC+H GL+ EG Y MK + + P ++H ++D+ GRAG L +
Sbjct: 697 DDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRV 756
Query: 419 IFENGISHL-TSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHR 477
+ E +WKS LSSCR+H+N+EMG+ V+ L ++ P PE Y+LLSN+ +
Sbjct: 757 VAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGK 816
Query: 478 WDE 480
W++
Sbjct: 817 WED 819
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 155/370 (41%), Gaps = 45/370 (12%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
P+ +T V K C+ ++ +G VH +++ G+ DV + N+++ Y
Sbjct: 185 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGT---------- 234
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
G V +L +F +P +++VSWN++I G+ +
Sbjct: 235 ---------------------HGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 136 ELLFCMVE---NGTEFSEV-TFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSL 191
LL M+E +G +V T + LGK +HG + L L+ + +N++L
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333
Query: 192 VEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMV 251
++MY KCG A +I K N+ +V WN+MV G+ G R M+
Sbjct: 334 MDMYSKCGCITNAQMIFK--------MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 252 H--ELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGS 309
E D T+ + C + L +++H Y K + V ++ + Y+K GS
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 310 LDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINA 369
L A +F I V W ++I G A + + M G++P+ T +++A
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 370 CSHVGLLEEG 379
CS + L G
Sbjct: 506 CSKLKSLRLG 515
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 144/354 (40%), Gaps = 31/354 (8%)
Query: 54 VLVNSILDLYL----KCKAFEYAERLFELTG-----EGDVVTWNIMIRAYLGAGDVEKSL 104
+LV L L L K K E ++ +L D V +I Y G + S
Sbjct: 81 LLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSR 140
Query: 105 DMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSE-VTFXXXXXXXXXX 163
+F L SK++ WN +I R LE M+ + T+
Sbjct: 141 FVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGM 200
Query: 164 XXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGG 223
V +G +HG V+ L D F+ ++LV Y G A + +P
Sbjct: 201 SDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP--------ERN 252
Query: 224 IVPWNSMVSGYVWNGKYEDCLKTFRSMVHELA----IVDIRTVTTVISACANAGLLEFGR 279
+V WNSM+ + NG E+ M+ E + D+ T+ TV+ CA + G+
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
Query: 280 QMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHG 339
+H + K+ + + ++L+ MYSK G + +A +IF+ N NV W +M+ G + G
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 340 KGKQASSLFEGMLNQG--IVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYC 391
+ ML G + +EVT L + C H ++ +K+++C
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH-------ESFLPSLKELHC 419
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 224 bits (571), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 139/455 (30%), Positives = 225/455 (49%), Gaps = 45/455 (9%)
Query: 29 SAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWN 88
SA + ++LG+ H ++ +N + +V+VNS++ +Y +C
Sbjct: 329 SALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRC---------------------- 366
Query: 89 IMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEF 148
G V KS +F ++ +DVVSWNT+I ++ G + L L++ M + G +
Sbjct: 367 ---------GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKI 417
Query: 149 SEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVIL 208
+T E+GKQ H +I + + +NS L++MY K G L
Sbjct: 418 DYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSG--------L 468
Query: 209 KDVPLNLLRTGNSG--GIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVI 266
+ L WNSM+SGY NG E FR M+ + + TV +++
Sbjct: 469 IRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASIL 528
Query: 267 SACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVF 326
AC+ G ++ G+Q+H + + + +V S+L+ MYSK+G++ A +F Q E N
Sbjct: 529 PACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSV 588
Query: 327 LWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM 386
+T+MI G HG G++A SLF M GI P+ +TF+ V++ACS+ GL++EG F M
Sbjct: 589 TYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648
Query: 387 KDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGIS-HLTSVWKSFLSSCRLHKNIE 445
++VY I P EH + D+ GR G + E F+ G ++ +W S L SC+LH +E
Sbjct: 649 REVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELE 708
Query: 446 MGKWVSEMLLQVAP-SDPEAY-ILLSNMCTSNHRW 478
+ + VSE L + + Y +LLSNM +W
Sbjct: 709 LAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKW 743
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 183/413 (44%), Gaps = 45/413 (10%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F + M+ K P+ + +VF S ++++ + ML+ G D
Sbjct: 202 FGIMMRMEVK---PSPVSFVNVFPAVSISRSIKKANVFYGLMLKLG------------DE 246
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y+K D+ + I Y GD+E S +F + +++ WNT+I
Sbjct: 247 YVK-----------------DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 123 DGLIRCGYERRALELLFCMVENGTEFS-EVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
++ ++EL + + S EVT+ VELG+Q HG V
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
I +SL+ MY +CG K+ + + +V WN+M+S +V NG +
Sbjct: 350 ELPIVIVNSLMVMYSRCGSVHKS--------FGVFLSMRERDVVSWNTMISAFVQNGLDD 401
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
+ L M + +D TVT ++SA +N E G+Q HA++ + G + + + S LI
Sbjct: 402 EGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLI 460
Query: 302 HMYSKSGSLDDAWVIFR--QINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
MYSKSG + + +F E + W SMISG +G ++ +F ML Q I PN
Sbjct: 461 DMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPN 520
Query: 360 EVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCL 412
VT ++ ACS +G ++ G Y ++ V +++VD+Y +AG +
Sbjct: 521 AVTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAI 572
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 188/434 (43%), Gaps = 59/434 (13%)
Query: 17 NQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKC----KAFEYA 72
+ YT SS K C+ KNL+ GK VH ++R ++ V+ NS++++Y+ C FEY
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEY- 164
Query: 73 ERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYER 132
DVV +F N+ K+VV+WNT+I ++ G
Sbjct: 165 ----------DVVR------------------KVFDNMRRKNVVAWNTLISWYVKTGRNA 196
Query: 133 RALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN--GDNFINSS 190
A M+ + S V+F ++ +G ++ L D F+ SS
Sbjct: 197 EACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSS 256
Query: 191 LVEMYCKCGRTDKASVILKD-VPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRS 249
+ MY + G + + + V N I WN+M+ YV N + ++ F
Sbjct: 257 AISMYAELGDIESSRRVFDSCVERN---------IEVWNTMIGVYVQNDCLVESIELFLE 307
Query: 250 MVHELAIVDIRTVTTVISACANAGL--LEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKS 307
+ IV VT +++A A + L +E GRQ H ++ K + + +SL+ MYS+
Sbjct: 308 AIGSKEIVS-DEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRC 366
Query: 308 GSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVI 367
GS+ ++ +F + E +V W +MIS +G + L M QG + +T ++
Sbjct: 367 GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL 426
Query: 368 NACSHVGLLEEGSTYFRMMKDVYCINPGVEH---CTSMVDLYGRAGCLIETKNFIFENG- 423
+A S++ E G + I G++ + ++D+Y ++G LI +FE
Sbjct: 427 SAASNLRNKEIGK-----QTHAFLIRQGIQFEGMNSYLIDMYSKSG-LIRISQKLFEGSG 480
Query: 424 -ISHLTSVWKSFLS 436
+ W S +S
Sbjct: 481 YAERDQATWNSMIS 494
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 138/321 (42%), Gaps = 10/321 (3%)
Query: 98 GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSE---VTFX 154
G+ + + +F +P V WNTII G I AL L + ++ F+ T+
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEAL-LFYSRMKKTAPFTNCDAYTYS 111
Query: 155 XXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLN 214
++ GK +H +I N +++SL+ MY C + DV
Sbjct: 112 STLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSC--LNAPDCFEYDVVRK 169
Query: 215 LLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGL 274
+ +V WN+++S YV G+ + + F M+ + V A + +
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 275 LEFGRQMHAYIQKIGHRI--DAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMI 332
++ + + K+G D +V SS I MY++ G ++ + +F E N+ +W +MI
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 333 SGCALHGKGKQASSLF-EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYC 391
+ ++ LF E + ++ IV +EVT+L +A S + +E G + + +
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 392 INPGVEHCTSMVDLYGRAGCL 412
P V S++ +Y R G +
Sbjct: 350 ELPIV-IVNSLMVMYSRCGSV 369
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 62/106 (58%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F +FR+M + PN T++S+ CS ++ LGK +H + +R +D +V + ++++D
Sbjct: 505 TFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVD 564
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMF 107
+Y K A +YAE +F T E + VT+ MI Y G E+++ +F
Sbjct: 565 MYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLF 610
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 100/227 (44%), Gaps = 24/227 (10%)
Query: 225 VPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIV--DIRTVTTVISACANAGLLEFGRQMH 282
V WN+++ G++ N + L + M D T ++ + ACA L+ G+ +H
Sbjct: 71 VLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVH 130
Query: 283 AYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAW------VIFRQINEPNVFLWTSMISGCA 336
++ + V +SL++MY + D + +F + NV W ++IS
Sbjct: 131 CHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYV 190
Query: 337 LHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM--------KD 388
G+ +A F M+ + P+ V+F+ V A S +++ + ++ +M KD
Sbjct: 191 KTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKD 250
Query: 389 VYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFL 435
++ + +S + +Y G IE+ +F++ + VW + +
Sbjct: 251 LFVV-------SSAISMYAELGD-IESSRRVFDSCVERNIEVWNTMI 289
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 243/485 (50%), Gaps = 10/485 (2%)
Query: 3 FSLFREM-QAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F LF EM + +G + +TLS++ C+ L G+ +H +R G+ ++ + N+++
Sbjct: 269 FDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIG 328
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
Y K + E L+E+ D VT+ MI AY+ G V+ ++++F N+ K+ +++N +
Sbjct: 329 FYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNAL 388
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
+ G R G+ +AL+L M++ G E ++ + ++ +Q+HG I
Sbjct: 389 MAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGT 448
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ I ++L++M +C R A + P NL + + S++ GY NG +
Sbjct: 449 AFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKAT------TSIIGGYARNGLPD 502
Query: 242 DCLKTF-RSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
+ F R++ + +D ++T +++ C G E G Q+H Y K G+ D +G+SL
Sbjct: 503 KAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSL 562
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
I MY+K DDA IF + E +V W S+IS L G +A +L+ M + I P+
Sbjct: 563 ISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDI 622
Query: 361 VTFLGVINACSHV--GLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
+T VI+A + L F MK +Y I P EH T+ V + G G L E ++
Sbjct: 623 ITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDT 682
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRW 478
I + SV ++ L SCR+H N + K V++++L P P YIL SN+ +++ W
Sbjct: 683 INSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFW 742
Query: 479 DEAAM 483
+ M
Sbjct: 743 HRSEM 747
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 180/470 (38%), Gaps = 66/470 (14%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
FR +A PN+YT ++ C LG +H ++++G V + NS++ LY
Sbjct: 168 FFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYD 227
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
K + L +F +P +DV SWNT++
Sbjct: 228 KD-----------------------------SGSSCDDVLKLFDEIPQRDVASWNTVVSS 258
Query: 125 LIRCGYERRALELLFCMVE-NGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
L++ G +A +L + M G T + G++LHGR I + L
Sbjct: 259 LVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQ 318
Query: 184 DNFINSSLVEMYCKCGRTDKASVILK-----------------------DVPLNLLRTGN 220
+ +N++L+ Y K K + + D + +
Sbjct: 319 ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT 378
Query: 221 SGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQ 280
+ +N++++G+ NG LK F M+ + ++T+ + AC + Q
Sbjct: 379 EKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQ 438
Query: 281 MHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ--INEPNVFLWTSMISGCALH 338
+H + K G + + ++L+ M ++ + DA +F Q N + TS+I G A +
Sbjct: 439 IHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARN 498
Query: 339 GKGKQASSLFEGML-NQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPG-- 395
G +A SLF L Q + +EV+ ++ C +G E G Y + G
Sbjct: 499 GLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQI-----HCYALKAGYF 553
Query: 396 --VEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKN 443
+ S++ +Y + C + IF H W S +S L +N
Sbjct: 554 SDISLGNSLISMYAKC-CDSDDAIKIFNTMREHDVISWNSLISCYILQRN 602
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 157/360 (43%), Gaps = 52/360 (14%)
Query: 88 NIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENG-T 146
N +I YL G +++ +F +L S VVS+ +I G R E AL++ F M + G
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 147 EFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASV 206
+ +E TF LG Q+HG ++ F+++SL+ +Y DK S
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLY------DKDSG 231
Query: 207 ILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVH-ELAIVDIRTVTTV 265
D L L + WN++VS V GK F M E VD T++T+
Sbjct: 232 SSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTL 291
Query: 266 ISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSK------------------- 306
+S+C ++ +L GR++H +IG + V ++LI YSK
Sbjct: 292 LSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDA 351
Query: 307 ------------SGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQ 354
G +D A IF + E N + ++++G +G G +A LF ML +
Sbjct: 352 VTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQR 411
Query: 355 GIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCI------NPGVEHCTSMVDLYGR 408
G+ + + ++AC GL+ E ++ +CI NP ++ T+++D+ R
Sbjct: 412 GVELTDFSLTSAVDAC---GLVSEKKVSEQIHG--FCIKFGTAFNPCIQ--TALLDMCTR 464
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 275 LEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISG 334
+E + +HA K+ +G++LI Y K G +A ++F ++ P V +T++ISG
Sbjct: 96 VEVTKAVHASFLKLREE-KTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISG 154
Query: 335 CALHGKGKQASSLFEGMLNQGIV-PNEVTFLGVINACSHVGLLEEG 379
+ +A +F M G+V PNE TF+ ++ AC V G
Sbjct: 155 FSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLG 200
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 226/480 (47%), Gaps = 45/480 (9%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
++ + G P+ +T VFK C ++ GK +H + + G D+ + NS++ Y
Sbjct: 94 YKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGV 153
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL 125
C G+ + +F +P +DVVSW II G
Sbjct: 154 C-------------------------------GESRNACKVFGEMPVRDVVSWTGIITGF 182
Query: 126 IRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDN 185
R G + AL+ M E + T+ + LGK +HG ++ A
Sbjct: 183 TRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISL 239
Query: 186 FINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLK 245
++L++MY KC + A + ++ V WNSM+SG V + ++ +
Sbjct: 240 ETGNALIDMYVKCEQLSDAMRVFGEL--------EKKDKVSWNSMISGLVHCERSKEAID 291
Query: 246 TFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMY 304
F M I D +T+V+SACA+ G ++ GR +H YI G + D ++G++++ MY
Sbjct: 292 LFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMY 351
Query: 305 SKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFL 364
+K G ++ A IF I NVF W +++ G A+HG G ++ FE M+ G PN VTFL
Sbjct: 352 AKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFL 411
Query: 365 GVINACSHVGLLEEGSTYFRMMKDV-YCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
+NAC H GL++EG YF MK Y + P +EH M+DL RAG L E +
Sbjct: 412 AALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMP 471
Query: 424 ISHLTSVWKSFLSSCRLHKNI-EMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
+ + + LS+C+ + E+ K + + L + D Y+LLSN+ +N RWD+ A
Sbjct: 472 VKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVA 531
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 162/371 (43%), Gaps = 23/371 (6%)
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
S+NT++ C R + V NG TF + GKQ+HG V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
+ D ++ +SLV Y CG + A + ++P+ +V W +++G+
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVR--------DVVSWTGIITGFTR 184
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
G Y++ L TF M E ++ T V+ + G L G+ +H I K I
Sbjct: 185 TGLYKEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLET 241
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGM-LNQG 355
G++LI MY K L DA +F ++ + + W SMISG + K+A LF M + G
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG 301
Query: 356 IVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVE---HC-TSMVDLYGRAGC 411
I P+ V++AC+ +G ++ G R + + Y + G++ H T++VD+Y + G
Sbjct: 302 IKPDGHILTSVLSACASLGAVDHG----RWVHE-YILTAGIKWDTHIGTAIVDMYAKCG- 355
Query: 412 LIETKNFIFENGISHLTSVWKSFLSSCRLHKN-IEMGKWVSEMLLQVAPSDPEAYILLSN 470
IET IF S W + L +H + +E ++ EM+ + ++ N
Sbjct: 356 YIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALN 415
Query: 471 MCTSNHRWDEA 481
C DE
Sbjct: 416 ACCHTGLVDEG 426
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 12/238 (5%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
KQ+ ++IT L D+ I + +V K D AS V L+ +R+ S +N+
Sbjct: 23 KQIQTQLITRDLLRDDLIINKVVTFLGKSA--DFAS--YSSVILHSIRSVLSS--FSYNT 76
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG 289
++S Y K + +++ V D+ T V AC + G+Q+H + K+G
Sbjct: 77 LLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMG 136
Query: 290 HRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFE 349
D YV +SL+H Y G +A +F ++ +V WT +I+G G K+A F
Sbjct: 137 FYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFS 196
Query: 350 GMLNQGIVPNEVTFLGVINACSHVGLLEEGS-TYFRMMKDVYCINPGVEHCTSMVDLY 406
M + PN T++ V+ + VG L G + ++K I+ +E +++D+Y
Sbjct: 197 KM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS--LETGNALIDMY 249
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 38/215 (17%)
Query: 5 LFREMQ-AKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
LF MQ + G P+ + L+SV C++ + G+ VH ++L G+ D + +I+D+Y
Sbjct: 292 LFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMY 351
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
KC E A +F + SK+V +WN ++
Sbjct: 352 AKCGYIETALEIFN-------------------------------GIRSKNVFTWNALLG 380
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGK----QLHGRVITL 179
GL G+ +L MV+ G + + VTF V+ G+ ++ R L
Sbjct: 381 GLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNL 440
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLN 214
+++ ++++ C+ G D+A ++K +P+
Sbjct: 441 FPKLEHY--GCMIDLLCRAGLLDEALELVKAMPVK 473
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 240/478 (50%), Gaps = 32/478 (6%)
Query: 13 GACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYA 72
G ++++LS V K CS ++ G +H ++ + G+ +D+ L N ++ LYLKC +
Sbjct: 116 GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLS 175
Query: 73 ERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS--KDVVSWNTIIDGLIRCGY 130
++F+ + D V++N MI Y+ G + + ++F +P K+++SWN++I G
Sbjct: 176 RQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISG------ 229
Query: 131 ERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVEL-GKQLHGRV------ITLALNG 183
+ +G + + F + G HGR+ +
Sbjct: 230 --------YAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR 281
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
D +++++ Y K G A + +P +V +NSM++GYV N + +
Sbjct: 282 DVVTWATMIDGYAKLGFVHHAKTLFDQMPHR--------DVVAYNSMMAGYVQNKYHMEA 333
Query: 244 LKTFRSMVHELAIV-DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
L+ F M E ++ D T+ V+ A A G L MH YI + + +G +LI
Sbjct: 334 LEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALID 393
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MYSK GS+ A ++F I ++ W +MI G A+HG G+ A + + + P+++T
Sbjct: 394 MYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDIT 453
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
F+GV+NACSH GL++EG F +M+ + I P ++H MVD+ R+G + KN I E
Sbjct: 454 FVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEM 513
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
+ +W++FL++C HK E G+ V++ L+ A +P +Y+LLSNM S W +
Sbjct: 514 PVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKD 571
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 158/346 (45%), Gaps = 20/346 (5%)
Query: 50 DADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRN 109
+ D++ NS++D Y+K E A+ LF++ DVVTW MI Y G V + +F
Sbjct: 249 EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQ 308
Query: 110 LPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEF--SEVTFXXXXXXXXXXXXVE 167
+P +DVV++N+++ G ++ Y ALE +F +E + + T +
Sbjct: 309 MPHRDVVAYNSMMAGYVQNKYHMEALE-IFSDMEKESHLLPDDTTLVIVLPAIAQLGRLS 367
Query: 168 LGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPW 227
+H ++ + +L++MY KCG A ++ + + + I W
Sbjct: 368 KAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGI--------ENKSIDHW 419
Query: 228 NSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGR---QMHAY 284
N+M+ G +G E + D T V++AC+++GL++ G ++
Sbjct: 420 NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRR 479
Query: 285 IQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQ 343
KI R+ Y ++ + S+SGS++ A + ++ EPN +W + ++ C+ H + +
Sbjct: 480 KHKIEPRLQHY--GCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFET 537
Query: 344 ASSLFEGMLNQ-GIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
+ + ++ Q G P+ L N + G+ ++ MMK+
Sbjct: 538 GELVAKHLILQAGYNPSSYVLLS--NMYASFGMWKDVRRVRTMMKE 581
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 164/392 (41%), Gaps = 44/392 (11%)
Query: 113 KDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
+D WN +I R+AL LL M+ENG + + V+ G Q+
Sbjct: 84 EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCG-------------RTD------------KASVI 207
HG + L D F+ + L+ +Y KCG + D K +I
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLI 203
Query: 208 LKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVIS 267
+ L L ++ WNSM+SGY + D + + ++ D+ + ++I
Sbjct: 204 VSARELFDLMPMEMKNLISWNSMISGY---AQTSDGVDIASKLFADMPEKDLISWNSMID 260
Query: 268 ACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFL 327
G +E + + + R D +++I Y+K G + A +F Q+ +V
Sbjct: 261 GYVKHGRIEDAKGLFDVMP----RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVA 316
Query: 328 WTSMISGCALHGKGKQASSLFEGMLNQG-IVPNEVTFLGVINACSHVGLLEEG-STYFRM 385
+ SM++G + +A +F M + ++P++ T + V+ A + +G L + + +
Sbjct: 317 YNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYI 376
Query: 386 MKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIE 445
++ + + G + +++D+Y + G I+ +FE + W + + +H
Sbjct: 377 VEKQFYL--GGKLGVALIDMYSKCGS-IQHAMLVFEGIENKSIDHWNAMIGGLAIHG--- 430
Query: 446 MGKWVSEMLLQVA----PSDPEAYILLSNMCT 473
+G+ +MLLQ+ D ++ + N C+
Sbjct: 431 LGESAFDMLLQIERLSLKPDDITFVGVLNACS 462
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 3/184 (1%)
Query: 171 QLHGRVITLALNGDNFINSSLVEMYCKCGR---TDKASVILKDVPLNLLRTGNSGGIVPW 227
Q+HGR+I + ++ + + +V + R D A + + + G W
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLW 89
Query: 228 NSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK 287
N+++ + L M+ VD +++ V+ AC+ G ++ G Q+H +++K
Sbjct: 90 NAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKK 149
Query: 288 IGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSL 347
G D ++ + LI +Y K G L + +F ++ + + + SMI G G A L
Sbjct: 150 TGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAREL 209
Query: 348 FEGM 351
F+ M
Sbjct: 210 FDLM 213
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 235/466 (50%), Gaps = 38/466 (8%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
F EM++ G PN +T S++ CSA ++L GK +H+ ++ G + + N+++D+Y+K
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL 125
C A E VE S +F + S +VVSW T+I GL
Sbjct: 373 CSASE-----------------------------VEAS-RVFGAMVSPNVVSWTTLILGL 402
Query: 126 IRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDN 185
+ G+ + LL MV+ E + VT V ++H ++ ++G+
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEM 462
Query: 186 FINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLK 245
+ +SLV+ Y + D A N++R+ + + S+V+ + GK+E L
Sbjct: 463 VVGNSLVDAYASSRKVDYA--------WNVIRSMKRRDNITYTSLVTRFNELGKHEMALS 514
Query: 246 TFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYS 305
M + +D ++ ISA AN G LE G+ +H Y K G A V +SL+ MYS
Sbjct: 515 VINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYS 574
Query: 306 KSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLG 365
K GSL+DA +F +I P+V W ++SG A +G A S FE M + P+ VTFL
Sbjct: 575 KCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLI 634
Query: 366 VINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGIS 425
+++ACS+ L + G YF++MK +Y I P VEH +V + GRAG L E + +
Sbjct: 635 LLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLK 694
Query: 426 HLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNM 471
++K+ L +CR N+ +G+ ++ L +APSDP YILL+++
Sbjct: 695 PNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADL 740
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 176/372 (47%), Gaps = 41/372 (11%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
SLF EM A G PN++T SSV + C+ +++ G VH +++ G + + V+ +S+ DL
Sbjct: 109 LSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDL 168
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC G +++ ++F +L + D +SW +I
Sbjct: 169 YSKC-------------------------------GQFKEACELFSSLQNADTISWTMMI 197
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
L+ R AL+ MV+ G +E TF +E GK +H +I +
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTF-VKLLGASSFLGLEFGKTIHSNIIVRGIP 256
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ + +SLV+ Y + + + A + +L + + W S+VSG+V N + ++
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDA--------VRVLNSSGEQDVFLWTSVVSGFVRNLRAKE 308
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
+ TF M + T + ++S C+ L+FG+Q+H+ K+G VG++L+
Sbjct: 309 AVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVD 368
Query: 303 MYSK-SGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
MY K S S +A +F + PNV WT++I G HG + L M+ + + PN V
Sbjct: 369 MYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVV 428
Query: 362 TFLGVINACSHV 373
T GV+ ACS +
Sbjct: 429 TLSGVLRACSKL 440
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 211/483 (43%), Gaps = 52/483 (10%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+ EM G PN++T + S+ L+ GK +H+ ++ G+ +VVL S++D
Sbjct: 210 LQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDF 268
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y + E A R+ +GE DV W ++ ++ RNL +K+ V T +
Sbjct: 269 YSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFV------------RNLRAKEAV--GTFL 314
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
E R+L G + + T+ ++ GKQ+H + I +
Sbjct: 315 --------EMRSL---------GLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFE 357
Query: 183 GDNFINSSLVEMYCKCGRTD-KASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ ++LV+MY KC ++ +AS + + S +V W +++ G V +G +
Sbjct: 358 DSTDVGNALVDMYMKCSASEVEASRVFGAMV--------SPNVVSWTTLILGLVDHGFVQ 409
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
DC MV ++ T++ V+ AC+ + ++HAY+ + + VG+SL+
Sbjct: 410 DCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLV 469
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
Y+ S +D AW + R + + +TS+++ GK + A S+ M GI +++
Sbjct: 470 DAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQL 529
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCT----SMVDLYGRAGCLIETKN 417
+ G I+A +++G LE G Y + G S+VD+Y + G L + K
Sbjct: 530 SLPGFISASANLGALETGKHL-----HCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKK 584
Query: 418 FIFENGISHLTSVWKSFLSSCRLHKNIEMG-KWVSEMLLQVAPSDPEAYILLSNMCTSNH 476
+FE + W +S + I EM ++ D +++L + C++
Sbjct: 585 -VFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGR 643
Query: 477 RWD 479
D
Sbjct: 644 LTD 646
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 166/376 (44%), Gaps = 49/376 (13%)
Query: 35 QLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAY 94
++G +H +++ G+ ++ L N++L LYLK A +LF+ V W +MI A+
Sbjct: 40 RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAF 99
Query: 95 LGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFX 154
+ + +L +F M+ +GT +E TF
Sbjct: 100 TKSQEFASALSLFEE-------------------------------MMASGTHPNEFTFS 128
Query: 155 XXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLN 214
+ G ++HG VI G++ + SSL ++Y KCG+ +A
Sbjct: 129 SVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEAC--------E 180
Query: 215 LLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGL 274
L + + + W M+S V K+ + L+ + MV + T ++ A + GL
Sbjct: 181 LFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL 240
Query: 275 LEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISG 334
EFG+ +H+ I G ++ + +SL+ YS+ ++DA + E +VFLWTS++SG
Sbjct: 241 -EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 335 CALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINP 394
+ + K+A F M + G+ PN T+ +++ CS V L+ G I
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQ-----TIKV 354
Query: 395 GVEHCT----SMVDLY 406
G E T ++VD+Y
Sbjct: 355 GFEDSTDVGNALVDMY 370
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 8/259 (3%)
Query: 224 IVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHA 283
+ W M+S + + ++ L F M+ + T ++V+ +CA + +G ++H
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 284 YIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQ 343
+ K G ++ VGSSL +YSK G +A +F + + WT MIS K ++
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWRE 208
Query: 344 ASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMV 403
A + M+ G+ PNE TF+ ++ A S +G LE G T + V I V TS+V
Sbjct: 209 ALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNII-VRGIPLNVVLKTSLV 266
Query: 404 DLYGRAGCLIETKNFIFENGISHL---TSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPS 460
D Y + + + + +G + TSV F+ + R + + G ++ L + P+
Sbjct: 267 DFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAV--GTFLEMRSLGLQPN 324
Query: 461 DPEAYILLSNMCTSNHRWD 479
+ +LS +C++ D
Sbjct: 325 NFTYSAILS-LCSAVRSLD 342
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
M S+ M G +Q +L + L+ GK +H + +++G ++NS++
Sbjct: 511 MALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLV 570
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKD 114
D+Y KC + E A+++FE DVV+WN ++ G + +L F + K+
Sbjct: 571 DMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKE 624
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 221 bits (564), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 234/475 (49%), Gaps = 24/475 (5%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
S+F M K LS+ + E+ L K W L V N +L +
Sbjct: 178 SVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL--------VSWNCLLGGF 229
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
+K K A + F+ DVV+WN +I Y +G ++++ +F P +DV +W ++
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
G I+ A EL M E +EV++ +E+ K+L + ++
Sbjct: 290 GYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
N +++ Y +CG+ +A + +P V W +M++GY +G +
Sbjct: 346 WN----TMITGYAQCGKISEAKNLFDKMP--------KRDPVSWAAMIAGYSQSGHSFEA 393
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
L+ F M E ++ + ++ +S CA+ LE G+Q+H + K G+ +VG++L+ M
Sbjct: 394 LRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLM 453
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
Y K GS+++A +F+++ ++ W +MI+G + HG G+ A FE M +G+ P++ T
Sbjct: 454 YCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATM 513
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
+ V++ACSH GL+++G YF M Y + P +H MVDL GRAG L + N +
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRW 478
++W + L + R+H N E+ + ++ + + P + Y+LLSN+ S+ RW
Sbjct: 574 FEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRW 628
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 182/418 (43%), Gaps = 55/418 (13%)
Query: 54 VLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK 113
V N ++ YL+ FE A +LF+ E D+V+WN+MI+ Y+ ++ K+ ++F +P +
Sbjct: 96 VSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER 155
Query: 114 DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
DV SWNT++ G + G A + M E ++V++ +E
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKME------ 205
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSG 233
L + +N+ +LV C G K I++ + N +V WN++++G
Sbjct: 206 -EACMLFKSRENW---ALVSWNCLLGGFVKKKKIVE--ARQFFDSMNVRDVVSWNTIITG 259
Query: 234 YVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMH----------- 282
Y +GK ++ R + E + D+ T T ++S ++E R++
Sbjct: 260 YAQSGKIDEA----RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSW 315
Query: 283 -----AYIQKIGHRID-------------AYVGSSLIHMYSKSGSLDDAWVIFRQINEPN 324
Y+Q G R++ +++I Y++ G + +A +F ++ + +
Sbjct: 316 NAMLAGYVQ--GERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373
Query: 325 VFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGST-YF 383
W +MI+G + G +A LF M +G N +F ++ C+ V LE G +
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433
Query: 384 RMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH 441
R++K Y G +++ +Y + G IE N +F+ W + ++ H
Sbjct: 434 RLVKGGY--ETGCFVGNALLLMYCKCGS-IEEANDLFKEMAGKDIVSWNTMIAGYSRH 488
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 30/259 (11%)
Query: 192 VEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMV 251
+ Y + GR ++A + K +P V +N M+SGY+ NG++E K F M
Sbjct: 71 ISSYMRTGRCNEALRVFKRMP--------RWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 252 HELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLD 311
D+ + +I L R++ +I D ++++ Y+++G +D
Sbjct: 123 ER----DLVSWNVMIKGYVRNRNLGKARELF----EIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 312 DAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACS 371
DA +F ++ E N W +++S + K ++A LF+ N +V G +
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 372 HVGLLEEGSTYFRMM--KDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTS 429
V E +F M +DV N +++ Y ++G + E + E+ + + +
Sbjct: 235 IV----EARQFFDSMNVRDVVSWN-------TIITGYAQSGKIDEARQLFDESPVQDVFT 283
Query: 430 VWKSFLSSCRLHKNIEMGK 448
W + +S ++ +E +
Sbjct: 284 -WTAMVSGYIQNRMVEEAR 301
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 230/462 (49%), Gaps = 41/462 (8%)
Query: 20 TLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELT 79
T+ S+ C+ + G +H++ +++G+++++ + N ++DLY + +++F+
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD-- 306
Query: 80 GEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLF 139
R Y+ +D++SWN+II RA+ L
Sbjct: 307 ------------RMYV-----------------RDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 140 CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA-LNGDNFINSSLVEMYCKC 198
M + + +T + + + G + D I +++V MY K
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 199 GRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVD 258
G D A + +P + ++ WN+++SGY NG + ++ + M E I
Sbjct: 398 GLVDSARAVFNWLP--------NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449
Query: 259 IR-TVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF 317
+ T +V+ AC+ AG L G ++H + K G +D +V +SL MY K G L+DA +F
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 318 RQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLE 377
QI N W ++I+ HG G++A LF+ ML++G+ P+ +TF+ +++ACSH GL++
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569
Query: 378 EGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSS 437
EG F MM+ Y I P ++H MVD+YGRAG L FI + S+W + LS+
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 438 CRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
CR+H N+++GK SE L +V P ++LLSNM S +W+
Sbjct: 630 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWE 671
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 213/484 (44%), Gaps = 57/484 (11%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
FSLF M + G P+ T SV K C + + G +H L+ G DV + S++ L
Sbjct: 140 FSLF--MLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHL 194
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y + KA A LF+ D+ +WN MI Y +G+ +++L + L + D V+ +++
Sbjct: 195 YSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLL 254
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G R G +H I L
Sbjct: 255 SACTEAGDFNR-----------------------------------GVTIHSYSIKHGLE 279
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ F+++ L+++Y + GR + + + ++ WNS++ Y N +
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR--------DLISWNSIIKAYELNEQPLR 331
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI-DAYVGSSLI 301
+ F+ M D T+ ++ S + G + R + + + G + D +G++++
Sbjct: 332 AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVV 391
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG-IVPNE 360
MY+K G +D A +F + +V W ++ISG A +G +A ++ M +G I N+
Sbjct: 392 VMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQ 451
Query: 361 VTFLGVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFI 419
T++ V+ ACS G L +G + R++K+ ++ V TS+ D+YG+ G L + +
Sbjct: 452 GTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV--VTSLADMYGKCGRLEDALSLF 509
Query: 420 FENGISHLTSV-WKSFLSSCRLHKNIEMGKWV-SEMLLQVAPSDPEAYILLSNMCTSNHR 477
++ I + SV W + ++ H + E + EML + D ++ L + C+ +
Sbjct: 510 YQ--IPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGL 567
Query: 478 WDEA 481
DE
Sbjct: 568 VDEG 571
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 134/286 (46%), Gaps = 16/286 (5%)
Query: 90 MIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELL-FCMVENGTEF 148
++ Y G+V + F ++ ++DV +WN +I G R G + M+ +G
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 149 SEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVIL 208
TF V G ++H + D ++ +SL+ +Y + A ++
Sbjct: 152 DYRTF---PSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208
Query: 209 KDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISA 268
++P+ + + WN+M+SGY +G ++ L ++ + L +D TV +++SA
Sbjct: 209 DEMPVRDMGS--------WNAMISGYCQSGNAKEAL----TLSNGLRAMDSVTVVSLLSA 256
Query: 269 CANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLW 328
C AG G +H+Y K G + +V + LI +Y++ G L D +F ++ ++ W
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316
Query: 329 TSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVG 374
S+I L+ + +A SLF+ M I P+ +T + + + S +G
Sbjct: 317 NSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 26/283 (9%)
Query: 166 VELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIV 225
++ K LH R++ + I++ LV +YC G A + + +
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHI--------QNRDVY 118
Query: 226 PWNSMVSGYVWNGKYEDCLKTFR-SMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY 284
WN M+SGY G + ++ F M+ D RT +V+ AC + G ++H
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDGNKIHCL 175
Query: 285 IQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQA 344
K G D YV +SLIH+YS+ ++ +A ++F ++ ++ W +MISG G K+A
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 345 SSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH----CT 400
+L G+ + VT + +++AC+ G G T Y I G+E
Sbjct: 236 LTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHS-----YSIKHGLESELFVSN 286
Query: 401 SMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKN 443
++DLY G L + + + L S W S + + L++
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLIS-WNSIIKAYELNEQ 328
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 216/463 (46%), Gaps = 42/463 (9%)
Query: 20 TLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELT 79
TL + + + L+LG +H+ + G + ++ + LY KC
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC------------- 269
Query: 80 GEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLF 139
G ++ +FR D+V++N +I G G +L L
Sbjct: 270 ------------------GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFK 311
Query: 140 CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG 199
++ +G T + +HG + ++++L +Y K
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLN 368
Query: 200 RTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDI 259
+ A + + P L + WN+M+SGY NG ED + FR M +
Sbjct: 369 EIESARKLFDESPEKSLPS--------WNAMISGYTQNGLTEDAISLFREMQKSEFSPNP 420
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
T+T ++SACA G L G+ +H ++ YV ++LI MY+K GS+ +A +F
Sbjct: 421 VTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL 480
Query: 320 INEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
+ + N W +MISG LHG+G++A ++F MLN GI P VTFL V+ ACSH GL++EG
Sbjct: 481 MTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG 540
Query: 380 STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCR 439
F M Y P V+H MVD+ GRAG L FI I +SVW++ L +CR
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600
Query: 440 LHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
+HK+ + + VSE L ++ P + ++LLSN+ +++ + +AA
Sbjct: 601 IHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAA 643
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 185/426 (43%), Gaps = 43/426 (10%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
PN T + S ++ + G+ +H + +G D++++L ++I+ +Y K E A ++
Sbjct: 117 PNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKV 176
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
F+ E D + WN MI Y +S+ +FR+L ++ +T L
Sbjct: 177 FDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTT-----------LL 225
Query: 136 ELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMY 195
++L + E + LG Q+H +++ + + +Y
Sbjct: 226 DILPAVAE-------------------LQELRLGMQIHSLATKTGCYSHDYVLTGFISLY 266
Query: 196 CKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELA 255
KCG+ S L R IV +N+M+ GY NG+ E L F+ ++ L+
Sbjct: 267 SKCGKIKMGSA--------LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM--LS 316
Query: 256 IVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWV 315
+R+ +T++S +G L +H Y K A V ++L +YSK ++ A
Sbjct: 317 GARLRS-STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARK 375
Query: 316 IFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGL 375
+F + E ++ W +MISG +G + A SLF M PN VT +++AC+ +G
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGA 435
Query: 376 LEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFL 435
L G +++ + T+++ +Y + G + E + +F+ W + +
Sbjct: 436 LSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARR-LFDLMTKKNEVTWNTMI 493
Query: 436 SSCRLH 441
S LH
Sbjct: 494 SGYGLH 499
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/466 (21%), Positives = 189/466 (40%), Gaps = 80/466 (17%)
Query: 40 VHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGD 99
HA ++ +G D+ L+ + A YA +F DV +N+++R +
Sbjct: 39 THAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNES 98
Query: 100 VEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXX 159
SL +F +L R++ +L + + T+
Sbjct: 99 PHSSLSVFAHL---------------------RKSTDL---------KPNSSTYAFAISA 128
Query: 160 XXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTG 219
G+ +HG+ + + + + S++V+MY K R + A + +P
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP------- 181
Query: 220 NSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFG 278
+ WN+M+SGY N Y + ++ FR +++E +D T+ ++ A A L G
Sbjct: 182 -EKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLG 240
Query: 279 RQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALH 338
Q+H+ K G YV + I +YSK G + +FR+ +P++ + +MI G +
Sbjct: 241 MQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSN 300
Query: 339 GKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH 398
G+ + + SLF+ ++ G T + ++ H+ L+ Y +K + + V
Sbjct: 301 GETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGY--CLKSNFLSHASV-- 356
Query: 399 CTSMVDLYGR------AGCLIE-----------------TKNFIFENGISHLTSVWKS-- 433
T++ +Y + A L + T+N + E+ IS + KS
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 434 ---------FLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSN 470
LS+C + +GKWV ++ V +D E+ I +S
Sbjct: 417 SPNPVTITCILSACAQLGALSLGKWVHDL---VRSTDFESSIYVST 459
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
SLFREMQ PN T++ + C+ L LGK VH + ++ + + +++ +Y
Sbjct: 406 SLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMY 465
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMF 107
KC + A RLF+L + + VTWN MI Y G +++L++F
Sbjct: 466 AKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIF 509
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 213/414 (51%), Gaps = 51/414 (12%)
Query: 72 AERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYE 131
A ++F E +VV W MI YL D+ + F P +D+V WNT+I G I
Sbjct: 47 ANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI----- 101
Query: 132 RRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFIN-SS 190
E+G L R + + + ++ ++
Sbjct: 102 -----------------------------------EMGNMLEARSLFDQMPCRDVMSWNT 126
Query: 191 LVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSM 250
++E Y G + + D+P + WN ++ GY NG+ + L +F+ M
Sbjct: 127 VLEGYANIGDMEACERVFDDMP--------ERNVFSWNGLIKGYAQNGRVSEVLGSFKRM 178
Query: 251 VHELAIV-DIRTVTTVISACANAGLLEFGRQMHAYIQKIGH-RIDAYVGSSLIHMYSKSG 308
V E ++V + T+T V+SACA G +FG+ +H Y + +G+ ++D V ++LI MY K G
Sbjct: 179 VDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCG 238
Query: 309 SLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
+++ A +F+ I ++ W +MI+G A HG G +A +LF M N GI P++VTF+GV+
Sbjct: 239 AIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLC 298
Query: 369 ACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLT 428
AC H+GL+E+G YF M + I P +EHC +VDL RAG L + FI + +
Sbjct: 299 ACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADA 358
Query: 429 SVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
+W + L + +++K +++G+ E L+++ P +P +++LSN+ R+D+AA
Sbjct: 359 VIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAA 412
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 117/264 (44%), Gaps = 43/264 (16%)
Query: 49 VDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFR 108
V+ +VVL S+++ YL K A R F+L+ E D+V WN MI Y+ G++ ++ +F
Sbjct: 55 VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFD 114
Query: 109 NLPSKDVVSWNTIIDGLIRCGYERRALELLF----------------------------- 139
+P +DV+SWNT+++G G + A E +F
Sbjct: 115 QMPCRDVMSWNTVLEGYANIG-DMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLG 173
Query: 140 ---CMVENGTEF-SEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG-DNFINSSLVEM 194
MV+ G+ ++ T + GK +H TL N D + ++L++M
Sbjct: 174 SFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDM 233
Query: 195 YCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHEL 254
Y KCG + A + K + ++ WN+M++G +G + L F M +
Sbjct: 234 YGKCGAIEIAMEVFKGIKRR--------DLISWNTMINGLAAHGHGTEALNLFHEMKNSG 285
Query: 255 AIVDIRTVTTVISACANAGLLEFG 278
D T V+ AC + GL+E G
Sbjct: 286 ISPDKVTFVGVLCACKHMGLVEDG 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 2 VFSLFREMQAKGAC-PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVD-ADVVLVNSI 59
V F+ M +G+ PN T++ V C+ GK VH + G + DV + N++
Sbjct: 171 VLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNAL 230
Query: 60 LDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV 115
+D+Y KC A E A +F+ D+++WN MI G ++L++F + + +
Sbjct: 231 IDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGI 286
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 246/489 (50%), Gaps = 39/489 (7%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
++ +M G P+ + ++SV + C +N+ GK +HA L+NG+ V + ++ LY
Sbjct: 91 VYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYS 150
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
+ E A++ F+ E + V+WN ++ YL +G+++++ +F +P KD VSWN II
Sbjct: 151 RLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISS 210
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL--- 181
+ G A L F + +G ++ R + LA
Sbjct: 211 YAKKGDMGNACSL---------------FSAMPLKSPASWNILIGGYVNCREMKLARTYF 255
Query: 182 ------NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
NG ++I +++ Y K G A L R + + +++M++ Y
Sbjct: 256 DAMPQKNGVSWI--TMISGYTKLGDVQSAE--------ELFRLMSKKDKLVYDAMIACYT 305
Query: 236 WNGKYEDCLKTFRSMVHELAIV--DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRID 293
NGK +D LK F M+ + + D T+++V+SA + G FG + +YI + G +ID
Sbjct: 306 QNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKID 365
Query: 294 AYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLN 353
+ +SLI +Y K G A+ +F +N+ + +++MI GC ++G +A+SLF M+
Sbjct: 366 DLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIE 425
Query: 354 QGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLI 413
+ I PN VTF G+++A SH GL++EG F MKD + + P +H MVD+ GRAG L
Sbjct: 426 KKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLE 484
Query: 414 ETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYIL-LSNMC 472
E I + VW + L + LH N+E G+ +++ +DP Y+ L+ +
Sbjct: 485 EAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLE-TDPTGYLSHLAMIY 543
Query: 473 TSNHRWDEA 481
+S RWD+A
Sbjct: 544 SSVGRWDDA 552
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 226/470 (48%), Gaps = 41/470 (8%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
SL+R M G+ P+ ++ + K C++ G+ +H + + G + + ++ +++ +Y
Sbjct: 39 SLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMY 98
Query: 64 LKCKAFEYAERLFELTGEGD--VVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
KC A ++FE + V +N +I Y V + MFR
Sbjct: 99 CKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRR------------ 146
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
M E G VT + LG+ LHG+ + L
Sbjct: 147 -------------------MKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGL 187
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ + + +S + MY KCG + + ++P+ G++ WN+++SGY NG
Sbjct: 188 DSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVK--------GLITWNAVISGYSQNGLAY 239
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
D L+ + M D T+ +V+S+CA+ G + G ++ ++ G + +V ++ I
Sbjct: 240 DVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASI 299
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
MY++ G+L A +F + ++ WT+MI +HG G+ LF+ M+ +GI P+
Sbjct: 300 SMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGA 359
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
F+ V++ACSH GL ++G FR MK Y + PG EH + +VDL GRAG L E FI
Sbjct: 360 VFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIES 419
Query: 422 NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNM 471
+ +VW + L +C++HKN++M + +++ P++ Y+L+SN+
Sbjct: 420 MPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNI 469
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 160/365 (43%), Gaps = 9/365 (2%)
Query: 118 WNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
WN + L ++ L M+ +G+ +F G+QLH V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
+ F+ ++L+ MYCKCG A + ++ P +S V +N+++SGY N
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENP------QSSQLSVCYNALISGYTAN 134
Query: 238 GKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVG 297
K D FR M VD T+ ++ C L GR +H K G + V
Sbjct: 135 SKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVL 194
Query: 298 SSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV 357
+S I MY K GS++ +F ++ + W ++ISG + +G L+E M + G+
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 358 PNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKN 417
P+ T + V+++C+H+G + G ++++ + P V + + +Y R G L + +
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV-PNVFVSNASISMYARCGNLAKARA 313
Query: 418 FIFENGISHLTSVWKSFLSSCRLHKNIEMGKWV-SEMLLQVAPSDPEAYILLSNMCTSNH 476
+ L S W + + +H E+G + +M+ + D ++++ + C+ +
Sbjct: 314 VFDIMPVKSLVS-WTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSG 372
Query: 477 RWDEA 481
D+
Sbjct: 373 LTDKG 377
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 169/403 (41%), Gaps = 52/403 (12%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+FR M+ G + T+ + C+ + L LG+ +H ++ G+D++V ++NS + +Y+
Sbjct: 143 MFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYM 202
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC G VE +F +P K +++WN +I G
Sbjct: 203 KC-------------------------------GSVEAGRRLFDEMPVKGLITWNAVISG 231
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+ G LEL M +G T ++G ++ V + +
Sbjct: 232 YSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPN 291
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
F++++ + MY +CG KA + +P+ L V W +M+ Y +G E L
Sbjct: 292 VFVSNASISMYARCGNLAKARAVFDIMPVKSL--------VSWTAMIGCYGMHGMGEIGL 343
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ---KIGHRIDAYVGSSLI 301
F M+ D V+SAC+++GL + G ++ ++ K+ + Y S L+
Sbjct: 344 MLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHY--SCLV 401
Query: 302 HMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+ ++G LD+A + EP+ +W +++ C +H A F ++ PN
Sbjct: 402 DLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNN 459
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMM--KDVYCINPG---VEH 398
+ + +++ +EG R+M + + PG VEH
Sbjct: 460 IGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEH 502
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI 285
PWN + + + + + +RSM+ + D + ++ +CA+ L G+Q+H ++
Sbjct: 20 PWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVF--LWTSMISGCALHGKGKQ 343
K G + +V ++LI MY K G + DA +F + + + + ++ISG + K
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 344 ASSLFEGMLNQGIVPNEVTFLGVINACS 371
A+ +F M G+ + VT LG++ C+
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCT 167
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V L+ +M++ G CP+ +TL SV C+ ++G V + NG +V + N+ +
Sbjct: 241 VLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASIS 300
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAY--LGAGDVEKSL--DMFRNLPSKDVVS 117
+Y +C A +F++ +V+W MI Y G G++ L DM + D
Sbjct: 301 MYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAV 360
Query: 118 WNTIIDGLIRCGYERRALELLFCM 141
+ ++ G + LEL M
Sbjct: 361 FVMVLSACSHSGLTDKGLELFRAM 384
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 231/482 (47%), Gaps = 40/482 (8%)
Query: 2 VFSLFREMQAKGAC-PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
V LF+ M G PN++ + VFK CS ++ GK H L+ G+ + + N+++
Sbjct: 119 VLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLV 178
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
+Y C A R+ + D+ ++ + YL G ++ LD+ R ++D V WN
Sbjct: 179 YMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNN 237
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+ T+ + L Q+H R++
Sbjct: 238 L------------------------------TYLSSLRLFSNLRDLNLALQVHSRMVRFG 267
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
N + +L+ MY KCG+ A + D ++ I +++ Y + +
Sbjct: 268 FNAEVEACGALINMYGKCGKVLYAQRVFDDT--------HAQNIFLNTTIMDAYFQDKSF 319
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
E+ L F M + + T ++++ A LL+ G +H + K G+R VG++L
Sbjct: 320 EEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNAL 379
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
++MY+KSGS++DA F + ++ W +MISGC+ HG G++A F+ M+ G +PN
Sbjct: 380 VNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNR 439
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
+TF+GV+ ACSH+G +E+G YF + + + P ++H T +V L +AG + ++F+
Sbjct: 440 ITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMR 499
Query: 421 ENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
I W++ L++C + +N +GK V+E ++ P+D Y+LLSN+ + W+
Sbjct: 500 TAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEG 559
Query: 481 AA 482
A
Sbjct: 560 VA 561
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 187/426 (43%), Gaps = 47/426 (11%)
Query: 21 LSSVFKCCSAEKNLQLGKGVHAWML---RNGVDADVVLVNSILDLYLKCKAFEYAERLFE 77
L+ + K C+ L++G+ +HA ++ ++ D +NS+++LY+KC+ A +LF+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 78 LTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALEL 137
L +P ++VVSW ++ G G++ L+L
Sbjct: 94 L-------------------------------MPERNVVSWCAMMKGYQNSGFDFEVLKL 122
Query: 138 LFCMVENG-TEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYC 196
M +G + +E +E GKQ HG + L F+ ++LV MY
Sbjct: 123 FKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYS 182
Query: 197 KCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI 256
C +A +L D+P L ++S +SGY+ G +++ L R +E +
Sbjct: 183 LCSGNGEAIRVLDDLPYCDLSV--------FSSALSGYLECGAFKEGLDVLRKTANEDFV 234
Query: 257 VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVI 316
+ T + + +N L Q+H+ + + G + +LI+MY K G + A +
Sbjct: 235 WNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRV 294
Query: 317 FRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLL 376
F + N+FL T+++ ++A +LF M + + PNE TF ++N+ + + LL
Sbjct: 295 FDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLL 354
Query: 377 EEGSTYFRM-MKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFL 435
++G + +K Y V ++V++Y ++G IE F W + +
Sbjct: 355 KQGDLLHGLVLKSGY--RNHVMVGNALVNMYAKSGS-IEDARKAFSGMTFRDIVTWNTMI 411
Query: 436 SSCRLH 441
S C H
Sbjct: 412 SGCSHH 417
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 259 IRTVTTVISACANAGLLEFGRQMHAYI---QKIGHRIDAYVGSSLIHMYSKSGSLDDAWV 315
I + ++ CAN+ L G +HA++ + DAY +SLI++Y K A
Sbjct: 31 IDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARK 90
Query: 316 IFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG-IVPNEVTFLGVINACSHVG 374
+F + E NV W +M+ G G + LF+ M G PNE V +CS+ G
Sbjct: 91 LFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSG 150
Query: 375 LLEEGSTY 382
+EEG +
Sbjct: 151 RIEEGKQF 158
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 199/381 (52%), Gaps = 12/381 (3%)
Query: 106 MFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXX 165
+F ++P D +N++I + + M+ + S TF
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 166 VELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIV 225
+ +GK +H + D ++ ++LV Y KCG + A + +P IV
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP--------EKSIV 174
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI 285
WNS+VSG+ NG ++ ++ F M D T +++SACA G + G +H YI
Sbjct: 175 AWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYI 234
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQAS 345
G ++ +G++LI++YS+ G + A +F ++ E NV WT+MIS HG G+QA
Sbjct: 235 ISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAV 294
Query: 346 SLFEGMLNQ-GIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVD 404
LF M + G +PN VTF+ V++AC+H GL+EEG + ++ M Y + PGVEH MVD
Sbjct: 295 ELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVD 354
Query: 405 LYGRAGCLIETKNFIFE---NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSD 461
+ GRAG L E FI + G + ++W + L +C++H+N ++G +++ L+ + P +
Sbjct: 355 MLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDN 414
Query: 462 PEAYILLSNMCTSNHRWDEAA 482
P +++LSN+ + + DE +
Sbjct: 415 PGHHVMLSNIYALSGKTDEVS 435
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 155/342 (45%), Gaps = 47/342 (13%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
+ +R M + P+ YT +SV K C+ L++GKGVH + +G D + +++ Y
Sbjct: 93 AYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFY 152
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
KC GD+E + +F +P K +V+WN+++
Sbjct: 153 SKC-------------------------------GDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
G + G A+++ + M E+G E TF V LG +H +I+ L+
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL 241
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ + ++L+ +Y +CG KA + + + W +M+S Y +G +
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKM--------KETNVAAWTAMISAYGTHGYGQQA 293
Query: 244 LKTFRSMVHELA-IVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS--L 300
++ F M + I + T V+SACA+AGL+E GR ++ + K +R+ V +
Sbjct: 294 VELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTK-SYRLIPGVEHHVCM 352
Query: 301 IHMYSKSGSLDDAWVIFRQINEPN----VFLWTSMISGCALH 338
+ M ++G LD+A+ Q++ LWT+M+ C +H
Sbjct: 353 VDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMH 394
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 225/481 (46%), Gaps = 79/481 (16%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ ++FREM P++Y+ + V K C+A + G+ +H +++G+ DV + N+++
Sbjct: 123 VALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLV 182
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
++Y + FE A ++ + +P +D VSWN+
Sbjct: 183 NVYGRSGYFEIARKVLD-------------------------------RMPVRDAVSWNS 211
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
++ + G A L M E E
Sbjct: 212 LLSAYLEKGLVDEARALFDEMEERNVE--------------------------------- 238
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
NF ++ Y G +A + +P+ +V WN+MV+ Y G Y
Sbjct: 239 --SWNF----MISGYAAAGLVKEAKEVFDSMPVR--------DVVSWNAMVTAYAHVGCY 284
Query: 241 EDCLKTFRSMVHE-LAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
+ L+ F M+ + D T+ +V+SACA+ G L G +H YI K G I+ ++ ++
Sbjct: 285 NEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATA 344
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
L+ MYSK G +D A +FR ++ +V W S+IS ++HG GK A +F M+ +G PN
Sbjct: 345 LVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPN 404
Query: 360 EVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFI 419
+TF+GV++AC+HVG+L++ F MM VY + P +EH MVDL GR G + E + +
Sbjct: 405 GITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELV 464
Query: 420 FENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
E + + +S L +C+ +E + ++ LL++ D Y +SN+ S+ RW+
Sbjct: 465 NEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWE 524
Query: 480 E 480
+
Sbjct: 525 K 525
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 129/339 (38%), Gaps = 78/339 (23%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
+Q H ++ L D F S LV + +V LN R G+ G NS
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAF--AATNPEPKTVSYAHSILN--RIGSPNGFT-HNS 110
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG 289
++ Y + E L FR M+ D + T V+ ACA E GRQ+H K G
Sbjct: 111 VIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSG 170
Query: 290 HRIDAYVGSSLIHMYSKSGS-------------------------------LDDAWVIFR 318
D +V ++L+++Y +SG +D+A +F
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFD 230
Query: 319 QINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV--------------------- 357
++ E NV W MISG A G K+A +F+ M + +V
Sbjct: 231 EMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEV 290
Query: 358 -----------PNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVE----HCTSM 402
P+ T + V++AC+ +G L +G VY G+E T++
Sbjct: 291 FNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWV-----HVYIDKHGIEIEGFLATAL 345
Query: 403 VDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH 441
VD+Y + G I+ +F S W S +S +H
Sbjct: 346 VDMYSKCGK-IDKALEVFRATSKRDVSTWNSIISDLSVH 383
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 225/482 (46%), Gaps = 40/482 (8%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
+ L M+ G P+Q T + +L++G+ +H +++ G D D+ L +++
Sbjct: 229 ILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALIT 288
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+YLKC E + R+ E +P+KDVV W +
Sbjct: 289 MYLKCGKEEASYRVLE-------------------------------TIPNKDVVCWTVM 317
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
I GL+R G +AL + M+++G++ S +LG +HG V+
Sbjct: 318 ISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGY 377
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
D +SL+ MY KCG DK+ VI + + N +V WN+++SGY N
Sbjct: 378 TLDTPALNSLITMYAKCGHLDKSLVIFERM--------NERDLVSWNAIISGYAQNVDLC 429
Query: 242 DCLKTFRSM-VHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
L F M + VD TV +++ AC++AG L G+ +H + + R + V ++L
Sbjct: 430 KALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTAL 489
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+ MYSK G L+ A F I+ +V W +I+G HGKG A ++ L+ G+ PN
Sbjct: 490 VDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
V FL V+++CSH G++++G F M + + P EH +VDL RA + + F
Sbjct: 550 VIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYK 609
Query: 421 ENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
EN V L +CR + E+ + E ++++ P D Y+ L + + RWD+
Sbjct: 610 ENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDD 669
Query: 481 AA 482
+
Sbjct: 670 VS 671
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 180/437 (41%), Gaps = 48/437 (10%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V S F M A P+ +T S+ K C++ + L G +H +L NG +D + +S+++
Sbjct: 30 VLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVN 89
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
LY K +A ++FE + +DVV W +
Sbjct: 90 LYAKFGLLAHARKVFE-------------------------------EMRERDVVHWTAM 118
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
I R G A L+ M G + VT ++ LH +
Sbjct: 119 IGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGF 175
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ D + +S++ +YCKC A +L +V WN+M+SGY G
Sbjct: 176 DCDIAVMNSMLNLYCKCDHVGDAK--------DLFDQMEQRDMVSWNTMISGYASVGNMS 227
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
+ LK M + D +T +S LE GR +H I K G +D ++ ++LI
Sbjct: 228 EILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALI 287
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
MY K G + ++ + I +V WT MISG G+ ++A +F ML G +
Sbjct: 288 TMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSE 347
Query: 362 TFLGVINACSHVGLLEEG-STYFRMMKDVYCIN-PGVEHCTSMVDLYGRAGCLIETKNFI 419
V+ +C+ +G + G S + +++ Y ++ P + S++ +Y + G L + I
Sbjct: 348 AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL---NSLITMYAKCGHL-DKSLVI 403
Query: 420 FENGISHLTSVWKSFLS 436
FE W + +S
Sbjct: 404 FERMNERDLVSWNAIIS 420
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 11/213 (5%)
Query: 227 WNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ 286
+NS ++ +G ++ L TF SM+ + D T +++ ACA+ L FG +H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 287 KIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
G D Y+ SSL+++Y+K G L A +F ++ E +V WT+MI + G +A S
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 347 LFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD---VYCINPGVEHCTSMV 403
L M QGI P VT L +++ G+LE T + + D +Y + + SM+
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLS-----GVLE--ITQLQCLHDFAVIYGFDCDIAVMNSML 186
Query: 404 DLYGRAGCLIETKNFIFENGISHLTSVWKSFLS 436
+LY + + + K+ + + S W + +S
Sbjct: 187 NLYCKCDHVGDAKDLFDQMEQRDMVS-WNTMIS 218
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 17/249 (6%)
Query: 118 WNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
+N+ I+ L G ++ L M+ N TF + G +H +V+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
+ D +I+SSLV +Y K G A + +++ +V W +M+ Y
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEM--------RERDVVHWTAMIGCYSRA 125
Query: 238 GKY-EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQ--MHAYIQKIGHRIDA 294
G E C S+V+E+ I+ + +G+LE + +H + G D
Sbjct: 126 GIVGEAC-----SLVNEMRFQGIKPGPVTLLEML-SGVLEITQLQCLHDFAVIYGFDCDI 179
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQ 354
V +S++++Y K + DA +F Q+ + ++ W +MISG A G + L M
Sbjct: 180 AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD 239
Query: 355 GIVPNEVTF 363
G+ P++ TF
Sbjct: 240 GLRPDQQTF 248
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 242/506 (47%), Gaps = 59/506 (11%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V +LF E++ +G P+ +TL V K + + G+ VH + ++ G++ D + NS++
Sbjct: 30 VLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMG 89
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y G +E + +F +P +DVVSWN +
Sbjct: 90 MYASL-------------------------------GKIEITHKVFDEMPQRDVVSWNGL 118
Query: 122 IDGLIRCGYERRALELLFCMV-ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
I + G A+ + M E+ +F E T +E+G++++ R +
Sbjct: 119 ISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTE 177
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILK-----------------------DVPLNLLR 217
I ++LV+M+CKCG DKA + D L
Sbjct: 178 FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFE 237
Query: 218 TGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEF 277
+V W +M++GYV ++++ L+ FR M D + ++++ CA G LE
Sbjct: 238 RSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQ 297
Query: 278 GRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCAL 337
G+ +H YI + +D VG++L+ MY+K G ++ A +F +I E + WTS+I G A+
Sbjct: 298 GKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAM 357
Query: 338 HGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVE 397
+G +A L+ M N G+ + +TF+ V+ AC+H G + EG F M + + + P E
Sbjct: 358 NGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSE 417
Query: 398 HCTSMVDLYGRAGCLIETKNFIFE---NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEML 454
HC+ ++DL RAG L E + I + L V+ S LS+ R + N+++ + V+E L
Sbjct: 418 HCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKL 477
Query: 455 LQVAPSDPEAYILLSNMCTSNHRWDE 480
+V SD A+ LL+++ S +RW++
Sbjct: 478 EKVEVSDSSAHTLLASVYASANRWED 503
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 127/275 (46%), Gaps = 20/275 (7%)
Query: 213 LNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANA 272
++LL+T + ++ +N M+ + L F + + D T+ V+ +
Sbjct: 3 MSLLQTPS---LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRL 59
Query: 273 GLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMI 332
+ G ++H Y K G D+YV +SL+ MY+ G ++ +F ++ + +V W +I
Sbjct: 60 RKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLI 119
Query: 333 SGCALHGKGKQASSLFEGMLNQGIVP-NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYC 391
S +G+ + A +F+ M + + +E T + ++ACS + LE G +R + V
Sbjct: 120 SSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV--VTE 177
Query: 392 INPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKS----FLSSCRLHKNIEMG 447
V ++VD++ + GCL + + +F++ W S ++S+ R+ +
Sbjct: 178 FEMSVRIGNALVDMFCKCGCLDKARA-VFDSMRDKNVKCWTSMVFGYVSTGRIDE----- 231
Query: 448 KWVSEMLLQVAP-SDPEAYILLSNMCTSNHRWDEA 481
+ +L + +P D + + N +R+DEA
Sbjct: 232 ---ARVLFERSPVKDVVLWTAMMNGYVQFNRFDEA 263
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 227/483 (46%), Gaps = 39/483 (8%)
Query: 2 VFSLFREMQAKGAC-PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
S +EM + G PN+Y S K CS+ G +H +++ + + + S+
Sbjct: 253 ALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLC 312
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
D+Y +C A R+F+ + D SWN
Sbjct: 313 DMYARCGFLNSARRVFD-------------------------------QIERPDTASWNV 341
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
II GL GY A+ + M +G ++ + G Q+H +I
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWG 401
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
D + +SL+ MY C + +D N+ V WN++++ + + +
Sbjct: 402 FLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR-------NNADSVSWNTILTACLQHEQP 454
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
+ L+ F+ M+ D T+ ++ C L+ G Q+H Y K G + ++ + L
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGL 514
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
I MY+K GSL A IF ++ +V W+++I G A G G++A LF+ M + GI PN
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
VTF+GV+ ACSHVGL+EEG + M+ + I+P EHC+ +VDL RAG L E + FI
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFID 634
Query: 421 ENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
E + VWK+ LS+C+ N+ + + +E +L++ P + A++LL +M S+ W+
Sbjct: 635 EMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEN 694
Query: 481 AAM 483
AA+
Sbjct: 695 AAL 697
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 201/459 (43%), Gaps = 55/459 (11%)
Query: 20 TLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELT 79
T S+ CS+ ++L G+ +H +L + D +L N IL +Y KC + A +F+
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDF- 127
Query: 80 GEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLF 139
+P +++VS+ ++I G + G A+ L
Sbjct: 128 ------------------------------MPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 140 CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG 199
M++ + F V LGKQLH +VI L + ++L+ MY +
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFN 217
Query: 200 RTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDI 259
+ AS + +P+ ++ W+S+++G+ G + L + M+
Sbjct: 218 QMSDASRVFYGIPMK--------DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPN 269
Query: 260 RTV-TTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFR 318
+ + + AC++ ++G Q+H K +A G SL MY++ G L+ A +F
Sbjct: 270 EYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFD 329
Query: 319 QINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEE 378
QI P+ W +I+G A +G +A S+F M + G +P+ ++ ++ A + L +
Sbjct: 330 QIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQ 389
Query: 379 GSTYFRMMKDVYCINPG----VEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSV-WKS 433
G M Y I G + C S++ +Y L N +FE+ ++ SV W +
Sbjct: 390 G-----MQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFN-LFEDFRNNADSVSWNT 443
Query: 434 FLSSCRLHKN-IEMGKWVSEMLLQVAPSDPEAYILLSNM 471
L++C H+ +EM + ML V+ +P+ +I + N+
Sbjct: 444 ILTACLQHEQPVEMLRLFKLML--VSECEPD-HITMGNL 479
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 184/439 (41%), Gaps = 55/439 (12%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
L+ +M + P+Q+ S+ K C++ ++ LGK +HA +++ + ++ N+++ +Y+
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
+ A R+F +P KD++SW++II G
Sbjct: 215 RFNQMSDASRVF-------------------------------YGIPMKDLISWSSIIAG 243
Query: 125 LIRCGYERRALELLFCMVENGT-EFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
+ G+E AL L M+ G +E F + G Q+HG I L G
Sbjct: 244 FSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAG 303
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ SL +MY +CG + A + + WN +++G NG ++
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQI--------ERPDTASWNVIIAGLANNGYADEA 355
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
+ F M I D ++ +++ A L G Q+H+YI K G D V +SL+ M
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM 415
Query: 304 YSKSGSLDDAWVIFRQI-NEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
Y+ L + +F N + W ++++ C H + + LF+ ML P+ +T
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYC------INPGVEHCTSMVDLYGRAGCLIETK 416
++ C + L+ GS V+C + P ++D+Y + G L + +
Sbjct: 476 MGNLLRGCVEISSLKLGS-------QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQAR 528
Query: 417 NFIFENGISHLTSVWKSFL 435
IF++ + W + +
Sbjct: 529 R-IFDSMDNRDVVSWSTLI 546
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 133/296 (44%), Gaps = 11/296 (3%)
Query: 119 NTIIDGLIRCGYERRALELL-FCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
N I+ L + + R ALE F + + T+ + G+++H ++
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
D +N+ ++ MY KCG A + +P +V + S+++GY N
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP--------ERNLVSYTSVITGYSQN 146
Query: 238 GKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVG 297
G+ + ++ + M+ E + D ++I ACA++ + G+Q+HA + K+
Sbjct: 147 GQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ 206
Query: 298 SSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV 357
++LI MY + + DA +F I ++ W+S+I+G + G +A S + ML+ G+
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF 266
Query: 358 -PNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCL 412
PNE F + ACS + + GS + + C S+ D+Y R G L
Sbjct: 267 HPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC-SLCDMYARCGFL 321
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 237/480 (49%), Gaps = 47/480 (9%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+FR+M +G + + +SV C E +L+L + +H ++ G ++ + + N ++ Y
Sbjct: 263 IFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYS 322
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC G +E +F + ++VVSW T+I
Sbjct: 323 KC-------------------------------GVLEAVKSVFHQMSERNVVSWTTMISS 351
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+ A+ + M +G +EVTF ++ G ++HG I +
Sbjct: 352 -----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSE 406
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ +S + +Y K + A +D+ I+ WN+M+SG+ NG + L
Sbjct: 407 PSVGNSFITLYAKFEALEDAKKAFEDITFR--------EIISWNAMISGFAQNGFSHEAL 458
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEF--GRQMHAYIQKIGHRIDAYVGSSLIH 302
K F S E + + T +V++A A A + G++ HA++ K+G V S+L+
Sbjct: 459 KMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLD 517
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MY+K G++D++ +F ++++ N F+WTS+IS + HG + +LF M+ + + P+ VT
Sbjct: 518 MYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVT 577
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
FL V+ AC+ G++++G F MM +VY + P EH + MVD+ GRAG L E + + E
Sbjct: 578 FLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
S+ +S L SCRLH N++MG V+E+ +++ P +Y+ + N+ WD+AA
Sbjct: 638 PGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAA 697
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 160/355 (45%), Gaps = 21/355 (5%)
Query: 84 VVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVE 143
V N ++ Y AG + +L +F NL DVVSWNTI+ G + AL + M
Sbjct: 111 VCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKS 167
Query: 144 NGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDK 203
G F T+ LG QL V+ L D + +S + MY + G
Sbjct: 168 AGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRG 227
Query: 204 ASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE-DCLKTFRSMVHELAIVDIRTV 262
A + ++ ++ WNS++SG G + + + FR M+ E +D +
Sbjct: 228 ARRVFDEMSFK--------DMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSF 279
Query: 263 TTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE 322
T+VI+ C + L+ RQ+H K G+ VG+ L+ YSK G L+ +F Q++E
Sbjct: 280 TSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSE 339
Query: 323 PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTY 382
NV WT+MIS A S+F M G+ PNEVTF+G+INA ++EG
Sbjct: 340 RNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKI 394
Query: 383 FRM-MKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLS 436
+ +K + P V + S + LY + L + K FE+ W + +S
Sbjct: 395 HGLCIKTGFVSEPSVGN--SFITLYAKFEALEDAKK-AFEDITFREIISWNAMIS 446
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 187/442 (42%), Gaps = 54/442 (12%)
Query: 9 MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKA 68
M++ G + +T S+ C + LG + + +++ G+++D+V+ NS + +Y +
Sbjct: 165 MKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSR--- 221
Query: 69 FEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRC 128
+G + +F + KD++SWN+++ GL +
Sbjct: 222 ----------------------------SGSFRGARRVFDEMSFKDMISWNSLLSGLSQE 253
Query: 129 G-YERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFI 187
G + A+ + M+ G E V+F ++L +Q+HG I +
Sbjct: 254 GTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEV 313
Query: 188 NSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTF 247
+ L+ Y KCG + + + + +V W +M+S +D + F
Sbjct: 314 GNILMSRYSKCGVLEAVKSVFHQM--------SERNVVSWTTMIS-----SNKDDAVSIF 360
Query: 248 RSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKS 307
+M + + T +I+A ++ G ++H K G + VG+S I +Y+K
Sbjct: 361 LNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKF 420
Query: 308 GSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVI 367
+L+DA F I + W +MISG A +G +A +F + +PNE TF V+
Sbjct: 421 EALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSVL 479
Query: 368 NACSHVGLLEEGSTYFRMMKDVYCINPGVEHC----TSMVDLYGRAGCLIETKNFIFENG 423
NA + E+ S + + G+ C ++++D+Y + G + E++ +F
Sbjct: 480 NA---IAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEK-VFNEM 535
Query: 424 ISHLTSVWKSFLSSCRLHKNIE 445
VW S +S+ H + E
Sbjct: 536 SQKNQFVWTSIISAYSSHGDFE 557
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 153/348 (43%), Gaps = 40/348 (11%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
S+F M+ G PN+ T + + ++ G +H ++ G ++ + NS + LY
Sbjct: 358 SIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLY 417
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
K +A E A++ FE ++++WN MI + G ++L MF
Sbjct: 418 AKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF---------------- 461
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
+ E E F V N F+E V+ G++ H ++ L LN
Sbjct: 462 --LSAAAETMPNEYTFGSVLNAIAFAE------------DISVKQGQRCHAHLLKLGLNS 507
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
++S+L++MY K G D++ + ++ + W S++S Y +G +E
Sbjct: 508 CPVVSSALLDMYAKRGNIDESEKVFNEM--------SQKNQFVWTSIISAYSSHGDFETV 559
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVG-SSLIH 302
+ F M+ E D+ T +V++AC G+++ G ++ + ++ + ++ S ++
Sbjct: 560 MNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVD 619
Query: 303 MYSKSGSLDDAWVIFRQI-NEPNVFLWTSMISGCALHGKGKQASSLFE 349
M ++G L +A + ++ P + SM+ C LHG K + + E
Sbjct: 620 MLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAE 667
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 26/276 (9%)
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
G Q+HG T ++++++ MY K GR D A I +++ +V WN
Sbjct: 95 GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLV--------DPDVVSWN 146
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
+++SG+ N + L M + D T +T +S C + G Q+ + + K
Sbjct: 147 TILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKT 203
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGK-GKQASSL 347
G D VG+S I MYS+SGS A +F +++ ++ W S++SG + G G +A +
Sbjct: 204 GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVI 263
Query: 348 FEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVY--CINPGVEHCTS---- 401
F M+ +G+ + V+F VI C H T ++ + ++ CI G E
Sbjct: 264 FRDMMREGVELDHVSFTSVITTCCH-------ETDLKLARQIHGLCIKRGYESLLEVGNI 316
Query: 402 MVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSS 437
++ Y + G L K+ + ++ S W + +SS
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSERNVVS-WTTMISS 351
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 223/480 (46%), Gaps = 40/480 (8%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F L + M G + TL+ V C + + K +HA + +G D ++ + N ++
Sbjct: 141 FVLLKRMLGSGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITS 199
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC ++G G +F + ++V++ +I
Sbjct: 200 YFKCGC--------SVSGRG-----------------------VFDGMSHRNVITLTAVI 228
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
GLI L L M + VT+ + G+Q+H + +
Sbjct: 229 SGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIE 288
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ I S+L++MY KCG + A I + + V ++ G NG E+
Sbjct: 289 SELCIESALMDMYSKCGSIEDAWTIFE--------STTEVDEVSMTVILVGLAQNGSEEE 340
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
++ F M+ +D V+ V+ L G+Q+H+ + K + +V + LI+
Sbjct: 341 AIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLIN 400
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MYSK G L D+ +FR++ + N W SMI+ A HG G A L+E M + P +VT
Sbjct: 401 MYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVT 460
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
FL +++ACSHVGL+++G MK+V+ I P EH T ++D+ GRAG L E K+FI
Sbjct: 461 FLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSL 520
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
+ +W++ L +C H + E+G++ +E L Q AP A+IL++N+ +S +W E A
Sbjct: 521 PLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERA 580
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 174/383 (45%), Gaps = 19/383 (4%)
Query: 84 VVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVE 143
+V WN ++ Y G + ++ +F +P +DV+S N + G +R LL M+
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 144 NGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDK 203
+G F T + K +H I + + + + L+ Y KCG +
Sbjct: 150 SGG-FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 204 ASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVT 263
+ + + ++ +++SG + N +ED L+ F M L + T
Sbjct: 209 GRGVFDGM--------SHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYL 260
Query: 264 TVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEP 323
+ ++AC+ + + G+Q+HA + K G + + S+L+ MYSK GS++DAW IF E
Sbjct: 261 SALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEV 320
Query: 324 NVFLWTSMISGCALHGKGKQASSLFEGMLNQG--IVPNEVT-FLGVINACSHVGLLEEGS 380
+ T ++ G A +G ++A F ML G I N V+ LGV + +GL ++
Sbjct: 321 DEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQ-- 378
Query: 381 TYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRL 440
+ ++K + N V + ++++Y + G L +++ +F W S +++
Sbjct: 379 LHSLVIKRKFSGNTFVNN--GLINMYSKCGDLTDSQT-VFRRMPKRNYVSWNSMIAAFAR 435
Query: 441 HKN-IEMGKWVSEM-LLQVAPSD 461
H + + K EM L+V P+D
Sbjct: 436 HGHGLAALKLYEEMTTLEVKPTD 458
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 235/482 (48%), Gaps = 45/482 (9%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
+F EM + G N++TLSS K CS ++LG+ H ++ +G + + + +++
Sbjct: 147 ALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAY 206
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
LY + A R+F+ +P DV+ W +
Sbjct: 207 LYGVNREPVDARRVFD-------------------------------EMPEPDVICWTAV 235
Query: 122 IDGLIRCGYERRALELLFCMVE-NGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+ + AL L + M G TF ++ GK++HG++IT
Sbjct: 236 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG 295
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
+ + + SSL++MY KCG +A + N + NS V W++++ GY NG++
Sbjct: 296 IGSNVVVESSLLDMYGKCGSVREARQVF-----NGMSKKNS---VSWSALLGGYCQNGEH 347
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
E ++ FR M + D+ TV+ ACA + G+++H + G + V S+L
Sbjct: 348 EKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESAL 403
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
I +Y KSG +D A ++ +++ N+ W +M+S A +G+G++A S F M+ +GI P+
Sbjct: 404 IDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDY 463
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
++F+ ++ AC H G+++EG YF +M Y I PG EH + M+DL GRAG E +N +
Sbjct: 464 ISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLE 523
Query: 421 ENGISHLTSVWKSFLSSCRLHKNI-EMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
+ S+W L C + + + + +++ ++++ P +Y+LLSNM + R
Sbjct: 524 RAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHG 583
Query: 480 EA 481
+A
Sbjct: 584 DA 585
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 209/471 (44%), Gaps = 50/471 (10%)
Query: 14 ACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAE 73
A P Y +S+ + C+ + G HA ++++G++ D + NS+L LY K
Sbjct: 59 ATPKLY--ASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFK-------- 108
Query: 74 RLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERR 133
LG G + ++ +F KD +SW +++ G + +
Sbjct: 109 ---------------------LGPG-MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVK 146
Query: 134 ALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVE 193
ALE+ MV G + +E T V LG+ HG VIT ++FI+S+L
Sbjct: 147 ALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAY 206
Query: 194 MYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHE 253
+Y A + ++P ++ W +++S + N YE+ L F +M
Sbjct: 207 LYGVNREPVDARRVFDEMP--------EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRG 258
Query: 254 LAIV-DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDD 312
+V D T TV++AC N L+ G+++H + G + V SSL+ MY K GS+ +
Sbjct: 259 KGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVRE 318
Query: 313 AWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSH 372
A +F +++ N W++++ G +G+ ++A +F M + + F V+ AC+
Sbjct: 319 ARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAG 374
Query: 373 VGLLEEGSTYFRMMKDVYCI-NPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVW 431
+ + G C N VE ++++DLYG++GC+ + I ++ + W
Sbjct: 375 LAAVRLGKEIHGQYVRRGCFGNVIVE--SALIDLYGKSGCIDSASRVYSKMSIRNMIT-W 431
Query: 432 KSFLSSCRLH-KNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
+ LS+ + + E + ++M+ + D ++I + C DE
Sbjct: 432 NAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 482
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 223/478 (46%), Gaps = 41/478 (8%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
F EM+ +G PN +T FK ++ + GK +HA ++ G DV + S D+Y K
Sbjct: 96 FFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCK 155
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL 125
+ + A +LF+ +P +++ +WN I
Sbjct: 156 TRLRDDARKLFD-------------------------------EIPERNLETWNAFISNS 184
Query: 126 IRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDN 185
+ G R A+E + +TF + LG QLHG V+ + D
Sbjct: 185 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV 244
Query: 186 FINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLK 245
+ + L++ Y KC + + +I + + T N+ V W S+V+ YV N + E
Sbjct: 245 SVCNGLIDFYGKCKQIRSSEIIFTE-----MGTKNA---VSWCSLVAAYVQNHEDEKASV 296
Query: 246 TFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYS 305
+ ++ +++V+SACA LE GR +HA+ K +VGS+L+ MY
Sbjct: 297 LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYG 356
Query: 306 KSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI--VPNEVTF 363
K G ++D+ F ++ E N+ S+I G A G+ A +LFE M +G PN +TF
Sbjct: 357 KCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTF 416
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
+ +++ACS G +E G F M+ Y I PG EH + +VD+ GRAG + FI +
Sbjct: 417 VSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMP 476
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
I SVW + ++CR+H ++G +E L ++ P D ++LLSN + RW EA
Sbjct: 477 IQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEA 534
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 148/331 (44%), Gaps = 11/331 (3%)
Query: 88 NIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTE 147
N +I Y E + + R P+++VVSW ++I GL + G+ AL F M G
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV 105
Query: 148 FSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVI 207
++ TF GKQ+H + D F+ S +MYCK D A +
Sbjct: 106 PNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKL 165
Query: 208 LKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVIS 267
++P L T WN+ +S V +G+ + ++ F + T ++
Sbjct: 166 FDEIPERNLET--------WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLN 217
Query: 268 ACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFL 327
AC++ L G Q+H + + G D V + LI Y K + + +IF ++ N
Sbjct: 218 ACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVS 277
Query: 328 WTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG-STYFRMM 386
W S+++ + + ++AS L+ + ++ V++AC+ + LE G S + +
Sbjct: 278 WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV 337
Query: 387 KDVYCINPGVEHCTSMVDLYGRAGCLIETKN 417
K C+ + +++VD+YG+ GC+ +++
Sbjct: 338 K--ACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 19/277 (6%)
Query: 166 VELGKQLHGRVI-TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGI 224
+ LG+ +H R++ TL F+ + L+ MY K + A ++L+ P + +
Sbjct: 22 MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTP--------ARNV 73
Query: 225 VPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY 284
V W S++SG NG + L F M E + + T A A+ L G+Q+HA
Sbjct: 74 VSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHAL 133
Query: 285 IQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQA 344
K G +D +VG S MY K+ DDA +F +I E N+ W + IS G+ ++A
Sbjct: 134 AVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREA 193
Query: 345 SSLFEGMLNQGIVPNEVTFLGVINACS---HVGL-LEEGSTYFRMMKDVYCINPGVEHCT 400
F PN +TF +NACS H+ L ++ R D V C
Sbjct: 194 IEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT-----DVSVCN 248
Query: 401 SMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSS 437
++D YG+ + ++ E G + S W S +++
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVS-WCSLVAA 284
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 221/463 (47%), Gaps = 39/463 (8%)
Query: 20 TLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELT 79
T ++ + C K+++ K V+ +M+ NG + + ++N IL +++KC A RLF+
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFD-- 182
Query: 80 GEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLF 139
+P +++ S+ +II G + G A EL
Sbjct: 183 -----------------------------EIPERNLYSYYSIISGFVNFGNYVEAFELFK 213
Query: 140 CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG 199
M E ++ TF + +GKQLH + L + + F++ L++MY KCG
Sbjct: 214 MMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCG 273
Query: 200 RTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDI 259
+ A + +P V WN++++GY +G E+ L M +D
Sbjct: 274 DIEDARCAFECMP--------EKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQ 325
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
T++ +I LE +Q HA + + G + ++L+ YSK G +D A +F +
Sbjct: 326 FTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDK 385
Query: 320 INEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
+ N+ W +++ G A HG+G A LFE M+ + PN VTFL V++AC++ GL E+G
Sbjct: 386 LPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQG 445
Query: 380 STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCR 439
F M +V+ I P H M++L GR G L E FI + ++W + L++CR
Sbjct: 446 WEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACR 505
Query: 440 LHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
+ +N+E+G+ V+E L + P Y+++ NM S + EAA
Sbjct: 506 MQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAA 548
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 142/338 (42%), Gaps = 41/338 (12%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F LF+ M + + +T + + + + ++ +GK +H L+ GV + + ++D+
Sbjct: 209 FELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDM 268
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC E A FE E V W N +I
Sbjct: 269 YSKCGDIEDARCAFECMPEKTTVAW-------------------------------NNVI 297
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G GY AL LL+ M ++G + T +EL KQ H +I
Sbjct: 298 AGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFE 357
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ N++LV+ Y K GR D A + +P I+ WN+++ GY +G+ D
Sbjct: 358 SEIVANTALVDFYSKWGRVDTARYVFDKLP--------RKNIISWNALMGGYANHGRGTD 409
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI-GHRIDAYVGSSLI 301
+K F M+ + T V+SACA +GL E G ++ + ++ G + A + +I
Sbjct: 410 AVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMI 469
Query: 302 HMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
+ + G LD+A R+ + V +W ++++ C +
Sbjct: 470 ELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQ 507
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/479 (29%), Positives = 250/479 (52%), Gaps = 40/479 (8%)
Query: 34 LQLGKGVHAWMLRNGVDA--DVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMI 91
++LG A L + VD+ +VV +++ YL+ K AE LF+ E +VV+WN MI
Sbjct: 88 IKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMI 147
Query: 92 RAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEV 151
Y +G ++K+L++F +P +++VSWN+++ L++ G A+ L M V
Sbjct: 148 DGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----V 203
Query: 152 TFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFIN-SSLVEMYCKCGRTDKASVILKD 210
++ V+ ++L + N I+ ++++ Y + R D+A + +
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFD-----CMPERNIISWNAMITGYAQNNRIDEADQLFQV 258
Query: 211 VP------LNLLRTG-----------------NSGGIVPWNSMVSGYVWNGKYEDCLKTF 247
+P N + TG ++ W +M++GYV N + E+ L F
Sbjct: 259 MPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVF 318
Query: 248 RSMVHELAI-VDIRTVTTVISACAN-AGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYS 305
M+ + ++ ++ T +++SAC++ AGL+E G+Q+H I K H+ + V S+L++MYS
Sbjct: 319 SKMLRDGSVKPNVGTYVSILSACSDLAGLVE-GQQIHQLISKSVHQKNEIVTSALLNMYS 377
Query: 306 KSGSLDDAWVIFRQ--INEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
KSG L A +F + + ++ W SMI+ A HG GK+A ++ M G P+ VT+
Sbjct: 378 KSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
L ++ ACSH GL+E+G +F+ + + EH T +VDL GRAG L + NFI +
Sbjct: 438 LNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDD 497
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
S + + LS+C +H + + K V + +L+ D Y+L+SN+ +N + +EAA
Sbjct: 498 ARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAA 556
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 159/347 (45%), Gaps = 20/347 (5%)
Query: 50 DADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRN 109
+ +++ N+++ Y + + A++LF++ E D +WN MI ++ ++ K+ +F
Sbjct: 230 ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDR 289
Query: 110 LPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEV-TFXXXXXXXXXXXXVEL 168
+P K+V+SW T+I G + AL + M+ +G+ V T+ +
Sbjct: 290 MPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
G+Q+H + + + S+L+ MY K G A + D L R ++ WN
Sbjct: 350 GQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMF-DNGLVCQR-----DLISWN 403
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI--- 285
SM++ Y +G ++ ++ + M T ++ AC++AGL+E G + +
Sbjct: 404 SMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRD 463
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFL----WTSMISGCALHGKG 341
+ + R + Y + L+ + ++G L D + IN + L + +++S C +H +
Sbjct: 464 ESLPLREEHY--TCLVDLCGRAGRLKD---VTNFINCDDARLSRSFYGAILSACNVHNEV 518
Query: 342 KQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
A + + +L G + T++ + N + G EE + MK+
Sbjct: 519 SIAKEVVKKVLETG-SDDAGTYVLMSNIYAANGKREEAAEMRMKMKE 564
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 191 LVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSM 250
L+ CK G+ +A + +P +V W +++GY+ G + + F +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLP--------ERDVVTWTHVITGYIKLGDMREARELFDRV 103
Query: 251 VHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSL 310
+V T T ++S + L + Q++ R + +++I Y++SG +
Sbjct: 104 DSRKNVV---TWTAMVSGYLRSKQLSIAEML---FQEMPER-NVVSWNTMIDGYAQSGRI 156
Query: 311 DDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINAC 370
D A +F ++ E N+ W SM+ G+ +A +LFE M + + V++ +++
Sbjct: 157 DKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGL 212
Query: 371 SHVGLLEEGSTYFRMMKDVYCIN 393
+ G ++E F M + I+
Sbjct: 213 AKNGKVDEARRLFDCMPERNIIS 235
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 227/479 (47%), Gaps = 40/479 (8%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V L+ M+ + + L K C L+ G +H ++NG+D D + S+++
Sbjct: 93 VLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVE 152
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y + E A+++F+ +P ++ V W +
Sbjct: 153 MYAQLGTMESAQKVFD-------------------------------EIPVRNSVLWGVL 181
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA- 180
+ G ++ + L M + G +T ++GK +HG I +
Sbjct: 182 MKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF 241
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
++ +++ +S+++MY KC D A L T +V W +++SG+ +
Sbjct: 242 IDQSDYLQASIIDMYVKCRLLDNAR--------KLFETSVDRNVVMWTTLISGFAKCERA 293
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
+ FR M+ E + + T+ ++ +C++ G L G+ +H Y+ + G +DA +S
Sbjct: 294 VEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSF 353
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
I MY++ G++ A +F + E NV W+SMI+ ++G ++A F M +Q +VPN
Sbjct: 354 IDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNS 413
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
VTF+ +++ACSH G ++EG F M Y + P EH MVDL GRAG + E K+FI
Sbjct: 414 VTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFID 473
Query: 421 ENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
+ + S W + LS+CR+HK +++ ++E LL + P Y+LLSN+ W+
Sbjct: 474 NMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWE 532
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 166/367 (45%), Gaps = 25/367 (6%)
Query: 81 EGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP--SKDVVSWNTIIDGLIR---CGYERRAL 135
E +VV + + AY+ + ++ + F +P ++ SWNTI+ G + C Y L
Sbjct: 36 EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSD-VL 94
Query: 136 ELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMY 195
L M + +E G +HG + L+ D+++ SLVEMY
Sbjct: 95 LLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMY 154
Query: 196 CKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELA 255
+ G + A + ++P+ NS V W ++ GY+ K + + F M
Sbjct: 155 AQLGTMESAQKVFDEIPVR-----NS---VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGL 206
Query: 256 IVDIRTVTTVISACANAGLLEFGRQMHAY-IQKIGHRIDAYVGSSLIHMYSKSGSLDDAW 314
+D T+ ++ AC N + G+ +H I++ Y+ +S+I MY K LD+A
Sbjct: 207 ALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNAR 266
Query: 315 VIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVG 374
+F + NV +WT++ISG A + +A LF ML + I+PN+ T ++ +CS +G
Sbjct: 267 KLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLG 326
Query: 375 LLEEGSTYFRMMKDVYCINPGVE----HCTSMVDLYGRAGCLIETKNFIFENGISHLTSV 430
L G + Y I G+E + TS +D+Y R G I+ +F+
Sbjct: 327 SLRHGKSVHG-----YMIRNGIEMDAVNFTSFIDMYARCGN-IQMARTVFDMMPERNVIS 380
Query: 431 WKSFLSS 437
W S +++
Sbjct: 381 WSSMINA 387
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 133/307 (43%), Gaps = 19/307 (6%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
+Q+H +VI + + SSL Y + R D A+ +P R +S WN+
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPC-WKRNRHS-----WNT 77
Query: 230 MVSGYVWNGK--YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK 287
++SGY + Y D L + M VD + I AC GLLE G +H K
Sbjct: 78 ILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMK 137
Query: 288 IGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSL 347
G D YV SL+ MY++ G+++ A +F +I N LW ++ G + K + L
Sbjct: 138 NGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRL 197
Query: 348 FEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYG 407
F M + G+ + +T + ++ AC +V + G + I+ S++D+Y
Sbjct: 198 FCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYV 257
Query: 408 RAGCLIETKNFIFENGISHLTSVWKSFLSS-CRLHKNIEMGKWVSEMLLQVAPSDPEAYI 466
+ L++ +FE + +W + +S + + +E +ML +
Sbjct: 258 KCR-LLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRES--------- 307
Query: 467 LLSNMCT 473
+L N CT
Sbjct: 308 ILPNQCT 314
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 224/449 (49%), Gaps = 44/449 (9%)
Query: 38 KGVHAWMLRNGVDADVVLVNSILDLYL----KCKAFEYAERLF-ELTGEGDVVTWNIMIR 92
+ +HA+ +R+GV + L YL YA ++F ++ +V WN +IR
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 93 AYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVT 152
Y G+ + ++R + + GL VE T T
Sbjct: 94 GYAEIGNSISAFSLYREMR----------VSGL----------------VEPDTH----T 123
Query: 153 FXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVP 212
+ V LG+ +H VI ++ +SL+ +Y CG A + +P
Sbjct: 124 YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP 183
Query: 213 LNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANA 272
+V WNS+++G+ NGK E+ L + M + D T+ +++SACA
Sbjct: 184 --------EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKI 235
Query: 273 GLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMI 332
G L G+++H Y+ K+G + + + L+ +Y++ G +++A +F ++ + N WTS+I
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLI 295
Query: 333 SGCALHGKGKQASSLFEGMLN-QGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYC 391
G A++G GK+A LF+ M + +G++P E+TF+G++ ACSH G+++EG YFR M++ Y
Sbjct: 296 VGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYK 355
Query: 392 INPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVS 451
I P +EH MVDL RAG + + +I + +W++ L +C +H + ++ ++
Sbjct: 356 IEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFAR 415
Query: 452 EMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
+LQ+ P+ Y+LLSNM S RW +
Sbjct: 416 IQILQLEPNHSGDYVLLSNMYASEQRWSD 444
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 165/350 (47%), Gaps = 51/350 (14%)
Query: 3 FSLFREMQAKGAC-PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
FSL+REM+ G P+ +T + K + +++LG+ +H+ ++R+G + + + NS+L
Sbjct: 105 FSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLH 164
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN-T 120
LY C A ++F+ E D+V WN +I + G E++L ++ + SK + T
Sbjct: 165 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
I+ L C + LGK++H +I +
Sbjct: 225 IVSLLSACA--------------------------------KIGALTLGKRVHVYMIKVG 252
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
L + ++ L+++Y +CGR ++A + + + NS V W S++ G NG
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDE-----MVDKNS---VSWTSLIVGLAVNGFG 304
Query: 241 EDCLKTFRSMVHELAIVDIR-TVTTVISACANAGLL----EFGRQMHAYIQKIGHRIDAY 295
++ ++ F+ M ++ T ++ AC++ G++ E+ R+M KI RI+ +
Sbjct: 305 KEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE-YKIEPRIEHF 363
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQA 344
++ + +++G + A+ + + +PNV +W +++ C +HG A
Sbjct: 364 --GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 210/398 (52%), Gaps = 16/398 (4%)
Query: 90 MIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMV--ENGTE 147
++ YL G + +F +P +D+VSWN++I G GY + E+L M+ E G
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 148 FSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVI 207
+EVTF E G+ +HG V+ + + + ++ + Y K G + +
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 208 LKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTF---RSMVHELAIVDIRTVTT 264
+D+ + +V WN+M+ ++ NG E L F R + HE D T
Sbjct: 192 FEDLSIK--------NLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE---PDQATFLA 240
Query: 265 VISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPN 324
V+ +C + G++ + +H I G + + ++L+ +YSK G L+D+ +F +I P+
Sbjct: 241 VLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPD 300
Query: 325 VFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFR 384
WT+M++ A HG G+ A FE M++ GI P+ VTF ++NACSH GL+EEG YF
Sbjct: 301 SMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFE 360
Query: 385 MMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNI 444
M Y I+P ++H + MVDL GR+G L + I E + + VW + L +CR++K+
Sbjct: 361 TMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDT 420
Query: 445 EMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
++G +E L ++ P D Y++LSN+ +++ W +A+
Sbjct: 421 QLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDAS 458
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 171/384 (44%), Gaps = 54/384 (14%)
Query: 13 GACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYA 72
G PN+ T S+ C + + G+ +H +++ GV +V +VN+ ++ Y K
Sbjct: 129 GFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGK------- 181
Query: 73 ERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYER 132
GD+ S +F +L K++VSWNT+I ++ G
Sbjct: 182 ------------------------TGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAE 217
Query: 133 RALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLV 192
+ L G E + TF V L + +HG ++ +G+ I ++L+
Sbjct: 218 KGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALL 277
Query: 193 EMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVH 252
++Y K GR + +S + ++ S + W +M++ Y +G D +K F MVH
Sbjct: 278 DLYSKLGRLEDSSTVFHEI--------TSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH 329
Query: 253 ELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRIDAYVGSSLIHMYSKSGS 309
D T T +++AC+++GL+E G+ + K I R+D Y S ++ + +SG
Sbjct: 330 YGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHY--SCMVDLLGRSGL 387
Query: 310 LDDAWVIFRQIN-EPNVFLWTSMISGCALHGK----GKQASSLFEGMLNQGIVPNEVTFL 364
L DA+ + +++ EP+ +W +++ C ++ K A LFE G ++
Sbjct: 388 LQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDG-----RNYV 442
Query: 365 GVINACSHVGLLEEGSTYFRMMKD 388
+ N S GL ++ S +MK
Sbjct: 443 MLSNIYSASGLWKDASRIRNLMKQ 466
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 20/195 (10%)
Query: 249 SMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSG 308
S VH L V+++I+A + +E R +H + K ++G L+ Y + G
Sbjct: 25 SFVHSLDA----NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLG 80
Query: 309 SLDDAWVIFRQINEPNVFLWTSMISGCALHGK-GKQASSLFEGMLNQ-GIVPNEVTFLGV 366
A +F ++ E ++ W S+ISG + G GK L M+++ G PNEVTFL +
Sbjct: 81 HDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSM 140
Query: 367 INACSHVGLLEEGS------TYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
I+AC + G EEG F ++++V +N + ++ YG+ G L +
Sbjct: 141 ISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVN-------AFINWYGKTGDLTSSCKLFE 193
Query: 421 ENGISHLTSVWKSFL 435
+ I +L S W + +
Sbjct: 194 DLSIKNLVS-WNTMI 207
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 207/413 (50%), Gaps = 12/413 (2%)
Query: 74 RLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP-SKDVVSWNTIIDGLIRCGYER 132
++ +L + ++ N MI +Y G V + +F L SKD++SWN++I G + +
Sbjct: 228 KVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKE 287
Query: 133 RALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLV 192
A EL M + E T+ GK LHG VI L ++L+
Sbjct: 288 SAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALI 347
Query: 193 EMYCK--CGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSM 250
MY + G + A L+L + S ++ WNS+++G+ G ED +K F +
Sbjct: 348 SMYIQFPTGTMEDA--------LSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYL 399
Query: 251 VHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSL 310
VD + ++ +C++ L+ G+Q+HA K G + +V SSLI MYSK G +
Sbjct: 400 RSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGII 459
Query: 311 DDAWVIFRQINEPN-VFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINA 369
+ A F+QI+ + W +MI G A HG G+ + LF M NQ + + VTF ++ A
Sbjct: 460 ESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTA 519
Query: 370 CSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTS 429
CSH GL++EG +M+ VY I P +EH + VDL GRAG + + K I ++
Sbjct: 520 CSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPM 579
Query: 430 VWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
V K+FL CR IEM V+ LL++ P D Y+ LS+M + +W+E A
Sbjct: 580 VLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKA 632
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 191/435 (43%), Gaps = 44/435 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF M+ G+ + Y+ S + K ++ K LG+ VH +++ G + +V + +S++D+Y
Sbjct: 88 LFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYA 147
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC+ E A F+ E + V+WN +I ++ D++ + + + K V+ +
Sbjct: 148 KCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDA---- 203
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
TF L KQ+H +V+ L L +
Sbjct: 204 --------------------------GTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHE 237
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
I ++++ Y CG A + + G S ++ WNSM++G+ + E
Sbjct: 238 ITICNAMISSYADCGSVSDAKRVFDGL-------GGSKDLISWNSMIAGFSKHELKESAF 290
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMY 304
+ F M DI T T ++SAC+ FG+ +H + K G ++LI MY
Sbjct: 291 ELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMY 350
Query: 305 SK--SGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
+ +G+++DA +F + ++ W S+I+G A G + A F + + I ++
Sbjct: 351 IQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYA 410
Query: 363 FLGVINACSHVGLLEEGSTYFRM-MKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
F ++ +CS + L+ G + K + N V +S++ +Y + G +IE+ F+
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFV--ISSLIVMYSKCG-IIESARKCFQ 467
Query: 422 NGIS-HLTSVWKSFL 435
S H T W + +
Sbjct: 468 QISSKHSTVAWNAMI 482
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 162/367 (44%), Gaps = 46/367 (12%)
Query: 40 VHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGD 99
H + ++ G +D+ + N ILD Y+K YA LF+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFD---------------------- 59
Query: 100 VEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXX 159
+P +D VSWNT+I G CG A L CM +G++ +F
Sbjct: 60 ---------EMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKG 110
Query: 160 XXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTG 219
+LG+Q+HG VI + ++ SSLV+MY KC R + A K++
Sbjct: 111 IASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEIS-----EP 165
Query: 220 NSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFG 278
NS V WN++++G+V + M + A+ +D T +++ +
Sbjct: 166 NS---VSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLL 222
Query: 279 RQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQI-NEPNVFLWTSMISGCAL 337
+Q+HA + K+G + + + +++I Y+ GS+ DA +F + ++ W SMI+G +
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 338 HGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVE 397
H + A LF M + + T+ G+++ACS EE + + + + I G+E
Sbjct: 283 HELKESAFELFIQMQRHWVETDIYTYTGLLSACSG----EEHQIFGKSLHGM-VIKKGLE 337
Query: 398 HCTSMVD 404
TS +
Sbjct: 338 QVTSATN 344
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 173/394 (43%), Gaps = 49/394 (12%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F LF +MQ + YT + + CS E++ GK +H +++ G++ N+++
Sbjct: 289 AFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALIS 348
Query: 62 LYLK--CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN 119
+Y++ E A LFE D+++WN +I + G E ++ F L S ++ +
Sbjct: 349 MYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDD 408
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
L+R + L +LG+Q+H
Sbjct: 409 YAFSALLRSCSDLATL-------------------------------QLGQQIHALATKS 437
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
+ F+ SSL+ MY KCG + A + + + V WN+M+ GY +G
Sbjct: 438 GFVSNEFVISSLIVMYSKCGIIESARKCFQQI-------SSKHSTVAWNAMILGYAQHGL 490
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ---KIGHRIDAYV 296
+ L F M ++ +D T T +++AC++ GL++ G ++ ++ KI R++ Y
Sbjct: 491 GQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYA 550
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG 355
+ + + ++G ++ A + + P+ + + + C G+ + A+ + +L
Sbjct: 551 AA--VDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLE-- 606
Query: 356 IVPNE-VTFLGVINACSHVGLLEEGSTYFRMMKD 388
I P + T++ + + S + EE ++ +MMK+
Sbjct: 607 IEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKE 640
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 137/301 (45%), Gaps = 29/301 (9%)
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
D ++++ +++ Y K G A+++ ++P V WN+M+SGY GK ED
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMP--------KRDSVSWNTMISGYTSCGKLEDA 85
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
F M + VD + + ++ A+ + G Q+H + K G+ + YVGSSL+ M
Sbjct: 86 WCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDM 145
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGM-LNQGIVPNEVT 362
Y+K ++DA+ F++I+EPN W ++I+G K A L M + + + T
Sbjct: 146 YAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGT 205
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYC--INPGVEH----CTSMVDLYGRAGCLIETK 416
F ++ L + + ++K V+ + G++H C +M+ Y G + + K
Sbjct: 206 FAPLLT-------LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 417 NFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQV----APSDPEAYILLSNMC 472
G S W S ++ H E+ + E+ +Q+ +D Y L + C
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKH---ELKESAFELFIQMQRHWVETDIYTYTGLLSAC 315
Query: 473 T 473
+
Sbjct: 316 S 316
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 232/479 (48%), Gaps = 40/479 (8%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F +M A G ++ +++S+ NL G +HA+++++G D+++ + N+++D
Sbjct: 370 ALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLID 429
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y KC Y M RA+L D KD++SW T+
Sbjct: 430 MYSKCNLTCY------------------MGRAFLRMHD-------------KDLISWTTV 458
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
I G + ALEL + + E E+ + + K++H ++ L
Sbjct: 459 IAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL 518
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
D I + LV++Y KC A+ + + + +V W SM+S NG
Sbjct: 519 L-DTVIQNELVDVYGKCRNMGYATRVFESI--------KGKDVVSWTSMISSSALNGNES 569
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
+ ++ FR MV D + ++SA A+ L GR++H Y+ + G ++ + +++
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
MY+ G L A +F +I + +TSMI+ +HG GK A LF+ M ++ + P+ +
Sbjct: 630 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 689
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
+FL ++ ACSH GLL+EG + ++M+ Y + P EH +VD+ GRA C++E F+
Sbjct: 690 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749
Query: 422 NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
VW + L++CR H E+G+ ++ LL++ P +P +L+SN+ RW++
Sbjct: 750 MKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWND 808
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 199/441 (45%), Gaps = 53/441 (12%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGV-DADVVLVNSIL 60
LFREM G PN YT+ S C +LGK +HA +L++ +++ + N+++
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI 327
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
+Y +C AER+ R + + DVV+WN+
Sbjct: 328 AMYTRCGKMPQAERIL-------------------------------RQMNNADVVTWNS 356
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+I G ++ + ALE M+ G + EV+ + G +LH VI
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Query: 181 LNGDNFINSSLVEMYCKCGRT---DKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
+ + + ++L++MY KC T +A + + D L + W ++++GY N
Sbjct: 417 WDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL-----------ISWTTVIAGYAQN 465
Query: 238 GKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVG 297
+ + L+ FR + + +D + +++ A + + +++H +I + G +D +
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG-LLDTVIQ 524
Query: 298 SSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV 357
+ L+ +Y K ++ A +F I +V WTSMIS AL+G +A LF M+ G+
Sbjct: 525 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584
Query: 358 PNEVTFLGVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
+ V L +++A + + L +G + +++ +C+ + ++VD+Y G L K
Sbjct: 585 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI--AVAVVDMYACCGDLQSAK 642
Query: 417 ---NFIFENGISHLTSVWKSF 434
+ I G+ TS+ ++
Sbjct: 643 AVFDRIERKGLLQYTSMINAY 663
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 200/448 (44%), Gaps = 52/448 (11%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
+L+ M+ +G + ++ K C+ ++++ G +H+ +++ G + +VN+++
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y K A RLF+ G EK D V WN+I
Sbjct: 226 MYAKNDDLSAARRLFD--------------------GFQEKG----------DAVLWNSI 255
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
+ G LEL M G + T +LGK++H V+ +
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315
Query: 182 NGDN-FINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
+ ++ ++L+ MY +CG+ +A IL+ + N+ +V WNS++ GYV N Y
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQM--------NNADVVTWNSLIKGYVQNLMY 367
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
++ L+ F M+ D ++T++I+A L G ++HAY+ K G + VG++L
Sbjct: 368 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 427
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
I MYSK F ++++ ++ WT++I+G A + +A LF + + + +E
Sbjct: 428 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDE 487
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYC--INPGVEHC---TSMVDLYGRAGCLIET 415
+ ++ A S + + ++K+++C + G+ +VD+YG+ +
Sbjct: 488 MILGSILRASSVLKSM-------LIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYA 540
Query: 416 KNFIFENGISHLTSVWKSFLSSCRLHKN 443
+FE+ W S +SS L+ N
Sbjct: 541 TR-VFESIKGKDVVSWTSMISSSALNGN 567
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 139/320 (43%), Gaps = 17/320 (5%)
Query: 94 YLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTF 153
Y G ++ + +F +P + +WNT+I + G AL L + M G +F
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 154 XXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPL 213
+ G +LH ++ L + FI ++LV MY K A +
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ- 244
Query: 214 NLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAG 273
G V WNS++S Y +GK + L+ FR M + T+ + ++AC
Sbjct: 245 ------EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFS 298
Query: 274 LLEFGRQMHAYIQKIG-HRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMI 332
+ G+++HA + K H + YV ++LI MY++ G + A I RQ+N +V W S+I
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 333 SGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCI 392
G + K+A F M+ G +EV+ +I A + L G M Y I
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG-----MELHAYVI 413
Query: 393 NPG----VEHCTSMVDLYGR 408
G ++ +++D+Y +
Sbjct: 414 KHGWDSNLQVGNTLIDMYSK 433
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 42/327 (12%)
Query: 166 VELGKQLHGRVI-TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGI 224
V G+QLH R+ T +F+ LV MY KCG D A + ++P RT
Sbjct: 96 VSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPD---RTA----- 147
Query: 225 VPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY 284
WN+M+ YV NG+ L + +M E + + + ++ ACA + G ++H+
Sbjct: 148 FAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSL 207
Query: 285 IQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEP-NVFLWTSMISGCALHGKGKQ 343
+ K+G+ ++ ++L+ MY+K+ L A +F E + LW S++S + GK +
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 344 ASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYC-INPGVEH---- 398
LF M G PN T + + AC +G +Y ++ K+++ + H
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTAC-------DGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 399 --CTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQ 456
C +++ +Y R G + + + + + + + + W S + +V ++ +
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVT-WNSLIKG-----------YVQNLMYK 368
Query: 457 VAPSDPEAYILLSNMCTSNHRWDEAAM 483
EA S+M + H+ DE +M
Sbjct: 369 ------EALEFFSDMIAAGHKSDEVSM 389
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 230/486 (47%), Gaps = 61/486 (12%)
Query: 20 TLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELT 79
TL SV + C KN+ +HA ++R D D +V ++ + + +YA +F
Sbjct: 31 TLISVLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 80 GEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLF 139
+V + MI ++ +G + ++ + V+ N +I +++ A +L
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLK------ACDLKV 141
Query: 140 CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG 199
C +++H +V+ L + ++E+Y K G
Sbjct: 142 C-----------------------------REIHAQVLKLGFGSSRSVGLKMMEIYGKSG 172
Query: 200 RTDKASVILKDVP-----------------------LNLLRTGNSGGIVPWNSMVSGYVW 236
A + ++P L L + V W +M+ G V
Sbjct: 173 ELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVR 232
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
N + L+ FR M E + T V+SAC++ G LE GR +H++++ + +V
Sbjct: 233 NKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFV 292
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
G++LI+MYS+ G +++A +FR + + +V + +MISG A+HG +A + F M+N+G
Sbjct: 293 GNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGF 352
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
PN+VT + ++NACSH GLL+ G F MK V+ + P +EH +VDL GR G L E
Sbjct: 353 RPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAY 412
Query: 417 NFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNH 476
FI I + + LS+C++H N+E+G+ +++ L + D Y+LLSN+ S+
Sbjct: 413 RFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSG 472
Query: 477 RWDEAA 482
+W E+
Sbjct: 473 KWKEST 478
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 191/393 (48%), Gaps = 27/393 (6%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
SL+ M P+ Y ++SV K C +L++ + +HA +L+ G + + ++++Y
Sbjct: 113 SLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIY 168
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
K A+++F+ + D V +MI Y G ++++L++F+++ KD V W +ID
Sbjct: 169 GKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMID 228
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
GL+R +ALEL M +E T +ELG+ +H V +
Sbjct: 229 GLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMEL 288
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
NF+ ++L+ MY +CG ++A + R ++ +N+M+SG +G +
Sbjct: 289 SNFVGNALINMYSRCGDINEAR--------RVFRVMRDKDVISYNTMISGLAMHGASVEA 340
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGH---RIDAYVGSSL 300
+ FR MV+ + T+ +++AC++ GLL+ G ++ ++++ + +I+ Y +
Sbjct: 341 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHY--GCI 398
Query: 301 IHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGK----GKQASSLFEGMLNQG 355
+ + + G L++A+ I EP+ + +++S C +HG K A LFE
Sbjct: 399 VDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESE---- 454
Query: 356 IVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
P+ T++ + N + G +E + M+D
Sbjct: 455 -NPDSGTYVLLSNLYASSGKWKESTEIRESMRD 486
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
+T+ +V+ +C N + +HA I + H DA+V LI + S S+D A+ +F
Sbjct: 30 KTLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSY 86
Query: 320 INEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACS-------H 372
++ PNV+L+T+MI G G+ SL+ M++ ++P+ V+ AC H
Sbjct: 87 VSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIH 146
Query: 373 VGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
+L+ G R + M+++YG++G L+ K E
Sbjct: 147 AQVLKLGFGSSRSVG------------LKMMEIYGKSGELVNAKKMFDE 183
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 196/374 (52%), Gaps = 8/374 (2%)
Query: 106 MFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXX 165
+F + D+V +N++ G R L ++E+G TF
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 166 VELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIV 225
+E G+QLH + L L+ + ++ +L+ MY +C D A + + +V
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV--------EPCVV 196
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI 285
+N+M++GY + + L FR M + + T+ +V+S+CA G L+ G+ +H Y
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQAS 345
+K V ++LI M++K GSLDDA IF ++ + W++MI A HGK +++
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 346 SLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDL 405
+FE M ++ + P+E+TFLG++NACSH G +EEG YF M + I P ++H SMVDL
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 406 YGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAY 465
RAG L + FI + IS +W+ L++C H N+++ + VSE + ++ S Y
Sbjct: 377 LSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDY 436
Query: 466 ILLSNMCTSNHRWD 479
++LSN+ N +W+
Sbjct: 437 VILSNLYARNKKWE 450
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 155/353 (43%), Gaps = 41/353 (11%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
VFSLF E+ G P+ YT S+ K C+ K L+ G+ +H ++ G+D +V + ++++
Sbjct: 113 VFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLIN 172
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y +C+ DV+ + +F + VV +N +
Sbjct: 173 MYTECE-------------------------------DVDSARCVFDRIVEPCVVCYNAM 201
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
I G R AL L M + +E+T ++LGK +H +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+N++L++M+ KCG D A I + +R ++ W++M+ Y +GK E
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEK-----MRYKDTQA---WSAMIVAYANHGKAE 313
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY-IQKIGHRIDAYVGSSL 300
+ F M E D T +++AC++ G +E GR+ + + K G S+
Sbjct: 314 KSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSM 373
Query: 301 IHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGML 352
+ + S++G+L+DA+ ++ P LW +++ C+ H A + E +
Sbjct: 374 VDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIF 426
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 54/241 (22%)
Query: 253 ELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKS---GS 309
++ V+ + +IS C + L Q+ AY K H D + LI+ ++S S
Sbjct: 23 KIDTVNTQNPILLISKCNSLREL---MQIQAYAIK-SHIEDVSFVAKLINFCTESPTESS 78
Query: 310 LDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINA 369
+ A +F ++EP++ ++ SM G + + SLF +L GI+P+ TF ++ A
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 370 CSHVGLLEEGSTYFRMMKDVYC------INPGVEHCTSMVDLYGR------AGCLIE--- 414
C+ LEEG + ++C ++ V C +++++Y A C+ +
Sbjct: 139 CAVAKALEEG-------RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV 191
Query: 415 ----------TKNFIFENGISHLTSVWK---------------SFLSSCRLHKNIEMGKW 449
+ N + S+++ S LSSC L ++++GKW
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 450 V 450
+
Sbjct: 252 I 252
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/515 (24%), Positives = 238/515 (46%), Gaps = 35/515 (6%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
L+R M+ +G + Y L + + C L + H +++ G+ ++ +VN +L L
Sbjct: 143 LELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTL 202
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMF----RNLPSKDVVSW 118
Y K A LF + ++WN+MI+ + D E ++ +F R D V+W
Sbjct: 203 YPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTW 262
Query: 119 NTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVIT 178
+++ +CG L+ M +G S + + +++HG VI
Sbjct: 263 TSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIK 322
Query: 179 LALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNS----------------- 221
++L+ +Y K G+ A + + + + + NS
Sbjct: 323 GGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSL 382
Query: 222 --------------GGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVIS 267
+V W S++ G G+ +D L+ FR M + + T+ ++S
Sbjct: 383 FSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILS 442
Query: 268 ACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFL 327
CA L GR++H ++ + + V ++L++MY+K G L + ++F I + ++
Sbjct: 443 ICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLIS 502
Query: 328 WTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK 387
W S+I G +HG ++A S+F+ M++ G P+ + + V++ACSH GL+E+G F M
Sbjct: 503 WNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMS 562
Query: 388 DVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMG 447
+ + P EH +VDL GR G L E + + V + L+SCR+HKN+++
Sbjct: 563 KRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIA 622
Query: 448 KWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
+ ++ L + P +Y+LLSN+ ++ RW+E+A
Sbjct: 623 EGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESA 657
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 165/347 (47%), Gaps = 18/347 (5%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V F M+ G + L+ F C+ + L + + VH ++++ G + + N+++
Sbjct: 278 VLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIH 337
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP--------SK 113
+Y K + AE LF + +WN +I +++ AG ++++L +F L
Sbjct: 338 VYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKA 397
Query: 114 DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
+VV+W ++I G G +LE M + + VT + LG+++H
Sbjct: 398 NVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIH 457
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSG 233
G VI +++ + + ++LV MY KCG + S++ + + ++ WNS++ G
Sbjct: 458 GHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI--------RDKDLISWNSIIKG 509
Query: 234 YVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQM-HAYIQKIGHRI 292
Y +G E L F M+ D + V+SAC++AGL+E GR++ ++ ++ G
Sbjct: 510 YGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEP 569
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
+ ++ + + G L +A I + + EP V + ++++ C +H
Sbjct: 570 QQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMH 616
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 127/307 (41%), Gaps = 35/307 (11%)
Query: 114 DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
D+ WN+I+ + G ALEL M + G L + H
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFH 181
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPL------NLLRTGNSGGI--- 224
+VI + L + + + L+ +Y K GR A + ++P+ N++ G S
Sbjct: 182 TQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCE 241
Query: 225 ------------------VPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVI 266
V W S++S + GK+ED LK F M V +
Sbjct: 242 SAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFF 301
Query: 267 SACANAGLLEFGRQMHAYIQKIGHRIDAYVGS--SLIHMYSKSGSLDDAWVIFRQINEPN 324
S CA L ++H Y+ K G + Y+ S +LIH+Y K G + DA +FRQI
Sbjct: 302 SVCAELEALSIAEKVHGYVIKGG--FEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKG 359
Query: 325 VFLWTSMISGCALHGKGKQASSLFEGM--LNQ--GIVPNEVTFLGVINACSHVGLLEEGS 380
+ W S+I+ GK +A SLF + +N + N VT+ VI C+ G ++
Sbjct: 360 IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSL 419
Query: 381 TYFRMMK 387
YFR M+
Sbjct: 420 EYFRQMQ 426
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 6/219 (2%)
Query: 170 KQLHGRVI-TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
+Q+H +V+ + + + ++L+ +Y + G A + + V L LL + WN
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLL-----SDLRLWN 127
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
S++ V +G YE+ L+ +R M D + ++ AC G R H + +I
Sbjct: 128 SILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQI 187
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
G + + +V + L+ +Y K+G + DA+ +F ++ N W MI G + + A +F
Sbjct: 188 GLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIF 247
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK 387
E M + P+EVT+ V++ S G E+ YF +M+
Sbjct: 248 EWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR 286
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 143/476 (30%), Positives = 223/476 (46%), Gaps = 43/476 (9%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADV-VLVNSILDLYL 64
F EM G PN TL SV C ++ GK VH + +R +D + L ++++LY
Sbjct: 291 FSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYA 350
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
+C G + + R + +++V+WN++I
Sbjct: 351 EC-------------------------------GKLSDCETVLRVVSDRNIVAWNSLISL 379
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
G +AL L MV + T V LGKQ+HG VI ++ D
Sbjct: 380 YAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-D 438
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
F+ +SL++MY K G D AS + + +V WNSM+ G+ NG + +
Sbjct: 439 EFVQNSLIDMYSKSGSVDSASTVFNQI--------KHRSVVTWNSMLCGFSQNGNSVEAI 490
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMY 304
F M H ++ T VI AC++ G LE G+ +H + G + D + ++LI MY
Sbjct: 491 SLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMY 549
Query: 305 SKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFL 364
+K G L+ A +FR ++ ++ W+SMI+ +HG+ A S F M+ G PNEV F+
Sbjct: 550 AKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFM 609
Query: 365 GVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGI 424
V++AC H G +EEG YF +MK + ++P EH +DL R+G L E I E
Sbjct: 610 NVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPF 668
Query: 425 SHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
SVW S ++ CR+H+ +++ K + L + D Y LLSN+ W+E
Sbjct: 669 LADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEE 724
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/478 (29%), Positives = 219/478 (45%), Gaps = 73/478 (15%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+F+ M G P+ T+ SV + C+ L++ + VH + R D D L NS+L +Y
Sbjct: 189 MFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYS 248
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC +ER+FE + + V+W MI +Y EK+L F
Sbjct: 249 KCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSE--------------- 293
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
M+++G E + VT + GK +HG + L+ +
Sbjct: 294 ----------------MIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPN 337
Query: 185 -NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
++ +LVE+Y +CG+ +L+ V + IV WNS++S Y G
Sbjct: 338 YESLSLALVELYAECGKLSDCETVLRVV--------SDRNIVAWNSLISLYAHRGMVIQA 389
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
L FR MV + D T+ + ISAC NAGL+ G+Q+H ++ + D +V +SLI M
Sbjct: 390 LGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDM 448
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
YSKSGS+D A +F QI +V W SM+ G + +G +A SLF+ M + + NEVTF
Sbjct: 449 YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTF 508
Query: 364 LGVINACSHVGLLEEGS-TYFRM----MKDVYCINPGVEHCTSMVDL------------- 405
L VI ACS +G LE+G + ++ +KD++ ++ DL
Sbjct: 509 LAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSR 568
Query: 406 --------------YGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKW 449
+GR G I T N + E+G V+ + LS+C ++E GK+
Sbjct: 569 SIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKY 626
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 203/444 (45%), Gaps = 52/444 (11%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEK-NLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
L+ + ++ +++ SV + C+ + +L +G VH +++ GVD D V+ S+L +Y
Sbjct: 87 LYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMY 146
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
+ AE++F+ +P +D+V+W+T++
Sbjct: 147 GQTGNLSDAEKVFD-------------------------------GMPVRDLVAWSTLVS 175
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
+ G +AL + CMV++G E VT + + + +HG++ +
Sbjct: 176 SCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDL 235
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
D + +SL+ MY KCG + I + + V W +M+S Y E
Sbjct: 236 DETLCNSLLTMYSKCGDLLSSERIFEKIA--------KKNAVSWTAMISSYNRGEFSEKA 287
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS---SL 300
L++F M+ ++ T+ +V+S+C GL+ G+ +H + + +D S +L
Sbjct: 288 LRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGF--AVRRELDPNYESLSLAL 345
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+ +Y++ G L D + R +++ N+ W S+IS A G QA LF M+ Q I P+
Sbjct: 346 VELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDA 405
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
T I+AC + GL+ G + + V++ S++D+Y ++G +++ + +F
Sbjct: 406 FTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGS-VDSASTVF 462
Query: 421 ENGISHLTSV-WKSFLSSCRLHKN 443
N I H + V W S L C +N
Sbjct: 463 -NQIKHRSVVTWNSML--CGFSQN 483
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 167/362 (46%), Gaps = 20/362 (5%)
Query: 60 LDLYLKCKAFEYAERLFE---LTGE--GDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKD 114
+ L+ C + +L +TG D + +I +Y G + S +F P D
Sbjct: 5 MPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPD 64
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXX-XXXXXXVELGKQLH 173
+ +I + C A++L +V T+ S+ F + +G ++H
Sbjct: 65 SFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVH 124
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSG 233
GR+I ++ D I +SL+ MY + G A + +P+ +V W+++VS
Sbjct: 125 GRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVR--------DLVAWSTLVSS 176
Query: 234 YVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRID 293
+ NG+ L+ F+ MV + D T+ +V+ CA G L R +H I + +D
Sbjct: 177 CLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLD 236
Query: 294 AYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLN 353
+ +SL+ MYSK G L + IF +I + N WT+MIS ++A F M+
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK 296
Query: 354 QGIVPNEVTFLGVINACSHVGLLEEGSTY--FRMMKDVYCINPGVEHCT-SMVDLYGRAG 410
GI PN VT V+++C +GL+ EG + F + ++ ++P E + ++V+LY G
Sbjct: 297 SGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE---LDPNYESLSLALVELYAECG 353
Query: 411 CL 412
L
Sbjct: 354 KL 355
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 227/480 (47%), Gaps = 42/480 (8%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F +F EMQ KG P+ +S + + GK H +++R+ D + NS+L +
Sbjct: 316 FDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSM 375
Query: 63 YLKCKAFEYAERLF-ELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
Y K + AE+LF ++ EG+ WN M++ Y
Sbjct: 376 YCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY--------------------------- 408
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
G ++C + +EL + G E + V LGK LH V+ +L
Sbjct: 409 --GKMKC--HVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSL 464
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ + +SL+++Y K G A + + N ++ WN+M++ YV + E
Sbjct: 465 DLTISVVNSLIDLYGKMGDLTVAWRMFCEADTN---------VITWNAMIASYVHCEQSE 515
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
+ F MV E T+ T++ AC N G LE G+ +H YI + H ++ + ++LI
Sbjct: 516 KAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALI 575
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
MY+K G L+ + +F N+ + W MISG +HG + A +LF+ M + P
Sbjct: 576 DMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGP 635
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
TFL +++AC+H GL+E+G F M Y + P ++H + +VDL R+G L E ++ +
Sbjct: 636 TFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMS 694
Query: 422 NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
S +W + LSSC H EMG ++E + P + YI+L+NM ++ +W+EA
Sbjct: 695 MPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEA 754
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 206/461 (44%), Gaps = 46/461 (9%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
PN TL F+ CS L+ G+ +H + ++NG+ + + +S+ Y K
Sbjct: 228 PNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSK---------- 277
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
+G+ ++ FR L +D+ SW +II L R G +
Sbjct: 278 ---------------------SGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESF 316
Query: 136 ELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMY 195
++ + M G V V GK HG VI + D+ + +SL+ MY
Sbjct: 317 DMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMY 376
Query: 196 CKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELA 255
CK A + R G WN+M+ GY + C++ FR + +
Sbjct: 377 CKFELLSVAEKLF-------CRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGI 429
Query: 256 IVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWV 315
+D + T+VIS+C++ G + G+ +H Y+ K + V +SLI +Y K G L AW
Sbjct: 430 EIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWR 489
Query: 316 IFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGL 375
+F + + NV W +MI+ + ++A +LF+ M+++ P+ +T + ++ AC + G
Sbjct: 490 MFCEA-DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGS 548
Query: 376 LEEGSTYFRMMKDV-YCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSF 434
LE G R + + + +N + +++D+Y + G L +++ +F+ G W
Sbjct: 549 LERGQMIHRYITETEHEMNLSLS--AALIDMYAKCGHLEKSRE-LFDAGNQKDAVCWNVM 605
Query: 435 LSSCRLHKNIEMGKWVSEMLLQ--VAPSDPEAYILLSNMCT 473
+S +H ++E + + + + V P+ P LLS CT
Sbjct: 606 ISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS-ACT 645
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 149/321 (46%), Gaps = 13/321 (4%)
Query: 90 MIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFS 149
+I +Y G S +F + +D+ WN+II G R+L F M+ +G
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPD 124
Query: 150 EVTFXXXXXXXXXXXXVELGKQLHGRVITLA-LNGDNFINSSLVEMYCKCGRTDKASVIL 208
T +G +HG V+ + + + +S V Y KCG A ++
Sbjct: 125 HFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVF 184
Query: 209 KDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVD---IRTVTTV 265
++P +V W +++SG+V NG+ E L M + VD RT+
Sbjct: 185 DEMP--------DRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECG 236
Query: 266 ISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNV 325
AC+N G L+ GR +H + K G +V SS+ YSKSG+ +A++ FR++ + ++
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 326 FLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRM 385
F WTS+I+ A G +++ +F M N+G+ P+ V +IN + L+ +G +
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 386 MKDVYCINPGVEHCTSMVDLY 406
+ +C + C S++ +Y
Sbjct: 357 VIR-HCFSLDSTVCNSLLSMY 376
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 223/480 (46%), Gaps = 57/480 (11%)
Query: 25 FKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDV 84
+ C+ + L K +HA +++ G+ L N+++++Y KC A +A
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHA------------ 57
Query: 85 VTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVEN 144
L +F +P +D ++W +++ L + + L + + +
Sbjct: 58 -------------------LQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSS 98
Query: 145 GT-EFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDK 203
+ F ++ G+Q+H I D + SSLV+MY KCG +
Sbjct: 99 SGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNS 158
Query: 204 ASVIL-----------------------KDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
A + K+ L L R + W +++SG+V +GK
Sbjct: 159 AKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKG 218
Query: 241 EDCLKTFRSMVHE-LAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
+ F M E + I+D +++++ ACAN GRQ+H + +G ++ ++
Sbjct: 219 LEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNA 278
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
LI MY+K + A IF ++ +V WTS+I G A HG+ ++A +L++ M++ G+ PN
Sbjct: 279 LIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPN 338
Query: 360 EVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFI 419
EVTF+G+I ACSHVG +E+G F+ M Y I P ++H T ++DL GR+G L E +N I
Sbjct: 339 EVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 398
Query: 420 FENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLL-QVAPSDPEAYILLSNMCTSNHRW 478
W + LS+C+ +MG +++ L+ DP YILLSN+ S W
Sbjct: 399 HTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLW 458
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 171/356 (48%), Gaps = 11/356 (3%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
P+ + S++ K C+ ++ G+ VH + + D V+ +S++D+Y KC A+ +
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
F+ + ++W M+ Y +G E++L++FR LP K++ SW +I G ++ G A
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 136 ELLFCMVENGTEFSEVTFXXXXXXXXXXXXVEL-GKQLHGRVITLALNGDNFINSSLVEM 194
+ M + + + G+Q+HG VI L + FI+++L++M
Sbjct: 223 SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDM 282
Query: 195 YCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHEL 254
Y KC + KD+ + +R + +V W S++ G +G+ E L + MV
Sbjct: 283 YAKCSDV----IAAKDI-FSRMRHRD---VVSWTSLIVGMAQHGQAEKALALYDDMVSHG 334
Query: 255 AIVDIRTVTTVISACANAGLLEFGRQMHAYIQK-IGHRIDAYVGSSLIHMYSKSGSLDDA 313
+ T +I AC++ G +E GR++ + K G R + L+ + +SG LD+A
Sbjct: 335 VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 394
Query: 314 WVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
+ + P+ W +++S C G+G+ + + +++ + + T++ + N
Sbjct: 395 ENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSN 450
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 244/490 (49%), Gaps = 64/490 (13%)
Query: 3 FSLFREMQAKGAC--PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
F+L+R+++ K C P+ +T +++ K CS + G +H+ + R G AD+ + ++
Sbjct: 62 FALYRDLR-KETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS-KDVVSWN 119
D+Y K A F+ V+W +I Y+ G+++ + +F +P KDVV +N
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYN 180
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
++DG ++ G A L F E+T H VIT
Sbjct: 181 AMMDGFVKSGDMTSARRL----------FDEMT--------------------HKTVITW 210
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
++++ YC D A + +P +V WN+M+ GY N +
Sbjct: 211 ---------TTMIHGYCNIKDIDAARKLFDAMP--------ERNLVSWNTMIGGYCQNKQ 253
Query: 240 YEDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
++ ++ F+ M ++ D T+ +V+ A ++ G L G H ++Q+ V +
Sbjct: 254 PQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCT 313
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
+++ MYSK G ++ A IF ++ E V W +MI G AL+G + A LF M+ + P
Sbjct: 314 AILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KP 372
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
+E+T L VI AC+H GL+EEG +F +M+++ +N +EH MVDL GRAG L E ++
Sbjct: 373 DEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDL 431
Query: 419 I----FE-NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCT 473
I FE NGI + SFLS+C +K+IE + + + +++ P + Y+LL N+
Sbjct: 432 ITNMPFEPNGI-----ILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYA 486
Query: 474 SNHRWDEAAM 483
++ RWD+ M
Sbjct: 487 ADKRWDDFGM 496
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 228 NSMVSGYVWNGKYEDCLKTFRSMVHELAIV-DIRTVTTVISACANAGLLEFGRQMHAYIQ 286
NSM+ Y+ +Y D +R + E D T TT+ +C+ + + G Q+H+ I
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 287 KIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
+ G D YV + ++ MY+K G + A F ++ + WT++ISG G+ AS
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK 165
Query: 347 LFEGM 351
LF+ M
Sbjct: 166 LFDQM 170
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 241/482 (50%), Gaps = 50/482 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+FR+M P T SV CS +G VH ++ G + ++ N+ + +Y
Sbjct: 278 VFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYS 334
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
+ F A ++FE +L KD+V+WNT+I
Sbjct: 335 SFEDFGAAHKVFE-------------------------------SLEEKDLVTWNTMISS 363
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+ + A+ + M G + E TF +E+ + +I L+
Sbjct: 364 YNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSK 420
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
I+++L+ Y K G+ +KA ++ + LR ++ WN+++SG+ NG + L
Sbjct: 421 IEISNALISAYSKNGQIEKADLLFE----RSLRKN----LISWNAIISGFYHNGFPFEGL 472
Query: 245 KTFRSMVH-ELAIV-DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
+ F ++ E+ I+ D T++T++S C + L G Q HAY+ + G + +G++LI+
Sbjct: 473 ERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALIN 532
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG-IVPNEV 361
MYS+ G++ ++ +F Q++E +V W S+IS + HG+G+ A + ++ M ++G ++P+
Sbjct: 533 MYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAA 592
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF--I 419
TF V++ACSH GL+EEG F M + + + V+H + +VDL GRAG L E ++ I
Sbjct: 593 TFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKI 652
Query: 420 FENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
E I VW + S+C H ++++GK V+++L++ DP Y+ LSN+ W
Sbjct: 653 SEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWK 712
Query: 480 EA 481
EA
Sbjct: 713 EA 714
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 190/423 (44%), Gaps = 19/423 (4%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
P+QY++S ++ G VH + +R+G+ + N++L LY + ++
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKK 114
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVS-WNTIIDGLIRCGYERRA 134
F+ E DV +W ++ A GD+E + ++F +P +D V+ WN +I G GY +
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETS 174
Query: 135 LELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEM 194
+EL M + G + F ++ GKQ+H VI + + ++L+ M
Sbjct: 175 VELFREMHKLGVRHDKFGF-ATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITM 233
Query: 195 YCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVH-E 253
Y C A ++ ++ + + V +N ++ G + K ++ L FR M+
Sbjct: 234 YFNCQVVVDACLVFEETDVAVRDQ------VTFNVVIDG-LAGFKRDESLLVFRKMLEAS 286
Query: 254 LAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDA 313
L D+ T +V+ +C+ A + G Q+H K G+ V ++ + MYS A
Sbjct: 287 LRPTDL-TFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAA 342
Query: 314 WVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHV 373
+F + E ++ W +MIS GK A S+++ M G+ P+E TF ++ +
Sbjct: 343 HKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL 402
Query: 374 GLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKS 433
+LE + + ++ +E +++ Y + G IE + +FE + W +
Sbjct: 403 DVLE----MVQACIIKFGLSSKIEISNALISAYSKNG-QIEKADLLFERSLRKNLISWNA 457
Query: 434 FLS 436
+S
Sbjct: 458 IIS 460
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 230/479 (48%), Gaps = 41/479 (8%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
F EM +G PN++TLSSV K C K L G VH +++ G++ + + N+++++Y
Sbjct: 99 FHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYAT 158
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL 125
C +E + +FR++ K+ V+W T+I G
Sbjct: 159 CSV------------------------------TMEAACLIFRDIKVKNDVTWTTLITGF 188
Query: 126 IRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDN 185
G L++ M+ E + V GKQ+H VI +
Sbjct: 189 THLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNL 248
Query: 186 FINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLK 245
+ +S++++YC+CG +A ++ ++ WN+++S + + L
Sbjct: 249 PVMNSILDLYCRCGYLSEAKHYFHEM--------EDKDLITWNTLISE-LERSDSSEALL 299
Query: 246 TFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYS 305
F+ + + + T T++++ACAN L G+Q+H I + G + + ++LI MY+
Sbjct: 300 MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYA 359
Query: 306 KSGSLDDAWVIFRQI-NEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFL 364
K G++ D+ +F +I + N+ WTSM+ G HG G +A LF+ M++ GI P+ + F+
Sbjct: 360 KCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFM 419
Query: 365 GVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGI 424
V++AC H GL+E+G YF +M+ Y INP + +VDL GRAG + E +
Sbjct: 420 AVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPF 479
Query: 425 SHLTSVWKSFLSSCRLHK-NIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
S W + L +C+ HK N + + + ++++ P Y++LS + + +W + A
Sbjct: 480 KPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFA 538
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 165/334 (49%), Gaps = 13/334 (3%)
Query: 90 MIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFS 149
+I +Y G VE++ +F +P +DVV+W +I G Y RA E MV+ GT +
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 150 EVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRT-DKASVIL 208
E T + G +HG V+ L + G +++++++ MY C T + A +I
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIF 170
Query: 209 KDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISA 268
+D+ + V W ++++G+ G LK ++ M+ E A V +T + A
Sbjct: 171 RDIKVK--------NDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRA 222
Query: 269 CANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLW 328
A+ + G+Q+HA + K G + + V +S++ +Y + G L +A F ++ + ++ W
Sbjct: 223 SASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITW 282
Query: 329 TSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGST-YFRMMK 387
++IS +A +F+ +QG VPN TF ++ AC+++ L G + R+ +
Sbjct: 283 NTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFR 341
Query: 388 DVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
+ N VE +++D+Y + G + +++ E
Sbjct: 342 RGF--NKNVELANALIDMYAKCGNIPDSQRVFGE 373
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 152/338 (44%), Gaps = 41/338 (12%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
++++M + A Y ++ + ++ ++ GK +HA +++ G +++ ++NSILDL
Sbjct: 198 LKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDL 257
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y +C A+ F + D++TWN +I + L D ++L MF+ S+
Sbjct: 258 YCRCGYLSEAKHYFHEMEDKDLITWNTLI-SELERSDSSEALLMFQRFESQ--------- 307
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G + Y TF + G+QLHGR+ N
Sbjct: 308 -GFVPNCY---------------------TFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ + ++L++MY KCG + + ++ + +V W SM+ GY +G +
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIV-------DRRNLVSWTSMMIGYGSHGYGAE 398
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ-KIGHRIDAYVGSSLI 301
++ F MV D V+SAC +AGL+E G + ++ + G D + + ++
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 302 HMYSKSGSLDDAW-VIFRQINEPNVFLWTSMISGCALH 338
+ ++G + +A+ ++ R +P+ W +++ C H
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 265 VISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPN 324
V S+ NAG+ + + H I + ++LI Y + G +++A +F ++ + +
Sbjct: 19 VRSSLRNAGVESSQNTEYPPYKPKKHHI---LATNLIVSYFEKGLVEEARSLFDEMPDRD 75
Query: 325 VFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGS---- 380
V WT+MI+G A +A F M+ QG PNE T V+ +C ++ +L G+
Sbjct: 76 VVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHG 135
Query: 381 --TYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSS- 437
M +Y N +M+++Y +E IF + W + ++
Sbjct: 136 VVVKLGMEGSLYVDN-------AMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGF 188
Query: 438 CRLHKNIEMGKWVSEMLLQVAPSDP 462
L I K +MLL+ A P
Sbjct: 189 THLGDGIGGLKMYKQMLLENAEVTP 213
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 229/489 (46%), Gaps = 49/489 (10%)
Query: 32 KNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKC-----KAFEYAERLFELTGEGDVVT 86
KNL+ +H ++ GVD D ++ L C A YA RL E D
Sbjct: 16 KNLRALTQIHGLFIKYGVDTDSYFTGKLI---LHCAISISDALPYARRLLLCFPEPDAFM 72
Query: 87 WNIMIRAYLGAGDVEKSLDMFRNLPSK-----DVVSWNTIIDGLIRCGYERRALELLFCM 141
+N ++R Y + + S+ +F + K D S+ +I + R ++
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 142 VENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR-----------VITLALNGDNFINSS 190
+++G E VE +++ VIT G++ +
Sbjct: 133 LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAR 192
Query: 191 ----------------LVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
++ Y K G + A I ++P V W++M+ G
Sbjct: 193 EIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHR--------DDVSWSTMIVGI 244
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDA 294
NG + + FR + + ++T V+SAC+ +G EFG+ +H +++K G+
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFL-WTSMISGCALHGKGKQASSLFEGMLN 353
V ++LI MYS+ G++ A ++F + E + WTSMI+G A+HG+G++A LF M
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 364
Query: 354 QGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLI 413
G+ P+ ++F+ +++ACSH GL+EEG YF MK VY I P +EH MVDLYGR+G L
Sbjct: 365 YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQ 424
Query: 414 ETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCT 473
+ +FI + I VW++ L +C H NIE+ + V + L ++ P++ +LLSN
Sbjct: 425 KAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYA 484
Query: 474 SNHRWDEAA 482
+ +W + A
Sbjct: 485 TAGKWKDVA 493
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 166/372 (44%), Gaps = 45/372 (12%)
Query: 4 SLFREMQAKG-ACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
++F EM KG P+ ++ + V K ++L+ G +H L++G+++ + + +++ +
Sbjct: 91 AVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGM 150
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y C E+A ++F+ + ++V WN +I A DV + ++F + ++ SWN ++
Sbjct: 151 YGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVML 210
Query: 123 DGLIRCGYERRALELLFCMVEN-------------------------------GTEFSEV 151
G I+ G A + M G +EV
Sbjct: 211 AGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEV 270
Query: 152 TFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDV 211
+ E GK LHG V + +N++L++MY +CG A ++ + +
Sbjct: 271 SLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGM 330
Query: 212 PLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACAN 271
IV W SM++G +G+ E+ ++ F M D + +++ AC++
Sbjct: 331 Q-------EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSH 383
Query: 272 AGLLEFGRQMHAYIQKIGH---RIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFL 327
AGL+E G + ++++ H I+ Y ++ +Y +SG L A+ Q+ P +
Sbjct: 384 AGLIEEGEDYFSEMKRVYHIEPEIEHY--GCMVDLYGRSGKLQKAYDFICQMPIPPTAIV 441
Query: 328 WTSMISGCALHG 339
W +++ C+ HG
Sbjct: 442 WRTLLGACSSHG 453
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F FRE+Q G PN+ +L+ V CS + + GK +H ++ + G V + N+++D+
Sbjct: 254 FLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDM 313
Query: 63 YLKCKAFEYAERLFELTGEGD-VVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVV 116
Y +C A +FE E +V+W MI G E+++ +F + + V
Sbjct: 314 YSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT 368
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 234/506 (46%), Gaps = 74/506 (14%)
Query: 9 MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKA 68
M + G+ L + CS + L K +HA +++ G+ +D V + +L C A
Sbjct: 16 MPSSGSLSGNTYLRLIDTQCSTMREL---KQIHASLIKTGLISDTVTASRVLAF---CCA 69
Query: 69 FEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRC 128
+ + M AYL +F + K+ WNTII G R
Sbjct: 70 -----------------SPSDMNYAYL----------VFTRINHKNPFVWNTIIRGFSRS 102
Query: 129 GYERRALELLFCMV--ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNF 186
+ A+ + M+ + +T+ G+QLHG VI L D+F
Sbjct: 103 SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSF 162
Query: 187 INSSLVEMY-------------------------------CKCGRTDKASVILKDVPLNL 215
I ++++ MY KCG D+A + ++P
Sbjct: 163 IRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQ-- 220
Query: 216 LRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLL 275
R G V WNSM+SG+V NG+++D L FR M + D T+ ++++ACA G
Sbjct: 221 -RNG-----VSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 276 EFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGC 335
E GR +H YI + +++ V ++LI MY K G +++ +F + + W SMI G
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 336 ALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPG 395
A +G ++A LF + G+ P+ V+F+GV+ AC+H G + +FR+MK+ Y I P
Sbjct: 335 ANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPS 394
Query: 396 VEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLL 455
++H T MV++ G AG L E + I + T +W S LS+CR N+EM K ++ L
Sbjct: 395 IKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLK 454
Query: 456 QVAPSDPEAYILLSNMCTSNHRWDEA 481
++ P + Y+LLSN S ++EA
Sbjct: 455 KLDPDETCGYVLLSNAYASYGLFEEA 480
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
+FREMQ K P+ +T+ S+ C+ + G+ +H +++RN + + ++V +++D
Sbjct: 242 ALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALID 301
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP----SKDVVS 117
+Y KC E +FE + + WN MI G E+++D+F L D VS
Sbjct: 302 MYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVS 361
Query: 118 WNTIIDGLIRCGYERRALELLFCMVEN 144
+ ++ G RA E M E
Sbjct: 362 FIGVLTACAHSGEVHRADEFFRLMKEK 388
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/475 (29%), Positives = 225/475 (47%), Gaps = 55/475 (11%)
Query: 52 DVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP 111
D V N +L YL+ + A R+F+ +VV+ + M+ Y G + + +F +
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 112 SKDVVSWNTIIDGLIRCGYERRALELLFCMVENG-TEFSEVTFXXXXXXXXXXXXVELGK 170
++V++W +IDG + G+ L M + G + + T G
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 171 QLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVIL-----KD-VPLNLLRTG----- 219
Q+HG V + L D F+ +SL+ MY K G +A + KD V N L TG
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRK 355
Query: 220 --------------------------NSG-----------GIVP------WNSMVSGYVW 236
SG G++P W +M+S +V
Sbjct: 356 QISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVS 415
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
NG YE+ L F M+ + + T ++V+SA A+ L G Q+H + K+ D V
Sbjct: 416 NGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSV 475
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
+SL+ MY K G+ +DA+ IF I+EPN+ + +MISG + +G GK+A LF + + G
Sbjct: 476 QNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGK 535
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
PN VTFL +++AC HVG ++ G YF+ MK Y I PG +H MVDL GR+G L +
Sbjct: 536 EPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDAS 595
Query: 417 NFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNM 471
N I + VW S LS+ + H +++ + ++ L+++ P Y++LS +
Sbjct: 596 NLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQL 650
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 162/372 (43%), Gaps = 46/372 (12%)
Query: 3 FSLFREMQAKGACP-NQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F LF M+ +G N TL+ +FK C + G +H + R ++ D+ L NS++
Sbjct: 259 FGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMS 318
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y K A+ +F + D V+WN +I + + ++ ++F +P KD+VSW +
Sbjct: 319 MYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDM 378
Query: 122 IDG-------------------------------LIRCGYERRALELLFCMVENGTEFSE 150
I G + GY AL M++ +
Sbjct: 379 IKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNS 438
Query: 151 VTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKD 210
TF + G Q+HGRV+ + + D + +SLV MYCKCG T+ A I
Sbjct: 439 YTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSC 498
Query: 211 VPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACA 270
+ + IV +N+M+SGY +NG + LK F + + T ++SAC
Sbjct: 499 I--------SEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACV 550
Query: 271 NAGLLEFGRQMHAYIQK---IGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVF 326
+ G ++ G + ++ I D Y + ++ + +SG LDDA + + +P+
Sbjct: 551 HVGYVDLGWKYFKSMKSSYNIEPGPDHY--ACMVDLLGRSGLLDDASNLISTMPCKPHSG 608
Query: 327 LWTSMISGCALH 338
+W S++S H
Sbjct: 609 VWGSLLSASKTH 620
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 140/359 (38%), Gaps = 39/359 (10%)
Query: 57 NSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVV 116
NS + + + + AE +F +V+W MI AY G + K+ +F +P +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVE---------------NGTEFSEVTFXXXXXXXX 161
S+N +I +I+ + LFC + F E F
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVK 173
Query: 162 XXXXVELGKQLHG-----------RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKD 210
V L G RV + SS+V YCK GR A
Sbjct: 174 FRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDAR----- 228
Query: 211 VPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI-VDIRTVTTVISAC 269
+L ++ W +M+ GY G +ED F M E + V+ T+ + AC
Sbjct: 229 ---SLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
Query: 270 ANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWT 329
+ G Q+H + ++ D ++G+SL+ MYSK G + +A +F + + W
Sbjct: 286 RDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWN 345
Query: 330 SMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
S+I+G + +A LFE M + + V++ +I S G + + F MM +
Sbjct: 346 SLITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMMPE 400
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 223/481 (46%), Gaps = 43/481 (8%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF+EM + NQ+T SV K C L+ G +H + + ++++ +++L LY
Sbjct: 100 LFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYA 159
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
+C G +E++ F ++ +D+VSWN +IDG
Sbjct: 160 RC-------------------------------GKMEEARLQFDSMKERDLVSWNAMIDG 188
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+ L M+ G + TF +E+ +LHG I L
Sbjct: 189 YTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRS 248
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW-NGKYEDC 243
+ + SLV Y KCG A L ++ ++++G+ N D
Sbjct: 249 SALIRSLVNAYVKCGSLANA--------WKLHEGTKKRDLLSCTALITGFSQQNNCTSDA 300
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGH-RIDAYVGSSLIH 302
F+ M+ +D V++++ C + GRQ+H + K R D +G+SLI
Sbjct: 301 FDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLID 360
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MY+KSG ++DA + F ++ E +V WTS+I+G HG ++A L+ M ++ I PN+VT
Sbjct: 361 MYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVT 420
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF-- 420
FL +++ACSH G E G + M + + I EH + ++D+ R+G L E I
Sbjct: 421 FLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSK 480
Query: 421 ENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
E +S +S W +FL +CR H N+++ K + LL + P P YI L+++ +N WD
Sbjct: 481 EGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDN 540
Query: 481 A 481
A
Sbjct: 541 A 541
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 154/359 (42%), Gaps = 10/359 (2%)
Query: 88 NIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTE 147
+++I YL GDV+ + +F + +DVVSW +I RCGY AL L M +
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVK 110
Query: 148 FSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVI 207
++ T+ ++ G Q+HG V G+ + S+L+ +Y +CG+ ++A +
Sbjct: 111 ANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQ 170
Query: 208 LKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVIS 267
+ +V WN+M+ GY N + F+ M+ E D T +++
Sbjct: 171 FDSMK--------ERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLR 222
Query: 268 ACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFL 327
A LE ++H K+G + + SL++ Y K GSL +AW + + ++
Sbjct: 223 ASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLS 282
Query: 328 WTSMISGCALHGK-GKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM 386
T++I+G + A +F+ M+ +EV ++ C+ + + G
Sbjct: 283 CTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFA 342
Query: 387 KDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIE 445
I V S++D+Y ++G IE FE W S ++ H N E
Sbjct: 343 LKSSQIRFDVALGNSLIDMYAKSG-EIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFE 400
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 172 LHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMV 231
+HG IT + + L+++Y K G A + + + +V W +M+
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRI--------SKRDVVSWTAMI 85
Query: 232 SGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR 291
S + G + D L F+ M E + T +V+ +C + G L+ G Q+H ++K
Sbjct: 86 SRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCA 145
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGM 351
+ V S+L+ +Y++ G +++A + F + E ++ W +MI G + + SLF+ M
Sbjct: 146 GNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLM 205
Query: 352 LNQGIVPNEVTFLGVINACSHVGLLE 377
L +G P+ TF ++ A V LE
Sbjct: 206 LTEGKKPDCFTFGSLLRASIVVKCLE 231
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNG-VDADVVLVNSIL 60
F +F++M ++ +SS+ K C+ ++ +G+ +H + L++ + DV L NS++
Sbjct: 300 AFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLI 359
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV 115
D+Y K E A FE E DV +W +I Y G+ EK++D++ + + +
Sbjct: 360 DMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERI 414
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 238/482 (49%), Gaps = 49/482 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+F M+ ++ + +SV K C+ K L+ + +H +++ G D + +++ Y
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC A A RLF+ G +G +VVSW +I G
Sbjct: 342 KCTAMLDALRLFKEIG-------------CVG-----------------NVVSWTAMISG 371
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
++ + A++L M G +E T+ E+ H +V+
Sbjct: 372 FLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERS 427
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ + ++L++ Y K G+ ++A+ + + + IV W++M++GY G+ E +
Sbjct: 428 STVGTALLDAYVKLGKVEEAAKVFSGI--------DDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 245 KTFRSMVHELAIVDIRTVTTVISACA--NAGLLEFGRQMHAYIQKIGHRIDAY--VGSSL 300
K F + + T +++++ CA NA + + G+Q H + I R+D+ V S+L
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ-GKQFHGFA--IKSRLDSSLCVSSAL 536
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+ MY+K G+++ A +F++ E ++ W SMISG A HG+ +A +F+ M + + +
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
VTF+GV AC+H GL+EEG YF +M I P EH + MVDLY RAG L + I
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 421 ENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
+++W++ L++CR+HK E+G+ +E ++ + P D AY+LLSNM + W E
Sbjct: 657 NMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQE 716
Query: 481 AA 482
A
Sbjct: 717 RA 718
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 192/440 (43%), Gaps = 43/440 (9%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V +LF MQ +G PN +T ++ + E G VH +++NG+D + + NS+++
Sbjct: 178 VLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLIN 237
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
LYLKC G+V K+ +F K VV+WN++
Sbjct: 238 LYLKC-------------------------------GNVRKARILFDKTEVKSVVTWNSM 266
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
I G G + AL + + M N SE +F + +QLH V+
Sbjct: 267 ISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGF 326
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
D I ++L+ Y KC A + K++ G G +V W +M+SG++ N E
Sbjct: 327 LFDQNIRTALMVAYSKCTAMLDALRLFKEI-------GCVGNVVSWTAMISGFLQNDGKE 379
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
+ + F M + + T + +++A E +HA + K + + VG++L+
Sbjct: 380 EAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALL 435
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
Y K G +++A +F I++ ++ W++M++G A G+ + A +F + GI PNE
Sbjct: 436 DAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEF 495
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
TF ++N C+ F ++ + ++++ +Y + G IE+ +F+
Sbjct: 496 TFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGN-IESAEEVFK 554
Query: 422 NGISHLTSVWKSFLSSCRLH 441
W S +S H
Sbjct: 555 RQREKDLVSWNSMISGYAQH 574
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 173/395 (43%), Gaps = 45/395 (11%)
Query: 21 LSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTG 80
SSV K + + G+ +H ++ G DV + S++D Y+K F+ ++F+
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD--- 152
Query: 81 EGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFC 140
+ ++VV+W T+I G R L L
Sbjct: 153 ----------------------------EMKERNVVTWTTLISGYARNSMNDEVLTLFMR 184
Query: 141 MVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGR 200
M GT+ + TF G Q+H V+ L+ +++SL+ +Y KCG
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN 244
Query: 201 TDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIR 260
KA ++ + +V WNSM+SGY NG + L F SM +
Sbjct: 245 VRKARILFDKTEVK--------SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSES 296
Query: 261 TVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQI 320
+ +VI CAN L F Q+H + K G D + ++L+ YSK ++ DA +F++I
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 321 N-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
NV WT+MISG + ++A LF M +G+ PNE T+ ++ A + ++
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA---LPVISPS 413
Query: 380 STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIE 414
+ +++K Y + V T+++D Y + G + E
Sbjct: 414 EVHAQVVKTNYERSSTV--GTALLDAYVKLGKVEE 446
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 24/322 (7%)
Query: 105 DMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXX 164
++F P +D S+ +++ G R G + A L + G E F
Sbjct: 48 NLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLC 107
Query: 165 XVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGI 224
G+QLH + I D + +SLV+ Y K + ++ +
Sbjct: 108 DELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM--------KERNV 159
Query: 225 VPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY 284
V W +++SGY N ++ L F M +E + T + A G+ G Q+H
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219
Query: 285 IQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQA 344
+ K G V +SLI++Y K G++ A ++F + +V W SMISG A +G +A
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279
Query: 345 SSLFEGMLNQGIVPNEVTFLGVINACS-----------HVGLLEEGSTYFRMMKDVYCIN 393
+F M + +E +F VI C+ H +++ G + + ++ +
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV- 338
Query: 394 PGVEHCTSMVD---LYGRAGCL 412
CT+M+D L+ GC+
Sbjct: 339 -AYSKCTAMLDALRLFKEIGCV 359
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 6/210 (2%)
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQK 287
S++ G+ +G+ ++ + F + +H L + +D ++V+ A FGRQ+H K
Sbjct: 63 SLLFGFSRDGRTQEAKRLFLN-IHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIK 121
Query: 288 IGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSL 347
G D VG+SL+ Y K + D +F ++ E NV WT++ISG A + + +L
Sbjct: 122 FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTL 181
Query: 348 FEGMLNQGIVPNEVTFLGVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLY 406
F M N+G PN TF + + G+ G + ++K+ ++ + S+++LY
Sbjct: 182 FMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN--GLDKTIPVSNSLINLY 239
Query: 407 GRAGCLIETKNFIFENGISHLTSVWKSFLS 436
+ G + + + +F+ W S +S
Sbjct: 240 LKCGNVRKAR-ILFDKTEVKSVVTWNSMIS 268
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 223/479 (46%), Gaps = 69/479 (14%)
Query: 16 PNQYTLSSVFK----CCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEY 71
PN + +++FK C ++L+L + MLR+ V +S++ KA +
Sbjct: 834 PNVFVYNALFKGFVTCSHPIRSLEL----YVRMLRDSVSPSSYTYSSLV------KASSF 883
Query: 72 AERLFELT-------GEG-DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
A R E G G V +I Y G + ++ +F +P +D ++W T++
Sbjct: 884 ASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVS 943
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
RR L++ L Q+ +
Sbjct: 944 AY------RRVLDM-------------------------DSANSLANQMSEK-------- 964
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ ++ L+ Y G ++A + +P+ I+ W +M+ GY N +Y +
Sbjct: 965 NEATSNCLINGYMGLGNLEQAESLFNQMPVK--------DIISWTTMIKGYSQNKRYREA 1016
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
+ F M+ E I D T++TVISACA+ G+LE G+++H Y + G +D Y+GS+L+ M
Sbjct: 1017 IAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDM 1076
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
YSK GSL+ A ++F + + N+F W S+I G A HG ++A +F M + + PN VTF
Sbjct: 1077 YSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTF 1136
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
+ V AC+H GL++EG +R M D Y I VEH MV L+ +AG + E I
Sbjct: 1137 VSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNME 1196
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
+W + L CR+HKN+ + + L+ + P + Y LL +M +RW + A
Sbjct: 1197 FEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVA 1255
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 36/201 (17%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
++F +M +G P++ T+S+V C+ L++GK VH + L+NG DV + ++++D
Sbjct: 1016 AIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVD 1075
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y KC G +E++L +F NLP K++ WN+I
Sbjct: 1076 MYSKC-------------------------------GSLERALLVFFNLPKKNLFCWNSI 1104
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI---T 178
I+GL G+ + AL++ M + + VTF V+ G++++ +I +
Sbjct: 1105 IEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYS 1164
Query: 179 LALNGDNFINSSLVEMYCKCG 199
+ N +++ +V ++ K G
Sbjct: 1165 IVSNVEHY--GGMVHLFSKAG 1183
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 134/335 (40%), Gaps = 69/335 (20%)
Query: 210 DVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISAC 269
D+ ++ + + +N++ G+V L+ + M+ + T ++++ A
Sbjct: 822 DLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKAS 881
Query: 270 ANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWT 329
+ A FG + A+I K G + ++LI YS +G + +A +F ++ E + WT
Sbjct: 882 SFAS--RFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWT 939
Query: 330 SMISG--------------------------CALH-----GKGKQASSLFE--------- 349
+M+S C ++ G +QA SLF
Sbjct: 940 TMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIIS 999
Query: 350 ----------------------GMLNQGIVPNEVTFLGVINACSHVGLLEEGS-TYFRMM 386
M+ +GI+P+EVT VI+AC+H+G+LE G + +
Sbjct: 1000 WTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTL 1059
Query: 387 KDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHK-NIE 445
++ + ++ V +++VD+Y + G L E +F N W S + H E
Sbjct: 1060 QNGFVLD--VYIGSALVDMYSKCGSL-ERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQE 1116
Query: 446 MGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
K ++M ++ + ++ + CT DE
Sbjct: 1117 ALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDE 1151
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/572 (25%), Positives = 244/572 (42%), Gaps = 102/572 (17%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V LFR M G P+ + + + C+ +++ GK +H+ +++ G+ + + + NSIL
Sbjct: 165 VAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILA 224
Query: 62 LYLKCKAFEYAERLFELTGEGDV-----------------------------------VT 86
+Y KC ++A + F E DV VT
Sbjct: 225 VYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT 284
Query: 87 WNIMIRAYLGAGDVEKSLDMFRNLPS----KDVVSWNTIIDGLIRCGYERRALELLFCMV 142
WNI+I Y G + ++D+ + + + DV +W +I GLI G +AL++ M
Sbjct: 285 WNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF 344
Query: 143 ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCK----- 197
G + VT + G ++H + + D + +SLV+MY K
Sbjct: 345 LAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLE 404
Query: 198 -----------------------------CGRTDKASVILKDVPLN------------LL 216
CG+ + ++D L +
Sbjct: 405 DARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYI 464
Query: 217 RTGNSG-----------------GIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDI 259
+ G+ G WN +++GY+ NGK ++ L+ FR M + +
Sbjct: 465 KNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNS 524
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
T+ +++ ACAN + R++H + + V ++L Y+KSG ++ + IF
Sbjct: 525 VTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLG 584
Query: 320 INEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
+ ++ W S+I G LHG A +LF M QGI PN T +I A +G ++EG
Sbjct: 585 METKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEG 644
Query: 380 STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCR 439
F + + Y I P +EHC++MV LYGRA L E FI E I T +W+SFL+ CR
Sbjct: 645 KKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCR 704
Query: 440 LHKNIEMGKWVSEMLLQVAPSDPEAYILLSNM 471
+H +I+M +E L + P + ++S +
Sbjct: 705 IHGDIDMAIHAAENLFSLEPENTATESIVSQI 736
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 154/376 (40%), Gaps = 63/376 (16%)
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
F L E DV ++ Y G + + +F ++ +++ +W+ +I R R
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA 166
Query: 136 ELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMY 195
+L M+++G + F VE GK +H VI L ++ +++S++ +Y
Sbjct: 167 KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVY 226
Query: 196 CKCGRTDKASVILK---------------------------DVPLNLLRTGNSGGIVPWN 228
KCG D A+ + ++ + + G S G+V WN
Sbjct: 227 AKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 229 -----------------------------------SMVSGYVWNGKYEDCLKTFRSMVHE 253
+M+SG + NG L FR M
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 254 LAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDA 313
+ + T+ + +SAC+ ++ G ++H+ K+G D VG+SL+ MYSK G L+DA
Sbjct: 347 GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA 406
Query: 314 WVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHV 373
+F + +V+ W SMI+G G +A LF M + + PN +T+ +I+
Sbjct: 407 RKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKN 466
Query: 374 GLLEEGSTYF-RMMKD 388
G E F RM KD
Sbjct: 467 GDEGEAMDLFQRMEKD 482
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 10/282 (3%)
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
D L R G A + L + + G++ T+ + LG+ LH R L
Sbjct: 53 FDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHAR-FGLFT 111
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
D F+ + L+ MY KCG A + + +R N + W++M+ Y ++
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVF-----DSMRERN---LFTWSAMIGAYSRENRWR 163
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
+ K FR M+ + + D ++ CAN G +E G+ +H+ + K+G V +S++
Sbjct: 164 EVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSIL 223
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
+Y+K G LD A FR++ E +V W S++ +GK ++A L + M +GI P V
Sbjct: 224 AVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMV 403
T+ +I + +G + + M + + I V T+M+
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMI 324
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 225/484 (46%), Gaps = 46/484 (9%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V L+ +M A+ P+ T + K C + L+ G+ V + G DV + +S+L+
Sbjct: 100 VLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLN 159
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
LY+KC + AE L F + +DV+ W T+
Sbjct: 160 LYMKCGKMDEAEVL-------------------------------FGKMAKRDVICWTTM 188
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
+ G + G +A+E M G V ++G+ +HG + L
Sbjct: 189 VTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGL 248
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ + +SLV+MY K G + AS + + + +T V W S++SG+ NG
Sbjct: 249 PMNVVVETSLVDMYAKVGFIEVASRVFSRM---MFKTA-----VSWGSLISGFAQNGLAN 300
Query: 242 DCLKTFRSMVHELAI---VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
K F ++V ++ D+ T+ V+ AC+ G L+ GR +H YI K H +D +
Sbjct: 301 ---KAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILK-RHVLDRVTAT 356
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
+L+ MYSK G+L + IF + ++ W +MIS +HG G++ SLF M I P
Sbjct: 357 ALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEP 416
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
+ TF +++A SH GL+E+G +F +M + Y I P +H ++DL RAG + E +
Sbjct: 417 DHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDM 476
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRW 478
I + + +W + LS C H+N+ +G + +LQ+ P L+SN + ++W
Sbjct: 477 INSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKW 536
Query: 479 DEAA 482
E A
Sbjct: 537 KEVA 540
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 169/366 (46%), Gaps = 14/366 (3%)
Query: 98 GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXX 157
G++ + +F LP + V +N++I R L L M+ + TF
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 158 XXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLR 217
+E G+ + + + D F+ SS++ +Y KCG+ D+A V+ +
Sbjct: 124 KACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMA----- 178
Query: 218 TGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEF 277
++ W +MV+G+ GK ++ +R M +E D + ++ A + G +
Sbjct: 179 ---KRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 278 GRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCAL 337
GR +H Y+ + G ++ V +SL+ MY+K G ++ A +F ++ W S+ISG A
Sbjct: 236 GRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQ 295
Query: 338 HGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVE 397
+G +A M + G P+ VT +GV+ ACS VG L+ G + + ++
Sbjct: 296 NGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVT- 354
Query: 398 HCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQV 457
T+++D+Y + G L ++ IFE+ W + +S +H N G+ V + L++
Sbjct: 355 -ATALMDMYSKCGALSSSRE-IFEHVGRKDLVCWNTMISCYGIHGN---GQEVVSLFLKM 409
Query: 458 APSDPE 463
S+ E
Sbjct: 410 TESNIE 415
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 131/269 (48%), Gaps = 15/269 (5%)
Query: 171 QLHGRVITLA--LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
Q+H VI+ LNG + I+ L+ + G A + ++P G+ +N
Sbjct: 35 QIHAFVISTGNLLNGSS-ISRDLIASCGRIGEISYARKVFDELP--------QRGVSVYN 85
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
SM+ Y ++ L+ + M+ E D T T I AC + +LE G +
Sbjct: 86 SMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDF 145
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
G++ D +V SS++++Y K G +D+A V+F ++ + +V WT+M++G A GK +A +
Sbjct: 146 GYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFY 205
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLYG 407
M N+G + V LG++ A +G + G S + + + +N VE TS+VD+Y
Sbjct: 206 REMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVE--TSLVDMYA 263
Query: 408 RAGCLIETKNFIFENGISHLTSVWKSFLS 436
+ G IE + +F + W S +S
Sbjct: 264 KVG-FIEVASRVFSRMMFKTAVSWGSLIS 291
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 142/482 (29%), Positives = 241/482 (50%), Gaps = 39/482 (8%)
Query: 32 KNLQLGKGVHAWMLRNGVDADVVLVNS-ILDLYLKCK-AFEYAERLFELTGEGDVVTWNI 89
KN++ K +HA M+ NG+ +++ +V I L A +YA +LF+ + DV N
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNH 82
Query: 90 MIRAYLGAGDVEKSLDMFRNLP----SKDVVSWNTIIDGLIRCGYERRALELLFCMVENG 145
++R + EK++ ++ + S D ++ ++ + + +V +G
Sbjct: 83 VLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHG 142
Query: 146 TEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKAS 205
+E + +LG + + + SS+ Y K G+ D+A
Sbjct: 143 FVLNE--YVKNALILFHANCGDLG--IASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 206 VILKDVPL------NLLRTG-----------------NSGGIVPWNSMVSGYVWNGKYED 242
+ ++P N++ TG +V WN+M+SGYV G ++
Sbjct: 199 RLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKE 258
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDA-YVGS--- 298
L F+ M D+ T+ +++SACA G LE G+++H YI + + YVG+
Sbjct: 259 ALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIW 318
Query: 299 -SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV 357
+LI MY+K GS+D A +FR + + ++ W ++I G ALH + + +FE M +
Sbjct: 319 NALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVW 377
Query: 358 PNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKN 417
PNEVTF+GVI ACSH G ++EG YF +M+D+Y I P ++H MVD+ GRAG L E
Sbjct: 378 PNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFM 437
Query: 418 FIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHR 477
F+ I VW++ L +C+++ N+E+GK+ +E LL + + Y+LLSN+ S +
Sbjct: 438 FVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQ 497
Query: 478 WD 479
WD
Sbjct: 498 WD 499
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 169/376 (44%), Gaps = 51/376 (13%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
SL+ EM+ +G P++YT + V K CS + G H ++R+G + + N+++ +
Sbjct: 98 SLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFH 157
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
C A LF+ + + V W+ M Y G +++++ +F +P KD V+WN +I
Sbjct: 158 ANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMIT 217
Query: 124 GLIR-------------------------------CGYERRALELLFCMVENGTEFSEVT 152
G ++ CGY + AL + M + G VT
Sbjct: 218 GCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVT 277
Query: 153 FXXXXXXXXXXXXVELGKQLHGRVI-TLALNGDNFINS----SLVEMYCKCGRTDKASVI 207
+E GK+LH ++ T +++ ++ + +L++MY KCG D+A +
Sbjct: 278 ILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEV 337
Query: 208 LKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVIS 267
+ V L T WN+++ G + E ++ F M + T VI
Sbjct: 338 FRGVKDRDLST--------WNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVIL 388
Query: 268 ACANAGLLEFGRQMHAYIQ---KIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EP 323
AC+++G ++ GR+ + ++ I I Y ++ M ++G L++A++ + EP
Sbjct: 389 ACSHSGRVDEGRKYFSLMRDMYNIEPNIKHY--GCMVDMLGRAGQLEEAFMFVESMKIEP 446
Query: 324 NVFLWTSMISGCALHG 339
N +W +++ C ++G
Sbjct: 447 NAIVWRTLLGACKIYG 462
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 227/472 (48%), Gaps = 55/472 (11%)
Query: 35 QLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAY 94
+ GK +HA +++ G D+ + +L L+LKC YA ++F+ + + +N MI Y
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 95 LGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFX 154
L G V++ L + + + + + +++ R + +L
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMIL---------------- 154
Query: 155 XXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVI---LKDV 211
L + +H R+I + D+ + ++LV+ Y K G+ + A + +KD
Sbjct: 155 ----------PRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDE 204
Query: 212 PL--------------------NLLRTGNSGGIVPWNSMVSGYVWNGKY-EDCLKTFRSM 250
+ + T IV +N+MV G+ +G+ + + + SM
Sbjct: 205 NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISM 264
Query: 251 VHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSL 310
+I T +VI AC+ E G+Q+HA I K G +GSSL+ MY+K G +
Sbjct: 265 QRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGI 324
Query: 311 DDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINAC 370
+DA +F Q+ E NVF WTSMI G +G ++A LF M I PN VTFLG ++AC
Sbjct: 325 NDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSAC 384
Query: 371 SHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHL--T 428
SH GL+++G F M+ Y + P +EH +VDL GRAG L K F F + +
Sbjct: 385 SHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDL--NKAFEFARAMPERPDS 442
Query: 429 SVWKSFLSSCRLHKNIEMGKWVSEMLLQV-APSDPEAYILLSNMCTSNHRWD 479
+W + LSSC LH N+E+ + L ++ A P AY+ LSN+ SN +WD
Sbjct: 443 DIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWD 494
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 172/351 (49%), Gaps = 20/351 (5%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNL-----QLGKGVHAWMLRNGVDADVVLVNSI 59
L + M G + YTLS V K ++ + L + VHA +++ V+ D VL+ ++
Sbjct: 122 LVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITAL 181
Query: 60 LDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN 119
+D Y+K E A +FE + +VV MI Y+ G VE + ++F KD+V +N
Sbjct: 182 VDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYN 241
Query: 120 TIIDGLIRCG-YERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVIT 178
+++G R G +R++++ M G + TF E+G+Q+H +++
Sbjct: 242 AMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMK 301
Query: 179 LALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG 238
+ + SSL++MY KCG + A + + + W SM+ GY NG
Sbjct: 302 SGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM--------QEKNVFSWTSMIDGYGKNG 353
Query: 239 KYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRIDAY 295
E+ L+ F M + T +SAC+++GL++ G ++ +Q+ + +++ Y
Sbjct: 354 NPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHY 413
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQINE-PNVFLWTSMISGCALHGKGKQAS 345
+ ++ + ++G L+ A+ R + E P+ +W +++S C LHG + AS
Sbjct: 414 --ACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELAS 462
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 223/460 (48%), Gaps = 42/460 (9%)
Query: 24 VFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGD 83
+ + C+ N++ G +H M++ G+++ S++ Y KC A R+FE + D
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRD 207
Query: 84 VVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVE 143
+V WN ++ +Y+ G ++++ + + + S R Y + L C +E
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLLKLMGSD---------KNRFRGDYFTFSSLLSACRIE 258
Query: 144 NGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDK 203
GKQ+H + ++ D + ++L+ MY K
Sbjct: 259 Q------------------------GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSD 294
Query: 204 ASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVT 263
A + + + +V WN+M+ G+ NG+ + ++ F M+ E D T
Sbjct: 295 ARECFESMVVR--------NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFA 346
Query: 264 TVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEP 323
+V+S+CA + +Q+ A + K G V +SLI YS++G+L +A + F I EP
Sbjct: 347 SVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREP 406
Query: 324 NVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYF 383
++ WTS+I A HG +++ +FE ML Q + P+++TFL V++ACSH GL++EG F
Sbjct: 407 DLVSWTSVIGALASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCF 465
Query: 384 RMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKN 443
+ M + Y I EH T ++DL GRAG + E + + T +F C +H+
Sbjct: 466 KRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEK 525
Query: 444 IEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAAM 483
E KW ++ LL++ P+ P Y +LSN S W++AA+
Sbjct: 526 RESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAAL 565
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 190/442 (42%), Gaps = 50/442 (11%)
Query: 38 KGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGA 97
K H +M++ G+ + L N +L Y K + F+ A++LF+ ++VTWNI+I +
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQ- 114
Query: 98 GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVE----NGTEFSEVTF 153
R G L FC + V+F
Sbjct: 115 -----------------------------RDGDTNHRAHLGFCYLSRILFTDVSLDHVSF 145
Query: 154 XXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPL 213
++ G QLH ++ L F ++SLV Y KCG +A + + V
Sbjct: 146 MGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVL- 204
Query: 214 NLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIV--DIRTVTTVISACAN 271
+V WN++VS YV NG ++ + M + D T ++++SAC
Sbjct: 205 -------DRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR- 256
Query: 272 AGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSM 331
+E G+Q+HA + K+ ++ D V ++L++MY+KS L DA F + NV W +M
Sbjct: 257 ---IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAM 313
Query: 332 ISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYC 391
I G A +G+G++A LF ML + + P+E+TF V+++C+ + E M+
Sbjct: 314 IVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGS 373
Query: 392 INPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVS 451
+ + S++ Y R G L E L S W S + + H E +
Sbjct: 374 AD-FLSVANSLISSYSRNGNLSEALLCFHSIREPDLVS-WTSVIGALASHGFAEESLQMF 431
Query: 452 EMLLQVAPSDPEAYILLSNMCT 473
E +LQ D ++ + + C+
Sbjct: 432 ESMLQKLQPDKITFLEVLSACS 453
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 231/486 (47%), Gaps = 51/486 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF+ M+ G + +TLS + C + L K +H + + G D+ + N+ + Y
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYS 184
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS-KDVVSWNTIID 123
K G + +++ +F + +D VSWN++I
Sbjct: 185 K-------------------------------GGLLREAVSVFYGMDELRDEVSWNSMIV 213
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
+ +AL L M+ G + T + G+Q HG++I +
Sbjct: 214 AYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ 273
Query: 184 DNFINSSLVEMYCKCGRTD---KASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
++ + S L++ Y KCG D + + +++ S +V WN+M+SGY N +
Sbjct: 274 NSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL--------SPDLVVWNTMISGYSMNEEL 325
Query: 241 -EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRIDAYV 296
E+ +K+FR M D + V SAC+N +Q+H K +RI V
Sbjct: 326 SEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS--V 383
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
++LI +Y KSG+L DA +F ++ E N + MI G A HG G +A L++ ML+ GI
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGI 443
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
PN++TF+ V++AC+H G ++EG YF MK+ + I P EH + M+DL GRAG L E +
Sbjct: 444 APNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 417 NFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNH 476
FI + W + L +CR HKN+ + + + L+ + P Y++L+NM
Sbjct: 504 RFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADAR 563
Query: 477 RWDEAA 482
+W+E A
Sbjct: 564 KWEEMA 569
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 191/391 (48%), Gaps = 13/391 (3%)
Query: 30 AEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNI 89
AE++L GK +HA +++ V + L N ++LY KC YA F T E +V ++N+
Sbjct: 20 AERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNV 79
Query: 90 MIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFS 149
+++AY + + +F +P D VS+NT+I G A+ L M + G E
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 150 EVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILK 209
F V+L KQLH ++ + + +N++ V Y K G +A +
Sbjct: 140 --GFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVF- 196
Query: 210 DVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISAC 269
++ LR V WNSM+ Y + + L ++ M+ + +D+ T+ +V++A
Sbjct: 197 -YGMDELRDE-----VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 270 ANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLD---DAWVIFRQINEPNVF 326
+ L GRQ H + K G +++VGS LI YSK G D D+ +F++I P++
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310
Query: 327 LWTSMISGCALHGK-GKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRM 385
+W +MISG +++ + ++A F M G P++ +F+ V +ACS++ + +
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 386 MKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
+ + + +++ LY ++G L + +
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDAR 401
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 220/473 (46%), Gaps = 40/473 (8%)
Query: 9 MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKA 68
M + G N T +S C + G+ +H ++ +G+ + ++ N+++ +Y K
Sbjct: 336 MISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI-- 393
Query: 69 FEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRC 128
G++ +S + +P +DVV+WN +I G
Sbjct: 394 -----------------------------GEMSESRRVLLQMPRRDVVAWNALIGGYAED 424
Query: 129 GYERRALELLFCMVENGTEFSEVTFXXXXXX-XXXXXXVELGKQLHGRVITLALNGDNFI 187
+AL M G + +T +E GK LH +++ D +
Sbjct: 425 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHV 484
Query: 188 NSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTF 247
+SL+ MY KCG + +L ++ I+ WN+M++ +G E+ LK
Sbjct: 485 KNSLITMYAKCGDLSSSQ--------DLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLV 536
Query: 248 RSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKS 307
M +D + + +SA A +LE G+Q+H K+G D+++ ++ MYSK
Sbjct: 537 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 596
Query: 308 GSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVI 367
G + + + ++ W +IS HG ++ + F ML GI P VTF+ ++
Sbjct: 597 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 656
Query: 368 NACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHL 427
ACSH GL+++G Y+ M+ + + P +EHC ++DL GR+G L E + FI + +
Sbjct: 657 TACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPN 716
Query: 428 TSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
VW+S L+SC++H N++ G+ +E L ++ P D Y+L SNM + RW++
Sbjct: 717 DLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWED 769
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 207/459 (45%), Gaps = 53/459 (11%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V +++ M+ +G N+ ++S V C K+ LG+ + ++++G+++ + + NS++
Sbjct: 127 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 186
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+ +YA +F+ E +D +SWN+I
Sbjct: 187 MLGSMGNVDYANYIFDQMSE-------------------------------RDTISWNSI 215
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
+ G+ + + M E + T + G+ +HG V+ +
Sbjct: 216 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 275
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ + ++L+ MY GR+ +A+++ K +P + ++ WNS+++ +V +G+
Sbjct: 276 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMP--------TKDLISWNSLMASFVNDGRSL 327
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
D L SM+ V+ T T+ ++AC E GR +H + G + +G++L+
Sbjct: 328 DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALV 387
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
MY K G + ++ + Q+ +V W ++I G A +A + F+ M +G+ N +
Sbjct: 388 SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYI 447
Query: 362 TFLGVINACSHVG-LLEEGSTYFRMMKDVYCINPGV---EHC-TSMVDLYGRAGCLIETK 416
T + V++AC G LLE G Y ++ G EH S++ +Y + G L ++
Sbjct: 448 TVVSVLSACLLPGDLLERGKPLH-----AYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 502
Query: 417 NFIFENGISHLTSV-WKSFLSSCRLHKN-IEMGKWVSEM 453
+ NG+ + + W + L++ H + E+ K VS+M
Sbjct: 503 DLF--NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 184/422 (43%), Gaps = 49/422 (11%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNL-QLGKGVHAWMLRNGVDADVVLVNSILDLY 63
FR+M G P+ + ++S+ C ++ + G VH ++ ++G+ +DV + +IL LY
Sbjct: 28 FFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLY 87
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
Y G V S +F +P ++VVSW +++
Sbjct: 88 ----------------------------GVY---GLVSCSRKVFEEMPDRNVVSWTSLMV 116
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
G G +++ M G +E + LG+Q+ G+V+ L
Sbjct: 117 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 176
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ +SL+ M G D A+ I + + + WNS+ + Y NG E+
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQM--------SERDTISWNSIAAAYAQNGHIEES 228
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
+ F M V+ TV+T++S + ++GR +H + K+G V ++L+ M
Sbjct: 229 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 288
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
Y+ +G +A ++F+Q+ ++ W S+++ G+ A L M++ G N VTF
Sbjct: 289 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 348
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH----CTSMVDLYGRAGCLIETKNFI 419
+ AC E+G R++ + ++ G+ + ++V +YG+ G + E++ +
Sbjct: 349 TSALAACFTPDFFEKG----RILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMSESRRVL 403
Query: 420 FE 421
+
Sbjct: 404 LQ 405
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 159/355 (44%), Gaps = 57/355 (16%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNL-QLGKGVHAWMLRNGVDADVVLVNSILD 61
+ F+ M+ +G N T+ SV C +L + GK +HA+++ G ++D + NS++
Sbjct: 431 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 490
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y KC ++ LF +++TWN M+ A G E+
Sbjct: 491 MYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE------------------- 531
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
L+L+ M G + +F +E G+QLHG + L
Sbjct: 532 ------------VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 579
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
D+FI ++ +MY KCG + ++K +P ++ R+ + WN ++S +G +E
Sbjct: 580 EHDSFIFNAAADMYSKCGEIGE---VVKMLPPSVNRS-----LPSWNILISALGRHGYFE 631
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK-------IGHRIDA 294
+ TF M+ T ++++AC++ GL++ G + I + I H I
Sbjct: 632 EVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI-- 689
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHG---KGKQAS 345
+I + +SG L +A ++ +PN +W S+++ C +HG +G++A+
Sbjct: 690 ----CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAA 740
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 150/337 (44%), Gaps = 27/337 (8%)
Query: 110 LPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSE-VTFXXXXXXXXXXXXVEL 168
+P ++ VSWNT++ G++R G +E M + G + S V
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
G Q+HG V L D +++++++ +Y G + + +++P +V W
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP--------DRNVVSWT 112
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLE---FGRQMHAYI 285
S++ GY G+ E+ + ++ M E + +++ VIS+C GLL+ GRQ+ +
Sbjct: 113 SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQV 169
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQAS 345
K G V +SLI M G++D A IF Q++E + W S+ + A +G +++
Sbjct: 170 VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF 229
Query: 346 SLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM-----KDVYCINPGVEHCT 400
+F M N T +++ HV + G ++ V C+ C
Sbjct: 230 RIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV------CN 283
Query: 401 SMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSS 437
+++ +Y AG +E N +F+ + W S ++S
Sbjct: 284 TLLRMYAGAGRSVEA-NLVFKQMPTKDLISWNSLMAS 319
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 118/226 (52%), Gaps = 11/226 (4%)
Query: 225 VPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAG-LLEFGRQMHA 283
V WN+M+SG V G Y + ++ FR M + ++++AC +G + G Q+H
Sbjct: 7 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 66
Query: 284 YIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQ 343
++ K G D YV ++++H+Y G + + +F ++ + NV WTS++ G + G+ ++
Sbjct: 67 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 126
Query: 344 ASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHC---- 399
+++GM +G+ NE + VI++C GLL++ S +++ V + G+E
Sbjct: 127 VIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQV--VKSGLESKLAVE 181
Query: 400 TSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIE 445
S++ + G G ++ N+IF+ T W S ++ + +IE
Sbjct: 182 NSLISMLGSMGN-VDYANYIFDQMSERDTISWNSIAAAYAQNGHIE 226
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 220/473 (46%), Gaps = 40/473 (8%)
Query: 9 MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKA 68
M + G N T +S C + G+ +H ++ +G+ + ++ N+++ +Y K
Sbjct: 353 MISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI-- 410
Query: 69 FEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRC 128
G++ +S + +P +DVV+WN +I G
Sbjct: 411 -----------------------------GEMSESRRVLLQMPRRDVVAWNALIGGYAED 441
Query: 129 GYERRALELLFCMVENGTEFSEVTFXXXXXX-XXXXXXVELGKQLHGRVITLALNGDNFI 187
+AL M G + +T +E GK LH +++ D +
Sbjct: 442 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHV 501
Query: 188 NSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTF 247
+SL+ MY KCG + +L ++ I+ WN+M++ +G E+ LK
Sbjct: 502 KNSLITMYAKCGDLSSSQ--------DLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLV 553
Query: 248 RSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKS 307
M +D + + +SA A +LE G+Q+H K+G D+++ ++ MYSK
Sbjct: 554 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 613
Query: 308 GSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVI 367
G + + + ++ W +IS HG ++ + F ML GI P VTF+ ++
Sbjct: 614 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 673
Query: 368 NACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHL 427
ACSH GL+++G Y+ M+ + + P +EHC ++DL GR+G L E + FI + +
Sbjct: 674 TACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPN 733
Query: 428 TSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
VW+S L+SC++H N++ G+ +E L ++ P D Y+L SNM + RW++
Sbjct: 734 DLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWED 786
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 207/459 (45%), Gaps = 53/459 (11%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V +++ M+ +G N+ ++S V C K+ LG+ + ++++G+++ + + NS++
Sbjct: 144 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 203
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+ +YA +F+ E +D +SWN+I
Sbjct: 204 MLGSMGNVDYANYIFDQMSE-------------------------------RDTISWNSI 232
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
+ G+ + + M E + T + G+ +HG V+ +
Sbjct: 233 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 292
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ + ++L+ MY GR+ +A+++ K +P + ++ WNS+++ +V +G+
Sbjct: 293 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMP--------TKDLISWNSLMASFVNDGRSL 344
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
D L SM+ V+ T T+ ++AC E GR +H + G + +G++L+
Sbjct: 345 DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALV 404
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
MY K G + ++ + Q+ +V W ++I G A +A + F+ M +G+ N +
Sbjct: 405 SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYI 464
Query: 362 TFLGVINACSHVG-LLEEGSTYFRMMKDVYCINPGV---EHC-TSMVDLYGRAGCLIETK 416
T + V++AC G LLE G Y ++ G EH S++ +Y + G L ++
Sbjct: 465 TVVSVLSACLLPGDLLERGKPLH-----AYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 519
Query: 417 NFIFENGISHLTSV-WKSFLSSCRLHKN-IEMGKWVSEM 453
+ NG+ + + W + L++ H + E+ K VS+M
Sbjct: 520 DLF--NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 556
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 184/422 (43%), Gaps = 49/422 (11%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNL-QLGKGVHAWMLRNGVDADVVLVNSILDLY 63
FR+M G P+ + ++S+ C ++ + G VH ++ ++G+ +DV + +IL LY
Sbjct: 45 FFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLY 104
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
Y G V S +F +P ++VVSW +++
Sbjct: 105 ----------------------------GVY---GLVSCSRKVFEEMPDRNVVSWTSLMV 133
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
G G +++ M G +E + LG+Q+ G+V+ L
Sbjct: 134 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 193
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ +SL+ M G D A+ I + + + WNS+ + Y NG E+
Sbjct: 194 KLAVENSLISMLGSMGNVDYANYIFDQM--------SERDTISWNSIAAAYAQNGHIEES 245
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
+ F M V+ TV+T++S + ++GR +H + K+G V ++L+ M
Sbjct: 246 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 305
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
Y+ +G +A ++F+Q+ ++ W S+++ G+ A L M++ G N VTF
Sbjct: 306 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 365
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH----CTSMVDLYGRAGCLIETKNFI 419
+ AC E+G R++ + ++ G+ + ++V +YG+ G + E++ +
Sbjct: 366 TSALAACFTPDFFEKG----RILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 420 FE 421
+
Sbjct: 421 LQ 422
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 159/355 (44%), Gaps = 57/355 (16%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNL-QLGKGVHAWMLRNGVDADVVLVNSILD 61
+ F+ M+ +G N T+ SV C +L + GK +HA+++ G ++D + NS++
Sbjct: 448 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 507
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y KC ++ LF +++TWN M+ A G E+
Sbjct: 508 MYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE------------------- 548
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
L+L+ M G + +F +E G+QLHG + L
Sbjct: 549 ------------VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 596
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
D+FI ++ +MY KCG + ++K +P ++ R+ + WN ++S +G +E
Sbjct: 597 EHDSFIFNAAADMYSKCGEIGE---VVKMLPPSVNRS-----LPSWNILISALGRHGYFE 648
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK-------IGHRIDA 294
+ TF M+ T ++++AC++ GL++ G + I + I H I
Sbjct: 649 EVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI-- 706
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHG---KGKQAS 345
+I + +SG L +A ++ +PN +W S+++ C +HG +G++A+
Sbjct: 707 ----CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAA 757
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 157/353 (44%), Gaps = 27/353 (7%)
Query: 94 YLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSE-VT 152
Y G V+ + +F +P ++ VSWNT++ G++R G +E M + G + S V
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 153 FXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVP 212
G Q+HG V L D +++++++ +Y G + + +++P
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 213 LNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANA 272
+V W S++ GY G+ E+ + ++ M E + +++ VIS+C
Sbjct: 122 --------DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC--- 170
Query: 273 GLLE---FGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWT 329
GLL+ GRQ+ + K G V +SLI M G++D A IF Q++E + W
Sbjct: 171 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 230
Query: 330 SMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM--- 386
S+ + A +G +++ +F M N T +++ HV + G ++
Sbjct: 231 SIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM 290
Query: 387 --KDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSS 437
V C+ C +++ +Y AG +E N +F+ + W S ++S
Sbjct: 291 GFDSVVCV------CNTLLRMYAGAGRSVEA-NLVFKQMPTKDLISWNSLMAS 336
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 128/257 (49%), Gaps = 19/257 (7%)
Query: 194 MYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHE 253
MY K GR A + +P+ V WN+M+SG V G Y + ++ FR M
Sbjct: 1 MYTKFGRVKPARHLFDIMPVR--------NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL 52
Query: 254 LAIVDIRTVTTVISACANAG-LLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDD 312
+ ++++AC +G + G Q+H ++ K G D YV ++++H+Y G +
Sbjct: 53 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 112
Query: 313 AWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSH 372
+ +F ++ + NV WTS++ G + G+ ++ +++GM +G+ NE + VI++C
Sbjct: 113 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC-- 170
Query: 373 VGLLEEGSTYFRMMKDVYCINPGVEHC----TSMVDLYGRAGCLIETKNFIFENGISHLT 428
GLL++ S +++ V + G+E S++ + G G ++ N+IF+ T
Sbjct: 171 -GLLKDESLGRQIIGQV--VKSGLESKLAVENSLISMLGSMGN-VDYANYIFDQMSERDT 226
Query: 429 SVWKSFLSSCRLHKNIE 445
W S ++ + +IE
Sbjct: 227 ISWNSIAAAYAQNGHIE 243
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 237/484 (48%), Gaps = 42/484 (8%)
Query: 2 VFSLFREMQA-KGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
V LF +M+ G PN T+ +F L+ GK VH + R G D+V+ IL
Sbjct: 188 VIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGIL 247
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
D+Y K K YA R+F+L + + VTW+ MI Y+ ++++ ++F + D V+ T
Sbjct: 248 DVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVT 307
Query: 121 IID-GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
+ GLI G R F +++ G+ +H +
Sbjct: 308 PVAIGLILMGCAR---------------FGDLSG---------------GRCVHCYAVKA 337
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
D + ++++ Y K G A ++ L ++ +NS+++G V N +
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK--------DVISYNSLITGCVVNCR 389
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
E+ + F M DI T+ V++AC++ L G H Y G+ ++ + ++
Sbjct: 390 PEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNA 449
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
L+ MY+K G LD A +F +++ ++ W +M+ G +HG GK+A SLF M G+ P+
Sbjct: 450 LMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPD 509
Query: 360 EVTFLGVINACSHVGLLEEGSTYFR-MMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
EVT L +++ACSH GL++EG F M + + + P ++H M DL RAG L E +F
Sbjct: 510 EVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDF 569
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRW 478
+ + V + LS+C +KN E+G VS+ + + + E+ +LLSN ++ RW
Sbjct: 570 VNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGET-TESLVLLSNTYSAAERW 628
Query: 479 DEAA 482
++AA
Sbjct: 629 EDAA 632
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 210/480 (43%), Gaps = 51/480 (10%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
L+ +M G P +YT V K C+ + + GK +H+ + + D+ + +++D
Sbjct: 88 LDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDF 147
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC G++E ++ +F +P +D+V+WN +I
Sbjct: 148 YAKC-------------------------------GELEMAIKVFDEMPKRDMVAWNAMI 176
Query: 123 DGL-IRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
G + C L +G + T + GK +HG +
Sbjct: 177 SGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF 236
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ D + + ++++Y K +I +L N V W++M+ GYV N +
Sbjct: 237 SNDLVVKTGILDVYAK-----SKCIIYARRVFDLDFKKNE---VTWSAMIGGYVENEMIK 288
Query: 242 DCLKTFRSMV--HELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
+ + F M+ +A+V + ++ CA G L GR +H Y K G +D V ++
Sbjct: 289 EAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNT 348
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
+I Y+K GSL DA+ F +I +V + S+I+GC ++ + +++ LF M GI P+
Sbjct: 349 IISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPD 408
Query: 360 EVTFLGVINACSHVGLLEEGST-YFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
T LGV+ ACSH+ L GS+ + + Y +N + C +++D+Y + G L K
Sbjct: 409 ITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSI--CNALMDMYTKCGKLDVAKR- 465
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEML--LQVAPSDPEAYILLSNMCTSNH 476
+F+ W + L +H +GK + +Q +P+ LL+ + +H
Sbjct: 466 VFDTMHKRDIVSWNTMLFGFGIHG---LGKEALSLFNSMQETGVNPDEVTLLAILSACSH 522
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 183/424 (43%), Gaps = 51/424 (12%)
Query: 23 SVFKCCSAEKNLQLGKGVHAWMLRNGV--DADVVLVNSILDLYLKCKAFEYAERLFELTG 80
S+ + C +NL LG+ +H +L+ + + VLVN + LY C E A +F+
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIP 62
Query: 81 EGDV--VTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELL 138
+ + W++MIRAY S D + +AL+L
Sbjct: 63 HPRINPIAWDLMIRAY----------------ASND---------------FAEKALDLY 91
Query: 139 FCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKC 198
+ M+ +G ++ T+ ++ GK +H V D ++ ++LV+ Y KC
Sbjct: 92 YKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKC 151
Query: 199 GRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI-V 257
G + A + ++P +V WN+M+SG+ + D + F M +
Sbjct: 152 GELEMAIKVFDEMP--------KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSP 203
Query: 258 DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF 317
++ T+ + A AG L G+ +H Y ++G D V + ++ +Y+KS + A +F
Sbjct: 204 NLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF 263
Query: 318 RQINEPNVFLWTSMISGCALHGKGKQASSLFEGML-NQGIVPNEVTFLGVI-NACSHVGL 375
+ N W++MI G + K+A +F ML N + +G+I C+ G
Sbjct: 264 DLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGD 323
Query: 376 LEEGS-TYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSF 434
L G + +K + ++ V++ +++ Y + G L + E G+ + S + S
Sbjct: 324 LSGGRCVHCYAVKAGFILDLTVQN--TIISFYAKYGSLCDAFRQFSEIGLKDVIS-YNSL 380
Query: 435 LSSC 438
++ C
Sbjct: 381 ITGC 384
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 131/305 (42%), Gaps = 21/305 (6%)
Query: 168 LGKQLHGRVITLALN-GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP 226
LG+ +H ++ +L + + +L +Y C + A + ++P + +
Sbjct: 17 LGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINP------IA 70
Query: 227 WNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ 286
W+ M+ Y N E L + M++ T V+ ACA ++ G+ +H+++
Sbjct: 71 WDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVN 130
Query: 287 KIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
D YV ++L+ Y+K G L+ A +F ++ + ++ W +MISG +LH
Sbjct: 131 CSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIG 190
Query: 347 LFEGMLN-QGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH----CTS 401
LF M G+ PN T +G+ A G L EG YC G + T
Sbjct: 191 LFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHG-----YCTRMGFSNDLVVKTG 245
Query: 402 MVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSD 461
++D+Y ++ C+I + +F+ W + + + EM K E+ Q+ +D
Sbjct: 246 ILDVYAKSKCIIYARR-VFDLDFKKNEVTWSAMIGG---YVENEMIKEAGEVFFQMLVND 301
Query: 462 PEAYI 466
A +
Sbjct: 302 NVAMV 306
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 239/486 (49%), Gaps = 18/486 (3%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
S+++ M +KG +++T SV K C+A + G+ VH + + ++ + N+++ +Y
Sbjct: 170 SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY 229
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGA---GDVEKSLD-MFRNLPSKDVVSWN 119
+ + A RLF+ E D V+WN +I Y G+ K LD M+ + +V+WN
Sbjct: 230 KRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWN 289
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI-- 177
TI G + G AL + M V ++ GK H VI
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 178 -TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
+ + + DN + +SL+ MY +C A ++ + V N L T WNS++SG+ +
Sbjct: 350 CSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLST--------WNSIISGFAY 400
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
N + E+ + M+ + T+ +++ A G L+ G++ H YI + D +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 297 -GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG 355
+SL+ MY+KSG + A +F + + + +TS+I G GKG+ A + F+ M G
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 356 IVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET 415
I P+ VT + V++ACSH L+ EG F M+ V+ I +EH + MVDLY RAG L +
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 416 KNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSE-MLLQVAPSDPEAYILLSNMCTS 474
++ +++ + L +C +H N +G+W ++ +LL+ P Y+LL++M
Sbjct: 581 RDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAV 640
Query: 475 NHRWDE 480
W +
Sbjct: 641 TGSWSK 646
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 175/435 (40%), Gaps = 76/435 (17%)
Query: 19 YTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFEL 78
Y+ +S+ C G+ +HA + +G++ D VLV ++ Y F L
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFY----------SAFNL 133
Query: 79 TGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELL 138
E +T N ++ LP WN +I IR + ++ +
Sbjct: 134 LDEAQTITENS---------------EILHPLP------WNVLIGSYIRNKRFQESVSVY 172
Query: 139 FCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKC 198
M+ G E T+ G+ +HG + + + ++ ++L+ MY +
Sbjct: 173 KRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRF 232
Query: 199 GRTDKASVILKDV-----------------------PLNLLR----TGNSGGIVPWNSMV 231
G+ D A + + LL +G IV WN++
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 232 SGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---I 288
G + G Y L M + + + + AC++ G L++G+ H + +
Sbjct: 293 GGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSF 352
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
H ID V +SLI MYS+ L A+++F+Q+ ++ W S+ISG A + + ++ S L
Sbjct: 353 SHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLL 411
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCI---NPGVEHC----TS 401
+ ML G PN +T ++ + VG L+ G K+ +C + C S
Sbjct: 412 KEMLLSGFHPNHITLASILPLFARVGNLQHG-------KEFHCYILRRQSYKDCLILWNS 464
Query: 402 MVDLYGRAGCLIETK 416
+VD+Y ++G +I K
Sbjct: 465 LVDMYAKSGEIIAAK 479
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 142/326 (43%), Gaps = 50/326 (15%)
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGI--VP 226
G+QLH I+ L D+ + LV Y D+A I T NS + +P
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTI----------TENSEILHPLP 151
Query: 227 WNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ 286
WN ++ Y+ N ++++ + ++ M+ + D T +VI ACA +GR +H I+
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 287 KIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
HR + YV ++LI MY + G +D A +F +++E + W ++I+ K +A
Sbjct: 212 VSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFK 271
Query: 347 LFEGMLNQGIVPNEVT-------------FLGVIN----------------------ACS 371
L + M G+ + VT ++G +N ACS
Sbjct: 272 LLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACS 331
Query: 372 HVGLLEEGSTYFRMMKDVYCINPGVEHC-TSMVDLYGRAGCLIETKNFIFENGISHLTSV 430
H+G L+ G + ++ + +++ S++ +Y R L +F+ ++ S
Sbjct: 332 HIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDL-RHAFIVFQQVEANSLST 390
Query: 431 WKSFLSSCRLHKNIEMGKW-VSEMLL 455
W S +S ++ E + + EMLL
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLL 416
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 237 NGKYEDCLKTF-----RSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR 291
+G+ + +TF +S HE + + +++S C G+Q+HA+ G
Sbjct: 59 HGQLYEAFRTFSLLRYQSGSHEFVLY---SSASLLSTCVGFNEFVPGQQLHAHCISSGLE 115
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGM 351
D+ + L+ YS LD+A I + W +I + + +++ S+++ M
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM 175
Query: 352 LNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK---DVYCINPGVEHCTSMVDLYGR 408
+++GI +E T+ VI AC+ LL+ Y R++ +V + C +++ +Y R
Sbjct: 176 MSKGIRADEFTYPSVIKACA--ALLD--FAYGRVVHGSIEVSSHRCNLYVCNALISMYKR 231
Query: 409 AG 410
G
Sbjct: 232 FG 233
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 239/486 (49%), Gaps = 18/486 (3%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
S+++ M +KG +++T SV K C+A + G+ VH + + ++ + N+++ +Y
Sbjct: 170 SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY 229
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGA---GDVEKSLD-MFRNLPSKDVVSWN 119
+ + A RLF+ E D V+WN +I Y G+ K LD M+ + +V+WN
Sbjct: 230 KRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWN 289
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI-- 177
TI G + G AL + M V ++ GK H VI
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 178 -TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
+ + + DN + +SL+ MY +C A ++ + V N L T WNS++SG+ +
Sbjct: 350 CSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLST--------WNSIISGFAY 400
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
N + E+ + M+ + T+ +++ A G L+ G++ H YI + D +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 297 -GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG 355
+SL+ MY+KSG + A +F + + + +TS+I G GKG+ A + F+ M G
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 356 IVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET 415
I P+ VT + V++ACSH L+ EG F M+ V+ I +EH + MVDLY RAG L +
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 416 KNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSE-MLLQVAPSDPEAYILLSNMCTS 474
++ +++ + L +C +H N +G+W ++ +LL+ P Y+LL++M
Sbjct: 581 RDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAV 640
Query: 475 NHRWDE 480
W +
Sbjct: 641 TGSWSK 646
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 175/435 (40%), Gaps = 76/435 (17%)
Query: 19 YTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFEL 78
Y+ +S+ C G+ +HA + +G++ D VLV ++ Y F L
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFY----------SAFNL 133
Query: 79 TGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELL 138
E +T N ++ LP WN +I IR + ++ +
Sbjct: 134 LDEAQTITENS---------------EILHPLP------WNVLIGSYIRNKRFQESVSVY 172
Query: 139 FCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKC 198
M+ G E T+ G+ +HG + + + ++ ++L+ MY +
Sbjct: 173 KRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRF 232
Query: 199 GRTDKASVILKDV-----------------------PLNLLR----TGNSGGIVPWNSMV 231
G+ D A + + LL +G IV WN++
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 232 SGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---I 288
G + G Y L M + + + + AC++ G L++G+ H + +
Sbjct: 293 GGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSF 352
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
H ID V +SLI MYS+ L A+++F+Q+ ++ W S+ISG A + + ++ S L
Sbjct: 353 SHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLL 411
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCI---NPGVEHC----TS 401
+ ML G PN +T ++ + VG L+ G K+ +C + C S
Sbjct: 412 KEMLLSGFHPNHITLASILPLFARVGNLQHG-------KEFHCYILRRQSYKDCLILWNS 464
Query: 402 MVDLYGRAGCLIETK 416
+VD+Y ++G +I K
Sbjct: 465 LVDMYAKSGEIIAAK 479
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 142/326 (43%), Gaps = 50/326 (15%)
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGI--VP 226
G+QLH I+ L D+ + LV Y D+A I T NS + +P
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTI----------TENSEILHPLP 151
Query: 227 WNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ 286
WN ++ Y+ N ++++ + ++ M+ + D T +VI ACA +GR +H I+
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 287 KIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
HR + YV ++LI MY + G +D A +F +++E + W ++I+ K +A
Sbjct: 212 VSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFK 271
Query: 347 LFEGMLNQGIVPNEVT-------------FLGVIN----------------------ACS 371
L + M G+ + VT ++G +N ACS
Sbjct: 272 LLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACS 331
Query: 372 HVGLLEEGSTYFRMMKDVYCINPGVEHC-TSMVDLYGRAGCLIETKNFIFENGISHLTSV 430
H+G L+ G + ++ + +++ S++ +Y R L +F+ ++ S
Sbjct: 332 HIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDL-RHAFIVFQQVEANSLST 390
Query: 431 WKSFLSSCRLHKNIEMGKW-VSEMLL 455
W S +S ++ E + + EMLL
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLL 416
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 237 NGKYEDCLKTF-----RSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR 291
+G+ + +TF +S HE + + +++S C G+Q+HA+ G
Sbjct: 59 HGQLYEAFRTFSLLRYQSGSHEFVLY---SSASLLSTCVGFNEFVPGQQLHAHCISSGLE 115
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGM 351
D+ + L+ YS LD+A I + W +I + + +++ S+++ M
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM 175
Query: 352 LNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK---DVYCINPGVEHCTSMVDLYGR 408
+++GI +E T+ VI AC+ LL+ Y R++ +V + C +++ +Y R
Sbjct: 176 MSKGIRADEFTYPSVIKACA--ALLD--FAYGRVVHGSIEVSSHRCNLYVCNALISMYKR 231
Query: 409 AG 410
G
Sbjct: 232 FG 233
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 228/496 (45%), Gaps = 80/496 (16%)
Query: 23 SVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFE-------YAERL 75
++ + CS+ +L++ +H ++LR + +DV + + +L L + F YA +
Sbjct: 17 ALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
F ++ +N++IR + + K+ + + + N LI+ E
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC- 132
Query: 136 ELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMY 195
V +G+Q H +++ D ++ +SLV MY
Sbjct: 133 ------------------------------VLVGEQTHSQIVRFGFQNDVYVENSLVHMY 162
Query: 196 -------------------------------CKCGRTDKASVILKDVPLNLLRTGNSGGI 224
CKCG + A + ++P L T
Sbjct: 163 ANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFT------ 216
Query: 225 VPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY 284
W+ M++GY N +E + F M E + + + +VIS+CA+ G LEFG + + Y
Sbjct: 217 --WSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEY 274
Query: 285 IQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQA 344
+ K ++ +G++L+ M+ + G ++ A +F + E + W+S+I G A+HG +A
Sbjct: 275 VVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKA 334
Query: 345 SSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVD 404
F M++ G +P +VTF V++ACSH GL+E+G + MK + I P +EH +VD
Sbjct: 335 MHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVD 394
Query: 405 LYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEA 464
+ GRAG L E +NFI + + + + L +C+++KN E+ + V ML++V P
Sbjct: 395 MLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGY 454
Query: 465 YILLSNMCTSNHRWDE 480
Y+LLSN+ +WD+
Sbjct: 455 YVLLSNIYACAGQWDK 470
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 161/340 (47%), Gaps = 14/340 (4%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F + +M P+ T + K S + + +G+ H+ ++R G DV + NS++ +
Sbjct: 102 FGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHM 161
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y C A R+F G DVV+W M+ Y G VE + +MF +P +++ +W+ +I
Sbjct: 162 YANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMI 221
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
+G + +A++L M G +E +E G++ + V+ +
Sbjct: 222 NGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMT 281
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ + ++LV+M+ +CG +KA + + +P + W+S++ G +G
Sbjct: 282 VNLILGTALVDMFWRCGDIEKAIHVFEGLP--------ETDSLSWSSIIKGLAVHGHAHK 333
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRIDAYVGSS 299
+ F M+ I T T V+SAC++ GL+E G +++ ++K I R++ Y
Sbjct: 334 AMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHY--GC 391
Query: 300 LIHMYSKSGSLDDAW-VIFRQINEPNVFLWTSMISGCALH 338
++ M ++G L +A I + +PN + +++ C ++
Sbjct: 392 IVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIY 431
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 230/480 (47%), Gaps = 39/480 (8%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
LF ++ G + +T V K C+ + +LG +H+ +++ G + DV + S+L +
Sbjct: 96 LDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSI 155
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y G+G + + +F +P + VV+W +
Sbjct: 156 YS-------------------------------GSGRLNDAHKLFDEIPDRSVVTWTALF 184
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G G R A++L MVE G + ++ G+ + + + +
Sbjct: 185 SGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQ 244
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
++F+ ++LV +Y KCG+ +KA + + IV W++M+ GY N ++
Sbjct: 245 KNSFVRTTLVNLYAKCGKMEKARSVFDSMV--------EKDIVTWSTMIQGYASNSFPKE 296
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
++ F M+ E D ++ +S+CA+ G L+ G + I + + ++ ++LI
Sbjct: 297 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MY+K G++ + +F+++ E ++ + + ISG A +G K + ++F GI P+ T
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 416
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
FLG++ C H GL+++G +F + VY + VEH MVDL+GRAG L + I +
Sbjct: 417 FLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDM 476
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
+ VW + LS CRL K+ ++ + V + L+ + P + Y+ LSN+ + RWDEAA
Sbjct: 477 PMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAA 536
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 160/330 (48%), Gaps = 9/330 (2%)
Query: 83 DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMV 142
D N++++ L + S +F + ++ +N++I+G + L+L +
Sbjct: 44 DTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIR 103
Query: 143 ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTD 202
++G TF +LG LH V+ N D +SL+ +Y GR +
Sbjct: 104 KHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLN 163
Query: 203 KASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTV 262
A + ++P +V W ++ SGY +G++ + + F+ MV D +
Sbjct: 164 DAHKLFDEIP--------DRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFI 215
Query: 263 TTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE 322
V+SAC + G L+ G + Y++++ + +++V ++L+++Y+K G ++ A +F + E
Sbjct: 216 VQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVE 275
Query: 323 PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTY 382
++ W++MI G A + K+ LF ML + + P++ + +G +++C+ +G L+ G
Sbjct: 276 KDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWG 335
Query: 383 FRMMKDVYCINPGVEHCTSMVDLYGRAGCL 412
++ D + + +++D+Y + G +
Sbjct: 336 ISLI-DRHEFLTNLFMANALIDMYAKCGAM 364
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 221/462 (47%), Gaps = 38/462 (8%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
SLFR+M PN TL+SV + C+ +LGK +H + ++ +++++ +++ +Y
Sbjct: 387 SLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMY 446
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
KC F A + FE D V +N + + Y GD K+ D+++N+ V + +
Sbjct: 447 AKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMV 506
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
G+++ FC ++++ G ++G++I +
Sbjct: 507 GMLQ--------TCAFC-----SDYAR------------------GSCVYGQIIKHGFDS 535
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ + +L+ M+ KC A+++L D + G V WN M++GY+ +G+ E+
Sbjct: 536 ECHVAHALINMFTKCDAL-AAAIVLFD------KCGFEKSTVSWNIMMNGYLLHGQAEEA 588
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
+ TFR M E + T ++ A A L G +H+ + + G VG+SL+ M
Sbjct: 589 VATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDM 648
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
Y+K G ++ + F +I+ + W +M+S A HG A SLF M + P+ V+F
Sbjct: 649 YAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSF 708
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
L V++AC H GL+EEG F M + + I VEH MVDL G+AG E +
Sbjct: 709 LSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMR 768
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAY 465
+ VW + L+S R+H N+ + L+++ P +P Y
Sbjct: 769 VKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY 810
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 186/417 (44%), Gaps = 56/417 (13%)
Query: 33 NLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIR 92
+L G +H + ++ G+ DV + S++ +Y KC E AE+LF + DVV+W+ MI
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374
Query: 93 AYLGAGDVEKSLDMFRNLP----SKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEF 148
+Y AG ++++ +FR++ + V+ +++ G R
Sbjct: 375 SYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASR---------------- 418
Query: 149 SEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVIL 208
LGK +H I + + ++++ MY KCGR A
Sbjct: 419 -------------------LGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAF 459
Query: 209 KDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISA 268
+ +P+ V +N++ GY G +++M D RT+ ++
Sbjct: 460 ERLPIK--------DAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQT 511
Query: 269 CANAGLLEFGRQMHAYIQKIGHRIDA--YVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNV 325
CA ++ R Y Q I H D+ +V +LI+M++K +L A V+F + E +
Sbjct: 512 CAFCS--DYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKST 569
Query: 326 FLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG-STYFR 384
W M++G LHG+ ++A + F M + PN VTF+ ++ A + + L G S +
Sbjct: 570 VSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSS 629
Query: 385 MMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH 441
+++ +C V + S+VD+Y + G + ++ E ++ S W + LS+ H
Sbjct: 630 LIQCGFCSQTPVGN--SLVDMYAKCGMIESSEKCFIEISNKYIVS-WNTMLSAYAAH 683
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 178/410 (43%), Gaps = 60/410 (14%)
Query: 10 QAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAF 69
+ KG P++Y+ + K C+ + + G +H + G+++DV + +++++Y K
Sbjct: 92 EEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCK---- 147
Query: 70 EYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCG 129
A D+ + +F + KDVV+WNT++ GL + G
Sbjct: 148 ---------------------------ARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 130 YERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFI-- 187
AL L M + V+ ++ + LHG VI FI
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK-----KGFIFA 235
Query: 188 -NSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKT 246
+S L++MYC C A + ++V R S W +M++ Y NG +E+ L+
Sbjct: 236 FSSGLIDMYCNCADLYAAESVFEEV----WRKDESS----WGTMMAAYAHNGFFEEVLEL 287
Query: 247 FRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSK 306
F M + ++ + + A A G L G +H Y + G D V +SL+ MYSK
Sbjct: 288 FDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSK 347
Query: 307 SGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGV 366
G L+ A +F I + +V W++MI+ G+ +A SLF M+ I PN VT V
Sbjct: 348 CGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSV 407
Query: 367 INACSHVGLLEEGSTYFRMMKDVYC------INPGVEHCTSMVDLYGRAG 410
+ C+ G R+ K ++C I +E T+++ +Y + G
Sbjct: 408 LQGCA-------GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCG 450
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 159/342 (46%), Gaps = 48/342 (14%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F +++ M+ G CP+ T+ + + C+ + G V+ ++++G D++ + ++++++
Sbjct: 487 FDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINM 546
Query: 63 YLKCKAFEYAERLFELTG-EGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+ KC A A LF+ G E V+WNIM+ YL G E+++ FR + +
Sbjct: 547 FTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVT 606
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
++R E AL +G +H +I
Sbjct: 607 FVNIVRAAAELSAL-------------------------------RVGMSVHSSLIQCGF 635
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ +SLV+MY KCG + + ++ ++ IV WN+M+S Y +G
Sbjct: 636 CSQTPVGNSLVDMYAKCGMIESSEKCFIEI--------SNKYIVSWNTMLSAYAAHGLAS 687
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG--HRIDAYVG-- 297
+ F SM D + +V+SAC +AGL+E G+++ +++G H+I+A V
Sbjct: 688 CAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI---FEEMGERHKIEAEVEHY 744
Query: 298 SSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
+ ++ + K+G +A + R++ + +V +W ++++ +H
Sbjct: 745 ACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 146/357 (40%), Gaps = 11/357 (3%)
Query: 90 MIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFS 149
+I Y D+ + +F + KD SW T++ G+ LEL M +
Sbjct: 240 LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMN 299
Query: 150 EVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILK 209
+V + G +H + L GD + +SL+ MY KCG + A +
Sbjct: 300 KVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 210 DVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISAC 269
++ +V W++M++ Y G++++ + FR M+ + T+T+V+ C
Sbjct: 360 NI--------EDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC 411
Query: 270 ANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWT 329
A G+ +H Y K + +++I MY+K G A F ++ + +
Sbjct: 412 AGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFN 471
Query: 330 SMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGS-TYFRMMKD 388
++ G G +A +++ M G+ P+ T +G++ C+ GS Y +++K
Sbjct: 472 ALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKH 531
Query: 389 VYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIE 445
+ V H ++++++ + L + G T W ++ LH E
Sbjct: 532 GFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 149/355 (41%), Gaps = 21/355 (5%)
Query: 88 NIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVE-NGT 146
N +I AY + S +F ++ VV WN++I G R G R AL M E G
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 147 EFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASV 206
+ + +F + G ++H + + L D +I ++LVEMYCK A
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQ 156
Query: 207 ILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVI 266
+ + + +V WN+MVSG NG L F M +D ++ +I
Sbjct: 157 VFDKMHVK--------DVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLI 208
Query: 267 SACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVF 326
A + + R +H + K G I A+ S LI MY L A +F ++ +
Sbjct: 209 PAVSKLEKSDVCRCLHGLVIKKGF-IFAF-SSGLIDMYCNCADLYAAESVFEEVWRKDES 266
Query: 327 LWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM 386
W +M++ A +G ++ LF+ M N + N+V + A ++VG L +G
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHD-- 324
Query: 387 KDVYCINPG----VEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSS 437
Y + G V TS++ +Y + G L E +F N W + ++S
Sbjct: 325 ---YAVQQGLIGDVSVATSLMSMYSKCGEL-EIAEQLFINIEDRDVVSWSAMIAS 375
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 171 QLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSM 230
Q+HG +I L N L+ Y R D + VI V G+V WNSM
Sbjct: 23 QVHGSLIVSGLKPHN----QLINAYSLFQRQDLSRVIFDSV--------RDPGVVLWNSM 70
Query: 231 VSGYVWNGKYEDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQKIG 289
+ GY G + + L F M E I D + T + ACA + + G ++H I ++G
Sbjct: 71 IRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMG 130
Query: 290 HRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFE 349
D Y+G++L+ MY K+ L A +F +++ +V W +M+SG A +G A LF
Sbjct: 131 LESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFH 190
Query: 350 GMLNQGIVPNEVTFLGVINACS 371
M + + + V+ +I A S
Sbjct: 191 DMRSCCVDIDHVSLYNLIPAVS 212
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 218/478 (45%), Gaps = 75/478 (15%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
FR+++ +G NQYT SV C++ ++G VH ++++G ++ + ++++D+Y K
Sbjct: 215 FRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAK 274
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL 125
C+ E A L E + DVVSWN++I G
Sbjct: 275 CREMESARALLE-------------------------------GMEVDDVVSWNSMIVGC 303
Query: 126 IRCGYERRALELLFCMVENGTEFSEVTFXXXXX-XXXXXXXVELGKQLHGRVITLALNGD 184
+R G AL + M E + + T +++ H ++
Sbjct: 304 VRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATY 363
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+N++LV+MY K G D A L + ++ W ++V+G NG Y++ L
Sbjct: 364 KLVNNALVDMYAKRGIMDSA--------LKVFEGMIEKDVISWTALVTGNTHNGSYDEAL 415
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMY 304
K F +M D +V+SA A LLEFG+Q+H K G V +SL+ MY
Sbjct: 416 KLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMY 475
Query: 305 SKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFL 364
+K GSL+DA VIF + ++ WT +I G A +G
Sbjct: 476 TKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG------------------------- 510
Query: 365 GVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGI 424
LLE+ YF M+ VY I PG EH M+DL+GR+G ++ + + + +
Sbjct: 511 ----------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEV 560
Query: 425 SHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
+VWK+ L++ R H NIE G+ ++ L+++ P++ Y+ LSNM ++ R DEAA
Sbjct: 561 EPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAA 618
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 200/422 (47%), Gaps = 45/422 (10%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F+LF EMQ+ G PN+YTL SV + C++ L G+ +H ++ G D DV +VN +L
Sbjct: 109 AFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLA 168
Query: 62 LYLKCKAFEYAERLFE-LTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
+Y +CK AE LFE + GE + VTW M+ Y G K+++ FR+L
Sbjct: 169 MYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDL---------- 218
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
RR G + ++ TF +G Q+H ++
Sbjct: 219 -----------RR----------EGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSG 257
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
+ ++ S+L++MY KC + A +L+ + ++ +V WNSM+ G V G
Sbjct: 258 FKTNIYVQSALIDMYAKCREMESARALLEGMEVD--------DVVSWNSMIVGCVRQGLI 309
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACA-NAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
+ L F M +D T+ ++++ A + ++ H I K G+ V ++
Sbjct: 310 GEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA 369
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
L+ MY+K G +D A +F + E +V WT++++G +G +A LF M GI P+
Sbjct: 370 LVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPD 429
Query: 360 EVTFLGVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
++ V++A + + LLE G + +K + + V + S+V +Y + G L E N
Sbjct: 430 KIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNN--SLVTMYTKCGSL-EDANV 486
Query: 419 IF 420
IF
Sbjct: 487 IF 488
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 187/403 (46%), Gaps = 17/403 (4%)
Query: 36 LGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYL 95
G +H++ R + ++++L + K + A ++F+ E D TWN MI AY
Sbjct: 16 FGSCIHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 96 GAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXX 155
+ + + +FR+ P K+ +SWN +I G + G + A L + M +G + +E T
Sbjct: 71 NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130
Query: 156 XXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNL 215
+ G+Q+HG I + D + + L+ MY +C R +A + + +
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME--- 187
Query: 216 LRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLL 275
V W SM++GY NG ++ FR + E + T +V++ACA+
Sbjct: 188 ----GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSAC 243
Query: 276 EFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGC 335
G Q+H I K G + + YV S+LI MY+K ++ A + + +V W SMI GC
Sbjct: 244 RVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGC 303
Query: 336 ALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN--ACSHVGLLEEGSTYFRMMKDVYCIN 393
G +A S+F M + + ++ T ++N A S + S + ++K Y
Sbjct: 304 VRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATY 363
Query: 394 PGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLS 436
V + ++VD+Y + G ++++ +FE I W + ++
Sbjct: 364 KLVNN--ALVDMYAKRG-IMDSALKVFEGMIEKDVISWTALVT 403
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 13/215 (6%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
LF M+ G P++ +SV + L+ G+ VH +++G + + + NS++
Sbjct: 414 ALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVT 473
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAG---DVEKSLDMFRNL----PSKD 114
+Y KC + E A +F D++TW +I Y G D ++ D R + P +
Sbjct: 474 MYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPE 533
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
+ +ID R G + +LL M E + +E G++
Sbjct: 534 --HYACMIDLFGRSGDFVKVEQLLHQM---EVEPDATVWKAILAASRKHGNIENGERAAK 588
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILK 209
++ L N + L MY GR D+A+ + +
Sbjct: 589 TLMELEPN-NAVPYVQLSNMYSAAGRQDEAANVRR 622
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 191/358 (53%), Gaps = 27/358 (7%)
Query: 152 TFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKA-----SV 206
TF V G+Q+HG+V+ + + + L++MY CG A +
Sbjct: 118 TFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 207 ILKDVPL-NLLRTGNSGGI--------------------VPWNSMVSGYVWNGKYEDCLK 245
++KDV + N L G G + V W ++SGY +G+ + ++
Sbjct: 178 LVKDVNVWNALLAG-YGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIE 236
Query: 246 TFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYS 305
F+ M+ E D T+ V+SACA+ G LE G ++ +Y+ G + +++I MY+
Sbjct: 237 VFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYA 296
Query: 306 KSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLG 365
KSG++ A +F +NE NV WT++I+G A HG G +A ++F M+ G+ PN+VTF+
Sbjct: 297 KSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIA 356
Query: 366 VINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGIS 425
+++ACSHVG ++ G F M+ Y I+P +EH M+DL GRAG L E I
Sbjct: 357 ILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFK 416
Query: 426 HLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAAM 483
++W S L++ +H ++E+G+ L+++ P++ Y+LL+N+ ++ RWDE+ M
Sbjct: 417 ANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRM 474
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 181/396 (45%), Gaps = 19/396 (4%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ +++R++ A A P+ +T V K ++ G+ +H ++ G D+ V +V ++
Sbjct: 99 IAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLI 158
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS--KDVVSW 118
+Y C A ++F+ DV WN ++ Y G+++++ + +P ++ VSW
Sbjct: 159 QMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSW 218
Query: 119 NTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVIT 178
+I G + G A+E+ M+ E EVT +ELG+++ V
Sbjct: 219 TCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDH 278
Query: 179 LALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG 238
+N +N+++++MY K G KA L++ N +V W ++++G +G
Sbjct: 279 RGMNRAVSLNNAVIDMYAKSGNITKA--------LDVFECVNERNVVTWTTIIAGLATHG 330
Query: 239 KYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRIDAY 295
+ L F MV + T ++SAC++ G ++ G+++ ++ I I+ Y
Sbjct: 331 HGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHY 390
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQ 354
+I + ++G L +A + + + + N +W S+++ +H + ++
Sbjct: 391 --GCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIK- 447
Query: 355 GIVPNEV-TFLGVINACSHVGLLEEGSTYFRMMKDV 389
+ PN ++ + N S++G +E MMK +
Sbjct: 448 -LEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGI 482
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 229/470 (48%), Gaps = 42/470 (8%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
FS+F +++AKG ++++ + K CS E + +G+G+H LR+G L N+++
Sbjct: 110 FSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHF 169
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP-SKDVVSWNTI 121
Y C G + + +F +P S D V+++T+
Sbjct: 170 YCVC-------------------------------GKISDARKVFDEMPQSVDAVTFSTL 198
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
++G ++ + AL+L M ++ + T + + H I + L
Sbjct: 199 MNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGL 258
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ D + ++L+ MY K G A I D + +V WN M+ Y G E
Sbjct: 259 DLDLHLITALIGMYGKTGGISSARRIF-DCAIR-------KDVVTWNCMIDQYAKTGLLE 310
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
+C+ R M +E + T ++S+CA + GR + +++ +DA +G++L+
Sbjct: 311 ECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALV 370
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG--IVPN 359
MY+K G L+ A IF ++ + +V WT+MISG HG ++A +LF M + + PN
Sbjct: 371 DMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPN 430
Query: 360 EVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFI 419
E+TFL V+NACSH GL+ EG F+ M + Y P VEH +VDL GRAG L E I
Sbjct: 431 EITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELI 490
Query: 420 FENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLS 469
I+ ++ W++ L++CR++ N ++G+ V L ++ + P ILL+
Sbjct: 491 RNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLA 540
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 167/402 (41%), Gaps = 41/402 (10%)
Query: 40 VHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGD 99
+H +M++ G+D D V+ +L + YA +FE ++ +N MIR Y + +
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 100 VEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXX 159
E++ +F L +K G +F
Sbjct: 106 PERAFSVFNQLRAK-------------------------------GLTLDRFSFITTLKS 134
Query: 160 XXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTG 219
V +G+ LHG + + ++L+ YC CG+ A + ++P
Sbjct: 135 CSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMP------- 187
Query: 220 NSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGR 279
S V ++++++GY+ K L FR M +V++ T+ + +SA ++ G L
Sbjct: 188 QSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAE 247
Query: 280 QMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHG 339
H KIG +D ++ ++LI MY K+G + A IF +V W MI A G
Sbjct: 248 SAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTG 307
Query: 340 KGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHC 399
++ L M + + PN TF+G++++C++ G T ++++ +
Sbjct: 308 LLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILG- 366
Query: 400 TSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH 441
T++VD+Y + G L+E IF W + +S H
Sbjct: 367 TALVDMYAKVG-LLEKAVEIFNRMKDKDVKSWTAMISGYGAH 407
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 154/364 (42%), Gaps = 53/364 (14%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ LFR M+ N TL S S +L + H ++ G+D D+ L+ +++
Sbjct: 210 LALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALI 269
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
+Y K A R+F+ DVVTWN MI Y G +E+ + + R + + + ++
Sbjct: 270 GMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSS 329
Query: 121 IIDGLI-RCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
GL+ C Y SE F +G+ + +
Sbjct: 330 TFVGLLSSCAY------------------SEAAF--------------VGRTVADLLEEE 357
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
+ D + ++LV+MY K G +KA I N ++ + + W +M+SGY +G
Sbjct: 358 RIALDAILGTALVDMYAKVGLLEKAVEI-----FNRMKDKD---VKSWTAMISGYGAHGL 409
Query: 240 YEDCLKTFRSMVHELAIVDIRTVT--TVISACANAGLLE-----FGRQMHAYIQKIGHRI 292
+ + F M E V +T V++AC++ GL+ F R + AY ++
Sbjct: 410 AREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAY--SFTPKV 467
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGM 351
+ Y ++ + ++G L++A+ + R + + W ++++ C ++G S+ +
Sbjct: 468 EHY--GCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRL 525
Query: 352 LNQG 355
G
Sbjct: 526 AEMG 529
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 180/316 (56%), Gaps = 9/316 (2%)
Query: 166 VELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIV 225
V LG+ +H VI ++ +SL+ +Y CG A + +P +V
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP--------EKDLV 55
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI 285
WNS+++G+ NGK E+ L + M + D T+ +++SACA G L G+++H Y+
Sbjct: 56 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 115
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQAS 345
K+G + + + L+ +Y++ G +++A +F ++ + N WTS+I G A++G GK+A
Sbjct: 116 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 175
Query: 346 SLFEGMLN-QGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVD 404
LF+ M + +G++P E+TF+G++ ACSH G+++EG YFR M++ Y I P +EH MVD
Sbjct: 176 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 235
Query: 405 LYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEA 464
L RAG + + +I + +W++ L +C +H + ++ ++ +LQ+ P+
Sbjct: 236 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGD 295
Query: 465 YILLSNMCTSNHRWDE 480
Y+LLSNM S RW +
Sbjct: 296 YVLLSNMYASEQRWSD 311
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 147/318 (46%), Gaps = 48/318 (15%)
Query: 33 NLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIR 92
+++LG+ +H+ ++R+G + + + NS+L LY C
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC-------------------------- 36
Query: 93 AYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVT 152
GDV + +F +P KD+V+WN++I+G G AL L M G + T
Sbjct: 37 -----GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 91
Query: 153 FXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVP 212
+ LGK++H +I + L + ++ L+++Y +CGR ++A + +
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE-- 149
Query: 213 LNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIR-TVTTVISACAN 271
+ NS V W S++ G NG ++ ++ F+ M ++ T ++ AC++
Sbjct: 150 ---MVDKNS---VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 203
Query: 272 AGLL----EFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVF 326
G++ E+ R+M KI RI+ + ++ + +++G + A+ + + +PNV
Sbjct: 204 CGMVKEGFEYFRRMREEY-KIEPRIEHF--GCMVDLLARAGQVKKAYEYIKSMPMQPNVV 260
Query: 327 LWTSMISGCALHGKGKQA 344
+W +++ C +HG A
Sbjct: 261 IWRTLLGACTVHGDSDLA 278
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+L+ EM +KG P+ +T+ S+ C+ L LGK VH +M++ G+ ++ N +LDL
Sbjct: 74 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 133
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKD-----VVS 117
Y +C E A+ LF+ + + V+W +I G ++++++F+ + S + ++
Sbjct: 134 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 193
Query: 118 WNTIIDGLIRCGYERRALELLFCMVE 143
+ I+ CG + E M E
Sbjct: 194 FVGILYACSHCGMVKEGFEYFRRMRE 219
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 218/476 (45%), Gaps = 43/476 (9%)
Query: 9 MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKA 68
M+ G PN YT + K KGVH +L+ D + +L LY +
Sbjct: 238 MRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQL-- 295
Query: 69 FEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRC 128
GD+ + +F +P DVV W+ +I +
Sbjct: 296 -----------------------------GDMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326
Query: 129 GYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFIN 188
G+ A++L M E +E T LG+QLHG V+ + + D +++
Sbjct: 327 GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS 386
Query: 189 SSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFR 248
++L+++Y KC + D A + ++ +S V WN+++ GY G+ FR
Sbjct: 387 NALIDVYAKCEKMDTAVKLFAEL--------SSKNEVSWNTVIVGYENLGEGGKAFSMFR 438
Query: 249 SMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSG 308
+ V T ++ + ACA+ ++ G Q+H K + V +SLI MY+K G
Sbjct: 439 EALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCG 498
Query: 309 SLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
+ A +F ++ +V W ++ISG + HG G+QA + + M ++ PN +TFLGV++
Sbjct: 499 DIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLS 558
Query: 369 ACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLT 428
CS+ GL+++G F M + I P +EH T MV L GR+G L + I GI +
Sbjct: 559 GCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLI--EGIPYEP 616
Query: 429 SV--WKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
SV W++ LS+ N E + +E +L++ P D Y+L+SNM +W A
Sbjct: 617 SVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVA 672
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 192/443 (43%), Gaps = 22/443 (4%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+LF EM + + TL+ + C Q G+++ + R G + + + S L L
Sbjct: 104 LNLFDEMPERNNV-SFVTLAQGYAC-------QDPIGLYSRLHREGHELNPHVFTSFLKL 155
Query: 63 YLKCKAFEYA----ERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSW 118
++ E + +L + + +I AY G V+ + +F + KD+V W
Sbjct: 156 FVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVW 215
Query: 119 NTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVIT 178
I+ + GY +L+LL CM G + TF + K +HG+++
Sbjct: 216 AGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILK 275
Query: 179 LALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG 238
D + L+++Y + G A + ++P N +VPW+ M++ + NG
Sbjct: 276 TCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN--------DVVPWSFMIARFCQNG 327
Query: 239 KYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
+ + F M + + T++++++ CA G Q+H + K+G +D YV +
Sbjct: 328 FCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN 387
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
+LI +Y+K +D A +F +++ N W ++I G G+G +A S+F L +
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSV 447
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
EVTF + AC+ + ++ G + V S++D+Y + G I+
Sbjct: 448 TEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK-VAVSNSLIDMYAKCG-DIKFAQS 505
Query: 419 IFENGISHLTSVWKSFLSSCRLH 441
+F + + W + +S H
Sbjct: 506 VFNEMETIDVASWNALISGYSTH 528
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 12/289 (4%)
Query: 83 DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMV 142
D+ NI++ AY+ AG + +L++F +P ++ VS+ T+ G C + + L +
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA-C---QDPIGLYSRLH 138
Query: 143 ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTD 202
G E + F E+ LH ++ L + + F+ ++L+ Y CG D
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 203 KASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTV 262
A + + + IV W +VS YV NG +ED LK M + + T
Sbjct: 199 SARTVFEGILCK--------DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTF 250
Query: 263 TTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE 322
T + A G +F + +H I K + +D VG L+ +Y++ G + DA+ +F ++ +
Sbjct: 251 DTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPK 310
Query: 323 PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACS 371
+V W+ MI+ +G +A LF M +VPNE T ++N C+
Sbjct: 311 NDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 15/243 (6%)
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
K +H ++ D F + L+ Y K G A LNL V +
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDA--------LNLFDEMPERNNVSFV 119
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
++ GY +D + + + E ++ T+ + + E +H+ I K+
Sbjct: 120 TLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKL 175
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
G+ +A+VG++LI+ YS GS+D A +F I ++ +W ++S +G + + L
Sbjct: 176 GYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLL 235
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLE-EGSTYFRMMKDVYCINPGVEHCTSMVDLYG 407
M G +PN TF + A +G + + +++K Y ++P V ++ LY
Sbjct: 236 SCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYT 293
Query: 408 RAG 410
+ G
Sbjct: 294 QLG 296
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
FS+FRE + T SS C++ ++ LG VH ++ V + NS++D+
Sbjct: 434 FSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDM 493
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKD 114
Y KC ++A+ +F DV +WN +I Y G ++L + + +D
Sbjct: 494 YAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD 545
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 236/501 (47%), Gaps = 60/501 (11%)
Query: 11 AKGACPNQYTLSSVFKCCSAEKNLQLG---KGVHAWMLRNGVDADVVLVNSILDLYLKCK 67
+ A P+ ++S V K S + LG + VH +++R G D+DV + N ++ Y KC
Sbjct: 122 SDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCD 181
Query: 68 AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN--TIIDGL 125
E A ++F+ E DVV+WN MI Y +G E M++ + + N T+I
Sbjct: 182 NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVF 241
Query: 126 IRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDN 185
CG ++ +L+F G ++H ++I + D
Sbjct: 242 QACG---QSSDLIF-----------------------------GLEVHKKMIENHIQMDL 269
Query: 186 FINSSLVEMYCKCGRTDKASVILKDV-----------------------PLNLLRTGNSG 222
+ ++++ Y KCG D A + ++ + L S
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 223 GIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMH 282
G+ WN+M+SG + N +E+ + +FR M+ + + T+++++ + + L+ G+++H
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 283 AYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGK 342
A+ + G + YV +S+I Y+K G L A +F + ++ WT++I+ A+HG
Sbjct: 390 AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSD 449
Query: 343 QASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSM 402
A SLF+ M G P++VT V++A +H G + F M Y I PGVEH M
Sbjct: 450 SACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM 509
Query: 403 VDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDP 462
V + RAG L + FI + I + VW + L+ + ++E+ ++ + L ++ P +
Sbjct: 510 VSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENT 569
Query: 463 EAYILLSNMCTSNHRWDEAAM 483
Y +++N+ T RW+EA M
Sbjct: 570 GNYTIMANLYTQAGRWEEAEM 590
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 19/252 (7%)
Query: 171 QLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSM 230
QLH R++ ++ DNF+ S L+ Y + R +A + ++ + +N++
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVR--------NAFSYNAL 94
Query: 231 VSGYVWNGKYEDCLKTFRSMV------HELAIVD---IRTVTTVISACANAGLLEFGRQM 281
+ Y Y D F S + + A D I V +S C + L RQ+
Sbjct: 95 LIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQV 154
Query: 282 HAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKG 341
H ++ + G D +VG+ +I Y+K +++ A +F +++E +V W SMISG + G
Sbjct: 155 HGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSF 214
Query: 342 KQASSLFEGMLN-QGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCT 400
+ +++ ML PN VT + V AC L G + M + + I + C
Sbjct: 215 EDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCN 273
Query: 401 SMVDLYGRAGCL 412
+++ Y + G L
Sbjct: 274 AVIGFYAKCGSL 285
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V + FREM G+ PN TLSS+ + NL+ GK +HA+ +RNG D ++ + SI+D
Sbjct: 350 VINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIID 409
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL----PSKDVVS 117
Y K A+R+F+ + ++ W +I AY GD + + +F + D V+
Sbjct: 410 NYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVT 469
Query: 118 WNTIIDGLIRCGYERRALELLFCM-----VENGTE 147
++ G A + M +E G E
Sbjct: 470 LTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVE 504
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 147/544 (27%), Positives = 253/544 (46%), Gaps = 79/544 (14%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF M +G P+ TL ++ C + G+ VH ++G++ D + N+++ Y
Sbjct: 138 LFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYS 197
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV-VSWNTIID 123
KC AE LF + V+WN MI AY +G E+++ +F+N+ K+V +S TII+
Sbjct: 198 KCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIIN 257
Query: 124 GL-------------IRCG--------------YER----RALELLF------------- 139
L ++CG Y R + E L+
Sbjct: 258 LLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTS 317
Query: 140 ---CMVENG-TEFSEVTFXXXXXXXXXXXXVELGKQLHGRV------ITLALNG------ 183
C E G + + V F V L LHG I ++L+G
Sbjct: 318 IVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSG 377
Query: 184 ---DNFINSSLVEMYCKCGRTDKASVI---LKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
+ + L+ MY K + + L++ PL + WNS++SG V +
Sbjct: 378 LCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPL-----------ISWNSVISGCVQS 426
Query: 238 GKYEDCLKTFRSMVHELAIV-DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
G+ + F M+ ++ D T+ ++++ C+ L G+++H Y + + +V
Sbjct: 427 GRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFV 486
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
++LI MY+K G+ A +F+ I P W SMISG +L G +A S + M +G+
Sbjct: 487 CTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGL 546
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
P+E+TFLGV++AC+H G ++EG FR M + I+P ++H MV L GRA E
Sbjct: 547 KPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEAL 606
Query: 417 NFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNH 476
I++ I ++VW + LS+C +H+ +E+G++V+ + + + Y+L+SN+ +
Sbjct: 607 YLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEA 666
Query: 477 RWDE 480
WD+
Sbjct: 667 MWDD 670
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 179/444 (40%), Gaps = 63/444 (14%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKN---LQLGKGVHAWMLRNGVDADVVLVNSIL 60
++FR++ PN +T+S + + N LQ+ + V + ++G+D V + S+L
Sbjct: 34 TIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQ-VQTHLTKSGLDRFVYVKTSLL 92
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
+LYLK A+ LF+ +P +D V WN
Sbjct: 93 NLYLKKGCVTSAQMLFD-------------------------------EMPERDTVVWNA 121
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+I G R GYE A +L M++ G S T V G+ +HG
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
L D+ + ++L+ Y KC A V+ +++ V WN+M+ Y +G
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREM--------KDKSTVSWNTMIGAYSQSGLQ 233
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
E+ + F++M + + T+ ++SA + +H + K G D V +SL
Sbjct: 234 EEAITVFKNMFEKNVEISPVTIINLLSAHVSH------EPLHCLVVKCGMVNDISVVTSL 287
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+ YS+ G L A ++ + ++ TS++S A G A F + +
Sbjct: 288 VCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDA 347
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTS------MVDLYGRAGCLIE 414
V +G+++ C ++ G M Y I G+ CT ++ +Y + +E
Sbjct: 348 VALVGILHGCKKSSHIDIG-----MSLHGYAIKSGL--CTKTLVVNGLITMYSKFD-DVE 399
Query: 415 TKNFIFENGISHLTSVWKSFLSSC 438
T F+FE W S +S C
Sbjct: 400 TVLFLFEQLQETPLISWNSVISGC 423
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 3 FSLFREMQAKGAC-PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F +F +M G P+ T++S+ CS L LGK +H + LRN + + + +++D
Sbjct: 433 FEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALID 492
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK 113
+Y KC AE +F+ TWN MI Y +G ++L + + K
Sbjct: 493 MYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREK 544
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 229/480 (47%), Gaps = 50/480 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKC---CSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL- 60
++R M P++YTLSSVFK S EK Q G+ + G++ V V S L
Sbjct: 152 MYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVIL---GLEVSNVFVGSALV 208
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
D+Y+K F T E +V LD + KDVV
Sbjct: 209 DMYVK----------FGKTREAKLV------------------LD---RVEEKDVVLITA 237
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+I G + G + A++ M+ + +E T+ + GK +HG ++
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG 297
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
+SL+ MY +C L D L + + V W S++SG V NG+
Sbjct: 298 FESALASQTSLLTMYLRCS--------LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGRE 349
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
E L FR M+ + + T+++ + C+N + E GRQ+H + K G D Y GS L
Sbjct: 350 EMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGL 409
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
I +Y K G D A ++F ++E +V +MI A +G G++A LFE M+N G+ PN+
Sbjct: 410 IDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPND 469
Query: 361 VTFLGVINACSHVGLLEEGSTYF-RMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFI 419
VT L V+ AC++ L+EEG F KD + +H MVDL GRAG L E +
Sbjct: 470 VTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTN--DHYACMVDLLGRAGRLEEAEMLT 527
Query: 420 FENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
E I+ +W++ LS+C++H+ +EM + ++ +L++ P D IL+SN+ S +W+
Sbjct: 528 TE-VINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWN 586
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 178/394 (45%), Gaps = 42/394 (10%)
Query: 19 YTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFEL 78
+ S + + C E+++ K + A ML++G A++ + ++D LKC
Sbjct: 66 HNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKC------------ 112
Query: 79 TGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELL 138
GD++ + +F + + +V+WN++I LI+ + A+E+
Sbjct: 113 -------------------GDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMY 153
Query: 139 FCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDN-FINSSLVEMYCK 197
M+ N E T + ++ HG + L L N F+ S+LV+MY K
Sbjct: 154 RLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVK 213
Query: 198 CGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIV 257
G+T +A ++L V +V +++ GY G+ + +K F+SM+ E
Sbjct: 214 FGKTREAKLVLDRV--------EEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQP 265
Query: 258 DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF 317
+ T +V+ +C N + G+ +H + K G +SL+ MY + +DD+ +F
Sbjct: 266 NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVF 325
Query: 318 RQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLE 377
+ I PN WTS+ISG +G+ + A F M+ I PN T + CS++ + E
Sbjct: 326 KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFE 385
Query: 378 EGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGC 411
EG ++ Y + + ++DLYG+ GC
Sbjct: 386 EGRQIHGIVTK-YGFDRDKYAGSGLIDLYGKCGC 418
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%)
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
GS L+ K G +D A +F ++E ++ W S+I+ H + K+A ++ M+ +
Sbjct: 102 GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNV 161
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
+P+E T V A S + L +E + + V +++VD+Y + G E K
Sbjct: 162 LPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAK 221
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 244/510 (47%), Gaps = 68/510 (13%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F +F + + G+ N T++SV C +++ G +H +++G + +V + S++ +
Sbjct: 117 FRMFGDARVSGSGMNSVTVASVLGGCG---DIEGGMQLHCLAMKSGFEMEVYVGTSLVSM 173
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y +C + A R+FE +P K VV++N I
Sbjct: 174 YSRCGEWVLAARMFE-------------------------------KVPHKSVVTYNAFI 202
Query: 123 DGLIRCGYERRALELLFCMVE-NGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
GL+ G + M + + E ++VTF ++ G+QLHG V+
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVI---LKDV---------------------PLNLLR 217
+ + ++L++MY KC A ++ LKD + L
Sbjct: 263 QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 218 TGNSGGIVP----WNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAG 273
+S G+ P WNS++SG+ GK + K F M+ + + ++ +T+++SAC++
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIW 382
Query: 274 LLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEP---NVFLWTS 330
L+ G+++H ++ K D +V +SLI MY K G A IF + EP + W
Sbjct: 383 TLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRF-EPKPKDPVFWNV 441
Query: 331 MISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVY 390
MISG HG+ + A +FE + + + P+ TF V++ACSH G +E+GS FR+M++ Y
Sbjct: 442 MISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEY 501
Query: 391 CINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWV 450
P EH M+DL GR+G L E K I + +SV+ S L SCR H + +G+
Sbjct: 502 GYKPSTEHIGCMIDLLGRSGRLREAKEVI-DQMSEPSSSVYSSLLGSCRQHLDPVLGEEA 560
Query: 451 SEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
+ L ++ P +P +++LS++ + RW++
Sbjct: 561 AMKLAELEPENPAPFVILSSIYAALERWED 590
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 183/391 (46%), Gaps = 47/391 (12%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
PN++T + K C+ ++ G+ +HA +++ G DV +++ +Y+K K
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVK-------- 80
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
V +L + +P + + S N + GL+ G+ R A
Sbjct: 81 -----------------------QVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAF 117
Query: 136 ELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMY 195
+ +G+ + VT +E G QLH + + ++ +SLV MY
Sbjct: 118 RMFGDARVSGSGMNSVTVASVLGGCGD---IEGGMQLHCLAMKSGFEMEVYVGTSLVSMY 174
Query: 196 CKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELA 255
+CG A+ + + VP +V +N+ +SG + NG F +++ + +
Sbjct: 175 SRCGEWVLAARMFEKVP--------HKSVVTYNAFISGLMENGVMNLVPSVF-NLMRKFS 225
Query: 256 IVDIRTVTTV--ISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDA 313
+ VT V I+ACA+ L++GRQ+H + K + + VG++LI MYSK A
Sbjct: 226 SEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSA 285
Query: 314 WVIFRQINEP-NVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSH 372
+++F ++ + N+ W S+ISG ++G+ + A LFE + ++G+ P+ T+ +I+ S
Sbjct: 286 YIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQ 345
Query: 373 VGLLEEGSTYFRMMKDVYCINPGVEHCTSMV 403
+G + E +F M V + P ++ TS++
Sbjct: 346 LGKVIEAFKFFERMLSVVMV-PSLKCLTSLL 375
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 168/343 (48%), Gaps = 14/343 (4%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
VF+L R+ ++ PN T + C++ NLQ G+ +H +++ + ++ +++D
Sbjct: 217 VFNLMRKFSSEE--PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALID 274
Query: 62 LYLKCKAFEYAERLF-ELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DVV 116
+Y KC+ ++ A +F EL ++++WN +I + G E ++++F L S+ D
Sbjct: 275 MYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSA 334
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
+WN++I G + G A + M+ S ++ GK++HG V
Sbjct: 335 TWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHV 394
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
I A D F+ +SL++MY KCG + A I V WN M+SGY
Sbjct: 395 IKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRF------EPKPKDPVFWNVMISGYGK 448
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ-KIGHRIDAY 295
+G+ E ++ F + E + T T V+SAC++ G +E G Q+ +Q + G++
Sbjct: 449 HGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTE 508
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALH 338
+I + +SG L +A + Q++EP+ +++S++ C H
Sbjct: 509 HIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSLLGSCRQH 551
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 123/268 (45%), Gaps = 25/268 (9%)
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
G+ LH +V+ D F ++LV MY K + A +L ++P GI N
Sbjct: 50 GRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMP--------ERGIASVN 101
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
+ VSG + NG D + F + ++ TV +V+ C G +E G Q+H K
Sbjct: 102 AAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKS 158
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
G ++ YVG+SL+ MYS+ G A +F ++ +V + + ISG +G S+F
Sbjct: 159 GFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVF 218
Query: 349 EGMLN-QGIVPNEVTFLGVINACSHVGLLEEGSTYFRM-MKDVYCINPGVEHCTSMVDLY 406
M PN+VTF+ I AC+ + L+ G + MK + V T+++D+Y
Sbjct: 219 NLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMV--GTALIDMY 276
Query: 407 GRAGC----------LIETKNFIFENGI 424
+ C L +T+N I N +
Sbjct: 277 SKCRCWKSAYIVFTELKDTRNLISWNSV 304
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 4/150 (2%)
Query: 261 TVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQI 320
T ++ +CA G + GR +HA + K G +D + ++L+ MY K + DA + ++
Sbjct: 33 TFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEM 92
Query: 321 NEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGS 380
E + + +SG +G + A +F G N VT V+ C + EG
Sbjct: 93 PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI----EGG 148
Query: 381 TYFRMMKDVYCINPGVEHCTSMVDLYGRAG 410
+ V TS+V +Y R G
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCG 178
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 229/480 (47%), Gaps = 42/480 (8%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
FR M G P Q+T S V CS + LGK +HA ++ + AD+ L N++LD+Y
Sbjct: 287 FFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYC 346
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
C GD+ ++ +F + + ++VSWN+II G
Sbjct: 347 SC-------------------------------GDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 125 LIRCGYERRALELLFCMVENGT-EFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
G+ +A+ + ++ T E TF GK LHG+V L
Sbjct: 376 CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYER 435
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
F+ ++L+ MY K + A + ++++ + +V W M+ G+ G E
Sbjct: 436 SVFVGTTLLSMYFKNREAESAQKVF-----DVMKERD---VVLWTEMIVGHSRLGNSELA 487
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
++ F M E D ++++VI AC++ +L G H + G V +L+ M
Sbjct: 488 VQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDM 547
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
Y K+G + A IF + P++ W SM+ + HG ++A S FE +L G +P+ VT+
Sbjct: 548 YGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTY 607
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
L ++ ACSH G +G + MK+ I G +H + MV+L +AG + E I ++
Sbjct: 608 LSLLAACSHRGSTLQGKFLWNQMKE-QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSP 666
Query: 424 I-SHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
++ +W++ LS+C +N+++G + +E +L++ P D +ILLSN+ N RW++ A
Sbjct: 667 PGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVA 726
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 210/479 (43%), Gaps = 47/479 (9%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F L M + PN T +S+ + C+ +++ +G +++ +++ G +VV+ S+L
Sbjct: 183 AFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLG 242
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y C GD+E + +F + ++D V+WNT+
Sbjct: 243 MYSSC-------------------------------GDLESARRIFDCVNNRDAVAWNTM 271
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
I G ++ L M+ +G + ++ T+ LGK +H R+I
Sbjct: 272 IVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDS 331
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
D ++++L++MYC CG +A + + ++ +V WNS++SG NG E
Sbjct: 332 LADLPLDNALLDMYCSCGDMREAFYVFGRI--------HNPNLVSWNSIISGCSENGFGE 383
Query: 242 DCLKTFRSMVH-ELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
+ +R ++ D T + ISA A G+ +H + K+G+ +VG++L
Sbjct: 384 QAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTL 443
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+ MY K+ + A +F + E +V LWT MI G + G + A F M + +
Sbjct: 444 LSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDG 503
Query: 361 VTFLGVINACSHVGLLEEGSTY--FRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
+ VI ACS + +L +G + + C+ + C ++VD+YG+ G ET
Sbjct: 504 FSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCV---MSVCGALVDMYGKNG-KYETAET 559
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHR 477
IF + W S L + H +E E +L+ P+A LS + +HR
Sbjct: 560 IFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFM-PDAVTYLSLLAACSHR 617
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 180/416 (43%), Gaps = 41/416 (9%)
Query: 57 NSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVV 116
N+++ +Y++C + E A ++F+ + ++VT G V + + M +L S+
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTL-------FGLSAVFEYVSMGSSLHSQ--- 75
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
+I+ G + +++F M N S V ++ +Q+H V
Sbjct: 76 --------IIKLG----SFQMIFFMPLNEIASSVVEL---TRKCVSITVLKRARQIHALV 120
Query: 177 ITL---ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSG 233
+T A + N++L+ MY +CG ++A + +P +V +N++ S
Sbjct: 121 LTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP--------HRNVVSYNALYSA 172
Query: 234 YVWNGKYED-CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
Y N + M E + T T+++ CA + G +++ I K+G+
Sbjct: 173 YSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSD 232
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGML 352
+ V +S++ MYS G L+ A IF +N + W +MI G + K + F ML
Sbjct: 233 NVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 353 NQGIVPNEVTFLGVINACSHVGLLEEGS-TYFRMMKDVYCINPGVEHCTSMVDLYGRAGC 411
G+ P + T+ V+N CS +G G + R++ + +++ +++D+Y G
Sbjct: 293 MSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDN--ALLDMYCSCGD 350
Query: 412 LIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYIL 467
+ E ++F + W S +S C + E + LL+++ P+ Y
Sbjct: 351 MREAF-YVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTF 405
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ F EM + + ++LSSV CS L+ G+ H +R G D + + +++
Sbjct: 486 LAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALV 545
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL 110
D+Y K +E AE +F L D+ WN M+ AY G VEK+L F +
Sbjct: 546 DMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQI 595
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 133/298 (44%), Gaps = 19/298 (6%)
Query: 186 FINSSLVEMYCKCGRTDKASVILKDVP-LNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ N++L+ MY +C ++A + +P N++ + + SM S + +
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSL-----HSQII 77
Query: 245 K--TFRSMVHELAIVDI-RTVTTVISACANAGLLEFGRQMHAYIQKIGHRI---DAYVGS 298
K +F+ M+ + + +I +V + C + +L+ RQ+HA + G Y +
Sbjct: 78 KLGSFQ-MIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANN 136
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGK-GKQASSLFEGMLNQGIV 357
+LI MY + GSL+ A +F ++ NV + ++ S + + A L M + +
Sbjct: 137 NLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK 196
Query: 358 PNEVTFLGVINACSHVGLLEEGSTY-FRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
PN TF ++ C+ + + GS+ +++K Y N V+ TS++ +Y G L E+
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQ--TSVLGMYSSCGDL-ESA 253
Query: 417 NFIFENGISHLTSVWKSFLSSCRLHKNIEMG-KWVSEMLLQVAPSDPEAYILLSNMCT 473
IF+ + W + + + IE G + ML+ Y ++ N C+
Sbjct: 254 RRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCS 311
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 215/475 (45%), Gaps = 61/475 (12%)
Query: 33 NLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK--CKAFEYAERLFELTGEGDVVTWNIM 90
NL K +H +LR G+D ++ ++ K YA R+ E + W +
Sbjct: 61 NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAV 120
Query: 91 IRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIR-CGYERRALELLFCMVENGTEFS 149
IR Y G ++++ M+ + +++ + L++ CG +
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMK----------------- 163
Query: 150 EVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILK 209
+ LG+Q H + L ++ +++++MY KC D A +
Sbjct: 164 ---------------DLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFD 208
Query: 210 DVP-----------LNLLRTGN------------SGGIVPWNSMVSGYVWNGKYEDCLKT 246
++P R GN + +V W +MV+G+ N K ++ L+
Sbjct: 209 EMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEY 268
Query: 247 FRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV--GSSLIHMY 304
F M D TV ISACA G ++ + QK G+ +V GS+LI MY
Sbjct: 269 FDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMY 328
Query: 305 SKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG-IVPNEVTF 363
SK G++++A +F +N NVF ++SMI G A HG+ ++A LF M+ Q I PN VTF
Sbjct: 329 SKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTF 388
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
+G + ACSH GL+++G F M + + P +H T MVDL GR G L E I
Sbjct: 389 VGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMS 448
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRW 478
+ VW + L +CR+H N E+ + +E L ++ P YILLSN+ S W
Sbjct: 449 VEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDW 503
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 186/368 (50%), Gaps = 31/368 (8%)
Query: 9 MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKA 68
M+ + P +T S++ K C K+L LG+ HA R V + N+++D+Y+KC++
Sbjct: 140 MRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCES 199
Query: 69 FEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRC 128
+ A ++F+ E DV++W +I AY G++E + ++F +LP+KD+V+W ++ G +
Sbjct: 200 IDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQN 259
Query: 129 GYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG-RVITLALNGDN-- 185
+ ALE M ++G EVT +LG + R + +A
Sbjct: 260 AKPQEALEYFDRMEKSGIRADEVTV-----AGYISACAQLGASKYADRAVQIAQKSGYSP 314
Query: 186 ----FINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
I S+L++MY KCG ++A +N+ + N+ + ++SM+ G +G+ +
Sbjct: 315 SDHVVIGSALIDMYSKCGNVEEA--------VNVFMSMNNKNVFTYSSMILGLATHGRAQ 366
Query: 242 DCLKTFRSMVHELAIVDIRTVTTV--ISACANAGLLEFGRQM-HAYIQKIGHRIDAYVGS 298
+ L F MV + I TVT V + AC+++GL++ GRQ+ + Q G + +
Sbjct: 367 EALHLFHYMVTQTEI-KPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYT 425
Query: 299 SLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGK----QASSLFEGMLN 353
++ + ++G L +A + + ++ EP+ +W +++ C +H + A LFE L
Sbjct: 426 CMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFE--LE 483
Query: 354 QGIVPNEV 361
I+ N +
Sbjct: 484 PDIIGNYI 491
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 262 VTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN 321
V+++IS + L +Q+H ++ + G Y+ + LI +K G D + R++
Sbjct: 49 VSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYA--RRVI 106
Query: 322 EP----NVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLE 377
EP N FLWT++I G A+ GK +A +++ M + I P TF ++ AC + L
Sbjct: 107 EPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLN 166
Query: 378 EGSTY----FRMMKDVYCINPGVEHCTSMVDLY 406
G + FR+ +C V +M+D+Y
Sbjct: 167 LGRQFHAQTFRLRG--FCF---VYVGNTMIDMY 194
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 202/406 (49%), Gaps = 15/406 (3%)
Query: 83 DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMV 142
D T N ++ +Y+ ++ + +F + +VVSW ++I G G + AL + M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 143 EN-GTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRT 201
E+ +E TF +GK +H R+ L + ++SSLV+MY KC
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 202 DKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRT 261
+ A + + G +V W SM++ Y N + + ++ FRS A+ R
Sbjct: 183 ETARRVFDSM------IGYGRNVVSWTSMITAYAQNARGHEAIELFRSF--NAALTSDRA 234
Query: 262 ----VTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF 317
+ +VISAC++ G L++G+ H + + G+ + V +SL+ MY+K GSL A IF
Sbjct: 235 NQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIF 294
Query: 318 RQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLE 377
+I +V +TSMI A HG G+ A LF+ M+ I PN VT LGV++ACSH GL+
Sbjct: 295 LRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVN 354
Query: 378 EGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF--IFENGISHLTSVWKSFL 435
EG Y +M + Y + P H T +VD+ GR G + E E G +W + L
Sbjct: 355 EGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALL 414
Query: 436 SSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
S+ RLH +E+ S+ L+Q AYI LSN + W+++
Sbjct: 415 SAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDS 460
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 163/346 (47%), Gaps = 44/346 (12%)
Query: 2 VFSLFREM-QAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
S+F++M + + PN+YT +SVFK CSA ++GK +HA + +G+ ++V+ +S++
Sbjct: 114 ALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLV 173
Query: 61 DLYLKCKAFEYAERLFE-LTGEG-DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSW 118
D+Y KC E A R+F+ + G G +VV+W MI AY +++++FR S+
Sbjct: 174 DMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFR--------SF 225
Query: 119 NTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVIT 178
N + RA + + V + ++ GK HG V
Sbjct: 226 NAALTS-------DRANQFMLASVISACS--------------SLGRLQWGKVAHGLVTR 264
Query: 179 LALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG 238
+ + +SL++MY KCG A I + + ++ + SM+ +G
Sbjct: 265 GGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCH--------SVISYTSMIMAKAKHG 316
Query: 239 KYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQ-MHAYIQKIGHRIDAYVG 297
E +K F MV + T+ V+ AC+++GL+ G + + +K G D+
Sbjct: 317 LGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHY 376
Query: 298 SSLIHMYSKSGSLDDAWVIFRQIN---EPNVFLWTSMISGCALHGK 340
+ ++ M + G +D+A+ + + I E LW +++S LHG+
Sbjct: 377 TCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGR 422
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
LKT +VH+L S NA F +H K+G D + + L+
Sbjct: 29 LKTKAFLVHKL------------SESTNAA---FTNLLHTLTLKLGFASDTFTVNHLVIS 73
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGML-NQGIVPNEVT 362
Y K ++ A +F ++ EPNV WTS+ISG GK + A S+F+ M ++ + PNE T
Sbjct: 74 YVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYT 133
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
F V ACS + G + ++ + + +S+VD+YG+ +ET +F++
Sbjct: 134 FASVFKACSALAESRIGKNIHARL-EISGLRRNIVVSSSLVDMYGKCND-VETARRVFDS 191
Query: 423 GISH------LTSVWKSFLSSCRLHKNIEM 446
I + TS+ ++ + R H+ IE+
Sbjct: 192 MIGYGRNVVSWTSMITAYAQNARGHEAIEL 221
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 225/474 (47%), Gaps = 62/474 (13%)
Query: 38 KGVHAWMLRNGVDADVVLVNSILDLYL--KCKAFEYAERLFELTGEGDVVTWNIMIRAYL 95
+ +HA + +G D LV + K +YA ++ + + + + N MIRA+
Sbjct: 23 RQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHC 82
Query: 96 GAGDVEKSLDMFRNLPS--KDVVSWNTIIDGLIRC--GYERRALELLFCMVENGTEFSEV 151
+ EKS D +R + S D+ N ++ L++ G R
Sbjct: 83 KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMR------------------ 124
Query: 152 TFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDV 211
E G Q+HG I + D + + L+ +Y + G D + +
Sbjct: 125 ---------------ETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSI 169
Query: 212 PLN--LLRTG------NSGGIV---------------PWNSMVSGYVWNGKYEDCLKTFR 248
P + RT G +V WN+M+SGY G+ + L F
Sbjct: 170 PCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFH 229
Query: 249 SMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSG 308
M E V+ + +V+SAC G L+ GR H+YI++ +I + ++L+ +Y+K G
Sbjct: 230 LMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCG 289
Query: 309 SLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
++ A +F + E NV+ W+S ++G A++G G++ LF M G+ PN VTF+ V+
Sbjct: 290 DMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLR 349
Query: 369 ACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLT 428
CS VG ++EG +F M++ + I P +EH +VDLY RAG L + + I + +
Sbjct: 350 GCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHA 409
Query: 429 SVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
+VW S L + R++KN+E+G S+ +L++ ++ AY+LLSN+ ++ WD +
Sbjct: 410 AVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVS 463
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 155/342 (45%), Gaps = 16/342 (4%)
Query: 3 FSLFREMQAKGA--CPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
F +R + + G P+ YT++ + + C+ + + G VH +R G D D + ++
Sbjct: 91 FDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLI 150
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
LY + + ++F D V M+ A GDV + +F +P +D ++WN
Sbjct: 151 SLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNA 210
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+I G + G R AL + M G + + V ++ G+ H +
Sbjct: 211 MISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNK 270
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
+ + ++LV++Y KCG +KA + + + W+S ++G NG
Sbjct: 271 IKITVRLATTLVDLYAKCGDMEKA--------MEVFWGMEEKNVYTWSSALNGLAMNGFG 322
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRIDAYVG 297
E CL+ F M + + T +V+ C+ G ++ G++ ++ I +++ Y
Sbjct: 323 EKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHY-- 380
Query: 298 SSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
L+ +Y+++G L+DA I +Q+ +P+ +W+S++ ++
Sbjct: 381 GCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMY 422
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 218/468 (46%), Gaps = 62/468 (13%)
Query: 38 KGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGA 97
K +HA LR GVD L+ +L + YA +LF+ +N +I+AY
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYY-- 58
Query: 98 GDVEKSLDMFRNLPSKDVVSWNTI-IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXX 156
+ P + +V +N + DGL S TF
Sbjct: 59 ---------VHHQPHESIVLYNLLSFDGL---------------------RPSHHTFNFI 88
Query: 157 XXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCK-----CGRTDKASVILKDV 211
+ LH + D+F ++L+ Y K C R + +DV
Sbjct: 89 FAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDV 148
Query: 212 PL-NLLRTG-----------------NSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHE 253
P+ N + TG + W +++SG+ NG Y + LK F M +
Sbjct: 149 PVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKD 208
Query: 254 LAIVDIR-TVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDD 312
++ TV +V+ ACAN G LE GR++ Y ++ G + YV ++ I MYSK G +D
Sbjct: 209 KSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDV 268
Query: 313 AWVIFRQI-NEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACS 371
A +F ++ N+ N+ W SMI A HGK +A +LF ML +G P+ VTF+G++ AC
Sbjct: 269 AKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACV 328
Query: 372 HVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVW 431
H G++ +G F+ M++V+ I+P +EH M+DL GR G L E + I + VW
Sbjct: 329 HGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVW 388
Query: 432 KSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
+ L +C H N+E+ + SE L ++ P++P +++SN+ +N +WD
Sbjct: 389 GTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWD 436
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 170/340 (50%), Gaps = 14/340 (4%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
L+ + G P+ +T + +F ++ + + + +H+ R+G ++D +++ Y
Sbjct: 69 LYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYA 128
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
K A A R+F+ + DV WN MI Y GD++ ++++F ++P K+V SW T+I G
Sbjct: 129 KLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISG 188
Query: 125 LIRCGYERRALELLFCMVENGT-EFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
+ G AL++ CM ++ + + + +T +E+G++L G
Sbjct: 189 FSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFD 248
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ ++ ++ +EMY KCG D A + +++ GN + WNSM+ +GK+++
Sbjct: 249 NIYVCNATIEMYSKCGMIDVAKRLFEEL-------GNQRNLCSWNSMIGSLATHGKHDEA 301
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY---IQKIGHRIDAYVGSSL 300
L F M+ E D T ++ AC + G++ G+++ + KI +++ Y +
Sbjct: 302 LTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY--GCM 359
Query: 301 IHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHG 339
I + + G L +A+ + + + +P+ +W +++ C+ HG
Sbjct: 360 IDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 219/473 (46%), Gaps = 36/473 (7%)
Query: 8 EMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCK 67
MQ +G + + L K CS L +GK +H ++++G+++ +++++D+Y C
Sbjct: 228 RMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCG 287
Query: 68 AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIR 127
+ YA +F ++ L + + V WN+++ G +
Sbjct: 288 SLIYAADVFH-----------------------QEKLAV-----NSSVAVWNSMLSGFLI 319
Query: 128 CGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFI 187
AL LL + ++ F T + LG Q+H V+ D +
Sbjct: 320 NEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIV 379
Query: 188 NSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTF 247
S LV+++ G A + +P + I+ ++ ++ G V +G F
Sbjct: 380 GSILVDLHANVGNIQDAHKLFHRLP--------NKDIIAFSGLIRGCVKSGFNSLAFYLF 431
Query: 248 RSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKS 307
R ++ D V+ ++ C++ L +G+Q+H K G+ + ++L+ MY K
Sbjct: 432 RELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKC 491
Query: 308 GSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVI 367
G +D+ V+F + E +V WT +I G +G+ ++A F M+N GI PN+VTFLG++
Sbjct: 492 GEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLL 551
Query: 368 NACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHL 427
+AC H GLLEE + MK Y + P +EH +VDL G+AG E I + +
Sbjct: 552 SACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPD 611
Query: 428 TSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
++W S L++C HKN + ++E LL+ P DP Y LSN + WD+
Sbjct: 612 KTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQ 664
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 191/411 (46%), Gaps = 16/411 (3%)
Query: 5 LFREM-QAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
L+R M ++ N++ S+V K C ++QLG V+ + + + DVVL+NS++D+Y
Sbjct: 93 LYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMY 152
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
+K A F+ +WN +I Y AG +++++ +F +P +VVSWN +I
Sbjct: 153 VKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLIS 212
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
G + G RALE L M G + +GKQLH V+ L
Sbjct: 213 GFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLES 271
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
F S+L++MY CG A+ + L + + + WNSM+SG++ N + E
Sbjct: 272 SPFAISALIDMYSNCGSLIYAADVFHQEKLAV-----NSSVAVWNSMLSGFLINEENEAA 326
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
L + D T++ + C N L G Q+H+ + G+ +D VGS L+ +
Sbjct: 327 LWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDL 386
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
++ G++ DA +F ++ ++ ++ +I GC G A LF ++ G+ ++
Sbjct: 387 HANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIV 446
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH----CTSMVDLYGRAG 410
++ CS + L G + CI G E T++VD+Y + G
Sbjct: 447 SNILKVCSSLASLGWGKQIHGL-----CIKKGYESEPVTATALVDMYVKCG 492
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 158/377 (41%), Gaps = 59/377 (15%)
Query: 21 LSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTG 80
+++ + C + + G+ + A +++ G+ +V + N+++ +Y+ + A ++F+
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 81 EGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFC 140
E +++V+W T++ G G +A+EL
Sbjct: 68 E-------------------------------RNIVTWTTMVSGYTSDGKPNKAIELYRR 96
Query: 141 MVENGTEFS-EVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG 199
M+++ E + E + ++LG ++ R+ L GD + +S+V+MY K G
Sbjct: 97 MLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNG 156
Query: 200 RTDKASVILKDV-----------------------PLNLLRTGNSGGIVPWNSMVSGYVW 236
R +A+ K++ + L +V WN ++SG+V
Sbjct: 157 RLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVD 216
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
G L+ M E ++D + + AC+ GLL G+Q+H + K G +
Sbjct: 217 KGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFA 275
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQIN---EPNVFLWTSMISGCALHGKGKQASSLFEGMLN 353
S+LI MYS GSL A +F Q +V +W SM+SG ++ + + A L +
Sbjct: 276 ISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQ 335
Query: 354 QGIVPNEVTFLGVINAC 370
+ + T G + C
Sbjct: 336 SDLCFDSYTLSGALKIC 352
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 144/332 (43%), Gaps = 57/332 (17%)
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
G+ + VI ++ + FI ++++ MY A + ++ + IV W
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEM--------SERNIVTWT 75
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVH-ELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK 287
+MVSGY +GK ++ +R M+ E + + V+ AC G ++ G ++ I K
Sbjct: 76 TMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGK 135
Query: 288 IGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSL 347
R D + +S++ MY K+G L +A F++I P+ W ++ISG G +A +L
Sbjct: 136 ENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTL 195
Query: 348 FEGMLNQGIV--------------PNEVTFL------GVI----------NACSHVGLLE 377
F M +V P + FL G++ ACS GLL
Sbjct: 196 FHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLT 255
Query: 378 EGSTYFRMMKDVYC--INPGVEHC----TSMVDLYGRAGCLIETKNFIFEN--GISHLTS 429
G K ++C + G+E ++++D+Y G LI + + ++ +
Sbjct: 256 MG-------KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVA 308
Query: 430 VWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSD 461
VW S LS +++ E W +LLQ+ SD
Sbjct: 309 VWNSMLSGFLINEENEAALW---LLLQIYQSD 337
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 256 IVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWV 315
++D++ + + C + G + A++ K G + ++ +++I MY L DA
Sbjct: 2 VMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHK 61
Query: 316 IFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLN-QGIVPNEVTFLGVINACSHVG 374
+F +++E N+ WT+M+SG GK +A L+ ML+ + NE + V+ AC VG
Sbjct: 62 VFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVG 121
Query: 375 LLEEGS-TYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKS 433
++ G Y R+ K+ + V S+VD+Y + G LIE N F+ + ++ W +
Sbjct: 122 DIQLGILVYERIGKE--NLRGDVVLMNSVVDMYVKNGRLIEA-NSSFKEILRPSSTSWNT 178
Query: 434 FLS 436
+S
Sbjct: 179 LIS 181
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 61/110 (55%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ F LFRE+ G +Q+ +S++ K CS+ +L GK +H ++ G +++ V +++
Sbjct: 426 LAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALV 485
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL 110
D+Y+KC + LF+ E DVV+W +I + G VE++ F +
Sbjct: 486 DMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKM 535
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 176/316 (55%), Gaps = 9/316 (2%)
Query: 167 ELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP 226
++G+ +H + + D F+ SSLV+MY KCG A + ++P +V
Sbjct: 133 DIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP--------QRNVVT 184
Query: 227 WNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ 286
W+ M+ GY G+ E+ L F+ + E V+ + ++VIS CAN+ LLE GRQ+H
Sbjct: 185 WSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSI 244
Query: 287 KIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
K ++VGSSL+ +YSK G + A+ +F ++ N+ +W +M+ A H ++
Sbjct: 245 KSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIE 304
Query: 347 LFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLY 406
LF+ M G+ PN +TFL V+NACSH GL++EG YF MK+ I P +H S+VD+
Sbjct: 305 LFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDML 363
Query: 407 GRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYI 466
GRAG L E I I SVW + L+SC +HKN E+ + ++ + ++ P +I
Sbjct: 364 GRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHI 423
Query: 467 LLSNMCTSNHRWDEAA 482
LSN ++ R+++AA
Sbjct: 424 SLSNAYAADGRFEDAA 439
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 178/391 (45%), Gaps = 45/391 (11%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
M ++M A P+ + L S K C+ +G+ VH ++ G DADV + +S++
Sbjct: 99 MSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLV 158
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
D+Y KC YA + MF +P ++VV+W+
Sbjct: 159 DMYAKCGEIVYARK-------------------------------MFDEMPQRNVVTWSG 187
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
++ G + G AL L + ++ +F +ELG+Q+HG I +
Sbjct: 188 MMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSS 247
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
+ +F+ SSLV +Y KCG + A + +VP+ L GI WN+M+ Y +
Sbjct: 248 FDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNL------GI--WNAMLKAYAQHSHT 299
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVG--S 298
+ ++ F+ M + T V++AC++AGL++ GR + + Q RI+ +
Sbjct: 300 QKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGR--YYFDQMKESRIEPTDKHYA 357
Query: 299 SLIHMYSKSGSLDDAW-VIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV 357
SL+ M ++G L +A VI +P +W ++++ C +H + A+ + + G V
Sbjct: 358 SLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPV 417
Query: 358 PNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
+ + + + NA + G E+ + ++++D
Sbjct: 418 SSGM-HISLSNAYAADGRFEDAAKARKLLRD 447
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGN------SG 222
G QLHG V+ L+ + ++L+ Y K + +D P T + +
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 223 GIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMH 282
+PW S L+ + M+ D + + +CA + GR +H
Sbjct: 94 NELPWMS--------------LEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVH 139
Query: 283 AYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGK 342
K G+ D +VGSSL+ MY+K G + A +F ++ + NV W+ M+ G A G+ +
Sbjct: 140 CLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENE 199
Query: 343 QASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
+A LF+ L + + N+ +F VI+ C++ LLE G
Sbjct: 200 EALWLFKEALFENLAVNDYSFSSVISVCANSTLLELG 236
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 221/484 (45%), Gaps = 54/484 (11%)
Query: 50 DADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRN 109
+ +VV N ++ Y+K + A +FEL E +VV+W M++ Y+ G V ++ +F
Sbjct: 76 ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 110 LPSKDVVSWNTIIDGLIRCGYERRALELLFCM---------------------------V 142
+P ++ VSW + GLI G +A +L M
Sbjct: 136 MPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIF 195
Query: 143 ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTD 202
+ E + VT+ V++ ++L + +S++ Y GR +
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDVARKL----FEVMPEKTEVSWTSMLLGYTLSGRIE 251
Query: 203 KASVILKDVPLN--------LLRTGNSGGI---------------VPWNSMVSGYVWNGK 239
A + +P+ ++ G G I W M+ Y G
Sbjct: 252 DAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGF 311
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
+ L F M + ++ +++S CA L++GRQ+HA++ + D YV S
Sbjct: 312 ELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASV 371
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
L+ MY K G L A ++F + + ++ +W S+ISG A HG G++A +F M + G +PN
Sbjct: 372 LMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPN 431
Query: 360 EVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFI 419
+VT + ++ ACS+ G LEEG F M+ +C+ P VEH + VD+ GRAG + + I
Sbjct: 432 KVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELI 491
Query: 420 FENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
I +VW + L +C+ H +++ + ++ L + P + Y+LLS++ S +W
Sbjct: 492 ESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWG 551
Query: 480 EAAM 483
+ A+
Sbjct: 552 DVAV 555
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 172/386 (44%), Gaps = 28/386 (7%)
Query: 57 NSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVV 116
NSI+ Y + A +LF+ E +VV+WN ++ Y+ + ++ ++F +P ++VV
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
SW ++ G ++ G A L + M E +EV++ ++ ++L+ +
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
D +++++ C+ GR D+A +I + +R N +V W +M++GY
Sbjct: 168 PV----KDVVASTNMIGGLCREGRVDEARLIFDE-----MRERN---VVTWTTMITGYRQ 215
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
N + + K F M + + + T+++ +G +E + ++
Sbjct: 216 NNRVDVARKLFEVMPEKTEV----SWTSMLLGYTLSGRIEDAEEFF----EVMPMKPVIA 267
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
+++I + + G + A +F + + + W MI G +A LF M QG+
Sbjct: 268 CNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGV 327
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYC-INPGVEHCTSMVDLYGRAGCLIET 415
P+ + + +++ C+ + L+ G + V C + V + ++ +Y + G L++
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHL--VRCQFDDDVYVASVLMTMYVKCGELVKA 385
Query: 416 KNFIFENGISHLTSVWKSFLSSCRLH 441
K +F+ S +W S +S H
Sbjct: 386 K-LVFDRFSSKDIIMWNSIISGYASH 410
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
LF +MQ +G P+ +L S+ C+ +LQ G+ VHA ++R D DV + + ++ +
Sbjct: 316 LDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTM 375
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN-TI 121
Y+KC A+ +F+ D++ WN +I Y G E++L +F +PS + T+
Sbjct: 376 YVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTL 435
Query: 122 IDGLIRCGY 130
I L C Y
Sbjct: 436 IAILTACSY 444
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 220/480 (45%), Gaps = 45/480 (9%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
+REM+A G P++YT S+ K A + L K VH + G D+D + + ++ Y K
Sbjct: 149 YREMRANGILPDKYTFPSLLKGSDAME-LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSK 207
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKD-VVSWNTIIDG 124
+ E A+++F+ LP +D V WN +++G
Sbjct: 208 FMSVEDAQKVFD-------------------------------ELPDRDDSVLWNALVNG 236
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
+ AL + M E G S T ++ G+ +HG + D
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD 296
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
++++L++MY K ++A+ I + + L T WNS++ + + G ++ L
Sbjct: 297 IVVSNALIDMYGKSKWLEEANSIFEAMDERDLFT--------WNSVLCVHDYCGDHDGTL 348
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG----HRIDAYVGSSL 300
F M+ DI T+TTV+ C L GR++H Y+ G + ++ +SL
Sbjct: 349 ALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSL 408
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+ MY K G L DA ++F + + W MI+G + G+ A +F M G+ P+E
Sbjct: 409 MDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDE 468
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF 420
+TF+G++ ACSH G L EG + M+ VY I P +H ++D+ GRA L E
Sbjct: 469 ITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAI 528
Query: 421 ENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
I VW+S LSSCRLH N ++ + L ++ P Y+L+SN+ +++E
Sbjct: 529 SKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEE 588
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 161/371 (43%), Gaps = 47/371 (12%)
Query: 16 PNQYTLSSVFKC------CSAEKNLQLGKGVHAWMLRNG-VDADVVLVNSILDLYLKCKA 68
P +Y +V C C+ K+ G+ +H +M+R G +D S++++Y KC
Sbjct: 52 PKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKC-- 109
Query: 69 FEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRC 128
+M RA L G E+ DV +N +I G +
Sbjct: 110 -------------------GLMRRAVLVFGGSER-----------DVFGYNALISGFVVN 139
Query: 129 GYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFIN 188
G A+E M NG + TF ++ K++HG L + D ++
Sbjct: 140 GSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCYVG 198
Query: 189 SSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFR 248
S LV Y K + A + ++P + V WN++V+GY ++ED L F
Sbjct: 199 SGLVTSYSKFMSVEDAQKVFDELP-------DRDDSVLWNALVNGYSQIFRFEDALLVFS 251
Query: 249 SMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSG 308
M E V T+T+V+SA +G ++ GR +H K G D V ++LI MY KS
Sbjct: 252 KMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSK 311
Query: 309 SLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
L++A IF ++E ++F W S++ G +LFE ML GI P+ VT V+
Sbjct: 312 WLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLP 371
Query: 369 ACSHVGLLEEG 379
C + L +G
Sbjct: 372 TCGRLASLRQG 382
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 162/349 (46%), Gaps = 61/349 (17%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+F +M+ +G +++T++SV + ++ G+ +H ++ G +D+V+ N+++D+Y
Sbjct: 249 VFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYG 308
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL----PSKDVVSWNT 120
K K E A +FE E D+ TWN ++ + GD + +L +F + D+V+ T
Sbjct: 309 KSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTT 368
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
++ R R+ G+++HG +I
Sbjct: 369 VLPTCGRLASLRQ-----------------------------------GREIHGYMIVSG 393
Query: 181 L----NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
L + + FI++SL++MY KCG A ++ + +R +S WN M++GY
Sbjct: 394 LLNRKSSNEFIHNSLMDMYVKCGDLRDARMV-----FDSMRVKDSAS---WNIMINGYGV 445
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI---D 293
E L F M D T ++ AC+++G L GR A ++ + + + D
Sbjct: 446 QSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSD 505
Query: 294 AYVGSSLIHMYSKSGSLDDAWVIFRQINEP---NVFLWTSMISGCALHG 339
Y + +I M ++ L++A+ + I++P N +W S++S C LHG
Sbjct: 506 HY--ACVIDMLGRADKLEEAYEL--AISKPICDNPVVWRSILSSCRLHG 550
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 133/275 (48%), Gaps = 26/275 (9%)
Query: 169 GKQLHGRVITLA-LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPW 227
G+Q+HG ++ L+ +SLV MY KCG +A ++ G+ + +
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG---------GSERDVFGY 129
Query: 228 NSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK 287
N+++SG+V NG D ++T+R M + D T +++ ++A L +++H K
Sbjct: 130 NALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFK 188
Query: 288 IGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQI-NEPNVFLWTSMISGCALHGKGKQASS 346
+G D YVGS L+ YSK S++DA +F ++ + + LW ++++G + + + A
Sbjct: 189 LGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALL 248
Query: 347 LFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM------KDVYCINPGVEHCT 400
+F M +G+ + T V++A + G ++ G + + D+ N
Sbjct: 249 VFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSN------- 301
Query: 401 SMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFL 435
+++D+YG++ L E N IFE W S L
Sbjct: 302 ALIDMYGKSKWL-EEANSIFEAMDERDLFTWNSVL 335
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGV----DADVVLVN 57
+LF M G P+ TL++V C +L+ G+ +H +M+ +G+ ++ + N
Sbjct: 347 TLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHN 406
Query: 58 SILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMF 107
S++D+Y+KC A +F+ D +WNIMI Y E +LDMF
Sbjct: 407 SLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMF 456
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 224/482 (46%), Gaps = 44/482 (9%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
F M+ P + + K CS+ ++ GK H G +D+ + ++++ +Y
Sbjct: 64 FSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYST 123
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL 125
C G +E + +F +P +++VSW ++I G
Sbjct: 124 C-------------------------------GKLEDARKVFDEIPKRNIVSWTSMIRGY 152
Query: 126 IRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVE------LGKQLHGRVITL 179
G A+ L ++ + + + F L + +H VI
Sbjct: 153 DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKR 212
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
+ + ++L++ Y K G A V + V +NS++S Y +G
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGEGGVA------VARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 240 YEDCLKTFRSMV-HELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
+ + FR +V +++ + T++TV+ A +++G L G+ +H + ++G D VG+
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
S+I MY K G ++ A F ++ NV WT+MI+G +HG +A LF M++ G+ P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
N +TF+ V+ ACSH GL EG +F MK + + PG+EH MVDL GRAG L + +
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRW 478
I + + +W S L++CR+HKN+E+ + L ++ S+ Y+LLS++ RW
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRW 506
Query: 479 DE 480
+
Sbjct: 507 KD 508
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 3 FSLFREM-QAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F +FR + + K N TLS+V S L++GK +H ++R G++ DV++ SI+D
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMF 107
+Y KC E A + F+ +V +W MI Y G K+L++F
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/468 (29%), Positives = 232/468 (49%), Gaps = 36/468 (7%)
Query: 27 CCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVT 86
C + LGK +H+ ++ GV +DV++ +S++ +Y KC A ++F+ E +V T
Sbjct: 55 CACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVAT 114
Query: 87 WNIMIRAYLGAGDVEKSLDMFRNLP-SKDVVSWNTIIDGLIRCGYERRALELLFCMVENG 145
WN MI Y+ GD + +F + ++ V+W +I G + +A EL
Sbjct: 115 WNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKAREL-------- 166
Query: 146 TEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN-------GDNFINSSLVEMYCKC 198
F + F V LG ++ R + A + F+ S ++ Y +
Sbjct: 167 --FERMPFELKNVKAWS---VMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRI 221
Query: 199 GRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVD 258
G +A I V + +V WN++++GY NG +D + F +M E D
Sbjct: 222 GDVHEARAIFYRV--------FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPD 273
Query: 259 IRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFR 318
TV++++SACA +G L+ GR++H+ I G ++ +V ++LI MY+K G L++A +F
Sbjct: 274 AVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFE 333
Query: 319 QINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEE 378
I+ +V SMIS A+HGKGK+A +F M + + P+E+TF+ V+ AC H G L E
Sbjct: 334 SISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLME 393
Query: 379 GSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSC 438
G F MK + P V+H ++ L GR+G L E + E + +V + L +C
Sbjct: 394 GLKIFSEMK-TQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGAC 452
Query: 439 RLHKNIEMGKWVSEMLLQVAPSDPEAY-----ILLSNMCTSNHRWDEA 481
++H + EM + V + +++ A S +Y +SN+ RW A
Sbjct: 453 KVHMDTEMAEQVMK-IIETAGSITNSYSENHLASISNLYAHTERWQTA 499
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
F MQ +G P+ T+SS+ C+ L +G+ VH+ + G++ + + N+++D+Y K
Sbjct: 262 FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAK 321
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV----VSWNTI 121
C E A +FE V N MI G +++L+MF + S D+ +++ +
Sbjct: 322 CGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAV 381
Query: 122 IDGLIRCGYERRALELL 138
+ + G+ L++
Sbjct: 382 LTACVHGGFLMEGLKIF 398
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 262 VTTVISACA-NAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQI 320
V ++ ACA + G+ +H+ K G D VGSSLI MY K G + A +F ++
Sbjct: 48 VPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEM 107
Query: 321 NEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGS 380
E NV W +MI G +G AS LFE + + N VT++ +I +E+
Sbjct: 108 PERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKAR 164
Query: 381 TYFRMM 386
F M
Sbjct: 165 ELFERM 170
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 222/473 (46%), Gaps = 43/473 (9%)
Query: 9 MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKA 68
M AK + LS + + S+ K QL K +HA +LR G L+ +L+
Sbjct: 1 MLAKQTPLTKQMLSELLRA-SSSKPKQLKK-IHAIVLRTGFSEKNSLLTQLLE------- 51
Query: 69 FEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRC 128
N+++ GD+ + +F + + WNT+ G +R
Sbjct: 52 -------------------NLVV-----IGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 129 GYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFIN 188
+L L M + G E T+ G LH V+ +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 189 SSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFR 248
+ LV MY K G A + + + + +V WN+ ++ V G L+ F
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVK--------DLVAWNAFLAVCVQTGNSAIALEYFN 199
Query: 249 SMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSG 308
M + D TV +++SAC G LE G +++ +K + V ++ + M+ K G
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCG 259
Query: 309 SLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
+ + A V+F ++ + NV W++MI G A++G ++A +LF M N+G+ PN VTFLGV++
Sbjct: 260 NTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 319
Query: 369 ACSHVGLLEEGSTYFRMM--KDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISH 426
ACSH GL+ EG YF +M + + P EH MVDL GR+G L E FI + +
Sbjct: 320 ACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEP 379
Query: 427 LTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
T +W + L +C +H+++ +G+ V+++L++ AP ++LLSN+ + +WD
Sbjct: 380 DTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWD 432
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 160/342 (46%), Gaps = 51/342 (14%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
L+++M+ G P+++T V K S + G +HA +++ G ++ ++ +Y+
Sbjct: 96 LYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYM 155
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN--TII 122
K AE LFE D+V WN + + G+ +L+ F + + D V ++ T++
Sbjct: 156 KFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA-DAVQFDSFTVV 214
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
L CG +E+G++++ R ++
Sbjct: 215 SMLSACG--------------------------------QLGSLEIGEEIYDRARKEEID 242
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ + ++ ++M+ KCG T+ A V+ +++ +V W++M+ GY NG +
Sbjct: 243 CNIIVENARLDMHLKCGNTEAARVLFEEM--------KQRNVVSWSTMIVGYAMNGDSRE 294
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI-----QKIGHRIDAYVG 297
L F +M +E + T V+SAC++AGL+ G++ + + + + R + Y
Sbjct: 295 ALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHY-- 352
Query: 298 SSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
+ ++ + +SG L++A+ +++ EP+ +W +++ CA+H
Sbjct: 353 ACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 137/538 (25%), Positives = 238/538 (44%), Gaps = 69/538 (12%)
Query: 2 VFSLFREMQAKGAC-PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVV-LVNSI 59
F + +MQ+ P+ T+ S+ C + G+ VH + +R + + + ++NS+
Sbjct: 376 AFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSV 435
Query: 60 LDLYLKCKAFEYAERLFELTGEGDVVTWNIMIR--------------------------- 92
+D+Y KC AE LF+ T D+V+WN MI
Sbjct: 436 IDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKF 495
Query: 93 ------AYLGAGDVEKSLDMFRNL---------------------PSKDVVSWNTIIDGL 125
A L + D SL +++ ++D+ SWN++I G
Sbjct: 496 SLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGC 555
Query: 126 IRCGYERRALELLFCMVENGT-EFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
G+ +L M G +T V G+ HG I D
Sbjct: 556 ASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELD 615
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ ++L+ MY +C + A + L+ N + WN ++S N +
Sbjct: 616 TQLQNTLITMYGRCKDIESAVKVF-----GLISDPN---LCSWNCVISALSQNKAGREVF 667
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMY 304
+ FR++ E + T ++SA G +G Q H ++ + G + + +V ++L+ MY
Sbjct: 668 QLFRNLKLEPNEI---TFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMY 724
Query: 305 SKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGML-NQGIVPNEVTF 363
S G L+ +FR ++ W S+IS HG G++A LF+ + N + PN+ +F
Sbjct: 725 SSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSF 784
Query: 364 LGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
+ +++ACSH G ++EG +Y++ M++ + + P EH +VD+ GRAG L E FI G
Sbjct: 785 ISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIG 844
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
VW + LS+C H + ++GK V+E+L ++ P + YI L+N W+EA
Sbjct: 845 EPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEA 902
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 184/412 (44%), Gaps = 69/412 (16%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGV--DADVVLVNSILDLY 63
F+ M G + T S V CS+ + L LG+ +H ++++G +A V + NSI+ +Y
Sbjct: 277 FKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMY 336
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
KC GD E + +F L +DV+S N I++
Sbjct: 337 SKC-------------------------------GDTEAAETVFEELVCRDVISSNAILN 365
Query: 124 GLIRCGYERRALELLFCMVE-NGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G G A +L M + + T G+ +HG + + +
Sbjct: 366 GFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQ 425
Query: 183 GDNF-INSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ +S+++MY KCG T +A ++ K T +V WNSM+S + NG
Sbjct: 426 SRALEVINSVIDMYGKCGLTTQAELLFK--------TTTHRDLVSWNSMISAFSQNGFTH 477
Query: 242 DCLKTFRSMVHELAI--VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
F+ +V E + + TV ++++C ++ L FG+ +H ++QK+
Sbjct: 478 KAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKL----------- 526
Query: 300 LIHMYSKSGSLDDAWVIFRQINEP-NVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
G L A++ ++E ++ W S+ISGCA G ++ F+ M +G +
Sbjct: 527 --------GDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIR 578
Query: 359 NE-VTFLGVINACSHVGLLEEGSTYFRM-MKDVYCINPGVEHCTSMVDLYGR 408
++ +T LG I+A ++GL+ +G + + +K + ++ +++ +++ +YGR
Sbjct: 579 HDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQN--TLITMYGR 628
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 135/277 (48%), Gaps = 12/277 (4%)
Query: 82 GDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCM 141
GD N ++ Y ++ + +F ++ +D+VSWNTI+ + G+ R++L+ M
Sbjct: 221 GDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSM 280
Query: 142 VENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFIN--SSLVEMYCKCG 199
+G E VTF + LG+ LHG VI + + ++ +S++ MY KCG
Sbjct: 281 TGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340
Query: 200 RTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI-VD 258
T+ A + +++ ++ N++++G+ NG +E+ M I D
Sbjct: 341 DTEAAETVFEELVCR--------DVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
Query: 259 IRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY-VGSSLIHMYSKSGSLDDAWVIF 317
I TV ++ S C + GR +H Y ++ + A V +S+I MY K G A ++F
Sbjct: 393 IATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF 452
Query: 318 RQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQ 354
+ ++ W SMIS + +G +A +LF+ ++++
Sbjct: 453 KTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE 489
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 159/362 (43%), Gaps = 20/362 (5%)
Query: 83 DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMV 142
D+ T + ++ Y G++ S +F L KDV+ WN++I L + G A+ L M+
Sbjct: 121 DLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMI 180
Query: 143 ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTD 202
G EF T LH I L GD+ + ++L+ +Y K
Sbjct: 181 HKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLS 240
Query: 203 KASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTV 262
A + + IV WN++++ + NG L+ F+SM D T
Sbjct: 241 SAECVFTHMEHR--------DIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTF 292
Query: 263 TTVISACANAGLLEFGRQMHAYIQKIGHRIDAY--VGSSLIHMYSKSGSLDDAWVIFRQI 320
+ VISAC++ L G +H + K G+ +A+ VG+S+I MYSK G + A +F ++
Sbjct: 293 SCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL 352
Query: 321 NEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQ-----GIVPNEVTFLGVINACSHVGL 375
+V ++++G A +G ++A G+LNQ I P+ T + + + C +
Sbjct: 353 VCRDVISSNAILNGFAANGMFEEAF----GILNQMQSVDKIQPDIATVVSITSICGDLSF 408
Query: 376 LEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFL 435
EG + + +E S++D+YG+ G L +F+ W S +
Sbjct: 409 SREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCG-LTTQAELLFKTTTHRDLVSWNSMI 467
Query: 436 SS 437
S+
Sbjct: 468 SA 469
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 164/389 (42%), Gaps = 51/389 (13%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQL---GKGVHAWMLRNGVDADVVLVNSILDL 62
F+ M +G ++ L ++ SA NL L G+ H +++ + D L N+++ +
Sbjct: 568 FQAMSREGKI--RHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITM 625
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y +CK D+E ++ +F + ++ SWN +I
Sbjct: 626 YGRCK-------------------------------DIESAVKVFGLISDPNLCSWNCVI 654
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
L + R +L + E +E+TF G Q H +I
Sbjct: 655 SALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQ 711
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ F++++LV+MY CG + + + + R I WNS++S + ++G E
Sbjct: 712 ANPFVSAALVDMYSSCG--------MLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEK 763
Query: 243 CLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYI-QKIGHRIDAYVGSSL 300
++ F+ + + + + +++SAC+++G ++ G + + +K G + +
Sbjct: 764 AMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWI 823
Query: 301 IHMYSKSGSLDDAWVIFRQINEPN-VFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
+ M ++G L +A+ I EP +W +++S C HG K + E +L + N
Sbjct: 824 VDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAE-VLFEMEPDN 882
Query: 360 EVTFLGVINACSHVGLLEEGSTYFRMMKD 388
++ + N +G EE +M++D
Sbjct: 883 ASYYISLANTYVGLGGWEEAVRLRKMVED 911
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 115/257 (44%), Gaps = 10/257 (3%)
Query: 166 VELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIV 225
E + +H + L D +S L+ Y + G +S + ++ ++
Sbjct: 103 TETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDEL--------KEKDVI 154
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI 285
WNSM++ NG+Y + F M+H+ D T+ SA ++ L +H
Sbjct: 155 VWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLA 214
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQAS 345
+ G D+ + ++L+++Y+K +L A +F + ++ W ++++ C +G +++
Sbjct: 215 IETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSL 274
Query: 346 SLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVD 404
F+ M G + VTF VI+ACS + L G S + ++K Y V S++
Sbjct: 275 QYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIIS 334
Query: 405 LYGRAGCLIETKNFIFE 421
+Y + G E +FE
Sbjct: 335 MYSKCG-DTEAAETVFE 350
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 183/345 (53%), Gaps = 30/345 (8%)
Query: 166 VELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVIL-----KDVPL------- 213
+ LG++ H +++ L+ D F+ +SL+ MY CG A + KD+P
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 214 -----------NLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMV-----HELAIV 257
L ++ W+ +++GYV GKY++ L FR M
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 258 DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF 317
+ T++TV+SAC G LE G+ +HAYI K ID +G++LI MY+K GSL+ A +F
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 318 RQI-NEPNVFLWTSMISGCALHGKGKQASSLFEGML-NQGIVPNEVTFLGVINACSHVGL 375
+ ++ +V +++MI A++G + LF M + I PN VTF+G++ AC H GL
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 376 LEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFL 435
+ EG +YF+MM + + I P ++H MVDLYGR+G + E ++FI + +W S L
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 436 SSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
S R+ +I+ + + L+++ P + AY+LLSN+ RW E
Sbjct: 378 SGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWME 422
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 162/347 (46%), Gaps = 15/347 (4%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
S++ M+ P+ +T + +L LG+ HA +L G+D D + S+L++Y
Sbjct: 48 SVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMY 107
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
C A+R+F+ +G D+ WN ++ AY AG ++ + +F +P ++V+SW+ +I+
Sbjct: 108 SSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLIN 167
Query: 124 GLIRCGYERRALELLFCMV-----ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVIT 178
G + CG + AL+L M E +E T +E GK +H +
Sbjct: 168 GYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDK 227
Query: 179 LALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG 238
+ D + ++L++MY KCG ++A + + G+ + +++M+ G
Sbjct: 228 YHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL-------GSKKDVKAYSAMICCLAMYG 280
Query: 239 KYEDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQ-MHAYIQKIGHRIDAYV 296
++C + F M I + T ++ AC + GL+ G+ I++ G
Sbjct: 281 LTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQH 340
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGK 342
++ +Y +SG + +A + EP+V +W S++SG + G K
Sbjct: 341 YGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIK 387
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 40/229 (17%)
Query: 227 WNSMVSGYVWN---GKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHA 283
WN ++ V N + + + M + D T ++ + N L G++ HA
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 284 YIQKIGHRIDAYVGSSLIHMYS-------------------------------KSGSLDD 312
I G D +V +SL++MYS K+G +DD
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 313 AWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGML----NQGIV-PNEVTFLGVI 367
A +F ++ E NV W+ +I+G + GK K+A LF M N+ V PNE T V+
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 368 NACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
+AC +G LE+G + D Y + + T+++D+Y + G L K
Sbjct: 207 SACGRLGALEQGK-WVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAK 254
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 231/486 (47%), Gaps = 55/486 (11%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+LF ++ + +T + V CS + G+ VHA M++ G + + +++D+
Sbjct: 69 LALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDM 128
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y K G + S+ +F ++ KD+VSWN ++
Sbjct: 129 YSK-------------------------------YGHLVDSVRVFESVEEKDLVSWNALL 157
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G +R G + AL + M E SE T ++ GKQ+H V+ +
Sbjct: 158 SGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV---VT 214
Query: 183 GDNFI--NSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
G + + ++++ Y G ++A + + ++ V NS++SG + N Y
Sbjct: 215 GRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDE-------VMLNSLISGCIRNRNY 267
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
++ F M + ++R +++ ++ C++ L G+Q+H + G D+ + + L
Sbjct: 268 KE---AFLLMSRQRP--NVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGL 322
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG--IVP 358
+ MY K G + A IFR I +V WTSMI A++G G +A +F M +G ++P
Sbjct: 323 MDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLP 382
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
N VTFL VI+AC+H GL++EG F MMK+ Y + PG EH +D+ +AG E
Sbjct: 383 NSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRL 442
Query: 419 I---FENGISHLT-SVWKSFLSSCRLHKNIEMGKWVSEMLL-QVAPSDPEAYILLSNMCT 473
+ EN + ++W + LS+C L+ ++ G++V+ L+ + P + Y+L+SN
Sbjct: 443 VERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYA 502
Query: 474 SNHRWD 479
+ +WD
Sbjct: 503 AMGKWD 508
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 29/365 (7%)
Query: 80 GEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLF 139
G V + N+++R + +F LP +D+ S N+ + +R G L L
Sbjct: 14 GNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFL 73
Query: 140 CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG 199
+ + S TF E G+Q+H +I ++L++MY K G
Sbjct: 74 QIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYG 133
Query: 200 RTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDI 259
+ + + V +V WN+++SG++ NGK ++ L F +M E +
Sbjct: 134 HLVDSVRVFESV--------EEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISE 185
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
T+++V+ CA+ +L+ G+Q+HA + G + +G+++I YS G +++A ++
Sbjct: 186 FTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNS 244
Query: 320 IN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEE 378
+N + + S+ISGC + K+A F M Q PN + CS L
Sbjct: 245 LNVHTDEVMLNSLISGCIRNRNYKEA---FLLMSRQR--PNVRVLSSSLAGCSDNSDLWI 299
Query: 379 GSTYFRMMKDVYCIN------PGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWK 432
G K ++C+ + C ++D+YG+ G +++ + IF S W
Sbjct: 300 G-------KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQART-IFRAIPSKSVVSWT 351
Query: 433 SFLSS 437
S + +
Sbjct: 352 SMIDA 356
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 18/245 (7%)
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
+G D L F + + T T V+ AC+ E GRQ+HA + K G
Sbjct: 62 SGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS 121
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
++LI MYSK G L D+ +F + E ++ W +++SG +GKGK+A +F M + +
Sbjct: 122 KTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERV 181
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMM----KDVYCINPGVEHCTSMVDLYGRAGCL 412
+E T V+ C+ + +L++G M+ +D+ + T+M+ Y G +
Sbjct: 182 EISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLG------TAMISFYSSVGLI 235
Query: 413 IETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNM- 471
E + + S +S C ++N + E L ++ P +L S++
Sbjct: 236 NEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYK------EAFLLMSRQRPNVRVLSSSLA 289
Query: 472 -CTSN 475
C+ N
Sbjct: 290 GCSDN 294
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 191 bits (485), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 228/480 (47%), Gaps = 42/480 (8%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
LF M+ P+ TL+SV C + +LG+ +HA+++ G D+ + NS+ +
Sbjct: 282 LELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQM 341
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
YL AG ++ +F + KD+VSW T+I
Sbjct: 342 YL-------------------------------NAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G +A++ M ++ + E+T ++ G +LH I L
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ ++L+ MY KC DKA I ++P ++ W S+++G N + +
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIP--------RKNVISWTSIIAGLRLNNRCFE 482
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
L R M L + T+T ++ACA G L G+++HA++ + G +D ++ ++L+
Sbjct: 483 ALIFLRQMKMTLQ-PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLD 541
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MY + G ++ AW F + +V W +++G + G+G LF+ M+ + P+E+T
Sbjct: 542 MYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEIT 600
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
F+ ++ CS ++ +G YF M+D Y + P ++H +VDL GRAG L E FI +
Sbjct: 601 FISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKM 659
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
++ +VW + L++CR+H I++G+ ++ + ++ YILL N+ +W E A
Sbjct: 660 PVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVA 719
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 157/355 (44%), Gaps = 44/355 (12%)
Query: 7 REMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKC 66
R + G P+ YT V + C +L GK VH ++R G + D+ +VN+++ +Y+KC
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 67 KAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLI 126
GDV+ + +F +P +D++SWN +I G
Sbjct: 245 -------------------------------GDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 127 RCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNF 186
G LEL F M + +T LG+ +H VIT D
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 187 INSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKT 246
+ +SL +MY G +A L IV W +M+SGY +N + + T
Sbjct: 334 VCNSLTQMYLNAGSWREAE--------KLFSRMERKDIVSWTTMISGYEYNFLPDKAIDT 385
Query: 247 FRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY--VGSSLIHMY 304
+R M + D TV V+SACA G L+ G ++H I R+ +Y V ++LI+MY
Sbjct: 386 YRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL--AIKARLISYVIVANNLINMY 443
Query: 305 SKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
SK +D A IF I NV WTS+I+G L+ + +A +F + + PN
Sbjct: 444 SKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA-LIFLRQMKMTLQPN 497
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 178/375 (47%), Gaps = 12/375 (3%)
Query: 88 NIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTE 147
N + ++ G++ + +F + +++ SWN ++ G + GY A+ L M+ G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 148 FSEV-TFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASV 206
+V TF + GK++H V+ D + ++L+ MY KCG A +
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 207 ILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVI 266
+ +P I+ WN+M+SGY NG + L+ F +M D+ T+T+VI
Sbjct: 253 LFDRMPRR--------DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 267 SACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVF 326
SAC G GR +HAY+ G +D V +SL MY +GS +A +F ++ ++
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 327 LWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM 386
WT+MISG + +A + M + P+E+T V++AC+ +G L+ G ++
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 387 KDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKN-IE 445
I+ V +++++Y + C+ + + IF N W S ++ RL+ E
Sbjct: 425 IKARLISY-VIVANNLINMYSKCKCIDKALD-IFHNIPRKNVISWTSIIAGLRLNNRCFE 482
Query: 446 MGKWVSEMLLQVAPS 460
++ +M + + P+
Sbjct: 483 ALIFLRQMKMTLQPN 497
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
G NGK E+ +K SM VD ++ C E G ++++ +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGML 352
+G++ + M+ + G+L DAW +F +++E N+F W ++ G A G +A L+ ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 353 -NQGIVPNEVTFLGVINACSHVGLLEEG 379
G+ P+ TF V+ C + L G
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARG 215
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 228/500 (45%), Gaps = 55/500 (11%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKN-LQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
L+ M +G P+ +T + + L GK +H +++ G+ +++ + N+++ +Y
Sbjct: 121 LYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMY 180
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
C + A +F+ + +DV SWN +I
Sbjct: 181 SLCGLMDMARGVFDRRCK-------------------------------EDVFSWNLMIS 209
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
G R ++ELL M N + VT +L K++H V
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVP-------------------LNLLRTGNSGGI 224
+ ++LV Y CG D A I + + L L RT
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 225 V----PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQ 280
V W M+ GY+ G + + L+ FR M I D T+ +V++ACA+ G LE G
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 281 MHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGK 340
+ YI K + D VG++LI MY K G + A +F +++ + F WT+M+ G A +G+
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 341 GKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCT 400
G++A +F M + I P+++T+LGV++AC+H G++++ +F M+ + I P + H
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 401 SMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPS 460
MVD+ GRAG + E + + ++ + VW + L + RLH + M + ++ +L++ P
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569
Query: 461 DPEAYILLSNMCTSNHRWDE 480
+ Y LL N+ RW +
Sbjct: 570 NGAVYALLCNIYAGCKRWKD 589
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 147/347 (42%), Gaps = 41/347 (11%)
Query: 97 AGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXX 156
G V + +F +P DVV WN +I G + + + L M++ G TF
Sbjct: 81 GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFL 140
Query: 157 XXXXXXXX-XVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNL 215
+ GK+LH V+ L + ++ ++LV+MY CG L D+ +
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG--------LMDMARGV 192
Query: 216 LRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLL 275
+ WN M+SGY +YE+ ++ M L T+ V+SAC+
Sbjct: 193 FDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK 252
Query: 276 EFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGC 335
+ +++H Y+ + + ++L++ Y+ G +D A IFR + +V WTS++ G
Sbjct: 253 DLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGY 312
Query: 336 ALHGKGKQASS-------------------------------LFEGMLNQGIVPNEVTFL 364
G K A + +F M + G++P+E T +
Sbjct: 313 VERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMV 372
Query: 365 GVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGC 411
V+ AC+H+G LE G + + D I V +++D+Y + GC
Sbjct: 373 SVLTACAHLGSLEIGE-WIKTYIDKNKIKNDVVVGNALIDMYFKCGC 418
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 196/394 (49%), Gaps = 17/394 (4%)
Query: 90 MIRAYLGAGDVEKSLDMFRNLPSKD--VVSWNTIIDGLIRCGYERRALELLFCMVENGTE 147
++R Y G E + ++F + +D +WN++I G G A+ L F M E+G +
Sbjct: 133 LVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVK 192
Query: 148 FSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVI 207
TF V++G+ +H ++ D ++ ++LV MY KCG KA +
Sbjct: 193 PDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNV 252
Query: 208 LKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVIS 267
+P V WNSM++GY+ +G + L FR MV D +++V++
Sbjct: 253 FDMIP--------HKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLA 304
Query: 268 ACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFL 327
+ + GRQ+H ++ + G + V ++LI +YSK G L A IF Q+ E +
Sbjct: 305 RVLS---FKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVS 361
Query: 328 WTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK 387
W ++IS H K FE M P+ +TF+ V++ C++ G++E+G F +M
Sbjct: 362 WNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMS 418
Query: 388 DVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF-ENGISHLTSVWKSFLSSCRLHKNIEM 446
Y I+P +EH MV+LYGRAG + E + I E G+ +VW + L +C LH N ++
Sbjct: 419 KEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDI 478
Query: 447 GKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
G+ ++ L ++ P + + LL + + R ++
Sbjct: 479 GEVAAQRLFELEPDNEHNFELLIRIYSKAKRAED 512
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 185/395 (46%), Gaps = 63/395 (15%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
+L+ +M G P+++T V K C ++Q+G+ +H +++ G DV ++N+++ +Y
Sbjct: 181 ALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMY 240
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
KC GD+ K+ ++F +P KD VSWN+++
Sbjct: 241 AKC-------------------------------GDIVKARNVFDMIPHKDYVSWNSMLT 269
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
G + G AL++ MV+NG E +V + G+QLHG VI +
Sbjct: 270 GYLHHGLLHEALDIFRLMVQNGIEPDKVAI---SSVLARVLSFKHGRQLHGWVIRRGMEW 326
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ + ++L+ +Y K G+ +A I + L R V WN+++S + N +
Sbjct: 327 ELSVANALIVLYSKRGQLGQACFIFDQM---LERD-----TVSWNAIISAHSKNS---NG 375
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRIDAYVGSSL 300
LK F M A D T +V+S CAN G++E G ++ + + K I +++ Y + +
Sbjct: 376 LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHY--ACM 433
Query: 301 IHMYSKSGSLDDAW-VIFRQIN-EPNVFLWTSMISGCALHGKGK----QASSLFEGMLNQ 354
+++Y ++G +++A+ +I +++ E +W +++ C LHG A LFE
Sbjct: 434 VNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE----- 488
Query: 355 GIVP-NEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
+ P NE F +I S E+ +MM D
Sbjct: 489 -LEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVD 522
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 21/313 (6%)
Query: 166 VELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIV 225
++ G ++H + L + I+S LV +Y CG + A + + +
Sbjct: 108 IDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM------SKRDSSPF 161
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI 285
WNS++SGY G+YED + + M + D T V+ AC G ++ G +H +
Sbjct: 162 AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQAS 345
K G D YV ++L+ MY+K G + A +F I + W SM++G HG +A
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEAL 281
Query: 346 SLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVE----HCTS 401
+F M+ GI P++V V+ + V + G R + + I G+E +
Sbjct: 282 DIFRLMVQNGIEPDKVAISSVL---ARVLSFKHG----RQLHG-WVIRRGMEWELSVANA 333
Query: 402 MVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSD 461
++ LY + G L + FIF+ + T W + +S+ KN K+ +M A D
Sbjct: 334 LIVLYSKRGQLGQA-CFIFDQMLERDTVSWNAIISAHS--KNSNGLKYFEQMHRANAKPD 390
Query: 462 PEAYILLSNMCTS 474
++ + ++C +
Sbjct: 391 GITFVSVLSLCAN 403
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 217/473 (45%), Gaps = 41/473 (8%)
Query: 8 EMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCK 67
EM G + ++ C ++ L+ G+ VHA M++ L +L Y KC
Sbjct: 42 EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 101
Query: 68 AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIR 127
E D K LD +P K+VVSW +I +
Sbjct: 102 CLE----------------------------DARKVLD---EMPEKNVVSWTAMISRYSQ 130
Query: 128 CGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFI 187
G+ AL + M+ + + +E TF + LGKQ+HG ++ + F+
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 188 NSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTF 247
SSL++MY K G+ +A I + +P +V ++++GY G E+ L+ F
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLP--------ERDVVSCTAIIAGYAQLGLDEEALEMF 242
Query: 248 RSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKS 307
+ E + T ++++A + LL+ G+Q H ++ + A + +SLI MYSK
Sbjct: 243 HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 302
Query: 308 GSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV-PNEVTFLGV 366
G+L A +F + E W +M+ G + HG G++ LF M ++ V P+ VT L V
Sbjct: 303 GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAV 362
Query: 367 INACSHVGLLEEGSTYFR-MMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGIS 425
++ CSH + + G F M+ Y PG EH +VD+ GRAG + E FI
Sbjct: 363 LSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Query: 426 HLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRW 478
V S L +CR+H ++++G+ V L+++ P + Y++LSN+ S RW
Sbjct: 423 PTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRW 475
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 150/343 (43%), Gaps = 47/343 (13%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
++F EM PN++T ++V C L LGK +H +++ D+ + + +S+LD
Sbjct: 137 ALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLD 196
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y K + A +FE E DVV+ +I Y G E++L+MF L S+
Sbjct: 197 MYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE-------- 248
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
G + VT+ ++ GKQ H V+ L
Sbjct: 249 -----------------------GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRREL 285
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ +SL++MY KCG A + ++P RT + WN+M+ GY +G
Sbjct: 286 PFYAVLQNSLIDMYSKCGNLSYARRLFDNMP---ERTA-----ISWNAMLVGYSKHGLGR 337
Query: 242 DCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS- 299
+ L+ FR M E + D T+ V+S C++ + + G ++ + + G+
Sbjct: 338 EVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTG--LNIFDGMVAGEYGTKPGTEH 395
Query: 300 ---LIHMYSKSGSLDDAW-VIFRQINEPNVFLWTSMISGCALH 338
++ M ++G +D+A+ I R ++P + S++ C +H
Sbjct: 396 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 438
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 9/198 (4%)
Query: 224 IVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHA 283
I+P + + S NG+ ++ L + E+ +++AC + L G+++HA
Sbjct: 24 ILPISQLCS----NGRLQEALLEMAMLGPEMGF---HGYDALLNACLDKRALRDGQRVHA 76
Query: 284 YIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQ 343
++ K + Y+ + L+ Y K L+DA + ++ E NV WT+MIS + G +
Sbjct: 77 HMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSE 136
Query: 344 ASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMV 403
A ++F M+ PNE TF V+ +C L G ++ + + + +S++
Sbjct: 137 ALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK-WNYDSHIFVGSSLL 195
Query: 404 DLYGRAGCLIETKNFIFE 421
D+Y +AG + E + IFE
Sbjct: 196 DMYAKAGQIKEARE-IFE 212
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 216/466 (46%), Gaps = 56/466 (12%)
Query: 40 VHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGD 99
+HA +LR+ + +L+ + + +YA R+F +V+ +N MI+ Y G
Sbjct: 23 IHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGP 82
Query: 100 VEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXX 159
+SL F ++ S+ + W E T+
Sbjct: 83 PLESLSFFSSMKSRGI--WA-----------------------------DEYTYAPLLKS 111
Query: 160 XXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVP------- 212
+ GK +HG +I + I +VE+Y GR A + ++
Sbjct: 112 CSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVW 171
Query: 213 ----------------LNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI 256
L+L + + IV WNSM+S G+ + L+ F M+ +
Sbjct: 172 NLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFD 231
Query: 257 VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRID-AYVGSSLIHMYSKSGSLDDAWV 315
D TV TV+ A+ G+L+ G+ +H+ + G D VG++L+ Y KSG L+ A
Sbjct: 232 PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATA 291
Query: 316 IFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG-IVPNEVTFLGVINACSHVG 374
IFR++ NV W ++ISG A++GKG+ LF+ M+ +G + PNE TFLGV+ CS+ G
Sbjct: 292 IFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTG 351
Query: 375 LLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSF 434
+E G F +M + + + EH +MVDL R+G + E F+ ++ ++W S
Sbjct: 352 QVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSL 411
Query: 435 LSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
LS+CR H ++++ + + L+++ P + Y+LLSN+ RW +
Sbjct: 412 LSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQD 457
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 178/348 (51%), Gaps = 16/348 (4%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
S F M+++G ++YT + + K CS+ +L+ GK VH ++R G + +++L
Sbjct: 87 LSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVEL 146
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y A+++F+ E +VV WN+MIR + +GDVE+ L +F+ + + +VSWN++I
Sbjct: 147 YTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMI 206
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
L +CG +R ALEL M++ G + E T ++ GK +H + L
Sbjct: 207 SSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLF 266
Query: 183 GDNF-INSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
D + ++LV+ YCK G + A+ I + + +V WN+++SG NGK E
Sbjct: 267 KDFITVGNALVDFYCKSGDLEAATAIFRKMQRR--------NVVSWNTLISGSAVNGKGE 318
Query: 242 DCLKTFRSMVHELAIV-DIRTVTTVISACANAGLLEFGRQMHAYIQ---KIGHRIDAYVG 297
+ F +M+ E + + T V++ C+ G +E G ++ + K+ R + Y
Sbjct: 319 FGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHY-- 376
Query: 298 SSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQA 344
+++ + S+SG + +A+ + + N +W S++S C HG K A
Sbjct: 377 GAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLA 424
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 209/468 (44%), Gaps = 78/468 (16%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
P+ YT V K CS + +G+ +H + G+ + + + N ++ +Y KC A +
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
+ + +DVVSWN+++ G + AL
Sbjct: 198 LD-------------------------------EMSRRDVVSWNSLVVGYAQNQRFDDAL 226
Query: 136 ELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLV--- 192
E+ C + S G + +L N +++
Sbjct: 227 EV--CREMESVKISHDA---------------------GTMASLLPAVSNTTTENVMYVK 263
Query: 193 EMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVH 252
+M+ K G+ +V WN M+ Y+ N + ++ + M
Sbjct: 264 DMFFKMGKK---------------------SLVSWNVMIGVYMKNAMPVEAVELYSRMEA 302
Query: 253 ELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDD 312
+ D ++T+V+ AC + L G+++H YI++ + + ++LI MY+K G L+
Sbjct: 303 DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEK 362
Query: 313 AWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSH 372
A +F + +V WT+MIS G+G A +LF + + G+VP+ + F+ + ACSH
Sbjct: 363 ARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSH 422
Query: 373 VGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWK 432
GLLEEG + F++M D Y I P +EH MVDL GRAG + E FI + + VW
Sbjct: 423 AGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWG 482
Query: 433 SFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
+ L +CR+H + ++G ++ L Q+AP Y+LLSN+ RW+E
Sbjct: 483 ALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 530
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 134/312 (42%), Gaps = 38/312 (12%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
+ +H R+I L ++ + L+ Y A + ++P ++ N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP--------ERNVIIINV 110
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG 289
M+ YV NG Y + +K F +M D T V+ AC+ +G + GR++H K+G
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 170
Query: 290 HRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFE 349
+VG+ L+ MY K G L +A ++ +++ +V W S++ G A + + A +
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 350 GMLNQGIVPNEVTFLGVINACSHV---GLLEEGSTYFRMMKD---VYCINPGVEHCTSM- 402
M + I + T ++ A S+ ++ +F+M K + + GV +M
Sbjct: 231 EMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMP 290
Query: 403 ---VDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSC----------RLHKNIEMGKW 449
V+LY R +E FE +TSV L +C ++H IE K
Sbjct: 291 VEAVELYSR----MEADG--FEPDAVSITSV----LPACGDTSALSLGKKIHGYIERKKL 340
Query: 450 VSEMLLQVAPSD 461
+ +LL+ A D
Sbjct: 341 IPNLLLENALID 352
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
L+ M+A G P+ +++SV C L LGK +H ++ R + +++L N+++D+Y
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYA 355
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVV 116
KC E A +FE DVV+W MI AY +G ++ +F L +V
Sbjct: 356 KCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV 407
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 219/450 (48%), Gaps = 45/450 (10%)
Query: 38 KGVHAWMLRNGV--DADVVL-VNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAY 94
+ +HA +LR + ++DV S L L L + Y+ R+F + N MIRA+
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAF 87
Query: 95 LGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFX 154
+ + +FR+L + N + L C +++G
Sbjct: 88 SLSQTPCEGFRLFRSLRRNSSLPANPLSSSFA-----------LKCCIKSGDLLG----- 131
Query: 155 XXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLN 214
G Q+HG++ + D+ + ++L+++Y C + A + ++P
Sbjct: 132 --------------GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIP-- 175
Query: 215 LLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHEL---AIVDIRTVTTVISACAN 271
V WN + S Y+ N + D L F M +++ D T + ACAN
Sbjct: 176 ------KRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACAN 229
Query: 272 AGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSM 331
G L+FG+Q+H +I + G + ++L+ MYS+ GS+D A+ +F + E NV WT++
Sbjct: 230 LGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTAL 289
Query: 332 ISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYF-RMMKDVY 390
ISG A++G GK+A F ML GI P E T G+++ACSH GL+ EG +F RM +
Sbjct: 290 ISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEF 349
Query: 391 CINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWV 450
I P + H +VDL GRA L + + I + +++W++ L +CR+H ++E+G+ V
Sbjct: 350 KIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERV 409
Query: 451 SEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
L+++ + Y+LL N ++ +W++
Sbjct: 410 ISHLIELKAEEAGDYVLLLNTYSTVGKWEK 439
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 162/343 (47%), Gaps = 44/343 (12%)
Query: 3 FSLFREMQAKGACP-NQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F LFR ++ + P N + S KCC +L G +H + +G +D +L+ +++D
Sbjct: 97 FRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMD 156
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
LY C+ A ++F+ + D V+WN++ YL RN ++DV+
Sbjct: 157 LYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYL------------RNKRTRDVLVL--- 201
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
+++ ++ C+ +G VT ++ GKQ+H + L
Sbjct: 202 --------FDKMKNDVDGCVKPDG-----VTCLLALQACANLGALDFGKQVHDFIDENGL 248
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+G ++++LV MY +CG DKA + +R N +V W +++SG NG +
Sbjct: 249 SGALNLSNTLVSMYSRCGSMDKAYQVFYG-----MRERN---VVSWTALISGLAMNGFGK 300
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLE----FGRQMHAYIQKIGHRIDAYVG 297
+ ++ F M+ + +T+T ++SAC+++GL+ F +M + KI + Y
Sbjct: 301 EAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHY-- 358
Query: 298 SSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHG 339
++ + ++ LD A+ + + + +P+ +W +++ C +HG
Sbjct: 359 GCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHG 401
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 220/478 (46%), Gaps = 59/478 (12%)
Query: 23 SVFKCCSAEKNLQLGKGVHAWMLRNGVD---ADVVLVNSILDLYLKCKAFEYAERLFELT 79
S+ + CS L K +HA+ LR A + L IL L YA R+F+
Sbjct: 53 SLAETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 109
Query: 80 GEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLF 139
WN +IRA A DV + + A L
Sbjct: 110 ENHSSFMWNTLIRA--CAHDVSR----------------------------KEEAFMLYR 139
Query: 140 CMVENG-TEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKC 198
M+E G + + TF GKQ+H +++ GD ++N+ L+ +Y C
Sbjct: 140 KMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC 199
Query: 199 GRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVD 258
G D A + ++P +V WNSM+ V G+Y+ L+ FR M D
Sbjct: 200 GCLDLARKVFDEMP--------ERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFE-PD 250
Query: 259 IRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRIDAYVGSSLIHMYSKSGSLDDAWV 315
T+ +V+SACA G L G HA++ + + +D V +SLI MY K GSL A
Sbjct: 251 GYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ 310
Query: 316 IFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLN--QGIVPNEVTFLGVINACSHV 373
+F+ + + ++ W +MI G A HG+ ++A + F+ M++ + + PN VTF+G++ AC+H
Sbjct: 311 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 370
Query: 374 GLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKS 433
G + +G YF MM YCI P +EH +VDL RAG + E + + + +W+S
Sbjct: 371 GFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRS 430
Query: 434 FLSS-CRLHKNIEMGKWVSEMLLQVAPSDPE-------AYILLSNMCTSNHRWDEAAM 483
L + C+ ++E+ + ++ ++ + AY+LLS + S RW++ +
Sbjct: 431 LLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGI 488
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 150/354 (42%), Gaps = 52/354 (14%)
Query: 2 VFSLFREMQAKG-ACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
F L+R+M +G + P+++T V K C+ GK VH ++++G DV + N ++
Sbjct: 134 AFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLI 193
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
LY C + A ++F+ E +V+WN MI A + G+ + +L +FR +
Sbjct: 194 HLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM---------- 243
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG---RVI 177
+ E T + LG H R
Sbjct: 244 ----------------------QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC 281
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
+ + D + +SL+EMYCKCG A + + + + WN+M+ G+ +
Sbjct: 282 DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM--------QKRDLASWNAMILGFATH 333
Query: 238 GKYEDCLKTFRSMVHELAIVDIRTVTTV--ISACANAGLLEFGRQMHAYIQK---IGHRI 292
G+ E+ + F MV + V +VT V + AC + G + GRQ + + I +
Sbjct: 334 GRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPAL 393
Query: 293 DAYVGSSLIHMYSKSGSLDDAW-VIFRQINEPNVFLWTSMISGCALHGKGKQAS 345
+ Y ++ + +++G + +A ++ +P+ +W S++ C G + S
Sbjct: 394 EHY--GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELS 445
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 197/380 (51%), Gaps = 10/380 (2%)
Query: 103 SLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCM-VENGTEFSEVTFXXXXXXXX 161
SL +F ++P +++ SWN II R G+ ++++L M E+ + T
Sbjct: 86 SLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACS 145
Query: 162 XXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNS 221
+ G +H + L + F++S+LV MY G+ A + D+P+
Sbjct: 146 ASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVR------- 198
Query: 222 GGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQM 281
V + +M GYV G+ L FR M + +D + +++ AC G L+ G+ +
Sbjct: 199 -DSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSV 257
Query: 282 HAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKG 341
H + + + +G+++ MY K LD A +F ++ +V W+S+I G L G
Sbjct: 258 HGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDV 317
Query: 342 KQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTS 401
+ LF+ ML +GI PN VTFLGV++AC+H GL+E+ YFR+M++ Y I P ++H S
Sbjct: 318 VMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHYAS 376
Query: 402 MVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSD 461
+ D RAG L E + F+ + + +V + LS C+++ N+E+G+ V+ L+Q+ P
Sbjct: 377 VADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRK 436
Query: 462 PEAYILLSNMCTSNHRWDEA 481
Y+ L+ + ++ R+DEA
Sbjct: 437 ASYYVTLAGLYSAAGRFDEA 456
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 141/335 (42%), Gaps = 60/335 (17%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
P+ +TL + + CSA + + G +H L+ G + + + ++++ +Y+ +A +L
Sbjct: 132 PDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKL 191
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
F+ ++P +D V + + G ++ G L
Sbjct: 192 FD-------------------------------DMPVRDSVLYTAMFGGYVQQGEAMLGL 220
Query: 136 ELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG----RVITLALNGDNFINSSL 191
+ M +G V ++ GK +HG R L LN + +++
Sbjct: 221 AMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLN----LGNAI 276
Query: 192 VEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMV 251
+MY KC D A + +N+ R ++ W+S++ GY +G K F M+
Sbjct: 277 TDMYVKCSILDYAHTVF----VNMSRR----DVISWSSLILGYGLDGDVVMSFKLFDEML 328
Query: 252 HELAIVDIRTVTTVISACANAGLLE----FGRQMHAY--IQKIGHRIDAYVGSSLIHMYS 305
E + T V+SACA+ GL+E + R M Y + ++ H +S+ S
Sbjct: 329 KEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHY------ASVADCMS 382
Query: 306 KSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHG 339
++G L++A + +P+ + +++SGC ++G
Sbjct: 383 RAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYG 417
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
++FREM G + + S+ C L+ GK VH W +R + L N+I D+
Sbjct: 220 LAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDM 279
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL 110
Y+KC +YA +F DV++W+ +I Y GDV S +F +
Sbjct: 280 YVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM 327
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 223/465 (47%), Gaps = 48/465 (10%)
Query: 50 DADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRN 109
+ +VV +++ Y+ + AE LF E + V+W +M+ +L G ++ + ++
Sbjct: 107 ERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEM 166
Query: 110 LPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELG 169
+P KD ++ ++I GL + G A E+ M +E S +T+ V+
Sbjct: 167 IPDKDNIARTSMIHGLCKEGRVDEAREIFDEM----SERSVITWTTMVTGYGQNNRVDDA 222
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
+ ++ + +S++ Y + GR + A + + +P+ ++ N+
Sbjct: 223 R----KIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVK--------PVIACNA 270
Query: 230 MVSGYVWNGKYEDCLKTFRSM-------------VH-----ELAIVDI------------ 259
M+SG G+ + F SM +H EL +D+
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Query: 260 -RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFR 318
T+ +++S CA+ L G+Q+HA + + +D YV S L+ MY K G L + +IF
Sbjct: 331 FPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFD 390
Query: 319 QINEPNVFLWTSMISGCALHGKGKQASSLF-EGMLNQGIVPNEVTFLGVINACSHVGLLE 377
+ ++ +W S+ISG A HG G++A +F E L+ PNEVTF+ ++ACS+ G++E
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVE 450
Query: 378 EGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSS 437
EG + M+ V+ + P H MVD+ GRAG E I + +VW S L +
Sbjct: 451 EGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Query: 438 CRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
CR H +++ ++ ++ L+++ P + YILLSNM S RW + A
Sbjct: 511 CRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVA 555
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 182/410 (44%), Gaps = 31/410 (7%)
Query: 35 QLGKGVHAWMLRNGVDADVVLV-NSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRA 93
++GK A L + D+ + NS++ Y A +LF+ + ++++WN ++
Sbjct: 29 RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSG 88
Query: 94 YLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTF 153
Y+ G+++++ +F +P ++VVSW ++ G + G A L + M E ++V++
Sbjct: 89 YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSW 144
Query: 154 XXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPL 213
++ +L+ + + DN +S++ CK GR D+A I ++
Sbjct: 145 TVMLIGFLQDGRIDDACKLY----EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEM-- 198
Query: 214 NLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAG 273
+ ++ W +MV+GY N + +D K F M + + + T+++ G
Sbjct: 199 ------SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV----SWTSMLMGYVQNG 248
Query: 274 LLEFGRQMHAYIQKIGHRIDAYVG-SSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMI 332
+E ++ + + + +++I + G + A +F + E N W ++I
Sbjct: 249 RIEDAEELFEVMP-----VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303
Query: 333 SGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYC- 391
+G +A LF M QG+ P T + +++ C+ + L G + V C
Sbjct: 304 KIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL--VRCQ 361
Query: 392 INPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH 441
+ V + ++ +Y + G L+++K IF+ S +W S +S H
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSK-LIFDRFPSKDIIMWNSIISGYASH 410
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
LF MQ +G P TL S+ C++ +L GK VHA ++R D DV + + ++ +
Sbjct: 316 LDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTM 375
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN--T 120
Y+KC ++ +F+ D++ WN +I Y G E++L +F +P N T
Sbjct: 376 YIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVT 435
Query: 121 IIDGLIRCGY 130
+ L C Y
Sbjct: 436 FVATLSACSY 445
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 191/408 (46%), Gaps = 29/408 (7%)
Query: 92 RAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEV 151
RAY G + SL +F D+ + I+ G + +A L ++ + +E
Sbjct: 72 RAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEF 131
Query: 152 TFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDV 211
TF + GK +H V+ L D ++ + LV++Y K G A + +
Sbjct: 132 TFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 212 PLNLL-----------RTGN------------SGGIVPWNSMVSGYVWNGKYEDCLKTFR 248
P L + GN IV WN M+ GY +G D L F+
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 249 SMVHE-LAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKS 307
++ E D TV +SAC+ G LE GR +H +++ R++ V + LI MYSK
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 308 GSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLN-QGIVPNEVTFLGV 366
GSL++A ++F ++ W +MI+G A+HG + A LF M G+ P ++TF+G
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 367 INACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISH 426
+ AC+H GL+ EG F M Y I P +EH +V L GRAG L I +
Sbjct: 368 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDA 427
Query: 427 LTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTS 474
+ +W S L SC+LH + +GK ++E L+ + + Y+LLSN+ S
Sbjct: 428 DSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYAS 475
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 198/403 (49%), Gaps = 26/403 (6%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F L+ ++ + PN++T SS+ K CS + GK +H +L+ G+ D + ++D+
Sbjct: 115 FLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDV 170
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y K A+++F+ E +V+ MI Y G+VE + +F ++ +D+VSWN +I
Sbjct: 171 YAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMI 230
Query: 123 DGLIRCGYERRALELLFCMVENG-TEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
DG + G+ AL L ++ G + E+T +E G+ +H V + +
Sbjct: 231 DGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRI 290
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE 241
+ + + L++MY KCG ++A ++ D P IV WN+M++GY +G +
Sbjct: 291 RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK--------DIVAWNAMIAGYAMHGYSQ 342
Query: 242 DCLKTFRSM--VHELAIVDIRTVTTVISACANAGLLEFG-RQMHAYIQKIGHRIDAYVGS 298
D L+ F M + L DI + T + ACA+AGL+ G R + Q+ G +
Sbjct: 343 DALRLFNEMQGITGLQPTDITFIGT-LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYG 401
Query: 299 SLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGK---GKQASSLFEGMLNQ 354
L+ + ++G L A+ + +N + + LW+S++ C LHG GK+ + G LN
Sbjct: 402 CLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIG-LN- 459
Query: 355 GIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCIN-PGV 396
+ N ++ + N + VG E + +MK+ + PG+
Sbjct: 460 --IKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 197/438 (44%), Gaps = 54/438 (12%)
Query: 46 RNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLD 105
R V+A L + I DL E+ ER + +VV+WN MI+AYL GDV +
Sbjct: 248 RGQVEAARCLFDQIPDLCGDDHGGEFRERFCK-----NVVSWNSMIKAYLKVGDVVSARL 302
Query: 106 MFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXX 165
+F + +D +SWNT+IDG + A L FSE+
Sbjct: 303 LFDQMKDRDTISWNTMIDGYVHVSRMEDAFAL----------FSEMP------------- 339
Query: 166 VELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIV 225
N D + +V Y G + A + P V
Sbjct: 340 ----------------NRDAHSWNMMVSGYASVGNVELARHYFEKTP--------EKHTV 375
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI 285
WNS+++ Y N Y++ + F M E D T+T+++SA L G QMH +
Sbjct: 376 SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIV 435
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQA 344
K D V ++LI MYS+ G + ++ IF ++ + V W +MI G A HG +A
Sbjct: 436 VKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEA 494
Query: 345 SSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVD 404
+LF M + GI P+ +TF+ V+NAC+H GL++E F M VY I P +EH +S+V+
Sbjct: 495 LNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVN 554
Query: 405 LYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEA 464
+ G E I +VW + L +CR++ N+ + +E + ++ P
Sbjct: 555 VTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTP 614
Query: 465 YILLSNMCTSNHRWDEAA 482
Y+LL NM WDEA+
Sbjct: 615 YVLLYNMYADMGLWDEAS 632
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 173/374 (46%), Gaps = 27/374 (7%)
Query: 15 CPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGV-DADVVLVNSILDLYLKCKAFEYAE 73
C N + +S+ K L++G V A +L + + D D + N+++D Y+ E A
Sbjct: 278 CKNVVSWNSMIKAY-----LKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAF 332
Query: 74 RLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERR 133
LF D +WN+M+ Y G+VE + F P K VSWN+II + +
Sbjct: 333 ALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKE 392
Query: 134 ALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVE 193
A++L M G + T + LG Q+H V+ + D ++++L+
Sbjct: 393 AVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALIT 451
Query: 194 MYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHE 253
MY +CG ++ I ++ L ++ WN+M+ GY ++G + L F SM
Sbjct: 452 MYSRCGEIMESRRIFDEMKLKR-------EVITWNAMIGGYAFHGNASEALNLFGSMKSN 504
Query: 254 LAIVDIRTVTTVISACANAGLL-----EFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSG 308
T +V++ACA+AGL+ +F M Y KI +++ Y SSL+++ S G
Sbjct: 505 GIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVY--KIEPQMEHY--SSLVNVTSGQG 560
Query: 309 SLDDA-WVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT-FLGV 366
++A ++I EP+ +W +++ C ++ A E M + P T ++ +
Sbjct: 561 QFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAM--SRLEPESSTPYVLL 618
Query: 367 INACSHVGLLEEGS 380
N + +GL +E S
Sbjct: 619 YNMYADMGLWDEAS 632
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 179/432 (41%), Gaps = 51/432 (11%)
Query: 52 DVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDV---EKSLDMFR 108
+ V N+++ Y+K + A +LF++ + DVVTWN MI Y+ G + E++ +F
Sbjct: 70 NTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFD 129
Query: 109 NLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVE---------------NGTEFSEVTF 153
+PS+D SWNT+I G + AL L M E NG S V
Sbjct: 130 EMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVL 189
Query: 154 XXXXXXXXXXXXVEL------------GKQLHGRVITLALNGDNFINS--SLVEMYCKCG 199
L + G+ +L ++ + + +L+ Y + G
Sbjct: 190 FRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRG 249
Query: 200 RTDKASVILKDVPLNLLRTGNSG--------GIVPWNSMVSGYVWNGKYEDCLKTFRSMV 251
+ + A + +P +L + G +V WNSM+ Y+ G + + R +
Sbjct: 250 QVEAARCLFDQIP-DLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGD----VVSARLLF 304
Query: 252 HELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLD 311
++ D + T+I + +E A ++ +R DA+ + ++ Y+ G+++
Sbjct: 305 DQMKDRDTISWNTMIDGYVHVSRME---DAFALFSEMPNR-DAHSWNMMVSGYASVGNVE 360
Query: 312 DAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACS 371
A F + E + W S+I+ + K+A LF M +G P+ T +++A +
Sbjct: 361 LARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST 420
Query: 372 HVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVW 431
+ L G +++ V + P V +++ +Y R G ++E++ E + W
Sbjct: 421 GLVNLRLGMQMHQIV--VKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITW 478
Query: 432 KSFLSSCRLHKN 443
+ + H N
Sbjct: 479 NAMIGGYAFHGN 490
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 158/405 (39%), Gaps = 75/405 (18%)
Query: 56 VNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV 115
N L+ ++ A +FE + VTWN MI Y+ ++ ++ +F +P +DV
Sbjct: 43 TNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV 102
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
V+WNT+I G + CG G F E +L ++ R
Sbjct: 103 VTWNTMISGYVSCG---------------GIRFLE-------------EARKLFDEMPSR 134
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
D+F ++++ Y K R +A ++ + +P V W++M++G+
Sbjct: 135 --------DSFSWNTMISGYAKNRRIGEALLLFEKMP--------ERNAVSWSAMITGFC 178
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISA-CANAGLLEFGRQMHAYIQKIGHRID- 293
NG+ + + FR M + D + +++ N L E + Y + R D
Sbjct: 179 QNGEVDSAVVLFRKM----PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDL 234
Query: 294 AYVGSSLIHMYSKSGSLDDAWVIFRQINE---------------PNVFLWTSMISGCALH 338
Y ++LI Y + G ++ A +F QI + NV W SMI
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 339 GKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH 398
G A LF+ M ++ + +++ +I+ HV +E+ F M N
Sbjct: 295 GDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMP-----NRDAHS 345
Query: 399 CTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKN 443
MV Y G +E FE T W S +++ +K+
Sbjct: 346 WNMMVSGYASVGN-VELARHYFEKTPEKHTVSWNSIIAAYEKNKD 389
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF M +G P+ +TL+S+ + NL+LG +H +++ V DV + N+++ +Y
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYS 454
Query: 65 KCKAFEYAERLF-ELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV 115
+C + R+F E+ + +V+TWN MI Y G+ ++L++F ++ S +
Sbjct: 455 RCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGI 506
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 10/365 (2%)
Query: 118 WNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
WN I+ IR A+++ MV + + LGK+LH +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
L GD F S + +YCK G + A + + P L + WN+++ G
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGS--------WNAIIGGLNHA 196
Query: 238 GKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI--QKIGHRIDAY 295
G+ + ++ F M D T+ +V ++C G L Q+H + K + D
Sbjct: 197 GRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIM 256
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG 355
+ +SLI MY K G +D A IF ++ + NV W+SMI G A +G +A F M G
Sbjct: 257 MLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFG 316
Query: 356 IVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET 415
+ PN++TF+GV++AC H GL+EEG TYF MMK + + PG+ H +VDL R G L E
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEA 376
Query: 416 KNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSN 475
K + E + VW + C ++EM +WV+ ++++ P + Y++L+N+
Sbjct: 377 KKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALR 436
Query: 476 HRWDE 480
W +
Sbjct: 437 GMWKD 441
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 143/336 (42%), Gaps = 49/336 (14%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
P++Y+L V K + LGK +H+ +R G D E+ E
Sbjct: 115 PDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGD-----------------EFCESG 157
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
F I Y AG+ E + +F P + + SWN II GL G A+
Sbjct: 158 F--------------ITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 136 ELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL--NGDNFINSSLVE 193
E+ M +G E + T + L QLH V+ D + +SL++
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 194 MYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHE 253
MY KCGR D AS I ++ +R N +V W+SM+ GY NG + L+ FR M
Sbjct: 264 MYGKCGRMDLASHIFEE-----MRQRN---VVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 254 LAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS----LIHMYSKSGS 309
+ T V+SAC + GL+E G+ Y + + G S ++ + S+ G
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGK---TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQ 372
Query: 310 LDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQA 344
L +A + ++ +PNV +W ++ GC G + A
Sbjct: 373 LKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVD--ADVVLVNSILDL 62
+F +M+ G P+ +T+ SV C +L L +H +L+ + +D++++NS++D+
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL 110
Y KC + A +FE + +VV+W+ MI Y G+ ++L+ FR +
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM 312
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 181/371 (48%), Gaps = 11/371 (2%)
Query: 100 VEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXX 159
EK + F+ + + + GL G + A+ LL+ +G + T+
Sbjct: 61 AEKRIGRFQVENQRKTEKLDKTLKGLCVTGRLKEAVGLLW---SSGLQVEPETYAVLLQE 117
Query: 160 XXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTG 219
GK++H ++ + + ++ L+ +Y G A ++ + + +
Sbjct: 118 CKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIR----- 172
Query: 220 NSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGR 279
++PWN+M+SGYV G ++ L + M + D T +V AC+ LE G+
Sbjct: 173 ---DLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 229
Query: 280 QMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHG 339
+ HA + K + + V S+L+ MY K S D +F Q++ NV WTS+ISG HG
Sbjct: 230 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 289
Query: 340 KGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHC 399
K + FE M +G PN VTFL V+ AC+H GL+++G +F MK Y I P +H
Sbjct: 290 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHY 349
Query: 400 TSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAP 459
+MVD GRAG L E F+ ++ VW S L +CR+H N+++ + + L++ P
Sbjct: 350 AAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDP 409
Query: 460 SDPEAYILLSN 470
++ Y++ +N
Sbjct: 410 TNGGNYVVFAN 420
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 165/377 (43%), Gaps = 52/377 (13%)
Query: 20 TLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELT 79
T + + + C K GK +HA M +V L+ YLK K
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMF---------VVGFALNEYLKVK------------ 148
Query: 80 GEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLF 139
++ Y +GD++ + +FR+L +D++ WN +I G ++ G E+ L + +
Sbjct: 149 ----------LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYY 198
Query: 140 CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG 199
M +N + TF +E GK+ H +I + + ++S+LV+MY KC
Sbjct: 199 DMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCS 258
Query: 200 RTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDI 259
+ + L T N ++ W S++SGY ++GK + LK F M E +
Sbjct: 259 SFSDGHRV-----FDQLSTRN---VITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNP 310
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVG--SSLIHMYSKSGSLDDAW-VI 316
T V++AC + GL++ G + H Y K + I+ ++++ ++G L +A+ +
Sbjct: 311 VTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFV 369
Query: 317 FRQINEPNVFLWTSMISGCALHGKGK----QASSLFEGMLNQGIVPNEVTFLGVINACSH 372
+ + + +W S++ C +HG K A+ E L+ N V F +C
Sbjct: 370 MKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLE--LDPTNGGNYVVFANGYASC-- 425
Query: 373 VGLLEEGSTYFRMMKDV 389
GL E S R M++
Sbjct: 426 -GLREAASKVRRKMENA 441
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 62/106 (58%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
++ +M+ P+QYT +SVF+ CSA L+ GK HA M++ + +++++ ++++D+Y
Sbjct: 196 IYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYF 255
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL 110
KC +F R+F+ +V+TW +I Y G V + L F +
Sbjct: 256 KCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKM 301
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 227/473 (47%), Gaps = 43/473 (9%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
+F ++ M+ +G N T + + CS ++ + GK +H+ ++++G + + V
Sbjct: 197 LFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFV----- 251
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
N+++ Y GD+ S+ F +P KDV+SWN+I
Sbjct: 252 -------------------------ANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSI 286
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
+ G +L+L M G S F ++ GKQ+H V+ +
Sbjct: 287 VSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF 346
Query: 182 NGDNF-INSSLVEMYCKCGRTDKASVILKDVP-LNLLRTGNSGGIVPWNSMVSGYVWNGK 239
+ + + S+L++MY KC + ++++ + +P LNL NS+++ + G
Sbjct: 347 DVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNL---------ECCNSLMTSLMHCGI 397
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANA--GLLEFGRQMHAYIQKIGHRIDAYVG 297
+D ++ F M+ E +D T++TV+ A + + L +H K G+ D V
Sbjct: 398 TKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVS 457
Query: 298 SSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV 357
SLI Y+KSG + + +F +++ PN+F TS+I+G A +G G + M ++
Sbjct: 458 CSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLI 517
Query: 358 PNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKN 417
P+EVT L V++ CSH GL+EEG F ++ Y I+PG + MVDL GRAG + + +
Sbjct: 518 PDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAER 577
Query: 418 FIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSN 470
+ + W S L SCR+H+N +G+ +E+L+ + P + YI +S
Sbjct: 578 LLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSK 630
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 148/330 (44%), Gaps = 17/330 (5%)
Query: 84 VVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVE 143
V T N I + +G++ + + F + +DVV++N +I G R G RA+EL MV
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 144 NGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDK 203
G S TF G Q+H RVI+L + F+ S+LV +Y
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLY-------- 157
Query: 204 ASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVT 263
A + L DV L L + N ++ + G+ + + + M E + T
Sbjct: 158 ACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYC 217
Query: 264 TVISACANAGLLEFGRQMHAYIQKIGHRI-DAYVGSSLIHMYSKSGSLDDAWVIFRQINE 322
+I C++ L+ G+Q+H+ + K G I + +V + L+ YS G L + F + E
Sbjct: 218 YMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPE 277
Query: 323 PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGST- 381
+V W S++S CA +G + LF M G P+ F+ +N CS ++ G
Sbjct: 278 KDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQI 337
Query: 382 ---YFRMMKDVYCINPGVEHCTSMVDLYGR 408
+M DV ++ ++++D+YG+
Sbjct: 338 HCYVLKMGFDVSSLHVQ----SALIDMYGK 363
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 110/235 (46%), Gaps = 17/235 (7%)
Query: 224 IVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIR----TVTTVISACANAGLLEFGR 279
+V +N ++SG N +Y L+ + E+ +R T +V+S C++ G
Sbjct: 77 VVTYNLLISG---NSRYGCSLRAIE-LYAEMVSCGLRESASTFPSVLSVCSDELFCREGI 132
Query: 280 QMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHG 339
Q+H + +G + +V S+L+ +Y+ +D A +F ++ + N+ + ++ G
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG 192
Query: 340 KGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRM-------MKDVYCI 392
+ K+ ++ M +G+ N +T+ +I CSH L+ EG + + +++
Sbjct: 193 ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVA 252
Query: 393 NPGVEHCTSMVDLYG--RAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIE 445
N V++ ++ DL G R+ + K+ I N I + + + S L S L ++
Sbjct: 253 NVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQ 307
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 171/322 (53%), Gaps = 15/322 (4%)
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
G+Q+H V L N I +SLV Y G D A + + P IV W
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETP-------EKQNIVLWT 136
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
+M+S Y N + ++ F+ M E +D VT +SACA+ G ++ G ++++ K
Sbjct: 137 AMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKR 196
Query: 289 GHRI--DAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
R+ D + +SL++MY KSG + A +F + +V +TSMI G AL+G+ +++
Sbjct: 197 KRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLE 256
Query: 347 LFEGM--LNQG----IVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCT 400
LF+ M ++Q I PN+VTF+GV+ ACSH GL+EEG +F+ M Y + P H
Sbjct: 257 LFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFG 316
Query: 401 SMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPS 460
MVDL+ R+G L + FI + I T +W++ L +C LH N+E+G+ V + ++
Sbjct: 317 CMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRD 376
Query: 461 DPEAYILLSNMCTSNHRWDEAA 482
Y+ LSN+ S WDE +
Sbjct: 377 HVGDYVALSNIYASKGMWDEKS 398
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNG--VDADVVLVNSILDL 62
LF+ M+A+ + ++ C+ +Q+G+ +++ ++ + D+ L NS+L++
Sbjct: 154 LFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNM 213
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y+K E A +LF+ + DV T+ MI Y G ++SL++F+ + + D S +T+I
Sbjct: 214 YVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTID-QSQDTVI 272
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 211/470 (44%), Gaps = 57/470 (12%)
Query: 38 KGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGA 97
K ++A ++ +G+ +V ++D K + +YA RLF +V +N +IRAY
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAY--- 83
Query: 98 GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYE--RRALELLFCMVENGTEFSEVTFXX 155
+ N++ +IR + R++ EL TF
Sbjct: 84 -------------------THNSLYCDVIRIYKQLLRKSFELP----------DRFTFPF 114
Query: 156 XXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKD----- 210
LGKQ+HG + ++L++MY K A + +
Sbjct: 115 MFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERD 174
Query: 211 -VPLNLLRTGNS-----------------GGIVPWNSMVSGYVWNGKYEDCLKTFRSMVH 252
+ N L +G + IV W +M+SGY G Y + + FR M
Sbjct: 175 VISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL 234
Query: 253 ELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDD 312
D ++ +V+ +CA G LE G+ +H Y ++ G V ++LI MYSK G +
Sbjct: 235 AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQ 294
Query: 313 AWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSH 372
A +F Q+ +V W++MISG A HG A F M + PN +TFLG+++ACSH
Sbjct: 295 AIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSH 354
Query: 373 VGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWK 432
VG+ +EG YF MM+ Y I P +EH ++D+ RAG L + + +W
Sbjct: 355 VGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWG 414
Query: 433 SFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
S LSSCR N+++ + L+++ P D Y+LL+N+ +W++ +
Sbjct: 415 SLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVS 464
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 165/343 (48%), Gaps = 15/343 (4%)
Query: 2 VFSLFREMQAKG-ACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
V +++++ K P+++T +FK C++ + LGK VH + + G VV N+++
Sbjct: 92 VIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALI 151
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
D+Y+K A ++F+ E DV++WN ++ Y G ++K+ +F + K +VSW
Sbjct: 152 DMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTA 211
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+I G G A++ M G E E++ +ELGK +H
Sbjct: 212 MISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRG 271
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
+ ++L+EMY KCG +A + L ++ W++M+SGY ++G
Sbjct: 272 FLKQTGVCNALIEMYSKCGVISQA--------IQLFGQMEGKDVISWSTMISGYAYHGNA 323
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ---KIGHRIDAYVG 297
++TF M + T ++SAC++ G+ + G + ++ +I +I+ Y
Sbjct: 324 HGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHY-- 381
Query: 298 SSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHG 339
LI + +++G L+ A I + + +P+ +W S++S C G
Sbjct: 382 GCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPG 424
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 234/491 (47%), Gaps = 57/491 (11%)
Query: 3 FSLFREM--QAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVD-ADVVLVNSI 59
LF+EM +AK P+ T++SV K C+ +++ +G+ VH + +R G D ADV + NS+
Sbjct: 210 LKLFKEMVHEAKTE-PDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSL 268
Query: 60 LDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN 119
+D+Y K DV+ + +F +++VSWN
Sbjct: 269 IDMYSK-------------------------------GFDVDSAFRVFDETTCRNIVSWN 297
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
+I+ G + ALE+ MV+ E EVT K +HG +I
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR 357
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
+ SSL++ Y C D A +L + +V ++M+SG G+
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYK--------DVVSCSTMISGLAHAGR 409
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI-DAYVGS 298
++ + F H + TV ++++AC+ + L + H + I D VG+
Sbjct: 410 SDEAISIF---CHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGT 466
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
S++ Y+K G+++ A F QI E N+ WT +IS A++G +A +LF+ M +G P
Sbjct: 467 SIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTP 526
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFR-MMKDVYCINPGVEHCTSMVDLYGRAGCLIETKN 417
N VT+L ++AC+H GL+++G F+ M+++ + P ++H + +VD+ RAG I+T
Sbjct: 527 NAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH--KPSLQHYSCIVDMLSRAG-EIDTAV 583
Query: 418 FIFEN---GISHLTSVWKSFLSSC--RLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMC 472
+ +N + S W + LS C R K I + V+E +L++ P Y+L S+
Sbjct: 584 ELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAE-VLELEPLCSSGYLLASSTF 642
Query: 473 TSNHRWDEAAM 483
+ W++ AM
Sbjct: 643 AAEKSWEDVAM 653
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 206/474 (43%), Gaps = 51/474 (10%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQL-GKGVHAWMLRNGVDADVVLVNSILDLYL 64
F +++ G PN TL V C ++L G+ +H +++R+G + NSIL +Y
Sbjct: 115 FSKLRVWGFEPNTSTLVLVIHAC---RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYA 171
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
+ A +LF+ E DV++W+++IR+Y+ + + L +F+ +
Sbjct: 172 DSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEM-------------- 216
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN-G 183
+ E TE VT +++G+ +HG I +
Sbjct: 217 ----------------VHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA 260
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
D F+ +SL++MY K D A + + IV WNS+++G+V N +Y++
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCR--------NIVSWNSILAGFVHNQRYDEA 312
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
L+ F MV E VD TV +++ C + +H I + G+ + SSLI
Sbjct: 313 LEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDA 372
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
Y+ +DDA + + +V ++MISG A G+ +A S+F M + PN +T
Sbjct: 373 YTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITV 429
Query: 364 LGVINACSHVGLLEEGS-TYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
+ ++NACS L + ++ IN + TS+VD Y + G IE F+
Sbjct: 430 ISLLNACSVSADLRTSKWAHGIAIRRSLAIND-ISVGTSIVDAYAKCGA-IEMARRTFDQ 487
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNH 476
W +S+ ++ + + + + Q + P A L+ + NH
Sbjct: 488 ITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYT-PNAVTYLAALSACNH 540
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 133/279 (47%), Gaps = 13/279 (4%)
Query: 94 YLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTF 153
Y+ GD+ L F + S+D VSWN I+ GL+ G+E L + G E + T
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 154 XXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPL 213
G+++HG VI G + + +S++ MY D S+ +
Sbjct: 131 VLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMY-----ADSDSLSAR---- 179
Query: 214 NLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI-VDIRTVTTVISACANA 272
L + ++ W+ ++ YV + + LK F+ MVHE D TVT+V+ AC
Sbjct: 180 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVM 239
Query: 273 GLLEFGRQMHAYIQKIGHRI-DAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSM 331
++ GR +H + + G + D +V +SLI MYSK +D A+ +F + N+ W S+
Sbjct: 240 EDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSI 299
Query: 332 ISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINAC 370
++G + + +A +F M+ + + +EVT + ++ C
Sbjct: 300 LAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 224/484 (46%), Gaps = 50/484 (10%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAE-KNLQLGKGVHAWMLRNG-VDADVVLVNSILDL 62
L +EM G P ++S+ C+ + ++ + HA +L + + V+L +++D+
Sbjct: 135 LIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDM 194
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV----VSW 118
YLK A +F+ + V+W MI + + E +D+FR + +++ V+
Sbjct: 195 YLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTL 254
Query: 119 NTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVIT 178
+++ + Y G+ L K++HG
Sbjct: 255 LSVLPACVELNY--------------GSS--------------------LVKEIHGFSFR 280
Query: 179 LALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG 238
+ D + ++ + MYC+CG + V L T +V W+SM+SGY G
Sbjct: 281 HGCHADERLTAAFMTMYCRCGNVSLSRV--------LFETSKVRDVVMWSSMISGYAETG 332
Query: 239 KYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
+ + M E + T+ ++SAC N+ LL F +H+ I K G +G+
Sbjct: 333 DCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGN 392
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
+LI MY+K GSL A +F ++ E ++ W+SMI+ LHG G +A +F+GM+ G
Sbjct: 393 ALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEV 452
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
+++ FL +++AC+H GL+EE T F Y + +EH ++L GR G + +
Sbjct: 453 DDMAFLAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGRFGKIDDAFEV 511
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEM-GKWVSEMLLQVAPSDPEAYILLSNMCTSNHR 477
+ +W S LS+C H +++ GK ++ L++ P +P Y+LLS + T +
Sbjct: 512 TINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGN 571
Query: 478 WDEA 481
+ A
Sbjct: 572 YHAA 575
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 149/367 (40%), Gaps = 43/367 (11%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNL--QLGKGVHAWMLRNGVDADVVLVNS 58
M LFR MQ + PN+ TL SV C E N L K +H + R+G AD L +
Sbjct: 234 MGVDLFRAMQRENLRPNRVTLLSVLPAC-VELNYGSSLVKEIHGFSFRHGCHADERLTAA 292
Query: 59 ILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSW 118
+ +Y +C + LFE + DVV W+ MI Y GD + +++
Sbjct: 293 FMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQ--------- 343
Query: 119 NTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVIT 178
M + G E + VT + +H +++
Sbjct: 344 ----------------------MRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILK 381
Query: 179 LALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG 238
+ ++L++MY KCG A + ++ +V W+SM++ Y +G
Sbjct: 382 CGFMSHILLGNALIDMYAKCGSLSAAREVFYEL--------TEKDLVSWSSMINAYGLHG 433
Query: 239 KYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
+ L+ F+ M+ VD ++SAC +AGL+E + + K + +
Sbjct: 434 HGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYA 493
Query: 299 SLIHMYSKSGSLDDAW-VIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV 357
I++ + G +DDA+ V +P+ +W+S++S C HG+ A + L +
Sbjct: 494 CYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEP 553
Query: 358 PNEVTFL 364
N ++
Sbjct: 554 DNPANYV 560
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 168 LGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPW 227
LG QLH + + D +++SL+ MY K R + ++ L R V +
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEM---LHR-----DTVSY 116
Query: 228 NSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAG-LLEFGRQMHAYIQ 286
S+++ +G + +K + M I V ++++ C G + R HA +
Sbjct: 117 CSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVL 176
Query: 287 KIGHRIDAYV--GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQA 344
+ R+ V ++L+ MY K A+ +F Q+ N WT+MISGC + +
Sbjct: 177 -VDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMG 235
Query: 345 SSLFEGMLNQGIVPNEVTFLGVINAC 370
LF M + + PN VT L V+ AC
Sbjct: 236 VDLFRAMQRENLRPNRVTLLSVLPAC 261
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 18/227 (7%)
Query: 231 VSGYVWNGKYEDCLKTFRSMVHELAIVDIRTV-TTVISACA-NAGLLEFGRQMHAYIQKI 288
+ G V + Y++ L+ ++ +H L + +VI ACA G Q+H K
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
G D V +SLI MY+K +F ++ + + S+I+ C G +A L
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH----CTSMVD 404
+ M G +P ++ C+ +G S RM + ++ ++ T++VD
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMG---SSSKVARMFHALVLVDERMQESVLLSTALVD 193
Query: 405 LY----GRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMG 447
+Y A +N +S W + +S C ++N EMG
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVS-----WTAMISGCVANQNYEMG 235
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 226/497 (45%), Gaps = 72/497 (14%)
Query: 52 DVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP 111
DVV N+++ Y++ E A+ LF E +VVTW M+ Y GDV ++ +F +P
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Query: 112 SKDVVSWNTIIDGLIRCGYERRALELLFCMVE-------NGTEFSEVTFXXXXXXXXXXX 164
+++VSW +I G R AL L M + NG + +
Sbjct: 259 ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFR- 317
Query: 165 XVELGKQLHGRVIT---LALNGDNFINSSLVEMYCKCGRTDKASVILKD--------VPL 213
LG+QLH +VI+ ++ D + SLV MY G A +L + + +
Sbjct: 318 --RLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIII 375
Query: 214 N--------------LLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFR----------- 248
N R + V W SM+ GY+ G F+
Sbjct: 376 NRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWT 435
Query: 249 ----------------SMVHELAIVDIR----TVTTVISACANAGLLEFGRQMHAYIQKI 288
S++ ++ ++ T + ++S+ L+ G+ +H I K
Sbjct: 436 VMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKT 495
Query: 289 G--HRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
+ D + +SL+ MY+K G+++DA+ IF ++ + + W SMI G + HG +A +
Sbjct: 496 TACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALN 555
Query: 347 LFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLY 406
LF+ ML+ G PN VTFLGV++ACSH GL+ G F+ MK+ Y I PG++H SM+DL
Sbjct: 556 LFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLL 615
Query: 407 GRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSE----MLLQVAPSDP 462
GRAG L E + FI + +V+ + L C L+ + + ++E LL++ P +
Sbjct: 616 GRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNA 675
Query: 463 EAYILLSNMCTSNHRWD 479
++ L N+ R D
Sbjct: 676 PGHVALCNVYAGLGRHD 692
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 191/464 (41%), Gaps = 93/464 (20%)
Query: 50 DADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRN 109
+ ++V N++L Y+KC+ A LF + +VV+W +M+ A G E ++++F
Sbjct: 105 ERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-NVVSWTVMLTALCDDGRSEDAVELFDE 163
Query: 110 LPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELG 169
+P ++VVSWNT++ GLIR G +A ++ M V++ +E
Sbjct: 164 MPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV----VSWNAMIKGYIENDGMEEA 219
Query: 170 KQLHGRVITLALNGDNFIN-SSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
K L G ++ N + +S+V YC+ G +A + ++P IV W
Sbjct: 220 KLLFGD-----MSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP--------ERNIVSWT 266
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGL-LEF---GRQMHAY 284
+M+SG+ WN Y + L F M ++ V T + A A GL +EF G Q+HA
Sbjct: 267 AMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQ 326
Query: 285 I-----QKIGHRIDAYVGSSLIHMYS-----------------------------KSGSL 310
+ + + H D + SL+HMY+ K+G L
Sbjct: 327 VISNGWETVDH--DGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDL 384
Query: 311 DDAWVIFRQINE-PNVFLWTSMISGC--------------ALHGKG-------------- 341
+ A +F ++ + WTSMI G LH K
Sbjct: 385 ERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQN 444
Query: 342 ---KQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGS-TYFRMMKDVYCINPGVE 397
+A+SL M+ G+ P T+ ++++ L++G + + K C +P +
Sbjct: 445 ELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLI 504
Query: 398 HCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH 441
S+V +Y + G IE IF + T W S + H
Sbjct: 505 LQNSLVSMYAKCGA-IEDAYEIFAKMVQKDTVSWNSMIMGLSHH 547
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGV--DADVVLVNSILD 61
SL +M G P T S + A NL GK +H + + D D++L NS++
Sbjct: 452 SLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVS 511
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL----PSKDVVS 117
+Y KC A E A +F + D V+WN MI G +K+L++F+ + + V+
Sbjct: 512 MYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVT 571
Query: 118 WNTIIDGLIRCGYERRALELLFCMVE 143
+ ++ G R LEL M E
Sbjct: 572 FLGVLSACSHSGLITRGLELFKAMKE 597
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 226/494 (45%), Gaps = 60/494 (12%)
Query: 25 FKCCSAEK-NLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGD 83
KC S +K L L H LR G + VL S + A R +
Sbjct: 1 MKCLSYQKVRLLLRHCAHRSFLRPGKELHAVLTTS---------GLKKAPRSY------- 44
Query: 84 VVTWNIMIRAYLGAGDVEKSLDMFRNLP--SKDVVSWNTIIDGLIRCGYERRALELLFCM 141
N + + Y +G++ + +F +P KD V W T++ R G +++L M
Sbjct: 45 --LSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEM 102
Query: 142 VENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRT 201
E +V+ + +Q HG + + + + ++L++MY KCG
Sbjct: 103 RRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLV 162
Query: 202 DKASVILKD----------------VPLNLLRTGNS-------GGIVPWNSMVSGYVWNG 238
+ I ++ V L G V W MV+GY+ G
Sbjct: 163 SEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAG 222
Query: 239 KYEDCLKTFRSMV----HELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK----IGH 290
+ L+ MV H L V T+ +++SACA +G L GR +H Y K +G
Sbjct: 223 FTREVLELLAEMVFRCGHGLNFV---TLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGE 279
Query: 291 RI---DAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSL 347
D VG++L+ MY+K G++D + +FR + + NV W ++ SG A+HGKG+ +
Sbjct: 280 EASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDM 339
Query: 348 FEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYG 407
F M+ + + P+++TF V++ACSH G+++EG F ++ Y + P V+H MVDL G
Sbjct: 340 FPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLG 397
Query: 408 RAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYIL 467
RAG + E + + E + V S L SC +H +E+ + + L+Q++P + E IL
Sbjct: 398 RAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQIL 457
Query: 468 LSNMCTSNHRWDEA 481
+SNM + R D A
Sbjct: 458 MSNMYVAEGRSDIA 471
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 173/349 (49%), Gaps = 22/349 (6%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
LF EM+ K + ++ +F C+ ++L + H ++ GV V + N+++D+
Sbjct: 96 MKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDM 155
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC +R+FE E VV+W +++ + +E+ ++F +P ++ V+W ++
Sbjct: 156 YGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMV 215
Query: 123 DGLIRCGYERRALELLFCMV-ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL-- 179
G + G+ R LELL MV G + VT + +G+ +H +
Sbjct: 216 AGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEM 275
Query: 180 -----ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
A D + ++LV+MY KCG D + +N+ R +V WN++ SG
Sbjct: 276 MMGEEASYDDVMVGTALVDMYAKCGNIDSS--------MNVFRLMRKRNVVTWNALFSGL 327
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFG-RQMHAY-IQKIGHRI 292
+GK + F M+ E+ D+ T T V+SAC+++G+++ G R H+ + ++
Sbjct: 328 AMHGKGRMVIDMFPQMIREVKPDDL-TFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKV 386
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGK 340
D Y + ++ + ++G +++A ++ R++ PN + S++ C++HGK
Sbjct: 387 DHY--ACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGK 433
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 202/430 (46%), Gaps = 27/430 (6%)
Query: 78 LTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALEL 137
L+ E V+ + A +GDV+ + L WN +I G +++ +
Sbjct: 36 LSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISV 95
Query: 138 LFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCK 197
M+ G +T+ +LG LH V+ L D FI ++L+ MY
Sbjct: 96 YIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGS 155
Query: 198 CGRTDKASVILKDVPLNLLRTGNS-----------------------GGIVPWNSMVSGY 234
A + ++P L T NS +V W+SM+ GY
Sbjct: 156 FRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGY 215
Query: 235 VWNGKYEDCLKTFRSMVHE-LAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRID 293
V G+Y L+ F M+ + + T+ +VI ACA+ G L G+ +H YI + +
Sbjct: 216 VKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLT 275
Query: 294 AYVGSSLIHMYSKSGSLDDAWVIFRQ--INEPNVFLWTSMISGCALHGKGKQASSLFEGM 351
+ +SLI MY+K GS+ DAW +F + + E + +W ++I G A HG +++ LF M
Sbjct: 276 VILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKM 335
Query: 352 LNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGC 411
I P+E+TFL ++ ACSH GL++E +F+ +K+ P EH MVD+ RAG
Sbjct: 336 RESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGA-EPKSEHYACMVDVLSRAGL 394
Query: 412 LIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNM 471
+ + +FI E I S+ + L+ C H N+E+ + V + L+++ P + Y+ L+N+
Sbjct: 395 VKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANV 454
Query: 472 CTSNHRWDEA 481
N ++ A
Sbjct: 455 YAINKQFRAA 464
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 182/368 (49%), Gaps = 11/368 (2%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
S++ +M G P+ T + K S N +LG +H ++++G++ D+ + N+++ +Y
Sbjct: 94 SVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMY 153
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIID 123
+ A +LF+ ++VTWN ++ AY +GDV + +F + +DVV+W+++ID
Sbjct: 154 GSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMID 213
Query: 124 GLIRCGYERRALELLFCMVENG-TEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G ++ G +ALE+ M+ G ++ +EVT + GK +H ++ + L
Sbjct: 214 GYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLP 273
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ +SL++MY KCG A + + + WN+++ G +G +
Sbjct: 274 LTVILQTSLIDMYAKCGSIGDAWSVFYRASV------KETDALMWNAIIGGLASHGFIRE 327
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
L+ F M D T +++AC++ GL++ +++ G + + ++
Sbjct: 328 SLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVD 387
Query: 303 MYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP-NE 360
+ S++G + DA ++ +P + ++++GC HG + A ++ + ++ + P N+
Sbjct: 388 VLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIE--LQPHND 445
Query: 361 VTFLGVIN 368
++G+ N
Sbjct: 446 GRYVGLAN 453
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 201/418 (48%), Gaps = 38/418 (9%)
Query: 100 VEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYE---RRALELLFCMVENGTEFSEVTFXXX 156
+ + +F +P DV+S +I ++ +A + L C+ G +E TF
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCL---GIRPNEFTFGTV 99
Query: 157 XXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDV----- 211
V+LGKQLH + + L + F+ S+++ Y K A D
Sbjct: 100 IGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNV 159
Query: 212 ------------------PLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHE 253
L+L R +V WN+++ G+ G+ E+ + TF M+ E
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLRE 219
Query: 254 -LAIVDIRTVTTVISACANAGLLEFGRQMHA-YIQKIGHRIDAYVGSSLIHMYSKSGSLD 311
+ I + T I+A +N G+ +HA I+ +G R + +V +SLI YSK G+++
Sbjct: 220 GVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNME 279
Query: 312 DAWVIFRQINEP--NVFLWTSMISGCALHGKGKQASSLFEGML-NQGIVPNEVTFLGVIN 368
D+ + F ++ E N+ W SMI G A +G+G++A ++FE M+ + + PN VT LGV+
Sbjct: 280 DSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLF 339
Query: 369 ACSHVGLLEEGSTYFRMMKDVYCINPGV---EHCTSMVDLYGRAGCLIETKNFIFENGIS 425
AC+H GL++EG YF + Y +P + EH MVD+ R+G E + I +
Sbjct: 340 ACNHAGLIQEGYMYFNKAVNDY-DDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 426 HLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAAM 483
WK+ L C++H N + K + +L++ P D +Y++LSN ++ W ++
Sbjct: 399 PGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSL 456
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 190/394 (48%), Gaps = 20/394 (5%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
F+ + G PN++T +V + ++++LGK +H + L+ G+ ++V + +++L+ Y+K
Sbjct: 81 FKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVK 140
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL 125
A R F+ T + +VV+ +I YL + E++L +FR +P + VV+WN +I G
Sbjct: 141 LSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGF 200
Query: 126 IRCGYERRALELLFCMVENGTEF-SEVTFXXXXXXXXXXXXVELGKQLHGRVIT-LALNG 183
+ G A+ M+ G +E TF GK +H I L
Sbjct: 201 SQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRF 260
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ F+ +SL+ Y KCG + + + + IV WNSM+ GY NG+ E+
Sbjct: 261 NVFVWNSLISFYSKCGNMEDSLLAFNKL------EEEQRNIVSWNSMIWGYAHNGRGEEA 314
Query: 244 LKTFRSMVHELAI-VDIRTVTTVISACANAGLLE-----FGRQMHAYIQKIGHRIDAYVG 297
+ F MV + + + T+ V+ AC +AGL++ F + ++ Y ++ Y
Sbjct: 315 VAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHY-- 372
Query: 298 SSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
+ ++ M S+SG +A + + + +P + W +++ GC +H + A +L +
Sbjct: 373 ACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILE--L 430
Query: 357 VPNEV-TFLGVINACSHVGLLEEGSTYFRMMKDV 389
P +V +++ + NA S + + S R MK+
Sbjct: 431 DPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKET 464
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 212/460 (46%), Gaps = 44/460 (9%)
Query: 15 CPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL--YLKCKAFEYA 72
C + + + C++ K L + +H+ ++ NG+ + N +L + +A
Sbjct: 2 CEKARVIVRMLQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHA 58
Query: 73 ERLFE-LTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYE 131
+ LF+ + WN +IR + + P ++ +N
Sbjct: 59 QLLFDHFDSDPSTSDWNYLIRGFSNSSS-----------PLNSILFYN------------ 95
Query: 132 RRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSL 191
+L V F TF + ++HG VI D + +SL
Sbjct: 96 ----RMLLSSVSRPDLF---TFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSL 148
Query: 192 VEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMV 251
V Y G + AS + ++P+ +V WN M+ + G + L ++ M
Sbjct: 149 VRCYSANGSVEIASKVFDEMPVR--------DLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 252 HELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLD 311
+E D T+ ++S+CA+ L G +H I +V ++LI MY+K GSL+
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 312 DAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACS 371
+A +F + + +V W SMI G +HG G +A S F M+ G+ PN +TFLG++ CS
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 372 HVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVW 431
H GL++EG +F +M + + P V+H MVDLYGRAG L + I+ + +W
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 432 KSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNM 471
++ L SC++H+N+E+G+ + L+Q+ + Y+L++++
Sbjct: 381 RTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSI 420
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
S+++ M +G C + YTL ++ C+ L +G +H ++ V + N+++D+
Sbjct: 193 LSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDM 252
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV 115
Y KC + E A +F + DV+TWN MI Y G +++ FR + + V
Sbjct: 253 YAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGV 305
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 153/272 (56%), Gaps = 10/272 (3%)
Query: 214 NLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIR----TVTTVISAC 269
+LR + ++ WN M+ GYV N +YE+ LK ++M L+ DI+ + + ++AC
Sbjct: 119 KVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM---LSFTDIKPNKFSFASSLAAC 175
Query: 270 ANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWT 329
A G L + +H+ + G ++A + S+L+ +Y+K G + + +F + +V +W
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 330 SMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDV 389
+MI+G A HG +A +F M + + P+ +TFLG++ CSH GLLEEG YF +M
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 390 YCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKW 449
+ I P +EH +MVDL GRAG + E I I +W+S LSS R +KN E+G+
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI 355
Query: 450 VSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
+ L + D Y+LLSN+ +S +W+ A
Sbjct: 356 AIQNLSKAKSGD---YVLLSNIYSSTKKWESA 384
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 146/320 (45%), Gaps = 17/320 (5%)
Query: 21 LSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFE--L 78
L V + C A N + HA + + G L+ S + Y +C A RL L
Sbjct: 33 LKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFL 92
Query: 79 TGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELL 138
+ V N++I + + G+ + + RN ++V++WN +I G +R AL+ L
Sbjct: 93 SLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKAL 152
Query: 139 FCMVE-NGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCK 197
M+ + ++ +F + K +H +I + + ++S+LV++Y K
Sbjct: 153 KNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAK 212
Query: 198 CGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIV 257
CG + + V N + WN+M++G+ +G + ++ F M E
Sbjct: 213 CGDIGTSREVFYSVKRN--------DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSP 264
Query: 258 DIRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRIDAYVGSSLIHMYSKSGSLDDAW 314
D T +++ C++ GLLE G++ + + I +++ Y +++ + ++G + +A+
Sbjct: 265 DSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHY--GAMVDLLGRAGRVKEAY 322
Query: 315 VIFRQIN-EPNVFLWTSMIS 333
+ + EP+V +W S++S
Sbjct: 323 ELIESMPIEPDVVIWRSLLS 342
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 57/111 (51%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
PN+++ +S C+ +L K VH+ M+ +G++ + +L ++++D+Y KC + +
Sbjct: 163 PNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREV 222
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLI 126
F DV WN MI + G +++ +F + ++ V + GL+
Sbjct: 223 FYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLL 273
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 233/542 (42%), Gaps = 100/542 (18%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNL---QLGKGVHAWMLRNGVDADVVLVNSILD 61
LF +M+ +G P + T+S+ C SA N+ + GK HA + NG++ D +L S+L+
Sbjct: 261 LFSDMRKQGVEPTRVTVST---CLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLN 317
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
Y K EYAE +F+ E DVVTWN++I Y+ G VE
Sbjct: 318 FYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVE-------------------- 357
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
D + C R LE L ++ VT ++LGK++ I +
Sbjct: 358 -DAIYMCQLMR--LEKL--------KYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSF 406
Query: 182 NGDNFINSSLVEMYCKCGRTDKA-----SVILKD-------------------------- 210
D + S++++MY KCG A S + KD
Sbjct: 407 ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYG 466
Query: 211 -----VP----------LNLLRTG------------NSGGIVP----WNSMVSGYVWNGK 239
VP L+LLR G S GI+P W +M++G V NG
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY-IQKIGHRIDAYVGS 298
E+ + R M + ++T +SACA+ L GR +H Y I+ + H + +
Sbjct: 527 SEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET 586
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
SL+ MY+K G ++ A +F + L +MIS AL+G K+A +L+ + G+ P
Sbjct: 587 SLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKP 646
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
+ +T V++AC+H G + + F + + P +EH MVDL AG +
Sbjct: 647 DNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRL 706
Query: 419 IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRW 478
I E + +S ++SC + E+ ++S LL+ P + Y+ +SN W
Sbjct: 707 IEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSW 766
Query: 479 DE 480
DE
Sbjct: 767 DE 768
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 205/448 (45%), Gaps = 43/448 (9%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
F EM P+ + + +V K C A K + G+GVH +++++G++ V + +S+ D+Y K
Sbjct: 161 FVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGK 220
Query: 66 CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL 125
C + A ++F+ +P ++ V+WN ++ G
Sbjct: 221 CGVLDDASKVFD-------------------------------EIPDRNAVAWNALMVGY 249
Query: 126 IRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDN 185
++ G A+ L M + G E + VT VE GKQ H I + DN
Sbjct: 250 VQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDN 309
Query: 186 FINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLK 245
+ +SL+ YCK G + A ++ + +V WN ++SGYV G ED +
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRM--------FEKDVVTWNLIISGYVQQGLVEDAIY 361
Query: 246 TFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYS 305
+ M E D T+ T++SA A L+ G+++ Y + D + S+++ MY+
Sbjct: 362 MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 306 KSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLG 365
K GS+ DA +F E ++ LW ++++ A G +A LF GM +G+ PN +T+
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNL 481
Query: 366 VINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIF---EN 422
+I + G ++E F M+ I P + T+M++ + GC E F+ E+
Sbjct: 482 IILSLLRNGQVDEAKDMFLQMQSSGII-PNLISWTTMMNGMVQNGCSEEAILFLRKMQES 540
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWV 450
G+ LS+C ++ +G+ +
Sbjct: 541 GLRPNAFSITVALSACAHLASLHIGRTI 568
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 189/441 (42%), Gaps = 51/441 (11%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNG--VDADVVLVNSIL 60
SL EM + + + C E++L GK +HA +L+NG + + ++
Sbjct: 55 LSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLV 114
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
Y KC A E AE LF L ++V SW
Sbjct: 115 IFYAKCDALEIAEVLFS-------------------------------KLRVRNVFSWAA 143
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
II R G AL M+EN G+ +HG V+
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
L F+ SSL +MY KCG D AS + ++P V WN+++ GYV NGK
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDEIP--------DRNAVAWNALMVGYVQNGKN 255
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
E+ ++ F M + TV+T +SA AN G +E G+Q HA G +D +G+SL
Sbjct: 256 EEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSL 315
Query: 301 IHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
++ Y K G ++ A ++F ++ E +V W +ISG G + A + + M + + +
Sbjct: 316 LNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDC 375
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH----CTSMVDLYGRAGCLIETK 416
VT +++A + L+ G YCI E ++++D+Y + G +++ K
Sbjct: 376 VTLATLMSAAARTENLKLGKEV-----QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK 430
Query: 417 NFIFENGISHLTSVWKSFLSS 437
+F++ + +W + L++
Sbjct: 431 K-VFDSTVEKDLILWNTLLAA 450
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 230/465 (49%), Gaps = 52/465 (11%)
Query: 25 FKCCSAEKNL-QLGKGVHAWMLRNG--VDADVVLVNSILDLYLKCKAFEYAERLFELTGE 81
K CS+ K+L Q+ +H L+N + +++V V+S L L K +A L + +
Sbjct: 20 LKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSS-LSL---AKDLAFARTLLLHSSD 75
Query: 82 GDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCM 141
TWN++ R Y + +S+ ++ + +RR
Sbjct: 76 STPSTWNMLSRGYSSSDSPVESIWVYSEM--------------------KRR-------- 107
Query: 142 VENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRT 201
G + +++TF + G+Q+ V+ + D ++ ++L+ +Y C +T
Sbjct: 108 ---GIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKT 164
Query: 202 DKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRT 261
A + ++ +V WNS+++ V NGK + F M+ + D T
Sbjct: 165 SDARKVFDEM--------TERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETT 216
Query: 262 VTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN 321
+ ++SAC G L G+ +H+ + ++ +G++L+ MY+KSG L+ A ++F ++
Sbjct: 217 MVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMV 274
Query: 322 EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV-PNEVTFLGVINACSHVGLLEEGS 380
+ NV+ W++MI G A +G ++A LF M+ + V PN VTFLGV+ ACSH GL+++G
Sbjct: 275 DKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGY 334
Query: 381 TYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRL 440
YF M+ ++ I P + H +MVD+ GRAG L E +FI + VW++ LS+C +
Sbjct: 335 KYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSI 394
Query: 441 HKNIE---MGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
H + + +G+ V + L+++ P ++++N W EAA
Sbjct: 395 HHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAA 439
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 160/339 (47%), Gaps = 48/339 (14%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
++ EM+ +G PN+ T + K C++ L G+ + +L++G D DV + N+++ LY
Sbjct: 100 VYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYG 159
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
CK A ++F+ E +VV+WN ++ A + G + + F + K T +
Sbjct: 160 TCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVV 219
Query: 125 LIR-CGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
L+ CG + LGK +H +V+ L
Sbjct: 220 LLSACG----------------------------------GNLSLGKLVHSQVMVRELEL 245
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
+ + ++LV+MY K G + A ++ + + + W++M+ G G E+
Sbjct: 246 NCRLGTALVDMYAKSGGLEYARLVFERMV--------DKNVWTWSAMIVGLAQYGFAEEA 297
Query: 244 LKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV--GSSL 300
L+ F M+ E ++ + T V+ AC++ GL++ G + ++KI H+I + ++
Sbjct: 298 LQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKI-HKIKPMMIHYGAM 356
Query: 301 IHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
+ + ++G L++A+ +++ EP+ +W +++S C++H
Sbjct: 357 VDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+VF F EM K CP++ T+ + C NL LGK VH+ ++ ++ + L +++
Sbjct: 197 LVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALV 254
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNT 120
D+Y K EYA +FE + +V TW+ MI G E++L +F + + V N
Sbjct: 255 DMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNY 314
Query: 121 I 121
+
Sbjct: 315 V 315
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 194/431 (45%), Gaps = 58/431 (13%)
Query: 103 SLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXX 162
SL +FRN ++ N +I GL ++ M+ G + +TF
Sbjct: 79 SLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSK 138
Query: 163 XXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG--------------RTDKASVIL 208
LG+ LH + ++ D+F+ SLV+MY K G R K S+++
Sbjct: 139 LGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILI 198
Query: 209 KDVPLN-------------LLRT---GNSGG----------------------------I 224
+V +N L R+ NSG +
Sbjct: 199 WNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNV 258
Query: 225 VPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY 284
V W ++++G+ G YE + T+ M+ + + T+ V+SAC+ +G L G ++H Y
Sbjct: 259 VSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGY 318
Query: 285 IQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQA 344
I G ++D +G++L+ MY+K G LD A +F +N ++ WT+MI G A+HG+ QA
Sbjct: 319 ILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQA 378
Query: 345 SSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVD 404
F M+ G P+EV FL V+ AC + ++ G +F M+ Y I P ++H +VD
Sbjct: 379 IQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVD 438
Query: 405 LYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEA 464
L GRAG L E + I+ + W + +C+ HK + VS+ LL++ P +
Sbjct: 439 LLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGS 498
Query: 465 YILLSNMCTSN 475
YI L S
Sbjct: 499 YIFLDKTHASK 509
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 172/382 (45%), Gaps = 55/382 (14%)
Query: 13 GACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYA 72
G P++ T V K S LG+ +HA L+N VD D + S++D+Y K ++A
Sbjct: 121 GVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHA 180
Query: 73 ERLFELTG-----------------------------------EGDVVTWNIMIRAYLGA 97
++FE + E + +W+ +I+ Y+ +
Sbjct: 181 FQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDS 240
Query: 98 GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXX 157
G++ ++ +F +P K+VVSW T+I+G + G A+ F M+E G + +E T
Sbjct: 241 GELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVL 300
Query: 158 XXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLR 217
+ G ++HG ++ + D I ++LV+MY KCG D A+ + ++
Sbjct: 301 SACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNM------ 354
Query: 218 TGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEF 277
N I+ W +M+ G+ +G++ ++ FR M++ D V++AC N+ ++
Sbjct: 355 --NHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDL 412
Query: 278 GRQMHAYIQKIGHRIDAYVGSSLIH------MYSKSGSLDDAWVIFRQIN-EPNVFLWTS 330
G + R+D + +L H + ++G L++A + + P++ W +
Sbjct: 413 GLNFFDSM-----RLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAA 467
Query: 331 MISGCALHGKGKQASSLFEGML 352
+ C H ++A S+ + +L
Sbjct: 468 LYRACKAHKGYRRAESVSQNLL 489
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
S + EM KG PN+YT+++V CS L G +H ++L NG+ D + +++D
Sbjct: 277 AISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVD 336
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL 110
+Y KC + A +F D+++W MI+ + G +++ FR +
Sbjct: 337 MYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQM 385
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 101/256 (39%), Gaps = 49/256 (19%)
Query: 210 DVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISAC 269
D L++ R N+++ G N ++E ++ F M+ D T V+ +
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 270 ANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAW--------------- 314
+ G GR +HA K D++V SL+ MY+K+G L A+
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 315 --------------------VIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQ 354
+FR + E N W+++I G G+ +A LFE M +
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK 256
Query: 355 GIVPNEVTFLGVINACSHVGLLEEG-STYFRMMK-----DVYCINPGVEHCTSMVDLYGR 408
N V++ +IN S G E STYF M++ + Y I + C+ G
Sbjct: 257 ----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKS----GA 308
Query: 409 AGCLIETKNFIFENGI 424
G I +I +NGI
Sbjct: 309 LGSGIRIHGYILDNGI 324
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 199/394 (50%), Gaps = 31/394 (7%)
Query: 103 SLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVE-------NGTEFSEVTFXX 155
+L + R +P+ V +NT+I ++ + L F + + N +E T+
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIV-SNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPS 117
Query: 156 XXXXXXXXXX-VELGKQLHGRVITL--ALNGDNFINSSLVEMYCKCGRTDKASVILKDVP 212
G+ LH V+ +N D F+ ++LV Y CG+ +A + + +
Sbjct: 118 LFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERI- 176
Query: 213 LNLLRTGNSGGIVPWNSMVSGYVWNGKY---EDCLKTFRSM---VHELAIVDIRTVTTVI 266
+ WN++++ Y + + E+ L F M +EL++V +I
Sbjct: 177 -------REPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLV------ALI 223
Query: 267 SACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVF 326
+CAN G G H Y+ K ++ +VG+SLI +YSK G L A +F ++++ +V
Sbjct: 224 KSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVS 283
Query: 327 LWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM 386
+ +MI G A+HG G++ L++ +++QG+VP+ TF+ I+ACSH GL++EG F M
Sbjct: 284 CYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSM 343
Query: 387 KDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEM 446
K VY I P VEH +VDL GR+G L E + I + + ++W+SFL S + H + E
Sbjct: 344 KAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFER 403
Query: 447 GKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
G+ + LL + + Y+LLSN+ +RW +
Sbjct: 404 GEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTD 437
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 146/349 (41%), Gaps = 51/349 (14%)
Query: 1 MVFSLFREM---QAKGACPNQYTLSSVFKCCSAEKN-LQLGKGVHAWMLR--NGVDADVV 54
+ FSL+ ++ ++ PN++T S+FK + + G+ +HA +L+ V+ D
Sbjct: 92 LAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRF 151
Query: 55 LVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKD 114
+ +++ Y C A LFE E D
Sbjct: 152 VQAALVGFYANCGKLREARSLFERIRE-------------------------------PD 180
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
+ +WNT++ E+L + +E++ G H
Sbjct: 181 LATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHV 240
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
V+ L + F+ +SL+++Y KCG A + ++ + + +N+M+ G
Sbjct: 241 YVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEM--------SQRDVSCYNAMIRGL 292
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---IGHR 291
+G ++ ++ ++S++ + + D T ISAC+++GL++ G Q+ ++ I +
Sbjct: 293 AVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPK 352
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHG 339
++ Y L+ + +SG L++A +++ +PN LW S + HG
Sbjct: 353 VEHY--GCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 120/257 (46%), Gaps = 29/257 (11%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
KQ+H ++IT+ L+ + S L+ + +S + L++LR + + +N+
Sbjct: 26 KQIHAQIITIGLSHHTYPLSKLLHL---------SSTVCLSYALSILRQIPNPSVFLYNT 76
Query: 230 MVSGYVWNGK----------YEDCLKTFRSMVHELAIVDIRTVTTVISACA-NAGLLEFG 278
++S V N Y+ L + + V T ++ A +A G
Sbjct: 77 LISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEF----TYPSLFKASGFDAQWHRHG 132
Query: 279 RQMHAYIQKIGHRI--DAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCA 336
R +HA++ K + D +V ++L+ Y+ G L +A +F +I EP++ W ++++ A
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYA 192
Query: 337 LHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGS-TYFRMMKDVYCINPG 395
+ + + + PNE++ + +I +C+++G G + ++K+ +N
Sbjct: 193 NSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF 252
Query: 396 VEHCTSMVDLYGRAGCL 412
V TS++DLY + GCL
Sbjct: 253 V--GTSLIDLYSKCGCL 267
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 164/309 (53%), Gaps = 14/309 (4%)
Query: 179 LALNG----DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
LAL G D ++ SSLV +Y G + A + +++P +V W +M+SG+
Sbjct: 145 LALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP--------ERNVVSWTAMISGF 196
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDA 294
+ + CLK + M + + T T ++SAC +G L GR +H +G +
Sbjct: 197 AQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYL 256
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQ 354
++ +SLI MY K G L DA+ IF Q + +V W SMI+G A HG QA LFE M+ +
Sbjct: 257 HISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPK 316
Query: 355 -GIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLI 413
G P+ +T+LGV+++C H GL++EG +F +M + + + P + H + +VDL GR G L
Sbjct: 317 SGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQ 375
Query: 414 ETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCT 473
E I + + +W S L SCR+H ++ G +E L + P ++ L+N+
Sbjct: 376 EALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYA 435
Query: 474 SNHRWDEAA 482
S W EAA
Sbjct: 436 SVGYWKEAA 444
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 171/383 (44%), Gaps = 45/383 (11%)
Query: 17 NQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLF 76
+ Y LSS + C ++ + G G H L+ G +DV L +S++ LY
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRD----------- 167
Query: 77 ELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALE 136
+G+VE + +F +P ++VVSW +I G + L+
Sbjct: 168 --------------------SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLK 207
Query: 137 LLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYC 196
L M ++ ++ ++ TF + G+ +H + + + L I++SL+ MYC
Sbjct: 208 LYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYC 267
Query: 197 KCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI 256
KCG LKD + ++ +V WNSM++GY +G ++ F M+ +
Sbjct: 268 KCGD-------LKDA-FRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGT 319
Query: 257 -VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWV 315
D T V+S+C +AGL++ GR+ + + G + + S L+ + + G L +A
Sbjct: 320 KPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALE 379
Query: 316 IFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN-EVTFLGVINACSHV 373
+ + +PN +W S++ C +HG E L + P+ T + + N + V
Sbjct: 380 LIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLM--LEPDCAATHVQLANLYASV 437
Query: 374 GLLEEGSTYFRMMKDV-YCINPG 395
G +E +T ++MKD NPG
Sbjct: 438 GYWKEAATVRKLMKDKGLKTNPG 460
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 14/225 (6%)
Query: 258 DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF 317
D +++ + +C G H K G D Y+GSSL+ +Y SG +++A+ +F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 318 RQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLE 377
++ E NV WT+MISG A + L+ M PN+ TF +++AC+ G L
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 378 EGSTYFRMMKDVYC--INPGVEH----CTSMVDLYGRAGCLIETKNFIFENGISHLTSVW 431
+G + V+C ++ G++ S++ +Y + G L + IF+ + W
Sbjct: 239 QG-------RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR-IFDQFSNKDVVSW 290
Query: 432 KSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNH 476
S ++ H + E+++ + + P+A L + + H
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRH 335
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ L+ +M+ + PN YT +++ C+ L G+ VH L G+ + + + NS++
Sbjct: 204 ICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLI 263
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK-----DV 115
+Y KC + A R+F+ DVV+WN MI Y G +++++F + K D
Sbjct: 264 SMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDA 323
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENG 145
+++ ++ G + + M E+G
Sbjct: 324 ITYLGVLSSCRHAGLVKEGRKFFNLMAEHG 353
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 204/465 (43%), Gaps = 70/465 (15%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
LF M G PNQ T SV S + L G+ +H +++NG + +VL N+++D
Sbjct: 301 LKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDF 360
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC G++E S F + K++V WN ++
Sbjct: 361 YAKC-------------------------------GNLEDSRLCFDYIRDKNIVCWNALL 389
Query: 123 DGLIRCGYERR----ALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVIT 178
G Y + L L M++ G +E TF EL +QLH ++
Sbjct: 390 SG-----YANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCV---TEL-QQLHSVIVR 440
Query: 179 LALNGDNFINSSLVEMYCKCGRTDKASVIL-------KDVPLN----------------- 214
+ ++++ SSL+ Y K + A ++L VPLN
Sbjct: 441 MGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVK 500
Query: 215 LLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGL 274
L+ T V WN ++ + +E+ ++ F+ M+ D T +++S C+
Sbjct: 501 LISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCD 560
Query: 275 LEFGRQMHAYIQKIGHR-IDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMIS 333
L G +H I K D +V + LI MY K GS+ +F + E N+ WT++IS
Sbjct: 561 LTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALIS 620
Query: 334 GCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCIN 393
+HG G++A F+ L+ G P+ V+F+ ++ AC H G+++EG F+ MKD Y +
Sbjct: 621 CLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVE 679
Query: 394 PGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSC 438
P ++H VDL R G L E ++ I E VW++FL C
Sbjct: 680 PEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 201/471 (42%), Gaps = 81/471 (17%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
FRE+ GA + + V K S K+L + K +H + G+D ++ +VNS++ Y
Sbjct: 202 FFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYG 261
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC AER+F+ G D+V+WN +I A + + K+L +F ++P
Sbjct: 262 KCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP------------- 308
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGD 184
E+G ++ T+ + G+Q+HG +I
Sbjct: 309 ------------------EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETG 350
Query: 185 NFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCL 244
+ ++L++ Y KCG + + + + +R N IV WN+++SGY N CL
Sbjct: 351 IVLGNALIDFYAKCGNLEDSRLC-----FDYIRDKN---IVCWNALLSGYA-NKDGPICL 401
Query: 245 KTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMY 304
F M+ T +T + +C L +Q+H+ I ++G+ + YV SSL+ Y
Sbjct: 402 SLFLQMLQMGFRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSY 457
Query: 305 SKSGSLDDAWVIF--------------------------------RQINEPNVFLWTSMI 332
+K+ ++DA ++ + +P+ W I
Sbjct: 458 AKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAI 517
Query: 333 SGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM--KDVY 390
+ C+ ++ LF+ ML I P++ TF+ +++ CS + L GS+ ++ D
Sbjct: 518 AACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFS 577
Query: 391 CINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH 441
C + V C ++D+YG+ G I + +FE W + +S +H
Sbjct: 578 CADTFV--CNVLIDMYGKCGS-IRSVMKVFEETREKNLITWTALISCLGIH 625
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 161/397 (40%), Gaps = 45/397 (11%)
Query: 23 SVFKCCSAEKNLQLGKGVHAW--MLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTG 80
S+ C + K +HA L + + V + N+I+ LY K A ++F+
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 81 EGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFC 140
E + V++N +I+ Y GDV+K+ +F + + + + GL+ C
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCA----------- 125
Query: 141 MVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL-NGDNFINSSLVEMYCKCG 199
V G QLHG + L D F+ + L+ +Y +
Sbjct: 126 ----------------------SLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLD 163
Query: 200 RTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDI 259
+ A + +D+P L T WN M+S G ++C+ FR +V A +
Sbjct: 164 LLEMAEQVFEDMPFKSLET--------WNHMMSLLGHRGFLKECMFFFRELVRMGASLTE 215
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
+ V+ + L+ +Q+H K G + V +SLI Y K G+ A +F+
Sbjct: 216 SSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQD 275
Query: 320 INEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
++ W ++I A +A LF M G PN+ T++ V+ S V LL G
Sbjct: 276 AGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCG 335
Query: 380 STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
M+ C G+ +++D Y + G L +++
Sbjct: 336 RQIHGMLIKNGC-ETGIVLGNALIDFYAKCGNLEDSR 371
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVD-ADVVLVNSIL 60
V LF+ M P++YT S+ CS +L LG +H + + AD + N ++
Sbjct: 529 VIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLI 588
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS----KDVV 116
D+Y KC + ++FE T E +++TW +I G +++L+ F+ S D V
Sbjct: 589 DMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRV 648
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTE 147
S+ +I+ G + + L M + G E
Sbjct: 649 SFISILTACRHGGMVKEGMGLFQKMKDYGVE 679
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 171/333 (51%), Gaps = 27/333 (8%)
Query: 166 VELGKQLHGRVITLA-LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGI 224
+ +G+ +HG V L L I ++L+ Y K G A + ++P RT
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPE---RTS----- 178
Query: 225 VPWNSMVSGYV-----WNGKYEDCLKTFRSMV---HELAIVDIRTVTTVISACANAGLLE 276
V WN+M+ GY N + FR + D T+ V+SA + GLLE
Sbjct: 179 VTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDT-TMVCVLSAISQTGLLE 237
Query: 277 FGRQMHAYIQKIGH--RIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISG 334
G +H YI+K+G +D ++G++L+ MYSK G L++A+ +F + NVF WTSM +G
Sbjct: 238 IGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATG 297
Query: 335 CALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINP 394
AL+G+G + +L M GI PNE+TF +++A H+GL+EEG F+ MK + + P
Sbjct: 298 LALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTP 357
Query: 395 GVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEML 454
+EH +VDL G+AG + E FI I + +S ++C ++ MG+ + + L
Sbjct: 358 VIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKAL 417
Query: 455 LQVAPSDP-------EAYILLSNMCTSNHRWDE 480
L++ D E Y+ LSN+ +W E
Sbjct: 418 LEIEREDEKLSGSECEDYVALSNVLAHKGKWVE 450
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 27/266 (10%)
Query: 90 MIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYE-------RRALELL--FC 140
++ Y GD+ + +F +P + V+WN +I G C ++ R+A+ L F
Sbjct: 153 LLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY--CSHKDKGNHNARKAMVLFRRFS 210
Query: 141 MVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG--DNFINSSLVEMYCKC 198
+G ++ T +E+G +HG + L D FI ++LV+MY KC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 199 GRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVD 258
G + A + + L++ N + W SM +G NG+ + M +
Sbjct: 271 GCLNNAFSVFE-----LMKVKN---VFTWTSMATGLALNGRGNETPNLLNRMAESGIKPN 322
Query: 259 IRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRIDAYVGSSLIHMYSKSGSLDDAW- 314
T T+++SA + GL+E G ++ ++ + I+ Y ++ + K+G + +A+
Sbjct: 323 EITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHY--GCIVDLLGKAGRIQEAYQ 380
Query: 315 VIFRQINEPNVFLWTSMISGCALHGK 340
I +P+ L S+ + C+++G+
Sbjct: 381 FILAMPIKPDAILLRSLCNACSIYGE 406
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 188/399 (47%), Gaps = 9/399 (2%)
Query: 83 DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMV 142
D + + +++AY AG + ++ +F ++P D+ WN +I G CG+ + + L M
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQ 199
Query: 143 ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTD 202
G + + T + + +H + + L+ +++ +LV MY +C
Sbjct: 200 HRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 203 KASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTV 262
A + + + +V +S+++GY G +++ L F + D V
Sbjct: 260 SACSVFNSI--------SEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLV 311
Query: 263 TTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE 322
V+ +CA G+++H+Y+ ++G +D V S+LI MYSK G L A +F I E
Sbjct: 312 AIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPE 371
Query: 323 PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTY 382
N+ + S+I G LHG A F +L G++P+E+TF ++ C H GLL +G
Sbjct: 372 KNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Query: 383 FRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHK 442
F MK + I P EH MV L G AG L E F+ + + + LS C +H+
Sbjct: 432 FERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHE 491
Query: 443 NIEMGKWVSEMLLQVAPSDPEAY-ILLSNMCTSNHRWDE 480
N + + V+E + + Y ++LSN+ RWDE
Sbjct: 492 NTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDE 530
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 154/381 (40%), Gaps = 52/381 (13%)
Query: 38 KGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGA 97
+ +H+++ ++ + D + Y A +LF++ E V WN +IRAY A
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 98 GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXX 157
L +F + D N L R E + L C
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRC----------------- 127
Query: 158 XXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLR 217
+HG I L D S++V+ Y K G +AS + +P
Sbjct: 128 --------------IHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIP----- 168
Query: 218 TGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEF 277
+ WN M+ GY G ++ + F M H + T+ + S + LL
Sbjct: 169 ---DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLV 225
Query: 278 GRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCAL 337
+HA+ KI +YVG +L++MYS+ + A +F I+EP++ +S+I+G +
Sbjct: 226 AWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSR 285
Query: 338 HGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDV--YCINPG 395
G K+A LF + G P+ V V+ +C+ + G K+V Y I G
Sbjct: 286 CGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSG-------KEVHSYVIRLG 338
Query: 396 VEH----CTSMVDLYGRAGCL 412
+E C++++D+Y + G L
Sbjct: 339 LELDIKVCSALIDMYSKCGLL 359
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 31/149 (20%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF E++ G P+ ++ V C+ + GK VH++++R G++ D+ + ++++D+Y
Sbjct: 295 LFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYS 354
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDG 124
KC + A LF AG +P K++VS+N++I G
Sbjct: 355 KCGLLKCAMSLF--------------------AG-----------IPEKNIVSFNSLILG 383
Query: 125 LIRCGYERRALELLFCMVENGTEFSEVTF 153
L G+ A E ++E G E+TF
Sbjct: 384 LGLHGFASTAFEKFTEILEMGLIPDEITF 412
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 214/465 (46%), Gaps = 39/465 (8%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRN-GVDADVVLVNSILDLYLKCKAFEYAER 74
P YT + C + K+L G + + +L N + + L++ ++ L+ C+ + A +
Sbjct: 131 PEAYT--DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARK 188
Query: 75 LFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRA 134
+F+ + ++T + W + G R G R A
Sbjct: 189 IFDDVTDSSLLTEKV----------------------------WAAMAIGYSRNGSPRDA 220
Query: 135 LELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEM 194
L + M+ + E + + +G+ +H +++ D + + L+++
Sbjct: 221 LIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKL 280
Query: 195 YCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHEL 254
Y + G D A + + + +V WNS++S + + FR M E+
Sbjct: 281 YMESGLFDDARKVFDGM--------SERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEM 332
Query: 255 AIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAW 314
T+TT++ AC+ L G+++HA I K + D + +SL+ MY K G ++ +
Sbjct: 333 IGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSR 392
Query: 315 VIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVG 374
+F + ++ W M++ A++G ++ +LFE M+ G+ P+ +TF+ +++ CS G
Sbjct: 393 RVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTG 452
Query: 375 LLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSF 434
L E G + F MK + ++P +EH +VD+ GRAG + E I S+W S
Sbjct: 453 LTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSL 512
Query: 435 LSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
L+SCRLH N+ +G+ ++ L + P +P Y+++SN+ WD
Sbjct: 513 LNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWD 557
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 67/106 (63%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
+F+LFR+MQ + + TL+++ CS L GK +HA +L++ DV L+NS++D
Sbjct: 321 MFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMD 380
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMF 107
+Y KC EY+ R+F++ D+ +WNIM+ Y G++E+ +++F
Sbjct: 381 MYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLF 426
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 204/410 (49%), Gaps = 28/410 (6%)
Query: 90 MIRAYLGAGDVEKSL----DMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENG 145
++ A+L ++ K +F ++ + ++T+I R L MV+
Sbjct: 49 LLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEE 108
Query: 146 TE---FSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG----DNFINSSLVEMYCKC 198
E S +TF +GKQ+H V+ NG D+ + + ++ +Y +
Sbjct: 109 EEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVK---NGVFLSDSHVQTGVLRIYVED 165
Query: 199 GRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVD 258
A + ++P +V W+ +++GYV G + L+ FR M+ + D
Sbjct: 166 KLLLDARKVFDEIP--------QPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPD 217
Query: 259 IRTVTTVISACANAGLLEFGRQMHAYIQKIGH-RIDAYVGSSLIHMYSKSGSLDDAWVIF 317
+VTT ++ACA G L G+ +H +++K D +VG++L+ MY+K G ++ A +F
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 318 RQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQ-GIVPNEVTFLGVINACSHVGLL 376
+++ NVF W ++I G A +G K+A + E + + GI P+ V LGV+ AC+H G L
Sbjct: 278 KKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFL 337
Query: 377 EEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLS 436
EEG + M+ Y I P EH + +VDL RAG L + N I + + L SVW + L+
Sbjct: 338 EEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLN 397
Query: 437 SCRLHKNIEMGKWVSEMLLQVAPSDPE----AYILLSNMCTSNHRWDEAA 482
CR HKN+E+G+ + LL + + E A + LSN+ S R EA+
Sbjct: 398 GCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAS 447
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 147/343 (42%), Gaps = 48/343 (13%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVD-ADVVLVNSILD 61
F L + + + P+ T + C +GK +H W+++NGV +D + +L
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y++ K A ++F+ +P DVV W+ +
Sbjct: 161 IYVEDKLLLDARKVFD-------------------------------EIPQPDVVKWDVL 189
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA- 180
++G +RCG LE+ M+ G E E + + GK +H V +
Sbjct: 190 MNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSW 249
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
+ D F+ ++LV+MY KCG + A + K + + W +++ GY G
Sbjct: 250 IESDVFVGTALVDMYAKCGCIETAVEVFKKL--------TRRNVFSWAALIGGYAAYGYA 301
Query: 241 EDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQ---KIGHRIDAYV 296
+ + + E I D + V++ACA+ G LE GR M ++ +I + + Y
Sbjct: 302 KKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHY- 360
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
S ++ + ++G LDDA + ++ +P +W ++++GC H
Sbjct: 361 -SCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTH 402
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 197/452 (43%), Gaps = 62/452 (13%)
Query: 90 MIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFS 149
++ Y+ G V + +F +P +D+ +I R GY + +L+ M ++G +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 150 EVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG---------- 199
E GK +H V+ + D FI SSL++MY K G
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 200 ---------------------RTDKASVILKDVPL----------NLLRTGNS------- 221
+ D+A ++KD+ L N L +G S
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEK 236
Query: 222 --------------GGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVIS 267
+V W S++SG V N + E F+ M+ + T+ T++
Sbjct: 237 VSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLP 296
Query: 268 ACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFL 327
AC ++ G+++H Y G +V S+L+ MY K G + +A ++FR+ +
Sbjct: 297 ACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVT 356
Query: 328 WTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK 387
+ SMI A HG +A LF+ M G + +TF ++ ACSH GL + G F +M+
Sbjct: 357 FNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQ 416
Query: 388 DVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMG 447
+ Y I P +EH MVDL GRAG L+E I + VW + L++CR H N+E+
Sbjct: 417 NKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
Query: 448 KWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
+ ++ L ++ P + +LL+++ + W+
Sbjct: 477 RIAAKHLAELEPENSGNGLLLTSLYANAGSWE 508
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 172/380 (45%), Gaps = 53/380 (13%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
FREM G + + + S+ K + + GK +H +L+ ++D +V+S++D+
Sbjct: 102 LDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDM 161
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP----------- 111
Y K A ++F GE D+V +N MI Y +++L++ +++
Sbjct: 162 YSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITW 221
Query: 112 ----------------------------SKDVVSWNTIIDGLIRCGYERRALELLFCMVE 143
DVVSW +II GL+ +A + M+
Sbjct: 222 NALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLT 281
Query: 144 NGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDK 203
+G + T ++ GK++HG + L F+ S+L++MY KCG +
Sbjct: 282 HGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISE 341
Query: 204 ASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVT 263
A ++ + P V +NSM+ Y +G + ++ F M +D T T
Sbjct: 342 AMILFRKTP--------KKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFT 393
Query: 264 TVISACANAGLLEFGRQMHAYIQ---KIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQI 320
+++AC++AGL + G+ + +Q +I R++ Y + ++ + ++G L +A+ + + +
Sbjct: 394 AILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHY--ACMVDLLGRAGKLVEAYEMIKAM 451
Query: 321 N-EPNVFLWTSMISGCALHG 339
EP++F+W ++++ C HG
Sbjct: 452 RMEPDLFVWGALLAACRNHG 471
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 121/238 (50%), Gaps = 15/238 (6%)
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
G+ LH ++T + I + LV Y +CG+ A + ++P + SG +V
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMP----KRDISGCVV--- 87
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
M+ NG Y++ L FR M + +D V +++ A N EFG+ +H + K
Sbjct: 88 -MIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKF 146
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
+ DA++ SSLI MYSK G + +A +F + E ++ ++ +MISG A + + +A +L
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLV 206
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCIN---PGVEHCTSMV 403
+ M GI P+ +T+ +I+ SH+ E+ S +M C++ P V TS++
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELM----CLDGYKPDVVSWTSII 260
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 227/512 (44%), Gaps = 73/512 (14%)
Query: 3 FSLFREMQAKG-ACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F LF + KG P+ T+ S+ C+ +L GK +H+++LR+
Sbjct: 314 FQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSY------------ 361
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
L E T G N +I Y GD + F + +KD++SWN I
Sbjct: 362 -------------LLEDTSVG-----NALISFYARFGDTSAAYWAFSLMSTKDIISWNAI 403
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
+D + + L LL ++ VT + K++HG + L
Sbjct: 404 LDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGL 463
Query: 182 NGDN---FINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG 238
D + ++L++ Y KCG + A I + L+ RT +V +NS++SGYV +G
Sbjct: 464 LHDEEEPKLGNALLDAYAKCGNVEYAHKIF--LGLSERRT-----LVSYNSLLSGYVNSG 516
Query: 239 KYEDCLKTFRSM---------------------------VHELAIVDIR----TVTTVIS 267
++D F M E+ +R T+ ++
Sbjct: 517 SHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLP 576
Query: 268 ACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFL 327
CA L RQ H YI + G D + +L+ +Y+K GSL A+ +F+ ++ +
Sbjct: 577 VCAQLASLHLVRQCHGYIIR-GGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVM 635
Query: 328 WTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK 387
+T+M++G A+HG+GK+A ++ M I P+ V ++ AC H GL+++G + ++
Sbjct: 636 FTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIR 695
Query: 388 DVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMG 447
V+ + P +E VDL R G L + +F+ + + ++W + L +C + +++G
Sbjct: 696 TVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLG 755
Query: 448 KWVSEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
V+ LLQ D ++L+SNM ++ +W+
Sbjct: 756 HSVANHLLQAESDDTGNHVLISNMYAADAKWE 787
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 180/418 (43%), Gaps = 58/418 (13%)
Query: 24 VFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGD 83
V K C++ +L G+ +H + + G A + S+L++Y KC+ +
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMD------------- 73
Query: 84 VVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGL-IRCGYERRALELLFCM- 141
D +K MFR + S D V WN ++ GL + CG R + M
Sbjct: 74 ---------------DCQK---MFRQMDSLDPVVWNIVLTGLSVSCG--RETMRFFKAMH 113
Query: 142 VENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRT 201
+ + S VTF GK +H +I L D + ++LV MY K G
Sbjct: 114 FADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFG-- 171
Query: 202 DKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRT 261
I D + +V WN++++G+ N D ++F M+ E + T
Sbjct: 172 ----FIFPDAYTAFDGIADKD-VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYAT 226
Query: 262 VTTVISACANAG---LLEFGRQMHAYI-QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF 317
+ V+ CA+ GRQ+H+Y+ Q+ + +V +SL+ Y + G +++A +F
Sbjct: 227 IANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLF 286
Query: 318 RQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV-PNEVTFLGVINACSHVGLL 376
++ ++ W +I+G A + + +A LF ++++G V P+ VT + ++ C+ + L
Sbjct: 287 TRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDL 346
Query: 377 EEGS-TYFRMMKDVYCINPGVEHCTSMVDLYGRAG---------CLIETKNFIFENGI 424
G + +++ Y + +++ Y R G L+ TK+ I N I
Sbjct: 347 ASGKEIHSYILRHSYLLE-DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAI 403
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 171/416 (41%), Gaps = 80/416 (19%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFK-CCSAEKNL--QLGKGVHAWML-RNGVDADVVLVNS 58
F F M + PN T+++V C S +KN+ + G+ +H++++ R+ + V + NS
Sbjct: 209 FRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNS 268
Query: 59 ILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSW 118
++ YL+ G +E++ +F + SKD+VSW
Sbjct: 269 LVSFYLR-------------------------------VGRIEEAASLFTRMGSKDLVSW 297
Query: 119 NTIIDGLIRCGYERRALELLFCMVENG-TEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
N +I G +A +L +V G VT + GK++H ++
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 178 TLA-LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
+ L D + ++L+ Y + G T A +L+ T + I+ WN+++ +
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAY-----WAFSLMSTKD---IISWNAILDAFAD 409
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG------- 289
+ K L +++E +D T+ +++ C N + +++H Y K G
Sbjct: 410 SPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEE 469
Query: 290 -----HRIDAYVG-----------------------SSLIHMYSKSGSLDDAWVIFRQIN 321
+DAY +SL+ Y SGS DDA ++F +++
Sbjct: 470 PKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMS 529
Query: 322 EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLE 377
++ W+ M+ A +A +F + +G+ PN VT + ++ C+ + L
Sbjct: 530 TTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLH 585
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 121/287 (42%), Gaps = 19/287 (6%)
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
G+ LHG V L + ++ S++ MY KC R D + R +S V WN
Sbjct: 40 GRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQ--------KMFRQMDSLDPVVWN 91
Query: 229 SMVSGYVWNGKYEDCLKTFRSM--VHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ 286
+++G + E ++ F++M E + T V+ C G G+ MH+YI
Sbjct: 92 IVLTGLSVSCGRE-TMRFFKAMHFADEPKPSSV-TFAIVLPLCVRLGDSYNGKSMHSYII 149
Query: 287 KIGHRIDAYVGSSLIHMYSKSGSL-DDAWVIFRQINEPNVFLWTSMISGCALHGKGKQAS 345
K G D VG++L+ MY+K G + DA+ F I + +V W ++I+G + + A
Sbjct: 150 KAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAF 209
Query: 346 SLFEGMLNQGIVPNEVTFLGVINACSHVG---LLEEGSTYFRMMKDVYCINPGVEHCTSM 402
F ML + PN T V+ C+ + G + + V C S+
Sbjct: 210 RSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSL 269
Query: 403 VDLYGRAGCLIETKNFIFENGISHLTS---VWKSFLSSCRLHKNIEM 446
V Y R G + E + G L S V + S+C K ++
Sbjct: 270 VSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQL 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 13/219 (5%)
Query: 258 DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF 317
D R V+ ACA+ L GR +H + K+GH + V S+++MY+K +DD +F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 318 RQINEPNVFLWTSMISGCALHGKGKQASSLFEGM-LNQGIVPNEVTFLGVINACSHVGLL 376
RQ++ + +W +++G ++ G++ F+ M P+ VTF V+ C +G
Sbjct: 80 RQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 377 EEGSTYFRMMKDVYCINPGVEHCT----SMVDLYGRAGCLIETKNFIFENGISHLTSVWK 432
G + Y I G+E T ++V +Y + G + F+ W
Sbjct: 139 YNGKSMHS-----YIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWN 193
Query: 433 SFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNM 471
+ ++ N+ + S L+ P++P Y ++N+
Sbjct: 194 AIIAGFS-ENNMMADAFRSFCLMLKEPTEPN-YATIANV 230
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 182/363 (50%), Gaps = 41/363 (11%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
PN++T+ S+ K CS EK L+ G+ VH+ +++ + DV + S++D+Y KC ++
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIR-CGYERRA 134
F+ + VTW +I A+ G E+++ +FR + + +++ N + ++R CG
Sbjct: 342 FDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG----- 396
Query: 135 LELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEM 194
+ LGK+LH ++I ++ + +I S+LV +
Sbjct: 397 ---------------------------SVGALLLGKELHAQIIKNSIEKNVYIGSTLVWL 429
Query: 195 YCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHEL 254
YCKCG + A +L+ +P S +V W +M+SG G + L + M+ E
Sbjct: 430 YCKCGESRDAFNVLQQLP--------SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEG 481
Query: 255 AIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAW 314
+ T ++ + ACAN+ L GR +H+ +K + +VGS+LIHMY+K G + +A+
Sbjct: 482 VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAF 541
Query: 315 VIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVG 374
+F + E N+ W +MI G A +G ++A L M +G ++ F +++ C +
Sbjct: 542 RVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIE 601
Query: 375 LLE 377
L E
Sbjct: 602 LDE 604
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 191/417 (45%), Gaps = 48/417 (11%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKC----CSAEKNLQLGKGVHAWMLRNGVDADVVLVNS 58
F+LF + G ++T +F C CS +LG+ VH M++ GV ++++ +S
Sbjct: 168 FALFEDYVKHGI---RFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESS 223
Query: 59 ILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSW 118
++ Y +C G++ +L F + KDV+SW
Sbjct: 224 LVYFYAQC-------------------------------GELTSALRAFDMMEEKDVISW 252
Query: 119 NTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVIT 178
+I R G+ +A+ + M+ + +E T + G+Q+H V+
Sbjct: 253 TAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVK 312
Query: 179 LALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG 238
+ D F+ +SL++MY KCG + + ++ V W S+++ + G
Sbjct: 313 RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGM--------SNRNTVTWTSIIAAHAREG 364
Query: 239 KYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
E+ + FR M I + TV +++ AC + G L G+++HA I K + Y+GS
Sbjct: 365 FGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGS 424
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
+L+ +Y K G DA+ + +Q+ +V WT+MISGC+ G +A + M+ +G+ P
Sbjct: 425 TLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEP 484
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET 415
N T+ + AC++ L G + + K + ++ V ++++ +Y + G + E
Sbjct: 485 NPFTYSSALKACANSESLLIGRSIHSIAKKNHALS-NVFVGSALIHMYAKCGFVSEA 540
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 184/381 (48%), Gaps = 15/381 (3%)
Query: 88 NIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTE 147
N +I + + GD+ + +F ++P K+ V+W +IDG ++ G E A L V++G
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 148 FS-EVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASV 206
F+ E F ELG+Q+HG ++ + + G+ + SSLV Y +CG A
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSA-- 237
Query: 207 ILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVI 266
L ++ W +++S G + F M++ + + TV +++
Sbjct: 238 ------LRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSIL 291
Query: 267 SACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVF 326
AC+ L FGRQ+H+ + K + D +VG+SL+ MY+K G + D +F ++ N
Sbjct: 292 KACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTV 351
Query: 327 LWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGST-YFRM 385
WTS+I+ A G G++A SLF M + ++ N +T + ++ AC VG L G + ++
Sbjct: 352 TWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQI 411
Query: 386 MKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSC-RLHKNI 444
+K+ I V +++V LY + G + N + + S W + +S C L
Sbjct: 412 IKN--SIEKNVYIGSTLVWLYCKCGESRDAFN-VLQQLPSRDVVSWTAMISGCSSLGHES 468
Query: 445 EMGKWVSEMLLQVAPSDPEAY 465
E ++ EM+ + +P Y
Sbjct: 469 EALDFLKEMIQEGVEPNPFTY 489
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 59/109 (54%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+EM +G PN +T SS K C+ ++L +G+ +H+ +N ++V + ++++ +Y
Sbjct: 473 FLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYA 532
Query: 65 KCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK 113
KC A R+F+ E ++V+W MI Y G ++L + + ++
Sbjct: 533 KCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAE 581
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 279 RQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALH 338
+++HA K Y G++LI + G L A +F + E N WT+MI G +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 339 GKGKQASSLFEGMLNQGI-VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVE 397
G +A +LFE + GI NE F+ ++N CS E G M V N VE
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVE 221
Query: 398 HCTSMVDLYGRAGCL 412
+S+V Y + G L
Sbjct: 222 --SSLVYFYAQCGEL 234
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 201/409 (49%), Gaps = 28/409 (6%)
Query: 90 MIRAYLGAGDVEKSL----DMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENG 145
++ A+L ++ K +F ++ + ++T+I R L MV+
Sbjct: 49 LLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEE 108
Query: 146 TE---FSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG----DNFINSSLVEMYCKC 198
E S +TF +GKQ+H V+ NG D + + ++ +Y +
Sbjct: 109 EEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVK---NGVFLSDGHVQTGVLRIYVED 165
Query: 199 GRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVD 258
A + ++P +V W+ +++GYV G + L+ F+ M+ D
Sbjct: 166 KLLFDARKVFDEIP--------QPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPD 217
Query: 259 IRTVTTVISACANAGLLEFGRQMHAYIQKIGH-RIDAYVGSSLIHMYSKSGSLDDAWVIF 317
+VTT ++ACA G L G+ +H +++K D +VG++L+ MY+K G ++ A +F
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 318 RQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQ-GIVPNEVTFLGVINACSHVGLL 376
++ NVF W ++I G A +G K+A++ + + + GI P+ V LGV+ AC+H G L
Sbjct: 278 EKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFL 337
Query: 377 EEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLS 436
EEG T M+ Y I P EH + +VDL RAG L + + I + + L SVW + L+
Sbjct: 338 EEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLN 397
Query: 437 SCRLHKNIEMGKWVSEMLLQVAPSDPE----AYILLSNMCTSNHRWDEA 481
CR HKN+E+G+ + LL + + E A + LSN+ S R EA
Sbjct: 398 GCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEA 446
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 144/343 (41%), Gaps = 48/343 (13%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVD-ADVVLVNSILD 61
F L + + + P+ T + C +GK +H W+++NGV +D + +L
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLR 160
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y++ K A ++F+ +P DVV W+ +
Sbjct: 161 IYVEDKLLFDARKVFD-------------------------------EIPQPDVVKWDVL 189
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA- 180
++G +RCG LE+ M+ G E E + + GK +H V
Sbjct: 190 MNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRW 249
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
+ D F+ ++LV+MY KCG + A + + + + W +++ GY G
Sbjct: 250 IESDVFVGTALVDMYAKCGCIETAVEVFEKL--------TRRNVFSWAALIGGYAAYGYA 301
Query: 241 EDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRIDAYV 296
+ + E I D + V++ACA+ G LE GR M ++ I + + Y
Sbjct: 302 KKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHY- 360
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
S ++ + ++G LDDA + ++ +P +W ++++GC H
Sbjct: 361 -SCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH 402
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 160/340 (47%), Gaps = 27/340 (7%)
Query: 168 LGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNS------ 221
L K LH + + L D F ++L+ +Y D A + + P + T N
Sbjct: 135 LVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLV 194
Query: 222 -----------------GGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTT 264
+V WNS++SGY + +K F MV D + +
Sbjct: 195 KAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVS 254
Query: 265 VISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPN 324
+SACA +G + G+ +H Y ++ ID+++ + L+ Y+K G +D A IF ++
Sbjct: 255 TLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKT 314
Query: 325 VFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFR 384
+F W +MI+G A+HG G+ F M++ GI P+ VTF+ V+ CSH GL++E F
Sbjct: 315 LFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFD 374
Query: 385 MMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE----NGISHLTSVWKSFLSSCRL 440
M+ +Y +N ++H M DL GRAG + E I + G W L CR+
Sbjct: 375 QMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRI 434
Query: 441 HKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
H NIE+ + + + ++P D Y ++ M + RW+E
Sbjct: 435 HGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEE 474
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 170/345 (49%), Gaps = 20/345 (5%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKN--LQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F EM+ + P+ +T VFK C+A+KN L L K +H LR G+ +D+ +N+++ +
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y + A +LF+ + DVVT+N++I + A ++ ++ ++F ++P +D+VSWN++I
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G + + R A++L MV G + V + GK +H L
Sbjct: 222 SGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLF 281
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
D+F+ + LV+ Y KCG D A + + + + WN+M++G +G E
Sbjct: 282 IDSFLATGLVDFYAKCGFIDTA--------MEIFELCSDKTLFTWNAMITGLAMHGNGEL 333
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK---IGHRIDAYVGSS 299
+ FR MV D T +V+ C+++GL++ R + ++ + + Y
Sbjct: 334 TVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHY--GC 391
Query: 300 LIHMYSKSGSLDDAWVIFRQI-----NEPNVFLWTSMISGCALHG 339
+ + ++G +++A + Q+ N + W+ ++ GC +HG
Sbjct: 392 MADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHG 436
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 186/398 (46%), Gaps = 27/398 (6%)
Query: 112 SKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXX--XXXXXXVELG 169
S+ VSW + I+ L R G A + M G E + +TF LG
Sbjct: 33 SETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALG 92
Query: 170 KQLHGRVITLALNGDN-FINSSLVEMYCKCGR-----------TDKASVILKDVPLNLLR 217
LHG L L+ ++ + ++++ MY K GR DK SV + +R
Sbjct: 93 DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMR 152
Query: 218 TGN------------SGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTV 265
+G ++ W +M++G+V G E+ L FR M D +
Sbjct: 153 SGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAA 212
Query: 266 ISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNV 325
++AC N G L FG +H Y+ + + V +SLI +Y + G ++ A +F + + V
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 326 FLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRM 385
W S+I G A +G ++ F M +G P+ VTF G + ACSHVGL+EEG YF++
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 386 MKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH-KNI 444
MK Y I+P +EH +VDLY RAG L + + + V S L++C H NI
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNI 392
Query: 445 EMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEAA 482
+ + + + L + Y++LSNM ++ +W+ A+
Sbjct: 393 VLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGAS 430
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 187/389 (48%), Gaps = 17/389 (4%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCS--AEKNLQLGKGVHAWMLRNGVDADVVLV-NSILDL 62
F +M G PN T ++ C + LG +H + + G+D + V+V +I+ +
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 118
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y K F+ A +F+ + + VTWN MI Y+ +G V+ + MF +P +D++SW +I
Sbjct: 119 YSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMI 178
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
+G ++ GY+ AL M +G + V + G +H V++
Sbjct: 179 NGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFK 238
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ +++SL+++YC+CG + A + ++ RT +V WNS++ G+ NG +
Sbjct: 239 NNVRVSNSLIDLYCRCGCVEFARQVFYNME---KRT-----VVSWNSVIVGFAANGNAHE 290
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ---KIGHRIDAYVGSS 299
L FR M + D T T ++AC++ GL+E G + ++ +I RI+ Y
Sbjct: 291 SLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHY--GC 348
Query: 300 LIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
L+ +YS++G L+DA + + + +PN + S+++ C+ HG + L V
Sbjct: 349 LVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVK 408
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMK 387
+ ++ + N + G E S R MK
Sbjct: 409 SHSNYVILSNMYAADGKWEGASKMRRKMK 437
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 194/400 (48%), Gaps = 10/400 (2%)
Query: 83 DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMV 142
++V WN ++ Y G + +L +F + +DVVSWN +I G + AL+ + M
Sbjct: 168 NLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMR 227
Query: 143 ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTD 202
E + E T + GKQ I + ++ + + ++M+ KC R D
Sbjct: 228 EMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLD 287
Query: 203 KASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTV 262
+ + L R V NSM+ Y W+ ED L+ F + + D T
Sbjct: 288 DS--------VKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTF 339
Query: 263 TTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE 322
++V+S+ NA +L+ G +H+ + K+G +D V +SL+ MY K+GS+D A +F + +
Sbjct: 340 SSVLSS-MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDG 398
Query: 323 PNVFLWTSMISGCALHGKGKQASSLFEGML-NQGIVPNEVTFLGVINACSHVGLLEEGST 381
++ W ++I G A + + ++ ++F +L NQ + P+ VT +G++ AC + G + EG
Sbjct: 399 KDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQ 458
Query: 382 YFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLH 441
F M+ + +NPG EH +++L R G + E K+ + + +W+ L +
Sbjct: 459 IFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDL 518
Query: 442 KNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
+ + + V++ +L+ P Y++L + RW+ +
Sbjct: 519 GDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENS 558
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 195/419 (46%), Gaps = 23/419 (5%)
Query: 16 PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERL 75
P+ S + K+ L K VHA +L G N L LY K + A +L
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
F+ + + +TWN+ ++ G + +LD+F +P +DVVSWNT+I GL+ CG+ +
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 136 ELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFIN-SSLVEM 194
+ F M +E TF V G+Q+HG I ++ N + +S+++M
Sbjct: 122 RVFFDMQRWEIRPTEFTF---SILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDM 178
Query: 195 YCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHEL 254
Y + G D A L++ T +V WN ++ +G E L F M
Sbjct: 179 YRRLGVFDYA--------LSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREME 230
Query: 255 AIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAW 314
D TV+ V+S C++ L G+Q A K+G ++ V + I M+SK LDD+
Sbjct: 231 IQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSV 290
Query: 315 VIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVG 374
+FR++ + + L SMI + H G+ A LF + Q + P++ TF V+++ + V
Sbjct: 291 KLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM 350
Query: 375 LLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCL---------IETKNFIFENGI 424
L + ++K + ++ V TS++++Y + G + + K+ IF N +
Sbjct: 351 LDHGADVHSLVIKLGFDLDTAV--ATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTV 407
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 216/490 (44%), Gaps = 58/490 (11%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F LF M + PN++TLSSV C E GK VH L+ G+ + + N+++ +
Sbjct: 147 FCLFSSMLSH-CFPNEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSIYVANAVISM 201
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y +C G W + F + K++V+WN++I
Sbjct: 202 YGRCH-----------DGAAAYEAWTV-----------------FEAIKFKNLVTWNSMI 233
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXV---ELGK---QLHGRV 176
C ++A+ + M +G F T + E+ K QLH
Sbjct: 234 AAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLT 293
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVP---LNLLRTGNSGGIVPWNSMVSG 233
+ L + ++L+++Y S +L+D + + IV WN +++
Sbjct: 294 VKSGLVTQTEVATALIKVY---------SEMLEDYTDCYKLFMEMSHCRDIVAWNGIITA 344
Query: 234 Y-VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
+ V++ E + F + E D T ++V+ ACA +HA + K G
Sbjct: 345 FAVYDP--ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLA 402
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGML 352
D + +SLIH Y+K GSLD +F ++ +V W SM+ +LHG+ +F+ M
Sbjct: 403 DTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM- 461
Query: 353 NQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCL 412
I P+ TF+ +++ACSH G +EEG FR M + P + H ++D+ RA
Sbjct: 462 --DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERF 519
Query: 413 IETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQ-VAPSDPEAYILLSNM 471
E + I + + VW + L SCR H N +GK ++ L + V P++ +YI +SN+
Sbjct: 520 AEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNI 579
Query: 472 CTSNHRWDEA 481
+ ++EA
Sbjct: 580 YNAEGSFNEA 589
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/477 (21%), Positives = 205/477 (42%), Gaps = 62/477 (12%)
Query: 17 NQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGV--DADVVLVNSILDLYLKCKAFEYAER 74
+Q +++F+ C+ ++NL G +H ML + +V+L N ++++Y KC YA +
Sbjct: 58 SQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQ 117
Query: 75 LFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRA 134
+F +P ++VVSW +I G ++ G E+
Sbjct: 118 -------------------------------VFDTMPERNVVSWTALITGYVQAGNEQEG 146
Query: 135 LELLFCMVEN--GTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLV 192
L M+ + EF+ E GKQ+HG + L L+ ++ ++++
Sbjct: 147 FCLFSSMLSHCFPNEFT-------LSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVI 199
Query: 193 EMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVH 252
MY +C D A+ ++ N +V WNSM++ + + + F M
Sbjct: 200 SMYGRCH--DGAAAYEAWTVFEAIKFKN---LVTWNSMIAAFQCCNLGKKAIGVFMRMHS 254
Query: 253 ELAIVDIRTVTTVISACANAGLL---EFGR---QMHAYIQKIGHRIDAYVGSSLIHMYSK 306
+ D T+ + S+ + L E + Q+H+ K G V ++LI +YS+
Sbjct: 255 DGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE 314
Query: 307 S-GSLDDAWVIFRQINE-PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFL 364
D + +F +++ ++ W +I+ A++ ++A LF + + + P+ TF
Sbjct: 315 MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFS 373
Query: 365 GVINACSHVGLLEEG-STYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
V+ AC+ + S + +++K + + + + S++ Y + G L + +F++
Sbjct: 374 SVLKACAGLVTARHALSIHAQVIKGGFLADTVLNN--SLIHAYAKCGSL-DLCMRVFDDM 430
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
S W S L + LH ++ V + + + P D +I L + C+ R +E
Sbjct: 431 DSRDVVSWNSMLKAYSLHGQVDSILPVFQK-MDINP-DSATFIALLSACSHAGRVEE 485
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 167/297 (56%), Gaps = 12/297 (4%)
Query: 189 SSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFR 248
++++ Y + G A + +D+P + WN++++ NG + + + FR
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMP--------ERDVPSWNAILAACTQNGLFLEAVSLFR 248
Query: 249 SMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKS 307
M++E +I + TV V+SACA G L+ + +HA+ + D +V +SL+ +Y K
Sbjct: 249 RMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKC 308
Query: 308 GSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLN---QGIVPNEVTFL 364
G+L++A +F+ ++ ++ W SMI+ ALHG+ ++A ++FE M+ I P+ +TF+
Sbjct: 309 GNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFI 368
Query: 365 GVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGI 424
G++NAC+H GL+ +G YF +M + + I P +EH ++DL GRAG E + +
Sbjct: 369 GLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKM 428
Query: 425 SHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
++W S L++C++H ++++ + + L+ + P++ +++N+ W+EA
Sbjct: 429 KADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEA 485
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 185/405 (45%), Gaps = 25/405 (6%)
Query: 2 VFSLFREMQAKGAC-PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
FS FR M + PN + V K + VH + ++G VV+ ++L
Sbjct: 109 AFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALL 168
Query: 61 DLYLKCKA-FEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWN 119
Y + A +LF+ E +VV+W M+ Y +GD+ ++ +F ++P +DV SWN
Sbjct: 169 HSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWN 228
Query: 120 TIIDGLIRCGYERRALELLFCMV-ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVIT 178
I+ + G A+ L M+ E +EVT ++L K +H
Sbjct: 229 AILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYR 288
Query: 179 LALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG 238
L+ D F+++SLV++Y KCG ++AS + K + + WNSM++ + +G
Sbjct: 289 RDLSSDVFVSNSLVDLYGKCGNLEEASSVFK--------MASKKSLTAWNSMINCFALHG 340
Query: 239 KYEDCLKTFRSMVHELAIVDIR----TVTTVISACANAGLLEFGRQMHAYIQK---IGHR 291
+ E+ + F M+ +L I DI+ T +++AC + GL+ GR + I R
Sbjct: 341 RSEEAIAVFEEMM-KLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPR 399
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEG 350
I+ Y LI + ++G D+A + + + + +W S+++ C +HG A +
Sbjct: 400 IEHY--GCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKN 457
Query: 351 MLNQGIVPNEVTFLGVI-NACSHVGLLEEGSTYFRMMKDVYCINP 394
++ + PN ++ ++ N +G EE +M+K P
Sbjct: 458 LV--ALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKP 500
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 235/517 (45%), Gaps = 60/517 (11%)
Query: 8 EMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCK 67
E+ G P+ L + + + L + +H ++ ++G ++ L NS++ Y
Sbjct: 45 ELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSD 104
Query: 68 AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSL---------DMFRN--------- 109
+ E A ++F+ + DV++WN ++ Y+ +G ++ + D+F N
Sbjct: 105 SLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALA 164
Query: 110 ----------------------LPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTE 147
L +VV N +ID +CG+ A+ + M E T
Sbjct: 165 ACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDT- 223
Query: 148 FSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVI 207
V++ +ELG ++ N D + L++ + K G + A +
Sbjct: 224 ---VSWNAIVASCSRNGKLELGLWFFHQMP----NPDTVTYNELIDAFVKSGDFNNAFQV 276
Query: 208 LKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVIS 267
L D+P NS WN++++GYV + K + + F M D +++ V++
Sbjct: 277 LSDMP-----NPNSSS---WNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLA 328
Query: 268 ACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFL 327
A A ++ +G +HA K+G V S+LI MYSK G L A ++F + N+ +
Sbjct: 329 AVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIV 388
Query: 328 WTSMISGCALHGKGKQASSLFEGMLNQGIV-PNEVTFLGVINACSHVGL-LEEGSTYFRM 385
W MISG A +G +A LF + + + P+ TFL ++ CSH + +E YF M
Sbjct: 389 WNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEM 448
Query: 386 MKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIE 445
M + Y I P VEHC S++ G+ G + + K I E G + W++ L +C K+++
Sbjct: 449 MINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLK 508
Query: 446 MGKWVSEMLLQVAPSDPEA--YILLSNMCTSNHRWDE 480
K V+ ++++ +D + YI++SN+ + RW E
Sbjct: 509 AAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWRE 545
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 127/300 (42%), Gaps = 41/300 (13%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVD-ADVVLVNSILDLY 63
LF E+ PN+++ ++ C+ LG +H+ +++ G++ +VV+ N ++D+Y
Sbjct: 143 LFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMY 202
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNI-------------------------------MIR 92
KC + A +F+ E D V+WN +I
Sbjct: 203 GKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELID 262
Query: 93 AYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVT 152
A++ +GD + + ++P+ + SWNTI+ G + A E M +G F E +
Sbjct: 263 AFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYS 322
Query: 153 FXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVP 212
V G +H L L+ + S+L++MY KCG A ++ +P
Sbjct: 323 LSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP 382
Query: 213 LNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIR-TVTTVISACAN 271
++ WN M+SGY NG + +K F + E + R T +++ C++
Sbjct: 383 RK--------NLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSH 434
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 122/257 (47%), Gaps = 20/257 (7%)
Query: 117 SWNTIIDGLIR---CGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
SW+TI+ L R G R A+EL + +G + V L +QLH
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVEL----INDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSG 233
G V + +++SL+ Y + A + ++P ++ WNS+VSG
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMP--------DPDVISWNSLVSG 130
Query: 234 YVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG-HRI 292
YV +G++++ + F + + + T ++ACA L G +H+ + K+G +
Sbjct: 131 YVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKG 190
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGML 352
+ VG+ LI MY K G +DDA ++F+ + E + W ++++ C+ +GK + F M
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP 250
Query: 353 NQGIVPNEVTFLGVINA 369
N P+ VT+ +I+A
Sbjct: 251 N----PDTVTYNELIDA 263
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 108/231 (46%), Gaps = 2/231 (0%)
Query: 219 GNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFG 278
G++ W+++V G L+ ++++ D + ++ N G +
Sbjct: 16 GSTASSNSWSTIVPALARFGSI-GVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLC 74
Query: 279 RQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALH 338
RQ+H Y+ K G + + +SL+ Y S SL+DA +F ++ +P+V W S++SG
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 339 GKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH 398
G+ ++ LF + + PNE +F + AC+ + L G+ + + V
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 399 CTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKW 449
++D+YG+ G ++ +F++ T W + ++SC + +E+G W
Sbjct: 195 GNCLIDMYGKCG-FMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLW 244
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 165/340 (48%), Gaps = 31/340 (9%)
Query: 98 GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALEL-LFCMVENGTEFSEVTFXXX 156
G+ + + +F L S +WN +I L R AL L + M+ + ++F + TF
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFV 125
Query: 157 XXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVP---- 212
+ LG Q+HG I D F ++L+++Y KCG+ D + +P
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSI 185
Query: 213 ----------------------LNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSM 250
N + N +V W +M++ YV N + ++ + FR M
Sbjct: 186 VSWTTMLYGLVSNSQLDSAEIVFNQMPMRN---VVSWTAMITAYVKNRRPDEAFQLFRRM 242
Query: 251 VHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSL 310
+ + T+ ++ A G L GR +H Y K G +D ++G++LI MYSK GSL
Sbjct: 243 QVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSL 302
Query: 311 DDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV-PNEVTFLGVINA 369
DA +F + ++ W SMI+ +HG G++A SLFE M + V P+ +TF+GV++A
Sbjct: 303 QDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSA 362
Query: 370 CSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRA 409
C++ G +++G YF M VY I+P EH M+ L +A
Sbjct: 363 CANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQA 402
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 14/274 (5%)
Query: 17 NQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLF 76
+++T V K C A +++LG VH ++ G DV N+++DLY KC + ++F
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 77 ELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALE 136
+ +V+W M+ + ++ + +F +P ++VVSW +I ++ A +
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ 237
Query: 137 LLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYC 196
L M + + +E T + +G+ +H D F+ ++L++MY
Sbjct: 238 LFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYS 297
Query: 197 KCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI 256
KCG A + + G S + WNSM++ +G E+ L F M E ++
Sbjct: 298 KCGSLQDARKVFD------VMQGKS--LATWNSMITSLGVHGCGEEALSLFEEMEEEASV 349
Query: 257 -VDIRTVTTVISACANA-----GLLEFGRQMHAY 284
D T V+SACAN GL F R + Y
Sbjct: 350 EPDAITFVGVLSACANTGNVKDGLRYFTRMIQVY 383
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 120/307 (39%), Gaps = 48/307 (15%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNS 229
KQ+H ++I L D + L+ + G T AS++ + S WN
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQL--------QSPSTFTWNL 88
Query: 230 MVSGYVWNGKYEDCLKTF-RSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
M+ N K + L F M+ + D T VI AC + + G Q+H K
Sbjct: 89 MIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKA 148
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHG--------- 339
G D + ++L+ +Y K G D +F ++ ++ WT+M+ G +
Sbjct: 149 GFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVF 208
Query: 340 ----------------------KGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLE 377
+ +A LF M + PNE T + ++ A + +G L
Sbjct: 209 NQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLS 268
Query: 378 EGSTYFRMMKDVYCINPGVEHC---TSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSF 434
G R + D N V C T+++D+Y + G L + + +F+ + W S
Sbjct: 269 MG----RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARK-VFDVMQGKSLATWNSM 323
Query: 435 LSSCRLH 441
++S +H
Sbjct: 324 ITSLGVH 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
F LFR MQ PN++T+ ++ + + +L +G+ VH + +NG D L +++D
Sbjct: 235 AFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALID 294
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMF 107
+Y KC + + A ++F++ + TWN MI + G E++L +F
Sbjct: 295 MYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLF 340
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 186/393 (47%), Gaps = 30/393 (7%)
Query: 118 WNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
+NT+I + G + +L L M+ + + + +TF V G LHG+ +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLN---------LLRTGNSG------ 222
D F+ +S V Y + G + + + D+ LN L G +G
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDI-LNPCVVACNSLLDACGRNGEMDYAF 172
Query: 223 ---------GIVPWNSMVSGYVWNGKYEDCLKTFRSMVH-ELAIV--DIRTVTTVISACA 270
+V W ++++G+ G + L F M+ E A++ + T +V+S+CA
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 271 N--AGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLW 328
N G + G+Q+H Y+ + +G++L+ MY K+G L+ A IF QI + V W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 329 TSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
++IS A +G+ KQA +FE M + + PN +T L ++ AC+ L++ G F +
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 389 VYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGK 448
Y I P EH +VDL GRAG L++ NFI SV + L +C++H+N E+G
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 449 WVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
V + L+ + P Y+ LS + W EA
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEA 445
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 156/345 (45%), Gaps = 19/345 (5%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+LF M A PN T S+ K + ++ G +H L+ G D + S +
Sbjct: 71 LALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRF 130
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y + E + ++F+ VV N ++ A G+++ + + F+ +P DVVSW T+I
Sbjct: 131 YGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVI 190
Query: 123 DGLIRCGYERRALELLFCMVENGTEF---SEVTFXXXXXXXXXXXX--VELGKQLHGRVI 177
+G + G +AL + M++N +E TF + LGKQ+HG V+
Sbjct: 191 NGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVM 250
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
+ + + ++L++MY K G + A I + + WN+++S N
Sbjct: 251 SKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI--------RDKKVCAWNAIISALASN 302
Query: 238 GKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI---QKIGHRIDA 294
G+ + L+ F M + T+ +++ACA + L++ G Q+ + I KI +
Sbjct: 303 GRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEH 362
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALH 338
Y ++ + ++G L DA + + EP+ + +++ C +H
Sbjct: 363 Y--GCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIH 405
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 199/457 (43%), Gaps = 66/457 (14%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V L+ + G P+ ++ V K + G A + + G D + N I+D
Sbjct: 90 VLRLYEQRSRCGIMPDAFSFPVVIKSAG-----RFGILFQALVEKLGFFKDPYVRNVIMD 144
Query: 62 LYLKCKAFEYAER-------------------------------LFELTGEGDVVTWNIM 90
+Y+K ++ E A + LF++ E DVV+W +M
Sbjct: 145 MYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVM 204
Query: 91 IRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSE 150
I + D+E + F +P K VVSWN ++ G + G+ AL L M+ G +E
Sbjct: 205 ITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNE 264
Query: 151 VTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKD 210
T+ L + L + + + F+ ++L++M+ KC A I +
Sbjct: 265 TTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNE 324
Query: 211 V------------------------PLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKT 246
+ L T +V WNS+++GY NG+ ++
Sbjct: 325 LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEF 384
Query: 247 FRSMV-HELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYS 305
F M+ + + D T+ +V+SAC + LE G + YI+K +++ SLI MY+
Sbjct: 385 FEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYA 444
Query: 306 KSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLG 365
+ G+L +A +F ++ E +V + ++ + A +G G + +L M ++GI P+ VT+
Sbjct: 445 RGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTS 504
Query: 366 VINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSM 402
V+ AC+ GLL+EG F+ ++ NP +H M
Sbjct: 505 VLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM 536
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 17/230 (7%)
Query: 228 NSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK 287
NSM + D L+ + + D + VI + G+L A ++K
Sbjct: 75 NSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGIL-----FQALVEK 129
Query: 288 IGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSL 347
+G D YV + ++ MY K S++ A +F QI++ W MISG G ++A L
Sbjct: 130 LGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKL 189
Query: 348 FEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYG 407
F+ M +V V G + V LE YF M + V +M+ Y
Sbjct: 190 FDMMPENDVVSWTVMITGF----AKVKDLENARKYFDRMPE-----KSVVSWNAMLSGYA 240
Query: 408 RAGCL---IETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEML 454
+ G + N + G+ + W +S+C + + + + +++
Sbjct: 241 QNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 192/423 (45%), Gaps = 31/423 (7%)
Query: 86 TWNI-MIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVEN 144
+W I ++++ GD ++ ++R++ + N + + ++AL F ++
Sbjct: 55 SWAIRLLKSSSRFGDSSYTVSIYRSI--GKLYCANPVFKAYLVSSSPKQALGFYFDILRF 112
Query: 145 GTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKA 204
G TF V+ GK HG+ I + + +SL+ MY CG D A
Sbjct: 113 GFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLA 172
Query: 205 SVILKDVP-----------LNLLRTGN------------SGGIVPWNSMVSGYVWNGKYE 241
+ ++P ++R G+ I+ WN M+S Y+
Sbjct: 173 KKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPG 232
Query: 242 DCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLI 301
+ FR MV + T+ +++AC + L+ GR +HA + + + ++LI
Sbjct: 233 VSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALI 292
Query: 302 HMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
MY K + A IF ++ N W MI LHG+ + LFE M+N + P+EV
Sbjct: 293 DMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEV 352
Query: 362 TFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET----KN 417
TF+GV+ C+ GL+ +G +Y+ +M D + I P H M +LY AG E KN
Sbjct: 353 TFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKN 412
Query: 418 FIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHR 477
E+ ++ ++ W + LSS R N +G+ +++ L++ P + + Y LL N+ + R
Sbjct: 413 LPDED-VTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGR 471
Query: 478 WDE 480
W++
Sbjct: 472 WED 474
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 157/346 (45%), Gaps = 15/346 (4%)
Query: 13 GACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYA 72
G P+ YT S+ C + GK H +++G D + + NS++ +Y C A + A
Sbjct: 113 GFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLA 172
Query: 73 ERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYER 132
++LF + D+V+WN +I + GDV + +F +P K+++SWN +I +
Sbjct: 173 KKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPG 232
Query: 133 RALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLV 192
++ L MV G + +E T ++ G+ +H +I LN I+++L+
Sbjct: 233 VSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALI 292
Query: 193 EMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVH 252
+MY KC A I + + V WN M+ + +G+ E L+ F +M++
Sbjct: 293 DMYGKCKEVGLARRIFDSLSIR--------NKVTWNVMILAHCLHGRPEGGLELFEAMIN 344
Query: 253 ELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS--LIHMYSKSGSL 310
+ D T V+ CA AGL+ G+ ++ + +I G + ++YS +G
Sbjct: 345 GMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVD-EFQIKPNFGHQWCMANLYSSAGFP 403
Query: 311 DDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGML 352
++A + + + P W +++S G S+ + ++
Sbjct: 404 EEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLI 449
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
SLFREM G N+ TL + C L+ G+ VHA ++R +++ VV+ +++D+Y
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 64 LKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS----KDVVSWN 119
KCK A R+F+ + VTWN+MI A+ G E L++F + + D V++
Sbjct: 296 GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 120 TIIDGLIRCG 129
++ G R G
Sbjct: 356 GVLCGCARAG 365
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 161/331 (48%), Gaps = 28/331 (8%)
Query: 179 LALNGDNFINSSLVEMYCKCGRTDKASVILKDVP------LNLLRTG--NSGG------- 223
L ++ ++LV MY G A + ++P N++ TG N G
Sbjct: 152 LGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCF 211
Query: 224 --------IVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIR-TVTTVISACANAGL 274
+V W +++ GY K ++ + F MV AI T+ ++ A N G
Sbjct: 212 LEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGD 271
Query: 275 LEFGRQMHAYIQKIGH-RIDAYVGSSLIHMYSKSGSLDDAWVIFRQI--NEPNVFLWTSM 331
L+ +HAY+ K G D V +SLI Y+K G + A+ F +I N+ WT+M
Sbjct: 272 LKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTM 331
Query: 332 ISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGS-TYFRMMKDVY 390
IS A+HG GK+A S+F+ M G+ PN VT + V+NACSH GL EE +F M + Y
Sbjct: 332 ISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEY 391
Query: 391 CINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWV 450
I P V+H +VD+ R G L E + E I VW+ L +C ++ + E+ + V
Sbjct: 392 KITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERV 451
Query: 451 SEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
+ L+++ S Y+L+SN+ R+ +A
Sbjct: 452 TRKLMELERSHGGDYVLMSNIFCGTGRFLDA 482
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 21/315 (6%)
Query: 48 GVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMF 107
G ++ V + +++ +YL A ++F+ E + VTWN+MI GD EK+L
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 108 RNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVE-NGTEFSEVTFXXXXXXXXXXXXV 166
+P++ VVSW TIIDG R + A+ L MV + + +E+T +
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 167 ELGKQLHGRVITLALNG-DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIV 225
++ +H V D + +SL++ Y KCG A ++P +V
Sbjct: 273 KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIP------NGRKNLV 326
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIR-TVTTVISACANAGLLE------FG 278
W +M+S + +G ++ + F+ M L + R T+ +V++AC++ GL E F
Sbjct: 327 SWTTMISAFAIHGMGKEAVSMFKDM-ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFN 385
Query: 279 RQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCAL 337
++ Y KI + Y L+ M + G L++A I +I E +W ++ C++
Sbjct: 386 TMVNEY--KITPDVKHY--GCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSV 441
Query: 338 HGKGKQASSLFEGML 352
+ + A + ++
Sbjct: 442 YDDAELAERVTRKLM 456
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 183/391 (46%), Gaps = 22/391 (5%)
Query: 98 GDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGT------EFSEV 151
GD+ ++ +FR +P WN II G + A M++ + +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 152 TFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDV 211
T QLH ++ L+ D+ + ++L++ Y K G A + ++
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 212 PLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACAN 271
P+ + WN++++G V + + ++ ++ M E TV + AC++
Sbjct: 171 PVR--------DVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSH 222
Query: 272 AGLLEFGRQM-HAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWT 329
G ++ G + H Y + V ++ I MYSK G +D A+ +F Q + +V W
Sbjct: 223 LGDVKEGENIFHGYSND-----NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWN 277
Query: 330 SMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDV 389
+MI+G A+HG+ +A +F+ + + GI P++V++L + AC H GL+E G + F M
Sbjct: 278 TMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-C 336
Query: 390 YCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKW 449
+ ++H +VDL RAG L E + I + +W+S L + ++ ++EM +
Sbjct: 337 KGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEI 396
Query: 450 VSEMLLQVAPSDPEAYILLSNMCTSNHRWDE 480
S + ++ ++ ++LLSN+ + RW +
Sbjct: 397 ASREIKEMGVNNDGDFVLLSNVYAAQGRWKD 427
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 24/289 (8%)
Query: 82 GDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCM 141
D + ++ AY GD+ + +F +P +DV SWN +I GL+ A+EL M
Sbjct: 142 ADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRM 201
Query: 142 VENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFI-NSSLVEMYCKCGR 200
G SEVT LG G I + DN I +++ ++MY KCG
Sbjct: 202 ETEGIRRSEVTVVAALGACS-----HLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGF 256
Query: 201 TDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIR 260
DKA + + TG +V WN+M++G+ +G+ L+ F + D
Sbjct: 257 VDKAYQVFEQF------TGKK-SVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDV 309
Query: 261 TVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQI 320
+ ++AC +AGL+E+G + + G + ++ + S++G L +A I +
Sbjct: 310 SYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSM 369
Query: 321 NE-PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
+ P+ LW S++ AS ++ + I E+ +GV N
Sbjct: 370 SMIPDPVLWQSLLG----------ASEIYSDVEMAEIASREIKEMGVNN 408
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 29/284 (10%)
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKC-----GRTDKASVILKDVPLNLLRTGNSGGI 224
KQL +T +F+ S L+E +C G A I + +P L
Sbjct: 20 KQLQSHFLTAGHFQSSFLRSRLLE---RCAISPFGDLSFAVQIFRYIPKPLTND------ 70
Query: 225 VPWNSMVSGYVWNGKYEDCLKTFRSMVH------ELAIVDIRTVTTVISACANAGLLEFG 278
WN+++ G+ + +RSM+ + VD T + + ACA A
Sbjct: 71 --WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAM 128
Query: 279 RQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALH 338
Q+H I + G D+ + ++L+ YSK+G L A+ +F ++ +V W ++I+G
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSG 188
Query: 339 GKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEH 398
+ +A L++ M +GI +EVT + + ACSH+G ++EG F N V
Sbjct: 189 NRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIV 243
Query: 399 CTSMVDLYGRAGCLIETKNFIFENGISHLTSV-WKSFLSSCRLH 441
+ +D+Y + G ++ +FE + V W + ++ +H
Sbjct: 244 SNAAIDMYSKCG-FVDKAYQVFEQFTGKKSVVTWNTMITGFAVH 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGV-HAWMLRNGVDADVVLVNSILDLY 63
L++ M+ +G ++ T+ + CS +++ G+ + H + N V++ N+ +D+Y
Sbjct: 197 LYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN-----VIVSNAAIDMY 251
Query: 64 LKCKAFEYAERLFE-LTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL 110
KC + A ++FE TG+ VVTWN MI + G+ ++L++F L
Sbjct: 252 SKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL 299
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 182/427 (42%), Gaps = 41/427 (9%)
Query: 5 LFREMQAKGAC-PNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNS-ILDL 62
LFR M ++ PN L+++ K L+LGK VHA +L++ + V+S ++DL
Sbjct: 302 LFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDL 361
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y KC GD+ +F ++ +SW ++
Sbjct: 362 YCKC-------------------------------GDMASGRRVFYGSKQRNAISWTALM 390
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
G G +AL + M + G VT ++ GK++H +
Sbjct: 391 SGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFL 450
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
+ + +SL+ MY KCG + + P+ L + W +M+ YV N
Sbjct: 451 PNVSLVTSLMVMYSKCG--------VPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRA 502
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
++ FR M+ D T+ V++ C++ L+ G+++H +I K +V + +I
Sbjct: 503 GIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIK 562
Query: 303 MYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
MY K G L A F + WT++I + + A + FE M+++G PN T
Sbjct: 563 MYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFT 622
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN 422
F V++ CS G ++E +F +M +Y + P EH + +++L R G + E + +
Sbjct: 623 FTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRLAVMS 682
Query: 423 GISHLTS 429
S L +
Sbjct: 683 SSSSLQT 689
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 187/423 (44%), Gaps = 45/423 (10%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V S F EM+ G N Y+LS+VFK + L+ G HA ++NG+ V L S++D
Sbjct: 198 VLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVD 257
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+Y KC A R+F+ E +D+V W +
Sbjct: 258 MYFKCGKVGLARRVFDEIVE-------------------------------RDIVVWGAM 286
Query: 122 IDGLIRCGYERRALELLFCMV-ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI-TL 179
I GL + AL L M+ E + V ++LGK++H V+ +
Sbjct: 287 IAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSK 346
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
F++S L+++YCKCG D AS + + W +++SGY NG+
Sbjct: 347 NYVEQPFVHSGLIDLYCKCG--DMAS------GRRVFYGSKQRNAISWTALMSGYAANGR 398
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
++ L++ M E D+ T+ TV+ CA ++ G+++H Y K + + +S
Sbjct: 399 FDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTS 458
Query: 300 LIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
L+ MYSK G + +F ++ + NV WT+MI + + +F ML P+
Sbjct: 459 LMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPD 518
Query: 360 EVTFLGVINACSHVGLLEEGST-YFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
VT V+ CS + L+ G + ++K + P V ++ +YG+ G L + NF
Sbjct: 519 SVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDL-RSANF 575
Query: 419 IFE 421
F+
Sbjct: 576 SFD 578
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 197/449 (43%), Gaps = 55/449 (12%)
Query: 9 MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKA 68
++ +G N T S++ + C K+L GK VH + NG++++ L ++ +Y C +
Sbjct: 102 LEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGS 161
Query: 69 FEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRC 128
+ A+++F+ + +V +WN ++R T+I G R
Sbjct: 162 VKDAQKVFDESTSSNVYSWNALLRG--------------------------TVISGKKRY 195
Query: 129 GYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFIN 188
+ L M E G + + + + G + H I L F+
Sbjct: 196 ---QDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLK 252
Query: 189 SSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFR 248
+SLV+MY KCG+ A + ++ IV W +M++G N + + L FR
Sbjct: 253 TSLVDMYFKCGKVGLARRVFDEIV--------ERDIVVWGAMIAGLAHNKRQWEALGLFR 304
Query: 249 SMVHELAIVDIRTV-TTVISACANAGLLEFGRQMHAYIQKIGHRID-AYVGSSLIHMYSK 306
+M+ E I + TT++ + L+ G+++HA++ K + ++ +V S LI +Y K
Sbjct: 305 TMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCK 364
Query: 307 SGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGV 366
G + +F + N WT+++SG A +G+ QA M +G P+ VT V
Sbjct: 365 CGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATV 424
Query: 367 INACSHVGLLEEGSTYFRMMKDVYCIN------PGVEHCTSMVDLYGRAGC---LIETKN 417
+ C+ + +++G K+++C P V TS++ +Y + G I +
Sbjct: 425 LPVCAELRAIKQG-------KEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFD 477
Query: 418 FIFENGISHLTSVWKSFLSSCRLHKNIEM 446
+ + + T++ ++ +C L IE+
Sbjct: 478 RLEQRNVKAWTAMIDCYVENCDLRAGIEV 506
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 150/329 (45%), Gaps = 22/329 (6%)
Query: 134 ALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVE 193
AL +L + + G + TF + GKQ+H + L + F+ + LV
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVH 154
Query: 194 MYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK--YEDCLKTFRSMV 251
MY CG A + + S + WN+++ G V +GK Y+D L TF M
Sbjct: 155 MYTACGSVKDAQKVFDE--------STSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM- 205
Query: 252 HELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSL 310
EL + +++ +++ V + A A L G + HA K G ++ +SL+ MY K G +
Sbjct: 206 RELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKV 265
Query: 311 DDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLN-QGIVPNEVTFLGVINA 369
A +F +I E ++ +W +MI+G A + + +A LF M++ + I PN V ++
Sbjct: 266 GLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPV 325
Query: 370 CSHVGLLEEGS-TYFRMMKDV-YCINPGVEHCTSMVDLYGRAGCLIETKNFIF----ENG 423
V L+ G + ++K Y P V + ++DLY + G + + + N
Sbjct: 326 LGDVKALKLGKEVHAHVLKSKNYVEQPFVH--SGLIDLYCKCGDMASGRRVFYGSKQRNA 383
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMGKWVSE 452
IS T++ + ++ R + + W+ +
Sbjct: 384 IS-WTALMSGYAANGRFDQALRSIVWMQQ 411
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 41/347 (11%)
Query: 168 LGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPW 227
LG +H + + F+ +L++MY KC A + ++P V W
Sbjct: 66 LGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQR--------NAVVW 117
Query: 228 NSMVSGYVWNGKYEDCLK---------------------------TFRSMVHELAIVDIR 260
N+M+S Y GK ++ ++ ++R++ +++ R
Sbjct: 118 NAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFR 177
Query: 261 ------TVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAW 314
T+ ++SAC+ G +++H+Y + + S L+ Y + GS+
Sbjct: 178 FKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQ 237
Query: 315 VIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVG 374
++F + + +V W+S+IS ALHG + A F+ M + P+++ FL V+ ACSH G
Sbjct: 238 LVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAG 297
Query: 375 LLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSF 434
L +E YF+ M+ Y + +H + +VD+ R G E I W +
Sbjct: 298 LADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGAL 357
Query: 435 LSSCRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
L +CR + IE+ + + LL V P +P Y+LL + S R +EA
Sbjct: 358 LGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEA 404
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 190/415 (45%), Gaps = 37/415 (8%)
Query: 2 VFSLFREMQAKGACP-NQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+LF +M + A P + + S K C+A LG VHA +++ ++ + ++L
Sbjct: 31 ALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALL 90
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRN---LPSKDVVS 117
D+Y KC + +A +LF+ + + V WN MI Y G V+++++++ +P++ S
Sbjct: 91 DMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES--S 148
Query: 118 WNTIIDGLIRCGYER---RALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
+N II GL+ G E RA+E M+E + + +T L K++H
Sbjct: 149 FNAIIKGLV--GTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHS 206
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
+ + S LVE Y +CG S++ + + + + +V W+S++S Y
Sbjct: 207 YAFRNLIEPHPQLKSGLVEAYGRCG-----SIVYVQLVFDSMEDRD---VVAWSSLISAY 258
Query: 235 VWNGKYEDCLKTFRSMVHELAIV--DIRTVTTVISACANAGLLE-----FGRQMHAYIQK 287
+G E LKTF+ M ELA V D V+ AC++AGL + F R Y
Sbjct: 259 ALHGDAESALKTFQEM--ELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDY--- 313
Query: 288 IGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE-PNVFLWTSMISGCALHGKGKQAS- 345
G R S L+ + S+ G ++A+ + + + E P W +++ C +G+ + A
Sbjct: 314 -GLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEI 372
Query: 346 SLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTY-FRMMKDVYCINPGVEHC 399
+ E ++ + P LG I VG EE +M + ++PG C
Sbjct: 373 AARELLMVEPENPANYVLLGKIYMS--VGRQEEAERLRLKMKESGVKVSPGSSWC 425
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 49/299 (16%)
Query: 224 IVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMH 282
++ +S Y G +E L F M A+ +D + + +CA A G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 283 AYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGK 342
A+ K + +VG +L+ MY K S+ A +F +I + N +W +MIS GK K
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 343 QASSLFEGM-----------LNQGIV----------------------PNEVTFLGVINA 369
+A L+E M + +G+V PN +T L +++A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 370 CSHVGLLEEGSTYFRMMKDVYC------INPGVEHCTSMVDLYGRAGCLIETKNFIFENG 423
CS +G FR++K+++ I P + + +V+ YGR G ++ + +F++
Sbjct: 192 CSAIGA-------FRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQ-LVFDSM 243
Query: 424 ISHLTSVWKSFLSSCRLHKNIEMG-KWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
W S +S+ LH + E K EM L D A++ + C+ DEA
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEA 302
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 176/382 (46%), Gaps = 24/382 (6%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
+L M A+G P+ +T +V ++ L + M + ++ADVV+ +I+D
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 64 LKCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAG---DVEKSL-DMFRNLPSKDV 115
K A LF E+ +G +VVT+N +IR G D + L DM + +V
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
V+++ +ID ++ G A +L M++ + T+ ++ K +
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM--- 382
Query: 176 VITLALNGDNFIN----SSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMV 231
L ++ D F N ++L++ +CK R ++ + +++ + G G V +N+++
Sbjct: 383 -FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS----QRGLVGNTVTYNTLI 437
Query: 232 SGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR 291
G G + K F+ MV + DI T + ++ G LE + Y+QK
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSL 347
D Y + +I K+G ++D W +F ++ +PNV ++T+MISG G ++A +L
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 348 FEGMLNQGIVPNEVTFLGVINA 369
F M G +PN T+ +I A
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRA 579
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 99/496 (19%), Positives = 191/496 (38%), Gaps = 92/496 (18%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V SL MQ + Y+ + + C L L V M++ G + D+V ++S+L
Sbjct: 98 LVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLL 157
Query: 61 DLYLKCK----AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK--- 113
+ Y K A +++F + + + VT+N +I +++ + + ++
Sbjct: 158 NGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ 217
Query: 114 -DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
D+ ++ T+++GL + G AL L L K
Sbjct: 218 PDLFTYGTVVNGLCKRGDIDLALSL------------------------------LKKME 247
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP----WN 228
G++ D I +++++ C + A LNL ++ GI P +N
Sbjct: 248 KGKI-----EADVVIYTTIIDALCNYKNVNDA--------LNLFTEMDNKGIRPNVVTYN 294
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
S++ G++ D + M+ ++ T + +I A G L ++ Y + I
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL--YDEMI 352
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLF 348
ID P++F ++S+I+G +H + +A +F
Sbjct: 353 KRSID-----------------------------PDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGR 408
E M+++ PN VT+ +I +EEG FR M + V + T + L+
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 409 AGCLIETKNF--IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAY- 465
C + K F + +G+ + L + +E V E LQ + +P+ Y
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE-YLQKSKMEPDIYT 502
Query: 466 --ILLSNMCTSNHRWD 479
I++ MC + D
Sbjct: 503 YNIMIEGMCKAGKVED 518
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 141/319 (44%), Gaps = 13/319 (4%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
L +M + PN T S++ E L + ++ M++ +D D+ +S+++ +
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 65 KCKAFEYAERLFELTGEGD----VVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DVV 116
+ A+ +FEL D VVT+N +I+ + A VE+ +++FR + + + V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
++NT+I GL + G A ++ MV +G +T+ +E + +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
+ D + + ++E CK G+ + D+ +L G ++ + +M+SG+
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGW----DLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
G E+ FR M + + + T T+I A G ++ ++ G DA
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607
Query: 297 GSSLIHMYSKSGSLDDAWV 315
S +I+M G L+ +++
Sbjct: 608 ISMVINMLH-DGRLEKSYL 625
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 175/378 (46%), Gaps = 16/378 (4%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
+L M +G PN T V + L + M ++ADVV+ N+I+D
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 64 LKCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAG---DVEKSL-DMFRNLPSKDV 115
K + + A LF E+ +G +VVT++ +I G D + L DM + ++
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
V++N +ID ++ G A +L M++ + T+ ++ KQ+
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
+++ D ++L++ +CK R + + + +++ G G V + +++ G
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS----HRGLVGDTVTYTTLIQGLF 446
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY 295
+G ++ K F+ MV + DI T + ++ N G LE ++ Y+QK ++D Y
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGM 351
+ +++I K+G +DD W +F ++ +PNV + +MISG ++A +L + M
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 352 LNQGIVPNEVTFLGVINA 369
G +PN T+ +I A
Sbjct: 567 KEDGPLPNSGTYNTLIRA 584
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 182/435 (41%), Gaps = 51/435 (11%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ +L +M G P+ TLSS+ K + + M+ G D + +++
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 61 D-LYLKCKAFE---YAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK--- 113
L+L KA E +R+ + + ++VT+ +++ GD + +L++ + +
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 114 -DVVSWNTIIDGLIR---------------------------------CGYER--RALEL 137
DVV +NTIID L + C Y R A +L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 138 LFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCK 197
L M+E + VTF ++L+ +I +++ D F +SLV +C
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 198 CGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIV 257
R DKA + + ++ +V +N+++ G+ + + ED + FR M H +
Sbjct: 378 HDRLDKAKQMFE----FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 258 DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF 317
D T TT+I + G + +++ + G D S L+ +G L+ A +F
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 318 RQINEP----NVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHV 373
+ + +++++T+MI G GK LF + +G+ PN VT+ +I+
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Query: 374 GLLEEGSTYFRMMKD 388
LL+E + MK+
Sbjct: 554 RLLQEAYALLKKMKE 568
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 159/416 (38%), Gaps = 72/416 (17%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V SL +MQ YT + + C + L + M++ G + +V ++S+L
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDM-FRNLPSKDVVSWN 119
+ Y K A L V++ ++M +R D +++
Sbjct: 163 NGYCHGKRISDAVAL------------------------VDQMVEMGYR----PDTITFT 194
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
T+I GL A+ L+ MV+ G + + VT+ +L L ++
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP----WNSMVSGYV 235
+ D I +++++ CK D A LNL + + GI P ++S++S
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDA--------LNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY 295
G++ D + M+ + ++ T +I A G +F Y I ID
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG--KFVEAEKLYDDMIKRSID-- 362
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG 355
P++F + S+++G +H + +A +FE M+++
Sbjct: 363 ---------------------------PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 356 IVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGC 411
P+ VT+ +I +E+G+ FR M + V + T + L+ C
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 9/232 (3%)
Query: 255 AIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAW 314
A+ D + +CAN LE +++H + + R D + + +I M+ + S+ DA
Sbjct: 232 AMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAK 291
Query: 315 VIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVG 374
+F + + ++ W M+ + +G G A LFE M G+ PNE TFL V AC+ VG
Sbjct: 292 RVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVG 351
Query: 375 LLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSF 434
+EE +F MK+ + I+P EH ++ + G+ G L+E + +I + W++
Sbjct: 352 GIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAM 411
Query: 435 LSSCRLHKNIEMGKWVSEMLLQVAPS---------DPEAYILLSNMCTSNHR 477
+ RLH +I++ ++ E+++ V PS P +NM TS R
Sbjct: 412 RNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSR 463
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 57/103 (55%)
Query: 8 EMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCK 67
E+ KGA P++ +F+ C+ K+L+ K VH L++ D L N ++ ++ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 68 AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL 110
+ A+R+F+ + D+ +W++M+ AY G + +L +F +
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM 328
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 169/373 (45%), Gaps = 17/373 (4%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
S + M+ KG PN +++ KN+ L + + + ML G++ + + ++D +
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 64 LKCK----AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP-----SKD 114
K K A++ ++ E + V +N +I G K+ +M +NL S
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
S+N+IIDG ++ G A+E M ENG + VTF ++L ++
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTH 649
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
+ ++ L D +L++ +CK A + ++P G + +NS++SG+
Sbjct: 650 EMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP----ELGLMPNVSVYNSLISGF 705
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDA 294
GK + + ++ MV++ D+ T TT+I G + +++ + +G D
Sbjct: 706 RNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDE 765
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEG 350
+ L++ SK G A + ++ + PNV L++++I+G G +A L +
Sbjct: 766 ILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDE 825
Query: 351 MLNQGIVPNEVTF 363
ML +GIV ++ F
Sbjct: 826 MLEKGIVHDDTVF 838
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 119/563 (21%), Positives = 219/563 (38%), Gaps = 127/563 (22%)
Query: 1 MVFSLFREMQAKGACP-NQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSI 59
M L REM+ K P +Q T +SV E N++ V M+ G+ V+ S+
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 60 LDLYLKC----KAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV 115
++ Y K KA + R+ E D V +++M+ + ++EK+++ + + S +
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 116 ----VSWNTIIDGLIRCGYERRALE--------------------LLFC----------- 140
V +T+I G ++ ALE LLFC
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSF 471
Query: 141 ---MVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMY-- 195
M + G E + V + ++L + + ++ L +NF S L++ +
Sbjct: 472 LKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFK 531
Query: 196 ---------------------------------CKCGRTDKASVILKDVPLNLLRTGN-S 221
CK G+T KA +L+ NL++ S
Sbjct: 532 NKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ----NLIKEKRYS 587
Query: 222 GGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQM 281
+NS++ G+V G + ++T+R M ++ T T++I+ + ++ +M
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM 647
Query: 282 HAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE----PNV------------ 325
++ + ++D +LI + K + A+ +F ++ E PNV
Sbjct: 648 THEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRN 707
Query: 326 -----------------------FLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
F +T+MI G G AS L+ +L+ GIVP+E+
Sbjct: 708 LGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEIL 767
Query: 363 FLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET---KNFI 419
+ ++N S G + S MK + P V ++++ + R G L E + +
Sbjct: 768 HMVLVNGLSKKGQFLKASKMLEEMKK-KDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEM 826
Query: 420 FENGISHLTSVWKSFLSSCRLHK 442
E GI H +V+ + L S R+ K
Sbjct: 827 LEKGIVHDDTVF-NLLVSGRVEK 848
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 136/335 (40%), Gaps = 30/335 (8%)
Query: 53 VVLVNSILDLYLKCKAFEYAERLFE---LTG-EGDVVTWNIMIRAYLGAGDVEKSLDMFR 108
V VN++L ++ + A+ ++ L G GD VT +++RA L E+++ +FR
Sbjct: 204 VPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFR 263
Query: 109 NLPSK----DVVSWNTIIDGLIRCGYERRALELLFCMVEN-GTEFSEVTFXXXXXXXXXX 163
+ S+ D + ++ + + AL+LL M G S+ T+
Sbjct: 264 RVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKE 323
Query: 164 XXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGG 223
+E ++ ++ + +SLV YCK KA L+L G
Sbjct: 324 GNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA--------LDLFNRMEEEG 375
Query: 224 IVP----WNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGR 279
+ P ++ MV + N + E ++ + M V T+I C A E
Sbjct: 376 LAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL 435
Query: 280 QM--HAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMIS 333
++ ++ I H ++ + + ++ K G +D A + + EPNV + +M+
Sbjct: 436 EIFNDSFESWIAH---GFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMML 492
Query: 334 GCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
A S+F ML +G+ PN T+ +I+
Sbjct: 493 AHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 176/378 (46%), Gaps = 16/378 (4%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
+L M +G PN T V ++ L + M ++ADVV+ N+I+D
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 64 LKCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAG---DVEKSL-DMFRNLPSKDV 115
K + + A LF E+ +G +VVT++ +I G D + L DM + ++
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
V++N +ID ++ G A +L M++ + T+ ++ KQ+
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
+++ D ++L++ +CK R + + + +++ G G V + +++ G
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS----HRGLVGDTVTYTTLIQGLF 371
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY 295
+G ++ K F+ MV + DI T + ++ N G LE ++ Y+QK ++D Y
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGM 351
+ +++I K+G +DD W +F ++ +PNV + +MISG ++A +L + M
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Query: 352 LNQGIVPNEVTFLGVINA 369
G +P+ T+ +I A
Sbjct: 492 KEDGPLPDSGTYNTLIRA 509
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 150/329 (45%), Gaps = 12/329 (3%)
Query: 68 AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DVVSWNTIID 123
AF ++ E DVV +N +I + V+ +L++F+ + +K +VV+++++I
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
L G A +LL M+E + VTF ++LH +I +++
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
D F +SL+ +C R DKA + + ++ + +N+++ G+ + + ED
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFE----FMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
+ FR M H + D T TT+I + G + +++ + G D S L+
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 304 YSKSGSLDDAWVIFRQINEP----NVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
+G L+ A +F + + +++++T+MI G GK LF + +G+ PN
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 360 EVTFLGVINACSHVGLLEEGSTYFRMMKD 388
VT+ +I+ LL+E + MK+
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 165/416 (39%), Gaps = 72/416 (17%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V SL +MQ G N YT + + C + L + M++ G + +V ++S+L
Sbjct: 28 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 87
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDM-FRNLPSKDVVSWN 119
+ Y K A L V++ ++M +R D +++
Sbjct: 88 NGYCHGKRISDAVAL------------------------VDQMVEMGYR----PDTITFT 119
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
T+I GL A+ L+ MV+ G + + VT+ ++L L ++
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP----WNSMVSGYV 235
+ D I +++++ CK D A LNL + + GI P ++S++S
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDA--------LNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY 295
G++ D + M+ + ++ T +I A G ++H
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH------------- 278
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG 355
DD +I R I +P++F + S+I+G +H + +A +FE M+++
Sbjct: 279 ---------------DD--MIKRSI-DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 356 IVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGC 411
P+ T+ +I +E+G+ FR M + V + T + L+ C
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 184/399 (46%), Gaps = 16/399 (4%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V SL ++M+ G + YT + V C + L + ML+ G + D V + S++
Sbjct: 103 VVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLV 162
Query: 61 DLYLK----CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK--- 113
+ + + A +++ E+ + D+V +N +I + V + D F+ + K
Sbjct: 163 NGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIR 222
Query: 114 -DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
+VV++ +++GL A LL M++ + +T+ V K+L
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVS 232
++ ++++ D SSL+ C R D+A+ + D+ ++ G +V +N++++
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DL---MVSKGCLADVVSYNTLIN 338
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
G+ + ED +K FR M + + T T+I AG ++ ++ + + G
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQINEP----NVFLWTSMISGCALHGKGKQASSLF 348
D + + L+ +G L+ A VIF + + ++ +T++I G GK ++A SLF
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK 387
+ +G+ P+ VT+ +++ GLL E + MK
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 149/373 (39%), Gaps = 86/373 (23%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F F+E++ KG PN T +++ + + M++ + +V+ +++LD
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 63 YLKCKAFEYAERLFE----LTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----D 114
++K A+ LFE ++ + D+VT++ +I ++++ MF + SK D
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
VVS+NT+I+G + ++L M + G + VT+
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY--------------------- 368
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
++L++ + + G DKA + G S I +N ++ G
Sbjct: 369 --------------NTLIQGFFQAGDVDKAQEFFSQMDF----FGISPDIWTYNILLGGL 410
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDA 294
NG+ E L F M +DI T TTVI
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG-------------------------- 444
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEG 350
K+G +++AW +F ++ +P++ +T+M+SG G + +L+
Sbjct: 445 ---------MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Query: 351 MLNQGIVPNEVTF 363
M +G++ N+ T
Sbjct: 496 MKQEGLMKNDCTL 508
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 147/321 (45%), Gaps = 15/321 (4%)
Query: 105 DMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXX 164
DM ++ P +V +N ++ +++ + L M G TF
Sbjct: 75 DMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCF 134
Query: 165 XVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGR-TDKASVILKDVPLNLLRTGNSGG 223
V L + G+++ L D SLV +C+ R +D S++ K ++ G
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK-----MVEIGYKPD 189
Query: 224 IVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISA-CANAGLLEFGRQMH 282
IV +N+++ + D F+ + + ++ T T +++ C ++ + R +
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249
Query: 283 AYIQK-IGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCAL 337
I+K I + Y S+L+ + K+G + +A +F ++ +P++ ++S+I+G L
Sbjct: 250 DMIKKKITPNVITY--SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 338 HGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVE 397
H + +A+ +F+ M+++G + + V++ +IN +E+G FR M ++ V
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 398 HCTSMVDLYGRAGCLIETKNF 418
+ T ++ + +AG + + + F
Sbjct: 368 YNT-LIQGFFQAGDVDKAQEF 387
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 168/393 (42%), Gaps = 23/393 (5%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
L M G PN+ T V L + M + D V + I+D
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 65 KCKAFEYAERLF---ELTG-EGDVVTWNIMIRAYLGAG---DVEKSL-DMFRNLPSKDVV 116
K + + A LF E+ G + D++T+N +I + AG D K L DM + S +VV
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
+++ +ID ++ G R A +LL M++ G + +T+ +E Q+ +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
I+ + D + L+ YCK R D + +++ L G V +N++V G+
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR----GVIANTVTYNTLVQGFCQ 450
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
+GK E K F+ MV DI + ++ + G LE ++ I+K +D +
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFL----WTSMISGCALHGKGKQASSLFEGML 352
+IH + +DDAW +F + V L + MIS +A LF M
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 353 NQGIVPNEVTF-------LGVINACSHVGLLEE 378
+G P+E+T+ LG +A + L+EE
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 175/395 (44%), Gaps = 16/395 (4%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V +L ++M++KG + YTLS + C + L +++ G + D V+ N++L
Sbjct: 106 LVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL 165
Query: 61 D-LYLKCK---AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP----S 112
+ L L+C+ A E +R+ E+ + ++T N ++ G V ++ + +
Sbjct: 166 NGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQ 225
Query: 113 KDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
+ V++ +++ + + G A+ELL M E + V + ++ L
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVS 232
+ D ++L+ +C GR D + +L+D +++ S +V ++ ++
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD----MIKRKISPNVVTFSVLID 341
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
+V GK + + + M+ + T ++I LE QM + G
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLF 348
D + LI+ Y K+ +DD +FR+++ N + +++ G GK + A LF
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYF 383
+ M+++ + P+ V++ +++ G LE+ F
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/395 (20%), Positives = 168/395 (42%), Gaps = 16/395 (4%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
LFR+M P + +F + K +L + M G+ + ++ +++ +
Sbjct: 74 DLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCF 133
Query: 64 LKCKAFEYA----ERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP----SKDV 115
+C+ YA ++ +L E D V +N ++ V ++L++ + +
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
++ NT+++GL G A+ L+ MVE G + +EVT+ L +L +
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
+ + D S +++ CK G D A + ++ + G I+ +N+++ G+
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK----GFKADIITYNTLIGGFC 309
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY 295
G+++D K R M+ ++ T + +I + G L Q+ + + G +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 296 VGSSLIHMYSKSGSLDDAW----VIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGM 351
+SLI + K L++A ++ + +P++ + +I+G + LF M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 352 LNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM 386
+G++ N VT+ ++ G LE F+ M
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 174/382 (45%), Gaps = 24/382 (6%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
+L M KG P+ T V ++ L + M + ++ VV+ N+I+D
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 64 LKCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAG---DVEKSL-DMFRNLPSKDV 115
K A LF E+ +G +VVT+N +IR G D + L DM + +V
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
V+++ +ID ++ G A +L M++ + T+ ++ K +
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM--- 383
Query: 176 VITLALNGDNFIN----SSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMV 231
L ++ D F N ++L++ +CK R D+ + +++ + G G V + +++
Sbjct: 384 -FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS----QRGLVGNTVTYTTLI 438
Query: 232 SGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR 291
G+ + ++ F+ MV + + DI T + ++ N G +E + Y+Q+
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSL 347
D Y + +I K+G ++D W +F ++ +PNV +T+M+SG G ++A +L
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 348 FEGMLNQGIVPNEVTFLGVINA 369
F M +G +P+ T+ +I A
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRA 580
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 172/402 (42%), Gaps = 26/402 (6%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
SL +M G P+ +T +++ + M+ G D+V +++
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 64 LKCKAFEYAERLFELTGEGD----VVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DV 115
K + A L + +G VV +N +I A +V +L++F + +K +V
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
V++N++I L G A LL M+E + VTF + ++L+
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKAS-----VILKDVPLNLLRTGNSGGIVPWNSM 230
+I +++ D F SSL+ +C R D+A +I KD N +V +N++
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN---------VVTYNTL 402
Query: 231 VSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGH 290
+ G+ + ++ ++ FR M + + T TT+I A + + + + G
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 291 RIDAYVGSSLIHMYSKSGSLDDAWVIF----RQINEPNVFLWTSMISGCALHGKGKQASS 346
D S L+ +G ++ A V+F R EP+++ + MI G GK +
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 347 LFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
LF + +G+ PN VT+ +++ GL EE FR MK+
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 189/496 (38%), Gaps = 92/496 (18%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V SL +MQ G N YT S + C L L V A M++ G
Sbjct: 99 LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGY----------- 147
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP----SKDVV 116
E D+VT N ++ + + ++ + + D
Sbjct: 148 --------------------EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
++NT+I GL R A+ L+ MV G + VT+
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG---------------------- 225
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
+ +NG CK G D A +LK + + G +V +N+++
Sbjct: 226 --IVVNG-----------LCKRGDIDLALSLLKKMEQGKIEPG----VVIYNTIIDALCN 268
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGL-LEFGRQMHAYIQ-KIGHRIDA 294
D L F M ++ ++ T ++I N G + R + I+ KI +
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEG 350
+ S+LI + K G L +A ++ ++ +P++F ++S+I+G +H + +A +FE
Sbjct: 329 F--SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 351 MLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAG 410
M+++ PN VT+ +I ++EG FR M + V + T + +
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 411 CLIETKNFIFE----NGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAY- 465
C + +F+ +G+ + L + +E V E LQ + +P+ Y
Sbjct: 447 C--DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE-YLQRSKMEPDIYT 503
Query: 466 --ILLSNMCTSNHRWD 479
I++ MC + D
Sbjct: 504 YNIMIEGMCKAGKVED 519
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 170/375 (45%), Gaps = 13/375 (3%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
+L +M +G P+ T +V ++ L + M + A+VV+ N+I+D
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 64 LKCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DV 115
K + E A LF E+ +G +VVT+N +I G + + N+ K +V
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
V++N +ID + G A +L M++ + +T+ ++ KQ+
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
+++ + ++L+ +CKC R + + +++ + G G V + +++ G+
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS----QRGLVGNTVTYTTIIQGFF 444
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY 295
G + F+ MV DI T + ++ + G L+ + Y+QK ++ +
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQIN-EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQ 354
+ +++I K+G + +AW +F ++ +P+V + +MISG ++A LF M
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Query: 355 GIVPNEVTFLGVINA 369
G +PN T+ +I A
Sbjct: 565 GTLPNSGTYNTLIRA 579
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 190/472 (40%), Gaps = 93/472 (19%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V SL +MQ G + YT S C L L V A M++ G + D+V ++S+L
Sbjct: 101 LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLL 160
Query: 61 D------------------------------------LYLKCKAFEYAERLFELTGEG-- 82
+ L+L KA E + ++ G
Sbjct: 161 NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ 220
Query: 83 -DVVTWNIMIRAYLGAGDVEKSLDMFRNLPS----KDVVSWNTIIDGLIR---------- 127
D+VT+ ++ GD++ +L++ + + +VV +NTIID L +
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
Query: 128 -----------------------CGYER--RALELLFCMVENGTEFSEVTFXXXXXXXXX 162
C Y R A LL M+E + VTF
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Query: 163 XXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSG 222
+ ++LH +I +++ D + L+ +C R D+A + K ++
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK----FMVSKDCLP 396
Query: 223 GIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMH 282
I +N++++G+ + ED ++ FR M + + T TT+I AG + + +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV- 455
Query: 283 AYIQKIGHRI--DAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCA 336
+ Q + +R+ D S L+H G LD A VIF+ + E N+F++ +MI G
Sbjct: 456 -FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 337 LHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
GK +A LF + I P+ VT+ +I+ LL+E FR MK+
Sbjct: 515 KAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 167/402 (41%), Gaps = 103/402 (25%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAW---------MLRNGVDAD 52
S+F M+ G PN T ++V C GKG + M RNGV D
Sbjct: 287 AISVFNSMKEYGLRPNLVTYNAVIDAC--------GKGGMEFKQVAKFFDEMQRNGVQPD 338
Query: 53 VVLVNSILDLYLKCKAFEYAERLF-ELTG---EGDVVTWNIMIRAYLGAGDVEKSLDMFR 108
+ NS+L + + +E A LF E+T E DV ++N ++ A G ++ + ++
Sbjct: 339 RITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILA 398
Query: 109 NLPSK----DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXX 164
+P K +VVS++T+IDG + G AL L F E+
Sbjct: 399 QMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL----------FGEM------------- 435
Query: 165 XVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGI 224
R + +AL D ++L+ +Y K GR+++A IL++ + G +
Sbjct: 436 ----------RYLGIAL--DRVSYNTLLSIYTKVGRSEEALDILRE----MASVGIKKDV 479
Query: 225 VPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY 284
V +N+++ GY GKY++ K F M E + ++ T +T+I
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG---------------- 523
Query: 285 IQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGK 340
YSK G +A IFR+ +V L++++I +G
Sbjct: 524 -------------------YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 341 GKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTY 382
A SL + M +GI PN VT+ +I+A ++ + Y
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 159/394 (40%), Gaps = 86/394 (21%)
Query: 72 AERLFELT---GEGDVV-TWNIMIRAYLGAGDVEKSLDMFRNLPS----KDVVSWNTIID 123
A+R+FE G G+ V ++ +I AY +G E+++ +F ++ ++V++N +ID
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 124 GLIRCGYERRALELLFC-MVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
+ G E + + F M NG + +TF E + L + +
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYED 242
D F ++L++ CK G+ D A IL +P+ I+P
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR--------IMP---------------- 407
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
++ + +TVI A AG + + ++ +G +D ++L+
Sbjct: 408 ---------------NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 303 MYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
+Y+K G ++A I R++ + +V + +++ G GK + +F M + ++P
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP 512
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMK---------------DVYC------------ 391
N +T+ +I+ S GL +E FR K D C
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLI 572
Query: 392 -------INPGVEHCTSMVDLYGRAGCLIETKNF 418
I+P V S++D +GR+ + + ++
Sbjct: 573 DEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 155/412 (37%), Gaps = 72/412 (17%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V F EMQ G P++ T +S+ CS R G+
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCS----------------RGGL------------ 354
Query: 62 LYLKCKAFEYAERLF-ELTG---EGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK---- 113
+E A LF E+T E DV ++N ++ A G ++ + ++ +P K
Sbjct: 355 -------WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMP 407
Query: 114 DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
+VVS++T+IDG + G AL L M G V++ E +
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSG 233
+ ++ + D ++L+ Y K G+ D+ +K V + R ++ +++++ G
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDE----VKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 234 YVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG---- 289
Y G Y++ ++ FR D+ + +I A GL+ + + K G
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 290 -----HRIDAYVGSSLIHM---YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKG 341
IDA+ S+ + YS GSL + + E +
Sbjct: 584 VVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNN 643
Query: 342 KQASSLFEGM------------LNQ-GIVPNEVTFLGVINACSHVGLLEEGS 380
+ EGM ++Q I PN VTF ++NACS E+ S
Sbjct: 644 RTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDAS 695
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 17/148 (11%)
Query: 260 RTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
+ + +IS G + +++ G+ Y S+LI Y +SG ++A +F
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 320 INE----PNVFLWTSMISGCALHGKG----KQASSLFEGMLNQGIVPNEVTFLGVINACS 371
+ E PN+ + ++I C GKG KQ + F+ M G+ P+ +TF ++ CS
Sbjct: 294 MKEYGLRPNLVTYNAVIDAC---GKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCS 350
Query: 372 HVGLLEEGSTYF------RMMKDVYCIN 393
GL E F R+ +DV+ N
Sbjct: 351 RGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 194 MYCKCGRTDKASVILKDVPLNLLRTGNSGG----IVPWNSMVSGYVWNGKYEDCLKTFRS 249
M GR K ++ + + T +GG + +++++S Y +G +E+ + F S
Sbjct: 239 MISTLGRYGKVTIAKR-----IFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 250 MVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY---IQKIGHRIDAYVGSSLIHMYSK 306
M ++ T VI AC G+ EF +Q+ + +Q+ G + D +SL+ + S+
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGM-EF-KQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 307 SGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVT 362
G + A +F ++ E +VF + +++ G+ A + M + I+PN V+
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 363 FLGVINACSHVGLLEEGSTYFRMMK 387
+ VI+ + G +E F M+
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMR 436
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 176/400 (44%), Gaps = 16/400 (4%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V SLF +MQ G P T + V C M++ G + D+V S+L
Sbjct: 101 VVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLL 160
Query: 61 DLYLKCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAGDVEKSLDMFRNLPS---- 112
+ Y E A LF ++ G G +VVT+ +IR + ++++F + +
Sbjct: 161 NGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSR 220
Query: 113 KDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
+VV++N ++ GL G A LL M++ E + +TF + K+L
Sbjct: 221 PNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL 280
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVS 232
+ +I +++ D F SL+ C G D+A + + + R G V + +++
Sbjct: 281 YNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA----RQMFYLMERNGCYPNEVIYTTLIH 336
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
G+ + + ED +K F M + + + T T +I G + +++ +
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP 396
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQINEP----NVFLWTSMISGCALHGKGKQASSLF 348
D + L+ +G ++ A +IF + + N+ +T +I G GK + A LF
Sbjct: 397 DIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
+ ++G+ PN +T+ +I+ GL+ E + F+ MK+
Sbjct: 457 CSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 132/303 (43%), Gaps = 17/303 (5%)
Query: 192 VEMYCKC--GRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRS 249
+ M+C C + +AS L +++ G +V + S+++GY + ED + F
Sbjct: 123 IVMHCVCLSSQPCRASCFLG----KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQ 178
Query: 250 MVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGS 309
++ ++ T TT+I L ++ + G R + ++L+ + G
Sbjct: 179 ILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGR 238
Query: 310 LDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLG 365
DA + R + EPNV +T++I GK +A L+ M+ + P+ T+
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 366 VINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE---N 422
+IN GLL+E F +M+ C V + T+++ + ++ + + +E
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIY-TTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 423 GISHLTSVWKSFLSSCRLHKNIEMGKWV-SEMLLQVAPSDPEAY-ILLSNMCTSNHRWDE 480
G+ T + + L ++ + V ++M + AP D Y +LL +C N + ++
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC-CNGKVEK 416
Query: 481 AAM 483
A M
Sbjct: 417 ALM 419
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 169/377 (44%), Gaps = 17/377 (4%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+L +EM+ G PN +T + + ++ + + + ML G+ +V+ N++++
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 63 YLKCKAFEYAERLFELTGE----GDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----D 114
Y K E A + EL + T+N +I+ Y + +V K++ + + + D
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPD 461
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
VV++N++IDG R G A LL M + G + T+ VE L
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
+ +N + + ++L++ YCK G+ D+A ++L+ +L + +N+++ G
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE----KMLSKNCLPNSLTFNALIHGL 577
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDA 294
+GK ++ MV + T T +I G + + G + DA
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEG 350
+ ++ I Y + G L DA + ++ E P++F ++S+I G G+ A + +
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 351 MLNQGIVPNEVTFLGVI 367
M + G P++ TFL +I
Sbjct: 698 MRDTGCEPSQHTFLSLI 714
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 177/391 (45%), Gaps = 21/391 (5%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
++ EM CPN YT + + N++ + ++ G+D D S++ Y
Sbjct: 204 QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY 263
Query: 64 LKCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKD----V 115
+ K + A ++F E+ +G + V + +I A +++++D+F + + V
Sbjct: 264 CQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 116 VSWNTIIDGLIRCGYERR--ALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
++ +I L CG ER+ AL L+ M E G + + T+ E ++L
Sbjct: 324 RTYTVLIKSL--CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSG 233
G+++ L + ++L+ YCK G + A +++ + L S +N ++ G
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL----SPNTRTYNELIKG 437
Query: 234 YVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRID 293
Y + ++ + M+ + D+ T ++I +G + ++ + + G D
Sbjct: 438 YCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Query: 294 AYVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFE 349
+ +S+I KS +++A +F + + PNV ++T++I G GK +A + E
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 350 GMLNQGIVPNEVTFLGVINACSHVGLLEEGS 380
ML++ +PN +TF +I+ G L+E +
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 150/370 (40%), Gaps = 23/370 (6%)
Query: 38 KGVHAWMLRNGVDADVVLVNSILDLYLKC----KAFEYAERLFELTGEGDVVTWNIMIRA 93
K V+ ML + V ++ N +++ Y K +A +Y ++ E + D T+ +I
Sbjct: 203 KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG 262
Query: 94 YLGAGDVEKSLDMFRNLPSK----DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFS 149
Y D++ + +F +P K + V++ +I GL A++L M ++ +
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 150 EVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILK 209
T+ L + + + + L++ C + +KA +L
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 210 DVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISAC 269
+L G ++ +N++++GY G ED + M + RT +I
Sbjct: 383 ----QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 270 ANAGLLEFGRQMHAYIQKIGHR---IDAYVGSSLIHMYSKSGSLDDAWVIFRQINE---- 322
+ + + + K+ R D +SLI +SG+ D A+ + +N+
Sbjct: 439 CKSNV----HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 323 PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTY 382
P+ + +TSMI + ++A LF+ + +G+ PN V + +I+ G ++E
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 383 FRMMKDVYCI 392
M C+
Sbjct: 555 LEKMLSKNCL 564
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/420 (19%), Positives = 161/420 (38%), Gaps = 82/420 (19%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+ L M +G P+Q+T +S+ K ++ + + + GV+ +VV+ +++D
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 63 YLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTII 122
Y CKA G V ++M+ L + SL ++N +I
Sbjct: 542 Y--CKA-------------GKVDEAHLMLEKMLSKNCLPNSL------------TFNALI 574
Query: 123 DGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN 182
GL G + A L MV+ G + + T + ++++
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 183 GDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYE- 241
D ++ ++ YC+ GR A +D+ + G S + ++S++ GY G+
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDA----EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 242 --DCLK------------TFRSMV-HELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQ 286
D LK TF S++ H L + + + CA + ++EF + +
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 287 KIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
+ H + PN + +I G G + A
Sbjct: 751 MVEHSV-----------------------------TPNAKSYEKLILGICEVGNLRVAEK 781
Query: 347 LFEGML-NQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCIN--PGVEHCTSMV 403
+F+ M N+GI P+E+ F +++ C + E + +++ D+ C+ P +E C ++
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA---KVVDDMICVGHLPQLESCKVLI 838
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 110/228 (48%)
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
+ +GK + L T + +VD+ + + C A L+ + +H I +
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL 287
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGML 352
D L+ MYS G ++A +F +++E N+ W +I A +G G+ A +F
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 353 NQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCL 412
+G +P+ F G+ AC +G ++EG +F M Y I P +E S+V++Y G L
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407
Query: 413 IETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPS 460
E F+ + VW++ ++ R+H N+E+G + +E++ + P+
Sbjct: 408 DEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPT 455
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 169 GKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
K +HG++ + D N L+EMY CG ++A+ + + + L T W
Sbjct: 273 AKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLET--------WC 324
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACA-----NAGLLEFGRQMHA 283
++ + NG ED + F E I D + + AC + GLL F
Sbjct: 325 IIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRD 384
Query: 284 YIQKIGHRIDAYVGSSLIHMYSKSGSLDDAW-VIFRQINEPNVFLWTSMISGCALHG 339
Y I I+ YV SL+ MY+ G LD+A + R EPNV +W ++++ +HG
Sbjct: 385 Y--GIAPSIEDYV--SLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHG 437
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 175/400 (43%), Gaps = 24/400 (6%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
+L +M +G P+ T +V ++ L + M + ++ADVV+ N+I+D
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 64 LKCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAG---DVEKSL-DMFRNLPSKDV 115
K K + A LF E+ +G DV T++ +I G D + L DM + +V
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
V+++ +ID ++ G A +L M++ + T+ ++ K +
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM--- 385
Query: 176 VITLALNGDNFIN----SSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMV 231
L ++ D F N S+L++ +CK R ++ + +++ + G G V + +++
Sbjct: 386 -FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS----QRGLVGNTVTYTTLI 440
Query: 232 SGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR 291
G+ ++ F+ MV +I T ++ G L + Y+Q+
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSL 347
D Y + +I K+G ++D W +F ++ PNV + +MISG G ++A SL
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 348 FEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK 387
+ M G +PN T+ +I A G E + + M+
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 186/475 (39%), Gaps = 96/475 (20%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V SL +MQ G + YT S C L L V A M++ G + D+V ++S+L
Sbjct: 101 LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLL 160
Query: 61 D------------------------------------LYLKCKAFEYAERLFELTGEG-- 82
+ L+L KA E + ++ G
Sbjct: 161 NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ 220
Query: 83 -DVVTWNIMIRAYLGAGDVEKSLDMFRNLPS----KDVVSWNTIIDGLIR---------- 127
D+VT+ ++ GD++ +L + + + DVV +NTIIDGL +
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280
Query: 128 -----------------------CGYER--RALELLFCMVENGTEFSEVTFXXXXXXXXX 162
C Y R A LL M+E + VTF
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 163 XXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKAS-----VILKDVPLNLLR 217
+ ++L+ +I +++ D F SSL+ +C R D+A +I KD N
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN--- 397
Query: 218 TGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEF 277
+V +++++ G+ + E+ ++ FR M + + T TT+I A +
Sbjct: 398 ------VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 451
Query: 278 GRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF----RQINEPNVFLWTSMIS 333
+ + + +G + + L+ K+G L A V+F R EP+++ + MI
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 334 GCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
G GK + LF + +G+ PN + + +I+ G EE + + MK+
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 149/352 (42%), Gaps = 40/352 (11%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+LF EM KG P+ +T SS+ C + + M+ ++ +VV ++++D
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 63 YLKCKAFEYAERLFE----LTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKD---- 114
++K AE+L++ + + D+ T++ +I + ++++ MF + SKD
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
VV+++T+I G + +EL M + G + VT+ + + +
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILK------------------------- 209
+++++ ++ + + L++ CK G+ KA V+ +
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 210 ------DVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVT 263
++ NL G S ++ +N+M+SG+ G E+ + M + + + T
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577
Query: 264 TVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWV 315
T+I A G E ++ ++ G DA + +M G LD +++
Sbjct: 578 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSFL 628
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 171/397 (43%), Gaps = 24/397 (6%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+LF+EM P+ S F + K L + NG+ ++ +N +++
Sbjct: 73 IALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINC 132
Query: 63 YLKC--KAFEYA--ERLFELTGEGDVVTWNIMIRAYLGAGDVEKSL----DMFRNLPSKD 114
+ +C F Y+ ++ +L E D T+N +I+ G V +++ M N D
Sbjct: 133 FCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPD 192
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
VV++N+I++G+ R G AL+LL M E + T+ ++ L
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP----WNSM 230
+ T + +SLV CK G+ + +++LKD+ S IVP +N +
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV--------SREIVPNVITFNVL 304
Query: 231 VSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGH 290
+ +V GK ++ + ++ M+ +I T T++ L M + +
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 291 RIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASS 346
D +SLI Y +DD +FR I++ N ++ ++ G GK K A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 347 LFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYF 383
LF+ M++ G++P+ +T+ +++ G LE+ F
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 182/398 (45%), Gaps = 16/398 (4%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+S+ ++ G P+ T +++ K E + + M+ NG DVV NSI++
Sbjct: 143 YSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Query: 63 YLKCK----AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----D 114
+ A + ++ E + DV T++ +I + G ++ ++ +F+ + +K
Sbjct: 203 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 262
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
VV++N+++ GL + G LL MV + +TF ++ +L+
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
+IT ++ + ++L++ YC R +A+ +L D+ ++R S IV + S++ GY
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNML-DL---MVRNKCSPDIVTFTSLIKGY 378
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDA 294
+ +D +K FR++ + + T + ++ +G ++ ++ + G D
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQINEPN----VFLWTSMISGCALHGKGKQASSLFEG 350
L+ +G L+ A IF + + + ++T++I G GK + A +LF
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 351 MLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
+ +G+ PN +T+ +I+ G L E + R M++
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 168/395 (42%), Gaps = 16/395 (4%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
L M G P+ T +S+ + L + M V ADV ++I+D
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 65 KCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVV---- 116
+ + A LF E+ +G VVT+N ++R AG + +++ S+++V
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
++N ++D ++ G + A EL M+ G + +T+ + + +
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
+ + D +SL++ YC R D + + N+ + G V ++ +V G+
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR----NISKRGLVANAVTYSILVQGFCQ 415
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
+GK + + F+ MV + D+ T ++ + G LE ++ +QK + +
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGML 352
+++I K G ++DAW +F + +PNV +T MISG G +A+ L M
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 353 NQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK 387
G PN+ T+ +I A G L + MK
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 104/240 (43%), Gaps = 23/240 (9%)
Query: 191 LVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSM 250
++ +C+C +T A +L V ++ G +N+++ G GK + + M
Sbjct: 129 MINCFCRCCKTCFAYSVLGKV----MKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 251 VHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSL 310
V D+ T ++++ +G + +++ + D + S++I + G +
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 311 DDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGV 366
D A +F+++ + +V + S++ G GK + L + M+++ IVPN +TF +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 367 INACSHVGLLEEGSTYFRMM---------------KDVYCINPGVEHCTSMVDLYGRAGC 411
++ G L+E + ++ M D YC+ + +M+DL R C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 175/396 (44%), Gaps = 16/396 (4%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
+L M AKG P+ T V + L + M + ++ V++ N+I+D
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 64 LKCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAG---DVEKSL-DMFRNLPSKDV 115
K K + A LF E+ +G +VVT++ +I G D + L DM + DV
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
+++ +ID ++ G A +L MV+ + S VT+ ++ KQ+
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
+++ D ++L++ +CK R ++ + +++ + G G V +N ++ G
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS----QRGLVGNTVTYNILIQGLF 442
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY 295
G + + F+ MV + +I T T++ G LE + Y+Q+ Y
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGM 351
+ +I K+G ++D W +F ++ +P+V + +MISG G ++A +LF+ M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 352 LNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK 387
G +PN + +I A G E + + M+
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 190/463 (41%), Gaps = 64/463 (13%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V SL +MQ G N YT S + C L L V M++ G + ++V ++S+L
Sbjct: 99 VVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLL 158
Query: 61 D------------------------------------LYLKCKAFEYAERLFELTGEG-- 82
+ L+L KA E + + +G
Sbjct: 159 NGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ 218
Query: 83 -DVVTWNIMIRAYLGAGDVEKSLDMFRNLPS----KDVVSWNTIIDGLIRCGYERRALEL 137
D+VT+ +++ GD + + ++ + V+ +NTIIDGL + + AL L
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 138 LFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCK 197
M G + VT+ +L +I +N D F S+L++ + K
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 198 CGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIV 257
G+ +A + + +++ IV ++S+++G+ + + ++ + F MV +
Sbjct: 339 EGKLVEAEKLYDE----MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 258 DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF 317
D+ T T+I +E G ++ + + G + + LI ++G D A IF
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 318 RQINE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHV 373
+++ PN+ + +++ G +GK ++A +FE + + P T+ +I
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 374 GLLEEGSTYFRMMKDVYC------INPGVEHCTSMVDLYGRAG 410
G +E+G D++C + P V +M+ + R G
Sbjct: 515 GKVEDGW-------DLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 152/354 (42%), Gaps = 44/354 (12%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
+LF+EM+ KG PN T SS+ C + + M+ ++ DV ++++D
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 63 YLKCKAFEYAERLFE----LTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----D 114
++K AE+L++ + + +VT++ +I + ++++ MF + SK D
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 115 VVSWNTIIDGLIRCGYER--RALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
VV++NT+I G C Y+R +E+ M + G + VT+ ++ +++
Sbjct: 396 VVTYNTLIKGF--CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILK----------------------- 209
+++ + + ++L++ CK G+ +KA V+ +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 210 --------DVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRT 261
D+ NL G +V +N+M+SG+ G E+ F+ M + + +
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 262 VTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWV 315
T+I A G E ++ ++ G DA + +M G LD +++
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSFL 626
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 171/380 (45%), Gaps = 20/380 (5%)
Query: 4 SLFREMQAKGACPNQYTLSSVFK--CCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
+L M KG P+ T +V C E +L L + M + ++ADVV+ ++++D
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN--LLNKMEKGKIEADVVIYSTVID 248
Query: 62 LYLKCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAG---DVEKSL-DMFRNLPSK 113
K + + A LF E+ +G DV T++ +I G D + L DM +
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 114 DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
+VV++N++ID + G A +L M++ + + VT+ ++ +Q+
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSG 233
+++ D ++L+ +CK + + +D+ R G G V + +++ G
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS----RRGLVGNTVTYTTLIHG 424
Query: 234 YVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRID 293
+ ++ F+ MV + +I T T++ G LE + Y+QK D
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 294 AYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFE 349
Y + + K+G ++D W +F ++ +P+V + +MISG G ++A +LF
Sbjct: 485 IYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFI 544
Query: 350 GMLNQGIVPNEVTFLGVINA 369
M G +P+ T+ +I A
Sbjct: 545 KMKEDGPLPDSGTYNTLIRA 564
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 170/411 (41%), Gaps = 22/411 (5%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V S +M+ G N YT + + C L + M++ G +V +NS+L
Sbjct: 83 LVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLL 142
Query: 61 DLYLK----CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK--- 113
+ + +A +++ E+ + D VT+ ++ +++ + + K
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 202
Query: 114 -DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
D+V++ +I+GL + G AL LL M + E V + V+ L
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVS 232
+ + D F SSL+ C GR AS +L D +L + +V +NS++
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD----MLERKINPNVVTFNSLID 318
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
+ GK + K F M+ +I T ++I+ L+ +Q+ +
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQINEP----NVFLWTSMISGCALHGKGKQASSLF 348
D ++LI+ + K+ + D +FR ++ N +T++I G A +F
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYF------RMMKDVYCIN 393
+ M++ G+ PN +T+ +++ G LE+ F +M D+Y N
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 196/474 (41%), Gaps = 40/474 (8%)
Query: 33 NLQLGKGVHAW--MLRNGVDADVVLVNSILDLYLKCKAFE----YAERLFELTGEGDVVT 86
+L+L + V + M+++ +V + +L K K F+ + E++ L ++ T
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 87 WNIMIRAYLGAGDVEKSLDMFRNL------PSKDVVSWNTIIDGLIRCGYERRALELLFC 140
+NIMI + +L + + PS +V+ N++++G A+ L+
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPS--IVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 141 MVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGR 200
MVE G + VTF L R++ D +++ CK G
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 201 TDKASVILKDVPLNLLRTGNSGGI----VPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI 256
D A LNLL G I V +++++ +D L F M ++
Sbjct: 221 PDLA--------LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 257 VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVI 316
D+ T +++IS N G ++ + + + + +SLI ++K G L +A +
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 317 FRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSH 372
F ++ + PN+ + S+I+G +H + +A +F M+++ +P+ VT+ +IN
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 373 VGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE----NGISHLT 428
+ +G FR M + V + T + + + C + +F+ +G+
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC--DNAQMVFKQMVSDGVHPNI 450
Query: 429 SVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAY---ILLSNMCTSNHRWD 479
+ + L + +E V E LQ + +P+ Y I+ MC + D
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFE-YLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 155/348 (44%), Gaps = 14/348 (4%)
Query: 83 DVVTWNIMIRAYLGAGDVEKSLDMFRNLP----SKDVVSWNTIIDGLIRCGYE-RRALEL 137
DV ++ +I A+ +G +++++F+ + ++++N I++ + G + L
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 138 LFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCK 197
+ M +G T+ + Q+ + + D ++L+++Y K
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 198 CGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIV 257
R +A +L ++ LN G S IV +NS++S Y +G ++ ++ M +
Sbjct: 327 SHRPKEAMKVLNEMVLN----GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 258 DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF 317
D+ T TT++S AG +E + ++ G + + ++ I MY G + IF
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 318 RQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHV 373
+IN P++ W ++++ +G + S +F+ M G VP TF +I+A S
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 374 GLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
G E+ T +R M D + P + +++ R G +++ + E
Sbjct: 503 GSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 185/449 (41%), Gaps = 55/449 (12%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
+ SL +M++ G P+ YT +++ CC Q V M G D V N++LD
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 62 LYLKC-KAFEYAERLFELTGEG---DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK---- 113
+Y K + E + L E+ G +VT+N +I AY G +++++++ + K
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 114 DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
DV ++ T++ G R G A+ + M G + + TF ++
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP----WNS 229
+ L+ D ++L+ ++ + G + S + K++ G VP +N+
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM--------KRAGFVPERETFNT 494
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG 289
++S Y G +E + +R M+ D+ T TV++A A G+ E ++ A ++
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 290 HRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFE 349
+ + SL+H Y+ N + L S+ A ++
Sbjct: 555 CKPNELTYCSLLHAYA---------------NGKEIGLMHSL------------AEEVYS 587
Query: 350 GMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRA 409
G+ I P V ++ CS LL E F +K+ +P + SMV +YGR
Sbjct: 588 GV----IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE-RGFSPDITTLNSMVSIYGRR 642
Query: 410 GCLIETK---NFIFENGISHLTSVWKSFL 435
+ + +++ E G + + + S +
Sbjct: 643 QMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 175/428 (40%), Gaps = 52/428 (12%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
S+F EM+ G PN T ++ K + + G+ D+V N++L ++
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 64 LKCKAFEYAERLFELTGEGDVV----TWNIMIRAYLGAGDVEKSLDMFRNL----PSKDV 115
+ +F+ V T+N +I AY G E+++ ++R + + D+
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
++NT++ L R G ++ ++L M + + +E+T+ + L L
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
V + + + +LV + KC +A + L G S I NSMVS Y
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE----LKERGFSPDITTLNSMVSIY- 639
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY 295
G+ R MV A AN G+L+ Y+++ G
Sbjct: 640 --GR--------RQMV----------------AKAN-GVLD-------YMKERGFTPSMA 665
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQI----NEPNVFLWTSMISGCALHGKGKQASSLFEGM 351
+SL++M+S+S + I R+I +P++ + ++I + + + AS +F M
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Query: 352 LNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGC 411
N GIVP+ +T+ I + + + EE R M C P S+VD Y +
Sbjct: 726 RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGC-RPNQNTYNSIVDGYCKLNR 784
Query: 412 LIETKNFI 419
E K F+
Sbjct: 785 KDEAKLFV 792
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 12/220 (5%)
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHE---LAIVDIRTVTTVISACANAGLLEFGRQMHAYI 285
+ + G ++ K++ L+ F + + +++D V +IS G + M +
Sbjct: 140 AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGL 199
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKG 341
Q+ G +D Y +SLI ++ SG +A +F+++ E P + + +++ G
Sbjct: 200 QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP 259
Query: 342 -KQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCT 400
+ +SL E M + GI P+ T+ +I C L +E + F MK V +
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY-N 318
Query: 401 SMVDLYGRAGCLIETKNFIFE---NGISHLTSVWKSFLSS 437
+++D+YG++ E + E NG S + S +S+
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 170/396 (42%), Gaps = 16/396 (4%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
LFR+M P S +F + K L + M G+ ++ ++ +++
Sbjct: 73 IDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINC 132
Query: 63 YLKCK----AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL----PSKD 114
+ +C+ AF ++ +L E + +T++ +I G V ++L++ + D
Sbjct: 133 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD 192
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
+++ NT+++GL G E A+ L+ MVE G + + VT+ L +L
Sbjct: 193 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLR 252
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
++ + D S +++ CK G D A + ++ + G + I+ +N ++ G+
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK----GITTNIITYNILIGGF 308
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDA 294
G+++D K R M+ ++ T + +I + G L ++H + G D
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 295 YVGSSLIHMYSKSGSLDDAW----VIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEG 350
+SLI + K LD A ++ + +PN+ + +I+G + LF
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 351 MLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM 386
M +G+V + VT+ +I +G L F+ M
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 162/393 (41%), Gaps = 23/393 (5%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
L +M G PN T V L + M + D V + I+D
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 65 KCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAG---DVEKSL-DMFRNLPSKDVV 116
K + + A LF E+ +G +++T+NI+I + AG D K L DM + + +VV
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
+++ +ID ++ G R A EL M+ G +T+ ++ Q+ +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
++ + + + L+ YCK R D + + + L G V +N+++ G+
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR----GVVADTVTYNTLIQGFCE 450
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
GK + F+ MV +I T ++ + G E ++ I+K +D +
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGML 352
+ +IH + +DDAW +F + +P V + MI G G +A LF M
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 353 NQGIVPNEVTF-------LGVINACSHVGLLEE 378
G P+ T+ LG +A V L+EE
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/487 (19%), Positives = 190/487 (39%), Gaps = 63/487 (12%)
Query: 35 QLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAY 94
Q+ K V +L G + L+N +L C ER F + ++ ++ +R+
Sbjct: 12 QVSKFVQPRLLETGT-LRIALINCPNELSFCC------ERGFSAFSDRNL-SYRERLRSG 63
Query: 95 LGAGDVEKSLDMFRNL----PSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSE 150
L + ++D+FR++ P V+ ++ + + + L L M G +
Sbjct: 64 LVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNL 123
Query: 151 VTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKD 210
T + L G++I L + S+L+ C GR +A ++
Sbjct: 124 YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD- 182
Query: 211 VPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACA 270
++ G+ ++ N++V+G +GK + + MV + T V++
Sbjct: 183 ---RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 271 NAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF------------- 317
+G ++ +++ ++DA S +I K GSLD+A+ +F
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 318 ---------------------------RQINEPNVFLWTSMISGCALHGKGKQASSLFEG 350
R+IN PNV ++ +I GK ++A L +
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKIN-PNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 351 MLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAG 410
M+++GI P+ +T+ +I+ L++ + +M C +P + +++ Y +A
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC-DPNIRTFNILINGYCKAN 417
Query: 411 CL---IETKNFIFENGISHLTSVWKSFLSS-CRLHKNIEMGKWVSEMLLQVAPSDPEAY- 465
+ +E + G+ T + + + C L K + EM+ + P + Y
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 466 ILLSNMC 472
ILL +C
Sbjct: 478 ILLDGLC 484
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 159/386 (41%), Gaps = 26/386 (6%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
L M G P++ T V N L + M + A VV + ++D
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 65 KCKAFEYAERLF---ELTG-EGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DVV 116
K +F+ A LF E+ G + DVVT++ +I G + M R + + DVV
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
+++ +ID ++ G A EL M+ G +T+ + Q+ +
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP----WNSMVS 232
++ D S L+ YCK R D + L R +S G++P +N++V
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDG--------MRLFREISSKGLIPNTITYNTLVL 428
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
G+ +GK + F+ MV + T ++ + G L ++ +QK +
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLF 348
+ + +IH + +DDAW +F +++ P+V + MI G G +A LF
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVG 374
M G P++ T+ +I A H+G
Sbjct: 549 RKMKEDGCTPDDFTYNILIRA--HLG 572
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 173/432 (40%), Gaps = 51/432 (11%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
LF M P + + + K L G M NG++ D+ + +++
Sbjct: 55 IDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINC 114
Query: 63 YLKCK----AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL----PSKD 114
Y + K AF R ++L E D +T++ ++ + G V +++ + + D
Sbjct: 115 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
+V+ +T+I+GL G AL L+ MVE G + EVT+ L L
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 234
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
++ + S +++ CK G D A + ++ + G +V ++S++ G
Sbjct: 235 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK----GIKADVVTYSSLIGGL 290
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAG-LLEF---------------- 277
+GK++D K R M+ I D+ T + +I G LLE
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 278 ------------------GRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ 319
QM + G D S LI+ Y K+ +DD +FR+
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 320 INE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGL 375
I+ PN + +++ G GK A LF+ M+++G+ P+ VT+ +++ G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 376 LEEGSTYFRMMK 387
L + F M+
Sbjct: 471 LNKALEIFEKMQ 482
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 144/366 (39%), Gaps = 28/366 (7%)
Query: 125 LIRCGYERRALELLFCMV----ENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+I C ++ L F ++ + G E +TF V L R++ +
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
D S+L+ C GR +A V++ ++ G V + +++ +G
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLID----RMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
L FR M + + VI + G + + ++ G + D SSL
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 301 IHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
I G DD + R++ P+V ++++I GK +A L+ M+ +GI
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCL---- 412
P+ +T+ +I+ L E + F +M C P + + +++ Y +A +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC-EPDIVTYSILINSYCKAKRVDDGM 405
Query: 413 -----IETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPSDPEAY-I 466
I +K I N I++ T V F S +L+ E+ EM+ + P Y I
Sbjct: 406 RLFREISSKGLI-PNTITYNTLVL-GFCQSGKLNAAKEL---FQEMVSRGVPPSVVTYGI 460
Query: 467 LLSNMC 472
LL +C
Sbjct: 461 LLDGLC 466
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 171/402 (42%), Gaps = 48/402 (11%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V SLF M+ G + Y+ + V C + V M++ G + DVV V+S++
Sbjct: 87 LVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLI 146
Query: 61 DLYLK----CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMF----RNLPS 112
+ + + A + ++ E+ DVV +N +I G V ++++F R+
Sbjct: 147 NGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR 206
Query: 113 KDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
D V++N+++ GL G A L+ MV + +TF +L
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVS 232
+ + ++ D F +SL+ C GR D+A +L ++ G +V +N++++
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD----LMVTKGCLPDVVTYNTLIN 322
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI------- 285
G+ + + ++ K FR M + D T T+I AG + +++ + +
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIR 382
Query: 286 -------------------------QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQI 320
QK +D + +IH K G+++DAW +FR +
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442
Query: 321 N----EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
+ +P+V +T+MISG + ++ L+ M G++P
Sbjct: 443 SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 180/413 (43%), Gaps = 14/413 (3%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF +M P+ S V + KN L + M G+ D+ N +++
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 65 KCKAFEYA----ERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS----KDVV 116
+C F A ++ + E DVVT + +I + V ++D+ + DVV
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
+NTIIDG + G A+EL M +G VT+ +L +
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
+ + + +++++++ K G+ +A + ++ + R + +NS+++G
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE----MTRRCVDPDVFTYNSLINGLCM 291
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
+G+ ++ + MV + + D+ T T+I+ + ++ G ++ + + G D
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 297 GSSLIHMYSKSGSLDDAWVIF-RQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG 355
+++I Y ++G D A IF R + PN+ ++ ++ G ++ + ++A LFE M
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411
Query: 356 IVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGR 408
I + T+ VI+ +G +E+ FR + + P V T+M+ + R
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLS-CKGLKPDVVSYTTMISGFCR 463
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 111/286 (38%), Gaps = 29/286 (10%)
Query: 138 LFC-MVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYC 196
LFC M+++ S V F +L L + + D + + ++ C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 197 KCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAI 256
+C R VI V +++ G +V +S+++G+ + D + M
Sbjct: 116 RCSRF----VIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171
Query: 257 VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVI 316
D+ T+I GL+ ++ +++ G R DA +SL+ SG DA +
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 317 FRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSH 372
R + PNV +T++I GK +A L+E M + + P+ T+ +IN
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING--- 288
Query: 373 VGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNF 418
C++ V+ M+DL GCL + +
Sbjct: 289 -----------------LCMHGRVDEAKQMLDLMVTKGCLPDVVTY 317
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 171/416 (41%), Gaps = 76/416 (18%)
Query: 48 GVDADVVLVNSILDLYLKCKAFEYAERLF-ELTGEGD---VVTWNIMIRAYLGAGDVEKS 103
G++AD+V+ S++ + C + + LF E+ GD +T+N +IR + G ++++
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 104 LDMFRNLPSK----DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXX 159
++F + + +V ++ +IDGL G + AL+LL M+E E + VT+
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 160 -------XXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKAS----VIL 208
VEL K+ R DN + L+ C G D+AS ++L
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTR-------PDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 209 KDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISA 268
KD + ++ +N+++ G + L + +V +L D T ++++
Sbjct: 415 KD------SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Query: 269 CANAGLLEFGRQMHAYIQ----KIGHRIDAYVG--------------------------- 297
AG + + M + Q KI D Y
Sbjct: 469 TLKAG--DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526
Query: 298 ------SSLIHMYSKSGSLDDAWVIFRQI----NEPNVFLWTSMISGCALHGKGKQASSL 347
+ L+ K GSLD AW +F ++ N P+V + MI G G K A SL
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Query: 348 FEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMV 403
GM G+ P+ T+ +IN +G L+E ++F M D P C S++
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD-SGFEPDAHICDSVL 641
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/441 (20%), Positives = 185/441 (41%), Gaps = 19/441 (4%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ FS +R+M N +LS + +C + GV A ML+ G +V N +L
Sbjct: 90 LAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILL 149
Query: 61 D---LYLKC-KAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP----S 112
L+C KA + + DV ++N +IR + ++EK+L++ + S
Sbjct: 150 KGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCS 209
Query: 113 KDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
+V+W +ID + G A+ L M G E V + ++ GK L
Sbjct: 210 WSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL 269
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVS 232
V+ + ++L+ +CK G+ +AS I + ++ G + + ++
Sbjct: 270 FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE----FMIERGVRPNVYTYTGLID 325
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
G GK ++ L+ M+ + + T +I+ GL+ ++ ++K R
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 293 DAYVGSSLIHMYSKSGSLDDA----WVIFRQ--INEPNVFLWTSMISGCALHGKGKQASS 346
D + L+ G LD+A +++ + +P+V + ++I G + QA
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 347 LFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLY 406
+++ ++ + + VT ++N+ G + + ++ + D + + T+M+D +
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY-TAMIDGF 504
Query: 407 GRAGCLIETKNFIFENGISHL 427
+ G L K + + +S L
Sbjct: 505 CKTGMLNVAKGLLCKMRVSEL 525
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 209/490 (42%), Gaps = 26/490 (5%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V SL +MQ G N YT S L L + M++ G +V +NS+L
Sbjct: 93 LVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLL 152
Query: 61 DLYLK----CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK--- 113
+ + +A +++ E+ + D VT+ ++ +++ + + K
Sbjct: 153 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 212
Query: 114 -DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
D+V++ +I+GL + G AL LL M + E V + ++ L
Sbjct: 213 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDL 272
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVS 232
++ T + D F + L+ C GR AS +L D +L + +V +N+++
Sbjct: 273 FNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD----MLEKNINPDLVFFNALID 328
Query: 233 GYVWNGKYEDCLKTFRSMVH-ELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR 291
+V GK + K + MV + D+ T+I +E G ++ + + G
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQI----NEPNVFLWTSMISGCALHGKGKQASSL 347
+ ++LIH + ++ D+A ++F+Q+ P++ + ++ G +G + A +
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 348 FEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYG 407
FE M + + + VT+ +I A G +E+G F + + + P V T+M+ +
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS-LKGVKPNVVTYTTMMSGFC 507
Query: 408 RAGCLIETKNFIF----ENGISHLTSVWKSFLSSCRLHKNIEM--GKWVSEMLLQVAPSD 461
R G L E + +F E+G + + + + + RL E + + EM D
Sbjct: 508 RKG-LKEEADALFVEMKEDGPLPNSGTYNTLIRA-RLRDGDEAASAELIKEMRSCGFAGD 565
Query: 462 PEAYILLSNM 471
+ L++NM
Sbjct: 566 ASTFGLVTNM 575
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 160/393 (40%), Gaps = 23/393 (5%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
L M G PN+ T V K L + M + D V + I+D
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 65 KCKAFEYAERLF---ELTG-EGDVVTWNIMIRAYLGAG---DVEKSL-DMFRNLPSKDVV 116
K + + A LF E+ G + D++ + +IR + AG D K L DM + + DVV
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
+++ +ID ++ G R A EL M++ G VT+ ++ + +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
++ + + L+ YCK D + + + L G V +N+++ G+
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR----GVVADTVTYNTLIQGFCE 434
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
GK E + F+ MV DI + ++ + G E ++ I+K +D +
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGML 352
+ +IH + +DDAW +F + +P+V + MI G G +A LF M
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 353 NQGIVPNEVTF-------LGVINACSHVGLLEE 378
G PN T+ LG +A L+EE
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 158/394 (40%), Gaps = 43/394 (10%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V L ++M+ KG N YTLS + CC + L L
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSL------------------------ 125
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNL----PSKDVV 116
AF ++ +L E D VT++ +I G V ++L++ + ++
Sbjct: 126 -------AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
+ N +++GL G A+ L+ MVE G + +EVT+ L +L ++
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
+ D S +++ CK G D A + ++ + G I+ + +++ G+ +
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK----GFKADIIIYTTLIRGFCY 294
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
G+++D K R M+ D+ + +I G L ++H + + G D
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGML 352
+SLI + K LD A + + PN+ + +I+G LF M
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 353 NQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM 386
+G+V + VT+ +I +G LE F+ M
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 127/326 (38%), Gaps = 47/326 (14%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
L R+M + P+ S++ C E L+ + +H M++ G+ D V S++D +
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 64 LKCKAFEYAERLFEL---TGEG-DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DV 115
K + A + +L G G ++ T+NI+I Y A ++ L++FR + + D
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
V++NT+I G G +E+ K+L
Sbjct: 423 VTYNTLIQGFCELG-----------------------------------KLEVAKELFQE 447
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
+++ + D L++ C G +KA I + + ++ I +N ++ G
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE----KSKMELDIGIYNIIIHGMC 503
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY 295
K +D F S+ + D++T +I G L + +++ GH +
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQIN 321
+ LI + G + + +I
Sbjct: 564 TYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 161/414 (38%), Gaps = 53/414 (12%)
Query: 105 DMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXX 164
+M R+ P ++ ++ + + R L+L M G + T
Sbjct: 62 EMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCR 121
Query: 165 XVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGI 224
+ L G++I L D S+L+ C GR +A ++ ++ G+ +
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD----RMVEMGHKPTL 177
Query: 225 VPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAY 284
+ N++V+G NGK D + MV + T V+ +G ++
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 285 IQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN----------------------- 321
+++ ++DA S +I K GSLD+A+ +F ++
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 322 ----------------EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLG 365
P+V ++++I GK ++A L + M+ +GI P+ VT+
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 366 VINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFEN--- 422
+I+ L++ + +M C P + +++ Y +A LI+ +F
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGC-GPNIRTFNILINGYCKAN-LIDDGLELFRKMSL 415
Query: 423 -GISHLTSVWKSFLSS-CRLHKNIEMGKWV-SEMLLQVAPSDPEAY-ILLSNMC 472
G+ T + + + C L K +E+ K + EM+ + D +Y ILL +C
Sbjct: 416 RGVVADTVTYNTLIQGFCELGK-LEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 170/413 (41%), Gaps = 61/413 (14%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFK-CCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
FS+ REM +G P+ T S V C+A K ++L + M R G+ ADV ++D
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASK-MELAFLLFEEMKRGGLVADVYTYTIMVD 526
Query: 62 LYLKCKAFEYAERLF----ELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK---- 113
+ K E A + F E+ +VVT+ +I AYL A V + ++F + S+
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586
Query: 114 DVVSWNTIIDGLIRCGYERRALELLFCMV----------------ENGTEFSEVTFXXXX 157
++V+++ +IDG + G +A ++ M +N + VT+
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646
Query: 158 XXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLR 217
VE ++L + + + +L++ CK G+ D+A ++V +
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA----QEVKTEMSE 702
Query: 218 TGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEF 277
G + ++S++ Y + + K M+ ++ T +I GL +
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID-----GLCKV 757
Query: 278 GRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCAL 337
G+ AY L+ M + G +PNV +T+MI G +
Sbjct: 758 GKTDEAY--------------KLMQMMEEKGC------------QPNVVTYTAMIDGFGM 791
Query: 338 HGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVY 390
GK + L E M ++G+ PN VT+ +I+ C G L+ MK +
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 152/425 (35%), Gaps = 87/425 (20%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
+ EM A G N+ +SS +C + + V M+ G D + +L+
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495
Query: 66 CKAFEYAERLFELTGEG----DVVTWNIMIRAYLGAGDVEKSLDMFRNLP----SKDVVS 117
E A LFE G DV T+ IM+ ++ AG +E++ F + + +VV+
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 118 WNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
+ +I ++ A EL M+ G + VT+
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY------------------------ 591
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVIL------KDVP------LNLLRTGNSGGIV 225
S+L++ +CK G+ +KA I KDVP +V
Sbjct: 592 -----------SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 226 PWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI 285
+ +++ G+ + + E+ K +M E + +I G L+ +++ +
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQAS 345
+ G Y SSLI Y K D AS
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQD-------------------------------LAS 729
Query: 346 SLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDL 405
+ ML PN V + +I+ VG +E +MM++ C P V T+M+D
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC-QPNVVTYTAMIDG 788
Query: 406 YGRAG 410
+G G
Sbjct: 789 FGMIG 793
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 156/402 (38%), Gaps = 48/402 (11%)
Query: 4 SLFRE-------MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLV 56
SLF E M+A PN T S++ C +K L K V M+ G +
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 57 NSILDLYLKCKAFEYAERLF-ELTGEGDV---VTWNIMIRAYLGAGD------VEKSLDM 106
NS++ Y YA +L ++ G + V +NI+I + G D ++ +
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 107 FRNLPSKDVVSWNTIIDGLIRC----GYERRALELLFCMVENGTEFSEVTFXXXXXXXXX 162
+ + + VV + RC G +A ++ M+ G T+
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495
Query: 163 XXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSG 222
+EL L + L D + + +V+ +CK G ++A + + G +
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE----MREVGCTP 551
Query: 223 GIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMH 282
+V + +++ Y+ K + F +M+ E + +I T + +I AG +E Q
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ-- 609
Query: 283 AYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALH 338
+ S + D + F+Q ++ PNV + +++ G
Sbjct: 610 -----------------IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 339 GKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGS 380
+ ++A L + M +G PN++ + +I+ VG L+E
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 180/390 (46%), Gaps = 26/390 (6%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ +LF +M+ KG PN T +++ + + G + M G++ +++ N ++
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVI 282
Query: 61 D-LYLKCKAFEYAERLFELTGEG---DVVTWNIMIRAYLGAGDVEKSL----DMFRNLPS 112
+ L + + E + L E+ G D VT+N +I+ Y G+ ++L +M R+ +
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 113 KDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
V+++ ++I + + G RA+E L M G +E T+ + G
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS-----QKGYMN 397
Query: 173 HGRVITLALNGDNFINS-----SLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPW 227
+ +N + F S +L+ +C G+ + A +L+D+ G S +V +
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK----EKGLSPDVVSY 453
Query: 228 NSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQK 287
++++SG+ + ++ L+ R MV + D T +++I + ++ + +
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 288 IGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQ 343
+G D + ++LI+ Y G L+ A + ++ E P+V ++ +I+G + ++
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 344 ASSLFEGMLNQGIVPNEVTFLGVINACSHV 373
A L + + VP++VT+ +I CS++
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 167/394 (42%), Gaps = 25/394 (6%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCC-SAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
S+ QA G P + ++V +++N+ + V ML + V +V N ++
Sbjct: 154 LSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIR 213
Query: 62 LYLKCKAFEYAERLFE-LTGEG---DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK---- 113
+ + A LF+ + +G +VVT+N +I Y ++ + R++ K
Sbjct: 214 GFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEP 273
Query: 114 DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
+++S+N +I+GL R G + +L M G EVT+ +H
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP----WNS 229
++ L +SL+ CK G ++A L + + G+ P + +
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR--------GLCPNERTYTT 385
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG 289
+V G+ G + + R M + T +I+ G +E + +++ G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 290 HRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQAS 345
D S+++ + +S +D+A + R++ E P+ ++S+I G + K+A
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 346 SLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
L+E ML G+ P+E T+ +INA G LE+
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 178/378 (47%), Gaps = 18/378 (4%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
++F+EM PN +T + + + N+ + + M G +VV N+++D Y
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 64 LKCKAFEYAERLFE---LTG-EGDVVTWNIMIRAYLGAGDVEKS----LDMFRNLPSKDV 115
K + + +L L G E +++++N++I G +++ +M R S D
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
V++NT+I G + G +AL + M+ +G S +T+ + + +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
+ L + ++LV+ + + G ++A +L+++ N G S +V +N++++G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN----GFSPSVVTYNALINGHC 426
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISA-CANAGLLEFGRQMHAYIQKIGHRIDA 294
GK ED + M + D+ + +TV+S C + + E R ++K G + D
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDT 485
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEG 350
SSLI + + +A ++ ++ P+ F +T++I+ + G ++A L
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 351 MLNQGIVPNEVTFLGVIN 368
M+ +G++P+ VT+ +IN
Sbjct: 546 MVEKGVLPDVVTYSVLIN 563
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 117/284 (41%), Gaps = 13/284 (4%)
Query: 210 DVPLNLLRTGNSGGIVP----WNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTV 265
DV L L + G +P +N+++ GY K +D K RSM + ++ + V
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 266 ISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVI----FRQIN 321
I+ G ++ + + + G+ +D ++LI Y K G+ A V+ R
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 322 EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGST 381
P+V +TS+I G +A + M +G+ PNE T+ +++ S G + E
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 382 YFRMMKDVYCINPGVEHCTSMVD---LYGRAGCLIETKNFIFENGISHLTSVWKSFLSS- 437
R M D +P V ++++ + G+ I + E G+S + + LS
Sbjct: 402 VLREMND-NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 438 CRLHKNIEMGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
CR + E + EM+ + D Y L R EA
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 152/333 (45%), Gaps = 17/333 (5%)
Query: 44 MLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEG----DVVTWNIMIRAYLGAGD 99
M NG++ + N +++ + + AER+FE+ G D+VT+N MI+ Y AG
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 100 VEKSLDMFRNLPSK----DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXX 155
+K+++ R++ ++ D +++ T+I + L M E G + F
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 156 XXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNL 215
+ G + +I + I + L++ Y K G + A +L +
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH----RM 388
Query: 216 LRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLL 275
+ G +V ++ +V+G NG+ E+ L F + + ++ +++I AG +
Sbjct: 389 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRV 448
Query: 276 EFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEP-----NVFLWTS 330
+ ++ + + G D+Y ++LI ++K +D+A +F+++ E V+ +T
Sbjct: 449 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTI 508
Query: 331 MISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
++SG + ++A L++ M+++GI P F
Sbjct: 509 LLSGMFKEHRNEEALKLWDMMIDKGITPTAACF 541
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 18/271 (6%)
Query: 224 IVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHA 283
IV +N+M+ GY G+ + ++ R M D T T+I AC +FG +
Sbjct: 257 IVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS--DFGSCVAL 314
Query: 284 Y--IQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF----RQINEPNVFLWTSMISGCAL 337
Y + + G ++ + S +I K G L++ + +F R+ ++PNV ++T +I G A
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 338 HGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK-DVYCINPGV 396
G + A L M+++G P+ VT+ V+N G +EE YF + D IN
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 434
Query: 397 EHCTSMVDLYGRAGCLIETKNF---IFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEM 453
+S++D G+AG + E + + E G + + + + + + H+ ++ + +
Sbjct: 435 Y--SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR 492
Query: 454 LLQVAPSDPEAY---ILLSNMCTSNHRWDEA 481
+ + D Y ILLS M HR +EA
Sbjct: 493 MEEEEGCDQTVYTYTILLSGM-FKEHRNEEA 522
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
+L++EM KG + S V E L G V M+R G +V + ++D Y
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 64 LKCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAGDVEKSLDMFRNLP----SKDV 115
K + E A RL + EG DVVT+++++ G VE++LD F + +
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINS 432
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENG 145
+ ++++IDGL + G A L M E G
Sbjct: 433 MFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 110/490 (22%), Positives = 203/490 (41%), Gaps = 25/490 (5%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
M + F E++A G P++ T +S+ L + + +N N+++
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 61 DLYLKCKAFEYAERLFELT-GEGD---VVTWNIMIRAYLGAGDVEKSLDMFRNLP---SK 113
Y F+ A L E +G V+ +N ++ G V+++L +F + +
Sbjct: 316 MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP 375
Query: 114 DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
++ ++N +ID L R G A EL M + G + T ++ +
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSG 233
+ D SL++ K GR D A + + + + RT + + + S++
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS----IVYTSLIKN 491
Query: 234 YVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRID 293
+ +G+ ED K ++ M+++ D++ + T + AG E GR M I+ D
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551
Query: 294 AYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTS----MISGCALHGKGKQASSLFE 349
A S LIH K+G ++ + +F + E L T +I G GK +A L E
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 350 GMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRA 409
M +G P VT+ VI+ + + L+E F K I V +S++D +G+
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR-IELNVVIYSSLIDGFGKV 670
Query: 410 GCLIETK---NFIFENGISHLTSVWKSFLSSCRLHKNIEMGK----WVSEMLLQVAPSDP 462
G + E + + G++ W S L + L K E+ + + S L+ P+
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDA--LVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 463 EAYILLSNMC 472
IL++ +C
Sbjct: 729 TYGILINGLC 738
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 160/361 (44%), Gaps = 26/361 (7%)
Query: 37 GKGVHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGE----GDVVTWNIMIR 92
G ++ M+ D+ L+N+ +D K E +FE D +++I+I
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 93 AYLGAGDVEKSLDMFRNLPSK----DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEF 148
+ AG ++ ++F ++ + D ++N +IDG +CG +A +LL M G E
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 149 SEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVIL 208
+ VT+ ++ L + + + I SSL++ + K GR D+A +IL
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 209 KDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISA 268
++ L++ G + + WNS++ V + + L F+SM + T +I+
Sbjct: 681 EE----LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILIN- 735
Query: 269 CANAGLLEFGRQMHAYI-----QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE- 322
GL + + A++ QK G + +++I +K+G++ +A +F +
Sbjct: 736 ----GLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Query: 323 ---PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
P+ + +MI G + + A SLFE +G+ + T + +++ LE+
Sbjct: 792 GGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Query: 380 S 380
+
Sbjct: 852 A 852
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 176/408 (43%), Gaps = 25/408 (6%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
M+ +LF++MQ G P + +++ + + E + + M + +DAD+VL N +
Sbjct: 186 MMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCI 245
Query: 61 DLYLKCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVV 116
D + K + A + F E+ G D VT+ MI A ++++++MF +L V
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305
Query: 117 ----SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
++NT+I G G A LL G+ S + + ++GK
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLR-----KMGKVD 360
Query: 173 HGRVITLALNGDNFINSS----LVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWN 228
+ + D N S L++M C+ G+ D A L+D ++ + G + N
Sbjct: 361 EALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTA-FELRD---SMQKAGLFPNVRTVN 416
Query: 229 SMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKI 288
MV + K ++ F M +++ D T ++I G ++ +++ +
Sbjct: 417 IMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS 476
Query: 289 GHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQ-INE---PNVFLWTSMISGCALHGKGKQA 344
R ++ V +SLI + G +D I++ IN+ P++ L + + G+ ++
Sbjct: 477 DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 345 SSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCI 392
++FE + + VP+ ++ +I+ G E F MK+ C+
Sbjct: 537 RAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/412 (18%), Positives = 161/412 (39%), Gaps = 57/412 (13%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
++F EM K P++ T S+ + V+ ML + + ++ S++ +
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 64 LKCKAFEYAERLFE----LTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DV 115
E ++++ D+ N + AG+ EK MF + ++ D
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDA 552
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
S++ +I GLI+ G+ EL + M E G L R
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGC------------------------VLDTR 588
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
+ ++G +CKCG+ +KA +L+++ G +V + S++ G
Sbjct: 589 AYNIVIDG-----------FCKCGKVNKAYQLLEEMKTK----GFEPTVVTYGSVIDGLA 633
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY 295
+ ++ F + +++ +++I G ++ + + + G + Y
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGM 351
+SL+ K+ +++A V F+ + E PN + +I+G K +A ++ M
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 352 LNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK------DVYCINPGVE 397
QG+ P+ +++ +I+ + G + E F K D C N +E
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIE 805
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 2/223 (0%)
Query: 238 GKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVG 297
GK + ++ +S +E +VD+ + + C +A L+ + +H +I D
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 298 SSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIV 357
+S+I MYS GS++DA +F + E N+ W +I A +G+G+ A F +G
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 358 PNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKN 417
P+ F + AC +G + EG +F M Y I P +EH S+V + G L E
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 418 FIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEMLLQVAPS 460
F+ + +W++ ++ R+H ++ +G +M+ Q+ S
Sbjct: 340 FV--ESMEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDAS 380
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 189 SSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFR 248
+S++EMY CG + A + +P L T W ++ + NG+ ED + TF
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLET--------WCGVIRCFAKNGQGEDAIDTFS 271
Query: 249 SMVHELAIVDIRTVTTVISACA-----NAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
E D + AC N GLL F Y I ++ YV SL+ M
Sbjct: 272 RFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEY--GIIPCMEHYV--SLVKM 327
Query: 304 YSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHG 339
++ G LD+A + F + EPNV LW ++++ +HG
Sbjct: 328 LAEPGYLDEA-LRFVESMEPNVDLWETLMNLSRVHG 362
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 165/396 (41%), Gaps = 51/396 (12%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F+LF EM +G PN +T + + + ++ GV M+++ + V+ N++++
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Query: 63 YLK----CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP----SKD 114
Y K AFE + + + +V T+N ++ G K++ + + + S D
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
+VS+N +IDGL R G+ A +LL M E +TF
Sbjct: 441 IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF--------------------- 479
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
++++ +CK G+ D AS L +LR G S V +++ G
Sbjct: 480 --------------TAIINAFCKQGKADVASAFLG----LMLRKGISLDEVTGTTLIDGV 521
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDA 294
GK D L ++V + ++ ++ + ++ M I K+G
Sbjct: 522 CKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSV 581
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEG 350
++L+ +SG + ++ I + PNV+ +T +I+G G+ ++A L
Sbjct: 582 VTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641
Query: 351 MLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM 386
M + G+ PN VT+ ++ + G L+ R M
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 14/194 (7%)
Query: 246 TFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYS 305
T+R M + +V + T+++A G E + I KIG +D+++G+SL+ +
Sbjct: 182 TYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFC 241
Query: 306 KSGSLDDAWVIFRQINE-----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+ +L DA +F +++ PN ++ +I G G+ ++A L + M +G P+
Sbjct: 242 RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301
Query: 361 VTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAG--------CL 412
T+ +I A GL+++ F M C P V T ++D R G C
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGC-KPNVHTYTVLIDGLCRDGKIEEANGVCR 360
Query: 413 IETKNFIFENGISH 426
K+ IF + I++
Sbjct: 361 KMVKDRIFPSVITY 374
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 174/395 (44%), Gaps = 15/395 (3%)
Query: 3 FSLFREMQAKGACPNQYTLSSV-FKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
L EM G P+ T + V C ++ + K V+ ++R G D + +++
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR-GFAPDDITYGYLMN 330
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS-----KDVV 116
K + A+ LF + ++V +N +I ++ G ++ + + ++ + DV
Sbjct: 331 GLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
++N++I G + G ALE+L M G + + ++ ++ + +
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
L + + L+ +CK R +A I +++P R G + +NS++SG
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP----RKGCKPDVYTFNSLISGLCE 506
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
+ + L R M+ E + + T T+I+A G ++ R++ + G +D
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQI----NEPNVFLWTSMISGCALHGKGKQASSLFEGML 352
+SLI ++G +D A +F ++ + P+ +I+G G ++A + M+
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 353 NQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMK 387
+G P+ VTF +IN G +E+G T FR ++
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 147/341 (43%), Gaps = 43/341 (12%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ + +M+ KG PN Y+ + + + +LGK A+ + N + AD + N+
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTIL-----VDGFCKLGKIDEAYNVLNEMSADGLKPNT-- 459
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DVV 116
V +N +I A+ + +++++FR +P K DV
Sbjct: 460 ------------------------VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
++N++I GL + AL LL M+ G + VT+ ++ ++L +
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
+ D +SL++ C+ G DKA + + +LR G++ + N +++G
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE----KMLRDGHAPSNISCNILINGLCR 611
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
+G E+ ++ + MV + DI T ++I+ AG +E G M +Q G D
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMIS 333
++L+ K G + DA ++ + E PN W+ ++
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 141/340 (41%), Gaps = 52/340 (15%)
Query: 84 VVTWNIMIRAYLGAGDVEKSLDMFRNLPS----KDVVSWNTIIDGLIRCGYERRALELLF 139
+ T+ ++++A+ +++ +L + R++ + V + T+I L +C AL+LL
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 276
Query: 140 CMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCG 199
M G TF + ++ R++ D+ L+ CK G
Sbjct: 277 EMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIG 336
Query: 200 RTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIV-D 258
R D A + +P IV +N+++ G+V +G+ +D MV IV D
Sbjct: 337 RVDAAKDLFYRIP--------KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 259 IRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAW---- 314
+ T ++I GL+ ++ ++ G + + Y + L+ + K G +D+A+
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 315 -------------------------------VIFRQIN----EPNVFLWTSMISGCALHG 339
IFR++ +P+V+ + S+ISG
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 340 KGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
+ K A L M+++G+V N VT+ +INA G ++E
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 165/398 (41%), Gaps = 18/398 (4%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V SLF + G PN T + + K +K + +G WM + G DV +++++
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN 192
Query: 62 LYLKCKAFEYAERLFELTGE----GDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS----- 112
K + A LF+ E DV +NI+I +L D + +++++ L
Sbjct: 193 DLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY 252
Query: 113 KDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
+V + N +I GL +CG L++ M +N E T+ V+ + +
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVS 232
+ + D ++++ +C+CG+ ++ + + ++ NS IV +N ++
Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR-----IMEHKNSVNIVSYNILIK 367
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
G + NGK ++ +R M + D T I G + + ++ G +
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLF 348
D Y +S+I K L++A + ++++ E N + ++I G + +AS
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMM 386
M G P V++ +I G E S + + M
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM 525
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 158/373 (42%), Gaps = 17/373 (4%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
++ M+ + YT SS+ N+ + V + DVV N++L
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 63 YLKC-KAFEYAE--RLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DV 115
+ +C K E E R+ E ++V++NI+I+ L G ++++ ++R +P+K D
Sbjct: 335 FCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
++ I GL GY +AL ++ + +G + +E L
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
+ + ++ + ++L+ + R +AS L+++ N G +V +N ++ G
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN----GCRPTVVSYNILICGLC 510
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQM-HAYIQKIGHRIDA 294
GK+ + + M+ D++T + ++ ++ ++ H ++Q G D
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQS-GLETDV 569
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEG 350
+ + LIH G LDDA + + N+ + +++ G G +A+ ++
Sbjct: 570 MMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGY 629
Query: 351 MLNQGIVPNEVTF 363
M G+ P+ +++
Sbjct: 630 MYKMGLQPDIISY 642
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 179/439 (40%), Gaps = 56/439 (12%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V +L +Q G + YT + + C L M++ G + D+V S++
Sbjct: 90 VVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLI 149
Query: 61 DLYLKCKAFEYA----ERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS---- 112
+ + E A ++ E+ + DVV + +I + G V +L +F + +
Sbjct: 150 NGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIR 209
Query: 113 KDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
DVV + ++++GL G R A LL M + + +TF ++L
Sbjct: 210 PDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRT-GNSGGIVPWNSMV 231
+ +I +++ + F +SL+ +C G D+A + L+ T G +V + S++
Sbjct: 270 YNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY-----LMETKGCFPDVVAYTSLI 324
Query: 232 SGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR 291
+G+ K +D +K F M + + T TT+I G +++ +++ G
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQINE-------PNVFLWTSMISGCALHGKGKQA 344
+ + L+H +G + A +IF + + PN++ + ++ G +GK ++A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 345 SSLFEGML-----------------------------------NQGIVPNEVTFLGVINA 369
+FE M ++G+ PN VT+ +I+
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Query: 370 CSHVGLLEEGSTYFRMMKD 388
GL E FR MK+
Sbjct: 505 LFREGLKHEAHVLFRKMKE 523
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 125/299 (41%), Gaps = 9/299 (3%)
Query: 134 ALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVE 193
AL+L MVE+ S + F ++ L + + ++ D + + L+
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115
Query: 194 MYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHE 253
+C+ + AS L +++ G IV + S+++G+ + E+ + MV
Sbjct: 116 CFCQSSQPYLASSFLG----KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 254 LAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDA 313
D+ TT+I + G + + + ++ G R D + +SL++ SG DA
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 314 WVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINA 369
+ R + + P+V + ++I GK A L+ M+ I PN T+ +IN
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 370 CSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLT 428
G ++E F +M+ C P V TS+++ + + + + +E LT
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 151/366 (41%), Gaps = 48/366 (13%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
SLF +M+ G P+ +S+ + + M + + DV+ N+++D
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 63 YLKCKAFEYAERLF----ELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----D 114
++K F AE L+ ++ ++ T+ +I + G V+++ MF + +K D
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
VV++ ++I+G +C A+++ + M + G + +T+ + +++
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP----WNSM 230
+++ + + + L+ C G+ KA +I +D ++ G+ P +N +
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED-----MQKREMDGVAPNIWTYNVL 431
Query: 231 VSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGH 290
+ G +NGK E L F M + I T T +I AG K+ +
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAG-------------KVKN 478
Query: 291 RIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEG 350
++ + SL V +PNV +T+MISG G +A LF
Sbjct: 479 AVNLFC------------SLPSKGV------KPNVVTYTTMISGLFREGLKHEAHVLFRK 520
Query: 351 MLNQGI 356
M G+
Sbjct: 521 MKEDGV 526
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 163/372 (43%), Gaps = 17/372 (4%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDAD----VVLVNSIL 60
L +M+++G PN + ++V +KN+ L + V + +L G+ + +L++
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCF 524
Query: 61 DLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK-----DV 115
+ + A E + E + V + +I G K+ ++ N+ +
Sbjct: 525 RNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
+S+N+IIDG + G A+ M NG + +T+ ++ ++
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
+ + D +L++ +CK + AS + + LL G + +NS++SG+
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSE----LLEEGLNPSQPIYNSLISGFR 700
Query: 236 WNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAY 295
G L ++ M+ + D+ T TT+I G L +++ +Q +G D
Sbjct: 701 NLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEI 760
Query: 296 VGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGM 351
+ + +++ SK G +F ++ + PNV ++ ++I+G G +A L + M
Sbjct: 761 IYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Query: 352 LNQGIVPNEVTF 363
L++GI+P+ TF
Sbjct: 821 LDKGILPDGATF 832
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 90/461 (19%), Positives = 187/461 (40%), Gaps = 58/461 (12%)
Query: 5 LFREMQAKGACPNQYTLSSVF----KCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
LF +M+ +G PN T S + K EK L+ K + G+ V V++I+
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL----GLTPSVFHVHTII 416
Query: 61 DLYLKCKAFEYAERLFEL---TGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK---- 113
+LK + E A +LF+ TG +V N ++ G +++ ++ + S+
Sbjct: 417 QGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 114 DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
+VVS+N ++ G R A + ++E G + + T+ + ++
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSG 233
+ + + + + +++ CK G+T KA +L ++ + + +NS++ G
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM---IEEKRLCVSCMSYNSIIDG 593
Query: 234 YVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRID 293
+ G+ + + + M ++ T T++++ ++ +M ++ G ++D
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653
Query: 294 AYVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISG--------------- 334
+LI + K +++ A +F ++ E P+ ++ S+ISG
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Query: 335 --------CAL------------HGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVG 374
C L G AS L+ M G+VP+E+ + ++N S G
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Query: 375 LLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIET 415
+ F MK + P V +++ + R G L E
Sbjct: 774 QFVKVVKMFEEMKK-NNVTPNVLIYNAVIAGHYREGNLDEA 813
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 185/444 (41%), Gaps = 54/444 (12%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+F ++ G P+ + V E +Q+ V+ M R+G + +V N +L
Sbjct: 133 MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 192
Query: 65 KCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVS-WN 119
K + A++L E++ +G D V++ +I + G V++ ++ + VVS +N
Sbjct: 193 KNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF--EPVVSVYN 250
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
+I+GL + + A EL+ MVE G + +++
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISY-------------------------- 284
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
S+L+ + C G+ + A L +L+ G I +S+V G G
Sbjct: 285 ---------STLINVLCNSGQIELAFSFLTQ----MLKRGCHPNIYTLSSLVKGCFLRGT 331
Query: 240 YEDCLKTFRSMVHELAI-VDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
D L + M+ + ++ T++ + G + + +++++IG +
Sbjct: 332 TFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYG 391
Query: 299 SLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQ 354
SLI+ ++K GSLD A I+ ++ PNV ++T+M+ H K K+A SL E M +
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE 451
Query: 355 GIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIE 414
P+ TF I G L+ FR M+ + P + ++D +A + E
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511
Query: 415 TKNF---IFENGISHLTSVWKSFL 435
IF G+ +S + + L
Sbjct: 512 AYGLTREIFMRGVEWSSSTYNTLL 535
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 120/275 (43%), Gaps = 15/275 (5%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAW--MLRNGVDADVVLVNSILD 61
S+F M+ G PN T S+ K L V+ W ML +G +VV+ ++++
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLIN--GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 62 LYLKCKAFEYAERLFELTGEGD----VVTWNIMIRAYLGAGDVEKSLDMFRNLPSK---- 113
+ F+ AE L E+ + + V T+N I+ AG ++ + +FR + +
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 114 -DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
++V++N ++DGL + A L + G E+S T+ + QL
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVS 232
G+++ + D + ++ YCK G+ ++A+ +L V R ++ + +++
Sbjct: 551 VGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCG--RRKWRPDVISYTNVIW 608
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVIS 267
G + ED + M+ + I T + +I+
Sbjct: 609 GLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 166/375 (44%), Gaps = 24/375 (6%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLY 63
+L M +G PN T V ++ L + M ++A+VV+ ++++D
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 64 LKCKAFEYAERLF-ELTGEG---DVVTWNIMIRA---YLGAGDVEKSL-DMFRNLPSKDV 115
K + + A LF E+ +G +V+T++ +I Y D + L DM + +V
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
V++N +ID ++ G A +L M++ + T+ ++ K +
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM--- 387
Query: 176 VITLALNGDNFIN----SSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMV 231
L ++ D F N ++L+ +CK R D+ + +++ + G G V + +++
Sbjct: 388 -FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS----QRGLVGNTVTYTTLI 442
Query: 232 SGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR 291
G+ ++ F+ MV + +I T T++ G LE + Y+Q+
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSL 347
Y + +I K+G ++D W +F ++ +P+V ++ +MISG G ++A +L
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 348 FEGMLNQGIVPNEVT 362
F M G +P+ T
Sbjct: 563 FRKMREDGPLPDSGT 577
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 98/475 (20%), Positives = 189/475 (39%), Gaps = 96/475 (20%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V SL +MQ G N YT + + C + L + M++ G + +V ++S+L
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 61 D------------------------------------LYLKCKAFE---YAERLFELTGE 81
+ L+L KA E +R+ + +
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 82 GDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS----KDVVSWNTIIDGLIR---------- 127
++VT+ +++ GD++ + ++ + + +VV ++T+ID L +
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 128 -----------------------CGYER--RALELLFCMVENGTEFSEVTFXXXXXXXXX 162
C YER A LL M+E + VTF
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 163 XXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKAS-----VILKDVPLNLLR 217
+ ++L+ +I +++ D F SSL+ +C R D+A +I KD N
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN--- 399
Query: 218 TGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEF 277
+V +N++++G+ + ++ ++ FR M + + T TT+I A +
Sbjct: 400 ------VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 278 GRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIF----RQINEPNVFLWTSMIS 333
+ + + G + ++L+ K+G L+ A V+F R EP ++ + MI
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 334 GCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
G GK + LF + +G+ P+ + + +I+ GL EE FR M++
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/433 (19%), Positives = 194/433 (44%), Gaps = 18/433 (4%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+ +L +M G P+ TLSS+ K + + M+ G D + +++
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 61 D-LYLKCKAFE---YAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK--- 113
L+L KA E +R+ + + ++VT+ +++ GD++ + ++ + +
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 114 -DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
+VV ++T+ID L + +E AL L M G + +T+ +L
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVS 232
+I +N + ++L++ + K G+ +A + + +++ I ++S+++
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE----MIKRSIDPDIFTYSSLIN 373
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
G+ + + ++ F M+ + ++ T T+I+ A ++ G ++ + + G
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLF 348
+ ++LIH + ++ D+A ++F+Q+ PN+ + +++ G +GK ++A +F
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGR 408
E + + P T+ +I G +E+G F + + + P V +M+ + R
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPDVIIYNTMISGFCR 552
Query: 409 AGCLIETKNFIFE 421
G L E + +F
Sbjct: 553 KG-LKEEADALFR 564
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 143/329 (43%), Gaps = 16/329 (4%)
Query: 44 MLRNGVDADVVLVNSILDLYLKCKAFEYAERLF---ELTGEG-DVVTWNIMIRAYLGAGD 99
M+ G +VV+ N+I+D K K + A L E G G DVVT+N +I +G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 100 VEKSLDMFRNLPSK----DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXX 155
+ M + + DV ++N +ID ++ G A E M+ + VT+
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 156 XXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNL 215
++ +++ G +++ D S L+ YCK + + + ++
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS--- 353
Query: 216 LRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLL 275
+ G V + ++ GY GK + FR MV +I T ++ + G +
Sbjct: 354 -QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 276 EFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSM 331
E + A +QK G D + +I K+G + DAW I+ +N P+++ +T+M
Sbjct: 413 EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTM 472
Query: 332 ISGCALHGKGKQASSLFEGMLNQGIVPNE 360
+ G G ++A +LF M GI+PNE
Sbjct: 473 MLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 165/400 (41%), Gaps = 16/400 (4%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
+V L+ +MQ G N T + + C L L M++ G + +V S+L
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 61 DLYLKCKAFEYAERLF-ELTGEG---DVVTWNIMIRAYLGAGDVEKSLDMFRNLPS---- 112
+ + + A +F ++ G G +VV +N +I + V+ +LD+ +
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 113 KDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
DVV++N++I GL G A ++ CM + TF V ++
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVS 232
+ +I +L+ D S L+ C R D+A + ++ G +V ++ +++
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG----FMVSKGCFPDVVTYSILIN 334
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRI 292
GY + K E +K F M + + T T +I AG L ++ + G
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 293 DAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLF 348
+ + L+H +G ++ A VI + + ++ + +I G G+ A ++
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Query: 349 EGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
+ QG++P+ T+ ++ GL E FR MK+
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 121/288 (42%), Gaps = 11/288 (3%)
Query: 114 DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
++ + N +++ RC AL L M++ G E S VTF V +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSG 233
+++ + + I +++++ CK + D A +L + + G +V +NS++SG
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLN----RMEKDGIGPDVVTYNSLISG 230
Query: 234 YVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRID 293
+G++ D + M D+ T +I AC G + + + + + D
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 294 AYVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFE 349
S LI+ LD+A +F + P+V ++ +I+G K + LF
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 350 GMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYC-INPGV 396
M +G+V N VT+ +I G L FR M V+C ++P +
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM--VFCGVHPNI 396
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 161/377 (42%), Gaps = 16/377 (4%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
L +E KG P YT +++ +++ +GV M ++GV + V +++L +
Sbjct: 246 LIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSV 305
Query: 65 KCKAFEYAERLF----ELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV----V 116
K AE+LF E E DV + +I G+++++ +F L K +
Sbjct: 306 KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
++ +IDG+ + G A L+ M G ++V F V+ ++ +
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVM 425
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
D F +++ + + R D+A L ++ G V + +++ Y
Sbjct: 426 EQKGFQADVFTCNTIASCFNRLKRYDEAKQWL----FRMMEGGVKLSTVSYTNLIDVYCK 481
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
G E+ + F M + + T +I A G ++ R++ A ++ G D+Y
Sbjct: 482 EGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYT 541
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGML 352
+SLIH + ++D+A +F ++ + N +T MISG + GK +A L++ M
Sbjct: 542 YTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
Query: 353 NQGIVPNEVTFLGVINA 369
+G + + +I +
Sbjct: 602 RKGYTIDNKVYTALIGS 618
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 158/374 (42%), Gaps = 16/374 (4%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V L +EM+ G PN YT + + + + M G DVV ++D
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 62 LYLKCKAFEYAERLFELTGEG----DVVTWNIMIRAYLGAGDVEKSL----DMFRNLPSK 113
+ + A+ +FE G D VT+ ++ + D++ +M ++
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 114 DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
DVV++ ++D L + G A + L M + G + T+ ++ +L
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSG 233
G + +L + + ++ Y K G + A + + G + IV N+ +
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE----KMKTKGIAPNIVACNASLYS 477
Query: 234 YVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRID 293
G+ + + F + + D T ++ + G ++ ++ + + + G D
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 294 AYVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFE 349
V +SLI+ K+ +D+AW +F ++ E P V + ++++G +GK ++A LFE
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 350 GMLNQGIVPNEVTF 363
GM+ +G PN +TF
Sbjct: 598 GMVQKGCPPNTITF 611
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 145/345 (42%), Gaps = 45/345 (13%)
Query: 34 LQLGKGVHAWMLRNGVDADVVLVNSILDLYLKC----KAFEYAERLFELTGEGDVVTWNI 89
+++ + V + G DV N +LD Y K + FE + + E + +T NI
Sbjct: 801 IEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNI 860
Query: 90 MIRAYLGAGDVEKSLDMFRNLPS-----KDVVSWNTIIDGLIRCGYERRALELLFCMVEN 144
+I + AG+V+ +LD++ +L S ++ +IDGL + G A +L M++
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 145 GTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKA 204
G + + + L R++ + D S LV+ C GR D+
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 205 SVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIV-DIRTVT 263
K+ L +G + +V +N +++G + + E+ L F M I D+ T
Sbjct: 981 LHYFKE----LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 264 TVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEP 323
++I AG++E +++ IQ+ G EP
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGL-------------------------------EP 1065
Query: 324 NVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
NVF + ++I G +L GK + A ++++ M+ G PN T+ + N
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 93/449 (20%), Positives = 175/449 (38%), Gaps = 65/449 (14%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
+F +EM+ K P T +++ +Q + M++ G + + N++ D
Sbjct: 560 MFMRMKEMKLK---PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Query: 62 LYLKCKAFEYAER-LFELTGEG---DVVTWNIMIRAYLGAGDVEKSLDMF---RNLPSKD 114
K A + LF++ G DV T+N +I + G V++++ F + L D
Sbjct: 617 CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPD 676
Query: 115 VVSWNTIIDGLIRCGYERRALELLF-----CMVENGTEFSEVTFXXXXXXXXXXXXVELG 169
V+ T++ G+++ A +++ C + F E V
Sbjct: 677 FVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFS 736
Query: 170 KQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASV----------------------- 206
++L I +GD+ + ++ CK A
Sbjct: 737 ERLVANGI--CRDGDSIL-VPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIG 793
Query: 207 ---------ILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIV 257
I +DV L + TG + +N ++ Y +GK ++ + ++ M
Sbjct: 794 GLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEA 853
Query: 258 DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR---IDAYVGSSLIHMYSKSGSLDDAW 314
+ T VIS AG ++ + Y + R A LI SKSG L +A
Sbjct: 854 NTITHNIVISGLVKAGNVD--DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 315 VIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINAC 370
+F + + PN ++ +I+G G+ A +LF+ M+ +G+ P+ T+ +++
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Query: 371 SHVGLLEEGSTYFRMMK------DVYCIN 393
VG ++EG YF+ +K DV C N
Sbjct: 972 CMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/339 (18%), Positives = 138/339 (40%), Gaps = 17/339 (5%)
Query: 8 EMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCK 67
EM+ G P+ T + + N M G+ ++ N+++ L+
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 68 AFEYAERLF----ELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DVVSWN 119
+ A LF L + T+ + I Y +GD +L+ F + +K ++V+ N
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
+ L + G +R A ++ + + + G VT+ ++ +L ++
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKA-SVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNG 238
D + +SL+ K R D+A + ++ + L T +V +N++++G NG
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT-----VVTYNTLLAGLGKNG 587
Query: 239 KYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGS 298
K ++ ++ F MV + + T T+ + +M + +G D + +
Sbjct: 588 KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYN 647
Query: 299 SLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCAL 337
++I K+G + +A F Q+ + ++ ++ C L
Sbjct: 648 TIIFGLVKNGQVKEAMCFFHQMKK---LVYPDFVTLCTL 683
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 89/462 (19%), Positives = 172/462 (37%), Gaps = 58/462 (12%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
LF M KG PN T +++F C + L + M+ G DV N+I+ +
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 654
Query: 65 KCKAFEYAERLFELTGE---GDVVTWNIMIRAYLGAGDVEKSLDMFRNL-------PSKD 114
K + A F + D VT ++ + A +E + + N P+
Sbjct: 655 KNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPAN- 713
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENG--------------------------TEF 148
+ W +I ++ A+ +V NG T F
Sbjct: 714 -LFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLF 772
Query: 149 SEVTFXXXXXXXXXXXXVELGKQLHGRVITLALN-----------GDNFINSSLVEMYCK 197
+ T + +G L +I +A + D + L++ Y K
Sbjct: 773 EKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGK 832
Query: 198 CGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIV 257
G+ D+ + K++ + + N ++SG V G +D L + ++ +
Sbjct: 833 SGKIDELFELYKEMSTHECEANT----ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS 888
Query: 258 DIR-TVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVI 316
T +I + +G L +Q+ + G R + + + LI+ + K+G D A +
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 317 FRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSH 372
F+++ + P++ ++ ++ + G+ + F+ + G+ P+ V + +IN
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 373 VGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIE 414
LEE F MK I P + S++ G AG + E
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 12/210 (5%)
Query: 201 TDKASVILKDVP--LNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVD 258
TD + K V LNL+ T + N M+ +GK E+ F M + D
Sbjct: 98 TDSSFSYFKSVAGNLNLVHTTET-----CNYMLEALRVDGKLEEMAYVFDLMQKRIIKRD 152
Query: 259 IRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFR 318
T T+ + + G L+ +++ G ++AY + LIH+ KS +A ++R
Sbjct: 153 TNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYR 212
Query: 319 QI----NEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVG 374
++ P++ ++S++ G L + M G+ PN TF I G
Sbjct: 213 RMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 272
Query: 375 LLEEGSTYFRMMKDVYCINPGVEHCTSMVD 404
+ E + M D C P V T ++D
Sbjct: 273 KINEAYEILKRMDDEGC-GPDVVTYTVLID 301
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 172/420 (40%), Gaps = 55/420 (13%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRN-GVDADVVLVNSILDL 62
+F M++ G PN L + + + L A +L++ V+ ++VNS+L+
Sbjct: 124 QMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT---ALLLQSFEVEGCCMVVNSLLNT 180
Query: 63 YLKCKAFEYAERLFE----LTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP----SKD 114
+K E A +LF+ D T+NI+IR G G EK+L++ + D
Sbjct: 181 LVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPD 240
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
+V++NT+I G + +A E+ V+ G
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMF-------------------------KDVKSGSVCSP 275
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
V+T +S++ YCK G+ +AS +L D +LR G V +N +V GY
Sbjct: 276 DVVTY---------TSMISGYCKAGKMREASSLLDD----MLRLGIYPTNVTFNVLVDGY 322
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDA 294
G+ + M+ D+ T T++I G + G ++ + G +A
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEG 350
+ S LI+ L A + Q+ P F++ +I G GK +A+ + E
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 351 MLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAG 410
M + P+++TF +I G + E + F M + C +P +S++ +AG
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGC-SPDKITVSSLLSCLLKAG 501
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 139/324 (42%), Gaps = 55/324 (16%)
Query: 72 AERLFELTG-------EGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS-----KDVVSWN 119
AE+ EL G E D+VT+N +I+ + + ++ K+ +MF+++ S DVV++
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
++I G + G R A LL M+ G + VTF + +++ G++I+
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
D +SL++ YC+ G+ + L N+ G+ P
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQG--------FRLWEEMNARGMFP------------- 380
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
+ T + +I+A N L R++ + ++ +
Sbjct: 381 ------------------NAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 300 LIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG 355
+I + K+G +++A VI ++ +P+ +T +I G + G+ +A S+F M+ G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 356 IVPNEVTFLGVINACSHVGLLEEG 379
P+++T +++ G+ +E
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEA 506
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 127/310 (40%), Gaps = 12/310 (3%)
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
F+L T+N++ R+ AG + + MF + S V N ++ L+ E+ L
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 136 ELLFCMVENGTEFSE--VTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVE 193
++ E + VE +L + D + L+
Sbjct: 155 HFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 194 MYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVH- 252
C G+ +KA +L + G IV +N+++ G+ + + + F+ +
Sbjct: 215 GLCGVGKAEKALELLGVMS----GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG 270
Query: 253 ELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDD 312
+ D+ T T++IS AG + + + ++G + L+ Y+K+G +
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 313 AWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
A I ++ P+V +TS+I G G+ Q L+E M +G+ PN T+ +IN
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 369 A-CSHVGLLE 377
A C+ LL+
Sbjct: 391 ALCNENRLLK 400
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 172/420 (40%), Gaps = 55/420 (13%)
Query: 4 SLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRN-GVDADVVLVNSILDL 62
+F M++ G PN L + + + L A +L++ V+ ++VNS+L+
Sbjct: 124 QMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT---ALLLQSFEVEGCCMVVNSLLNT 180
Query: 63 YLKCKAFEYAERLFE----LTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP----SKD 114
+K E A +LF+ D T+NI+IR G G EK+L++ + D
Sbjct: 181 LVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPD 240
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
+V++NT+I G + +A E+ V+ G
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMF-------------------------KDVKSGSVCSP 275
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
V+T +S++ YCK G+ +AS +L D +LR G V +N +V GY
Sbjct: 276 DVVTY---------TSMISGYCKAGKMREASSLLDD----MLRLGIYPTNVTFNVLVDGY 322
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDA 294
G+ + M+ D+ T T++I G + G ++ + G +A
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 295 YVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEG 350
+ S LI+ L A + Q+ P F++ +I G GK +A+ + E
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 351 MLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAG 410
M + P+++TF +I G + E + F M + C +P +S++ +AG
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGC-SPDKITVSSLLSCLLKAG 501
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 139/324 (42%), Gaps = 55/324 (16%)
Query: 72 AERLFELTG-------EGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPS-----KDVVSWN 119
AE+ EL G E D+VT+N +I+ + + ++ K+ +MF+++ S DVV++
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 120 TIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITL 179
++I G + G R A LL M+ G + VTF + +++ G++I+
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 180 ALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGK 239
D +SL++ YC+ G+ + L N+ G+ P
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQG--------FRLWEEMNARGMFP------------- 380
Query: 240 YEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSS 299
+ T + +I+A N L R++ + ++ +
Sbjct: 381 ------------------NAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 300 LIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQG 355
+I + K+G +++A VI ++ +P+ +T +I G + G+ +A S+F M+ G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 356 IVPNEVTFLGVINACSHVGLLEEG 379
P+++T +++ G+ +E
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEA 506
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 127/310 (40%), Gaps = 12/310 (3%)
Query: 76 FELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTIIDGLIRCGYERRAL 135
F+L T+N++ R+ AG + + MF + S V N ++ L+ E+ L
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 136 ELLFCMVENGTEFSE--VTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVE 193
++ E + VE +L + D + L+
Sbjct: 155 HFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 194 MYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVH- 252
C G+ +KA +L + G IV +N+++ G+ + + + F+ +
Sbjct: 215 GLCGVGKAEKALELLGVMS----GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG 270
Query: 253 ELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDD 312
+ D+ T T++IS AG + + + ++G + L+ Y+K+G +
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 313 AWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVIN 368
A I ++ P+V +TS+I G G+ Q L+E M +G+ PN T+ +IN
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 369 A-CSHVGLLE 377
A C+ LL+
Sbjct: 391 ALCNENRLLK 400
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 168/409 (41%), Gaps = 51/409 (12%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V+ L M+ KG PN Y S+ L + + M+R G+ D V+ +++D
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 62 LYLKCKAFEYAERLF------ELTG---------------------------------EG 82
+ K A + F ++T E
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 83 DVVTWNIMIRAYLGAGDVEKSLDMFRNLP----SKDVVSWNTIIDGLIRCGYERRALELL 138
D VT+ +I Y AG ++ + + ++ S +VV++ T+IDGL + G A ELL
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 139 FCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKC 198
M + G + + T+ +E +L G LN D ++L++ YCK
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 199 GRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVD 258
G DKA ILK+ +L G IV +N +++G+ +G ED K M+ + +
Sbjct: 540 GEMDKAQEILKE----MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 259 IRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFR 318
T +++ L+ ++ + G D +L+ + K+ ++ +AW +F+
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 319 QIN----EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
++ +V ++ +I G K +A +F+ M +G+ ++ F
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 197/509 (38%), Gaps = 100/509 (19%)
Query: 9 MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAW-----MLRNGVDADVVLVNSILDLY 63
M+ KG P+ + S+V + G+ W M R G+ + + SI+ L
Sbjct: 272 MELKGYTPDVISYSTV-----VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
Query: 64 LK-CKAFEYAERLFELTGEG---DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKD----V 115
+ CK E E E+ +G D V + +I + GD+ + F + S+D V
Sbjct: 327 CRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV 386
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
+++ II G FC + + VE GK H
Sbjct: 387 LTYTAIISG--------------FCQIGD--------------------MVEAGKLFH-E 411
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
+ L D+ + L+ YCK G A + ++++ G S +V + +++ G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN----HMIQAGCSPNVVTYTTLIDGLC 467
Query: 236 WNGKYEDCLKTFRSMVHELAIV----DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR 291
G L + ++HE+ + +I T ++++ +G +E ++ + G
Sbjct: 468 KEGD----LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSL 347
D ++L+ Y KSG +D A I +++ +P + + +++G LHG + L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 348 FEGMLNQGIVPNEVTFLGVI-----------------NACSHVGLLEEGSTYFRMMKDVY 390
ML +GI PN TF ++ + CS G+ +G TY ++K
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLVKG-- 640
Query: 391 CINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWV 450
HC + ++ E K F +S + + K FL + K +E +
Sbjct: 641 -------HCKAR-NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL---KRKKFLEAREVF 689
Query: 451 SEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
+M + +D E + S+ R D
Sbjct: 690 DQMRREGLAADKEIFDFFSDTKYKGKRPD 718
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 9/235 (3%)
Query: 191 LVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSM 250
++ C+ GR +A +L + L G + ++ ++++V+GY G+ + K M
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELK----GYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 251 VHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSL 310
+ + ++I L + + + + G D V ++LI + K G +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 311 DDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGV 366
A F +++ P+V +T++ISG G +A LF M +G+ P+ VTF +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 367 INACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
IN G +++ M C +P V T+++D + G L + E
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGC-SPNVVTYTTLIDGLCKEGDLDSANELLHE 481
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 168/409 (41%), Gaps = 51/409 (12%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
V+ L M+ KG PN Y S+ L + + M+R G+ D V+ +++D
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 62 LYLKCKAFEYAERLF------ELTG---------------------------------EG 82
+ K A + F ++T E
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 83 DVVTWNIMIRAYLGAGDVEKSLDMFRNLP----SKDVVSWNTIIDGLIRCGYERRALELL 138
D VT+ +I Y AG ++ + + ++ S +VV++ T+IDGL + G A ELL
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 139 FCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKC 198
M + G + + T+ +E +L G LN D ++L++ YCK
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 199 GRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVD 258
G DKA ILK+ +L G IV +N +++G+ +G ED K M+ + +
Sbjct: 540 GEMDKAQEILKE----MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 259 IRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFR 318
T +++ L+ ++ + G D +L+ + K+ ++ +AW +F+
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 319 QIN----EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTF 363
++ +V ++ +I G K +A +F+ M +G+ ++ F
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 197/509 (38%), Gaps = 100/509 (19%)
Query: 9 MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAW-----MLRNGVDADVVLVNSILDLY 63
M+ KG P+ + S+V + G+ W M R G+ + + SI+ L
Sbjct: 272 MELKGYTPDVISYSTV-----VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
Query: 64 LK-CKAFEYAERLFELTGEG---DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKD----V 115
+ CK E E E+ +G D V + +I + GD+ + F + S+D V
Sbjct: 327 CRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV 386
Query: 116 VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGR 175
+++ II G FC + + VE GK H
Sbjct: 387 LTYTAIISG--------------FCQIGD--------------------MVEAGKLFH-E 411
Query: 176 VITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYV 235
+ L D+ + L+ YCK G A + ++++ G S +V + +++ G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN----HMIQAGCSPNVVTYTTLIDGLC 467
Query: 236 WNGKYEDCLKTFRSMVHELAIV----DIRTVTTVISACANAGLLEFGRQMHAYIQKIGHR 291
G L + ++HE+ + +I T ++++ +G +E ++ + G
Sbjct: 468 KEGD----LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 292 IDAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSL 347
D ++L+ Y KSG +D A I +++ +P + + +++G LHG + L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 348 FEGMLNQGIVPNEVTFLGVI-----------------NACSHVGLLEEGSTYFRMMKDVY 390
ML +GI PN TF ++ + CS G+ +G TY ++K
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLVKG-- 640
Query: 391 CINPGVEHCTSMVDLYGRAGCLIETKNFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWV 450
HC + ++ E K F +S + + K FL + K +E +
Sbjct: 641 -------HCKAR-NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL---KRKKFLEAREVF 689
Query: 451 SEMLLQVAPSDPEAYILLSNMCTSNHRWD 479
+M + +D E + S+ R D
Sbjct: 690 DQMRREGLAADKEIFDFFSDTKYKGKRPD 718
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 9/235 (3%)
Query: 191 LVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSM 250
++ C+ GR +A +L + L G + ++ ++++V+GY G+ + K M
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELK----GYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 251 VHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSL 310
+ + ++I L + + + + G D V ++LI + K G +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 311 DDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGV 366
A F +++ P+V +T++ISG G +A LF M +G+ P+ VTF +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 367 INACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETKNFIFE 421
IN G +++ M C +P V T+++D + G L + E
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGC-SPNVVTYTTLIDGLCKEGDLDSANELLHE 481
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 162/395 (41%), Gaps = 77/395 (19%)
Query: 2 VFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD 61
LF EM+ G P YT + + K + G + MLR+G+ DVV +N++++
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 62 LYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDVVSWNTI 121
+ K R+ ELT +V + M+R P+ VVS+NT+
Sbjct: 347 ILGKVG------RVEELT-------------------NVFSEMGMWRCTPT--VVSYNTV 379
Query: 122 IDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLAL 181
I L E+ SEV+ ++ ++
Sbjct: 380 IKALF----------------ESKAHVSEVS------------------SWFDKMKADSV 405
Query: 182 NGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP----WNSMVSGYVWN 237
+ F S L++ YCK R +KA ++L+++ + G P + S+++
Sbjct: 406 SPSEFTYSILIDGYCKTNRVEKALLLLEEM--------DEKGFPPCPAAYCSLINALGKA 457
Query: 238 GKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVG 297
+YE + F+ + V R +I G L + ++ G D Y
Sbjct: 458 KRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAY 517
Query: 298 SSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGMLN 353
++L+ K+G +++A + R++ E ++ +++G A G ++A +FE + +
Sbjct: 518 NALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKH 577
Query: 354 QGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKD 388
GI P+ VT+ ++ +H G+ EE + R MKD
Sbjct: 578 SGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD 612
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 149/337 (44%), Gaps = 15/337 (4%)
Query: 44 MLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELT---GEGDVVTWNIMIRAYLGAG-- 98
M+R G + DV+L ++ + + A R+ E+ G+ DV +N +I +
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRI 174
Query: 99 -DVEKSLDMFRNLP-SKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXX 156
D + LD R+ S D V++N +I L G AL++L ++ + + + +T+
Sbjct: 175 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 157 XXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLL 216
V+ +L +++ L D F ++++ CK G D+A +++++ L
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK-- 292
Query: 217 RTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLE 276
G ++ +N ++ + GK+E+ K M E ++ T + +I+ G +E
Sbjct: 293 --GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 277 FGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMI 332
+ +++ G DAY LI + + G LD A + P++ + +++
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 333 SGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINA 369
+ +GK QA +F + G PN ++ + +A
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 150/351 (42%), Gaps = 34/351 (9%)
Query: 40 VHAWMLRNGVDADVVLVNSILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGD 99
+ A ML GVD + L++ +L LK D+ T+N +IR G
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLK----------------PDMFTYNTIIRGMCKEGM 278
Query: 100 VEKSLDMFRNLPSK----DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXX 155
V+++ +M RNL K DV+S+N ++ L+ G +L+ M + + VT+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 156 XXXXXXXXXXVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNL 215
+E L + L D + L+ +C+ GR D A L+ +
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE----TM 394
Query: 216 LRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLL 275
+ G IV +N++++ NGK + L+ F + + + T+ SA ++G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG-- 452
Query: 276 EFGRQMHAYIQKIGHRIDA--YVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWT 329
+ R +H ++ + + ID +S+I + G +D+A+ + + P+V +
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 330 SMISG-CALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG 379
++ G C H + + A ++ E M+ G PNE T+ +I G E
Sbjct: 513 IVLLGFCKAH-RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 16/222 (7%)
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGN-SGGIVPWNSMVSGYVWNGKYED 242
D F ++L+ +CK R D A+ +L + +R+ + S V +N M+ GK +
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVL-----DRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211
Query: 243 CLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIH 302
LK ++ + + T T +I A G ++ ++ + G + D + +++I
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 303 MYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVP 358
K G +D A+ + R + EP+V + ++ GK ++ L M ++ P
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331
Query: 359 NEVTFLGVINACSHVGLLEEGSTYFRMMK------DVYCINP 394
N VT+ +I G +EE ++MK D Y +P
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%)
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
G + + ++ + ++ +D+ + + C LE R +H I + D
Sbjct: 97 QGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGA 156
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
+++I MYS S+DDA +F ++ E N M+ +G G++A LF +G
Sbjct: 157 RNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGN 216
Query: 357 VPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCLIETK 416
PN F V + C+ G ++EGS F+ M Y I P +EH S+ + +G L E
Sbjct: 217 KPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEAL 276
Query: 417 NFIFENGISHLTSVWKSFLSSCRLHKNIEMGKWVSEML 454
NF+ + VW++ ++ R+H ++E+G +E++
Sbjct: 277 NFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELV 314
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 169/388 (43%), Gaps = 36/388 (9%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDL 62
F LF+ M+ +G P+ S++ L +G + + L GV DVV+ +S +D+
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365
Query: 63 YLKCKAFEYAERLFE-LTGEG---DVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----D 114
Y+K A +++ + +G +VVT+ I+I+ G + ++ M+ + +
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
+V+++++IDG +CG R L M++ G V + + G LH
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS-----KQGLMLHA 480
Query: 175 RVITLALNGDNF-----INSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP--- 226
++ + G + + +SL++ +C+ R D+A L + R GI P
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA--------LKVFRLMGIYGIKPDVA 532
Query: 227 -WNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYI 285
+ +++ + G+ E+ L F M D T+I A G Q+ +
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 286 QKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQI----NEPNVFLWTSMISG-CALHGK 340
Q+ D V + +IH+ K ++DA F + EP++ + +MI G C+L +
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR-R 651
Query: 341 GKQASSLFEGMLNQGIVPNEVTFLGVIN 368
+A +FE + PN VT +I+
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIH 679
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 163/378 (43%), Gaps = 22/378 (5%)
Query: 9 MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLKCKA 68
++ G + + L ++F C E L H ++ G +V N +L L
Sbjct: 212 IEPSGVSAHGFVLDALF--CKGEVTKALD--FHRLVMERGFRVGIVSCNKVLK-GLSVDQ 266
Query: 69 FEYAERLFELTGE----GDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DVVSWNT 120
E A RL L + +VVT+ +I + G+++++ D+F+ + + D+++++T
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 121 IIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLA 180
+IDG + G +L + G + V F + ++ R++
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 181 LNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKY 240
++ + + L++ C+ GR +A + + L+ G IV ++S++ G+ G
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQI----LKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 241 EDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSL 300
+ M+ D+ ++ + GL+ + + R++ V +SL
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 301 IHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGI 356
I + + D+A +FR + +P+V +T+++ + G+ ++A LF M G+
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 357 VPNEVTFLGVINA-CSHV 373
P+ + + +I+A C H+
Sbjct: 563 EPDALAYCTLIDAFCKHM 580
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 175/423 (41%), Gaps = 17/423 (4%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+++ M +G PN T + + K + + G++ +L+ G++ +V +S++D +
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 65 KC----KAFEYAERLFELTGEGDVVTWNIMIRAYLGAG----DVEKSLDMFRNLPSKDVV 116
KC F E + ++ DVV + +++ G + S+ M +VV
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 117 SWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRV 176
+N++IDG R AL++ M G + TF +E L R+
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 177 ITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVW 236
+ L D +L++ +CK K ++ L+ L + R S I N ++
Sbjct: 558 FKMGLEPDALAYCTLIDAFCK---HMKPTIGLQLFDL-MQRNKISADIAVCNVVIHLLFK 613
Query: 237 NGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYV 296
+ ED K F +++ DI T T+I + L+ ++ ++ +
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 297 GSSLIHMYSKSGSLDDAWVIFRQINE----PNVFLWTSMISGCALHGKGKQASSLFEGML 352
+ LIH+ K+ +D A +F + E PN + ++ + + + LFE M
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 353 NQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINPGVEHCTSMVDLYGRAGCL 412
+GI P+ V++ +I+ G ++E + F D + P V ++ Y + G L
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL-PDVVAYAILIRGYCKVGRL 792
Query: 413 IET 415
+E
Sbjct: 793 VEA 795
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 9/282 (3%)
Query: 111 PSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGK 170
P+ +VV++ T+I+G + G RA +L M + G E + + + +G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 171 QLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSM 230
+L + + + D + SS +++Y K G ASV+ K +L G S +V + +
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK----RMLCQGISPNVVTYTIL 397
Query: 231 VSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGH 290
+ G +G+ + + ++ I T +++I G L G ++ + K+G+
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 291 RIDAYVGSSLIHMYSKSGSLDDAW----VIFRQINEPNVFLWTSMISGCALHGKGKQASS 346
D + L+ SK G + A + Q NV ++ S+I G + +A
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 347 LFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG-STYFRMMK 387
+F M GI P+ TF V+ G LEE +FRM K
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 11/276 (3%)
Query: 215 LLRTGNSGGIVPWNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGL 274
+L G + +V + ++++G+ G+ + F+ M D+ +T+I AG+
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 275 LEFGRQMHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQI----NEPNVFLWTS 330
L G ++ + G ++D V SS I +Y KSG L A V+++++ PNV +T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 331 MISGCALHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEG-STYFRMMKDV 389
+I G G+ +A ++ +L +G+ P+ VT+ +I+ G L G + Y M+K
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 390 YCINPGVEHCTSMVDLYGRAGCLIETKNF---IFENGISHLTSVWKSFLSS-CRLHKNIE 445
Y P V +VD + G ++ F + I V+ S + CRL++ E
Sbjct: 457 Y--PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 446 MGKWVSEMLLQVAPSDPEAYILLSNMCTSNHRWDEA 481
K M + D + + + R +EA
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 164/406 (40%), Gaps = 51/406 (12%)
Query: 3 FSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVV----LVNS 58
F ++ ++ +G P+ T SS+ NL+ G ++ M++ G DVV LV+
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 59 ILDLYLKCKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLP----SKD 114
+ L A ++ ++ + +VV +N +I + +++L +FR + D
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 115 VVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHG 174
V ++ T++ I G AL L F M + G E + + +G QL
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 175 RVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGY 234
+ ++ D + + ++ + KC R + AS NL+ IV +N+M+ GY
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN----NLIEGKMEPDIVTYNTMICGY 646
Query: 235 VWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDA 294
+ ++ + F + + T+T +I ++ +M + + + G + +A
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 295 YVGSSLIHMYSKS-----------------------------------GSLDDAWVIFRQ 319
L+ +SKS G +D+A IF Q
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 320 INE----PNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPNEV 361
+ P+V + +I G G+ +A+ L+E ML G+ P+++
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 160/374 (42%), Gaps = 13/374 (3%)
Query: 9 MQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILD-LYLKCK 67
M+ G P T +++ + S ++ + + + M G D+ N IL + + +
Sbjct: 251 MEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR 310
Query: 68 AFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSL----DMFRNLPSKDVVSWNTIID 123
A E + E+ D V++NI+IR GD+E + +M + ++NT+I
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 124 GLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVITLALNG 183
GL A L+ + E G VT+ + LH ++T +
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 184 DNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWNGKYEDC 243
F +SL+ + C+ +T +A + + V + G +V N+++ G+ G +
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKV----VGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 244 LKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVGSSLIHM 303
+ M D T ++ G E R++ +++ G + D ++LI
Sbjct: 487 FSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 546
Query: 304 YSKSGSLDDAWVIFRQI----NEPNVFLWTSMISGCALHGKGKQASSLFEGMLNQGIVPN 359
YSK G A+++ ++ P + + +++ G + + +G+ A L M ++GIVPN
Sbjct: 547 YSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Query: 360 EVTFLGVINACSHV 373
+ +F VI A S++
Sbjct: 607 DSSFCSVIEAMSNL 620
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 123/298 (41%), Gaps = 20/298 (6%)
Query: 105 DMFRNLPSKDVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXX 164
DM+R +V ++N +I+ L + G ++A L M G + + VT+
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 165 XVELGKQLHGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGI 224
+E + + + + D + ++ C GR + +LR G+
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE-----------VLREMKEIGL 323
Query: 225 VP----WNSMVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQ 280
VP +N ++ G NG E MV + + T T+I +E
Sbjct: 324 VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEI 383
Query: 281 MHAYIQKIGHRIDAYVGSSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCA 336
+ I++ G +D+ + LI+ Y + G A+ + ++ +P F +TS+I
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 337 LHGKGKQASSLFEGMLNQGIVPNEVTFLGVINACSHVGLLEEGSTYFRMMKDVYCINP 394
K ++A LFE ++ +G+ P+ V +++ +G ++ + + M D+ INP
Sbjct: 444 RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM-DMMSINP 500
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 116/279 (41%), Gaps = 12/279 (4%)
Query: 1 MVFSLFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSIL 60
M F+ EM +G P YT +++ E ++ + + + G+ D V N ++
Sbjct: 345 MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILI 404
Query: 61 DLYLK----CKAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK--- 113
+ Y + KAF + + + T+ +I ++ ++F + K
Sbjct: 405 NGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMK 464
Query: 114 -DVVSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQL 172
D+V NT++DG G RA LL M +VT+ E ++L
Sbjct: 465 PDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAREL 524
Query: 173 HGRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVS 232
G + + D+ ++L+ Y K G T K + +++D +L G + ++ +N+++
Sbjct: 525 MGEMKRRGIKPDHISYNTLISGYSKKGDT-KHAFMVRD---EMLSLGFNPTLLTYNALLK 580
Query: 233 GYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACAN 271
G N + E + R M E + + + +VI A +N
Sbjct: 581 GLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/381 (17%), Positives = 160/381 (41%), Gaps = 19/381 (4%)
Query: 6 FREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYLK 65
F M+ KG P T + + S ++ +A M R + ++V N ++++ K
Sbjct: 178 FYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCK 237
Query: 66 CKAFEYAER---LFELTG-EGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSK----DVVS 117
+ A+ + E+ G + +VT+N +++ + G +E + + + SK D+ +
Sbjct: 238 EGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQT 297
Query: 118 WNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLHGRVI 177
+N I+ + G RA E+L M E G V++ +E+ ++
Sbjct: 298 YNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMV 354
Query: 178 TLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVPWNSMVSGYVWN 237
+ + ++L+ + + A ++++++ G V +N +++GY +
Sbjct: 355 KQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI----REKGIVLDSVTYNILINGYCQH 410
Query: 238 GKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIGHRIDAYVG 297
G + M+ + T T++I ++ + G + D +
Sbjct: 411 GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 470
Query: 298 SSLIHMYSKSGSLDDAWVIFRQIN----EPNVFLWTSMISGCALHGKGKQASSLFEGMLN 353
++L+ + G++D A+ + ++++ P+ + ++ G GK ++A L M
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 530
Query: 354 QGIVPNEVTFLGVINACSHVG 374
+GI P+ +++ +I+ S G
Sbjct: 531 RGIKPDHISYNTLISGYSKKG 551
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 161/379 (42%), Gaps = 29/379 (7%)
Query: 5 LFREMQAKGACPNQYTLSSVFKCCSAEKNLQLGKGVHAWMLRNGVDADVVLVNSILDLYL 64
+++EM + PN +T + V + + V M G +VV N+++D Y
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 65 KC-------KAFEYAERLFELTGEGDVVTWNIMIRAYLGAGDVEKSLDMFRNLPSKDV-- 115
K KA + + E ++ T+NI+I + ++ S+ +F+ + +DV
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 116 --VSWNTIIDGLIRCGYERRALELLFCMVENGTEFSEVTFXXXXXXXXXXXXVELGKQLH 173
+S+N++I+GL G A+ + MV G + + +T+ ++ +
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 174 GRVITLALNGDNFINSSLVEMYCKCGRTDKASVILKDVPLNLLRTGNSGGIVP----WNS 229
G V + + L++ YCK G+ D + +++ GIVP +N
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM--------EREGIVPDVGTYNC 441
Query: 230 MVSGYVWNGKYEDCLKTFRSMVHELAIVDIRTVTTVISACANAGLLEFGRQMHAYIQKIG 289
+++G NG E K F + + + D+ T ++ G + + K+G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSK-GLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 290 HRIDAYVGSSLIHMYSKSGSLDDAWVIFRQINEP-----NVFLWTSMISGCALHGKGKQA 344
+ + ++ Y K G+L A + Q+ + NV + ++ G + GK + A
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Query: 345 SSLFEGMLNQGIVPNEVTF 363
+ L ML +G+VPN +T+
Sbjct: 561 NMLLNEMLEKGLVPNRITY 579