Miyakogusa Predicted Gene
- Lj1g3v2628740.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2628740.3 tr|G7L3K0|G7L3K0_MEDTR DEAD-box ATP-dependent RNA
helicase OS=Medicago truncatula GN=MTR_7g076820
PE,82.35,0.000000000000003,DEAD-like helicases superfamily,Helicase,
superfamily 1/2, ATP-binding domain; helicase superfamily
,CUFF.29479.3
(521 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 816 0.0
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 816 0.0
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 772 0.0
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 769 0.0
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 769 0.0
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 290 1e-78
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 288 8e-78
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 288 9e-78
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 283 1e-76
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 281 7e-76
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 280 2e-75
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 280 2e-75
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 276 3e-74
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 275 6e-74
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 253 2e-67
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 253 2e-67
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 233 2e-61
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 223 2e-58
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 221 7e-58
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 221 8e-58
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 220 2e-57
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 216 3e-56
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 215 6e-56
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 215 7e-56
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 215 7e-56
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 215 7e-56
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 215 7e-56
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 214 1e-55
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 214 1e-55
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 212 5e-55
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 206 3e-53
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 205 8e-53
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 202 5e-52
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 202 5e-52
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 199 3e-51
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 199 4e-51
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 196 4e-50
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 193 2e-49
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 193 3e-49
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 190 3e-48
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 187 1e-47
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 186 3e-47
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 186 3e-47
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 186 5e-47
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 184 1e-46
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 184 2e-46
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 184 2e-46
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 184 2e-46
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 183 3e-46
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 182 6e-46
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 181 1e-45
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 180 3e-45
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 179 3e-45
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 179 3e-45
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 176 3e-44
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 176 3e-44
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 174 1e-43
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 172 4e-43
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 172 4e-43
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 169 3e-42
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 161 1e-39
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 159 4e-39
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 156 3e-38
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 155 6e-38
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 154 1e-37
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 154 1e-37
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 154 1e-37
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 153 2e-37
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 152 4e-37
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 147 2e-35
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 135 6e-32
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 134 2e-31
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 130 2e-30
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 127 2e-29
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 124 2e-28
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 121 9e-28
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 106 4e-23
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 75 2e-13
AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 71 1e-12
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 71 2e-12
AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2... 62 7e-10
AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase (... 60 4e-09
AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 | chr1:1... 54 4e-07
AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 53 6e-07
AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase... 52 1e-06
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 51 2e-06
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/434 (90%), Positives = 412/434 (94%), Gaps = 2/434 (0%)
Query: 90 WLRRTQLGGNDTN--VVEEVEKTVQSESADPSSQDWKARLKIPPPDTRYQTEDVTATKGN 147
WLRR Q+ G ++N V EVEKTVQSE DP+S+DWKARLK+P PDTRY+TEDVTATKGN
Sbjct: 72 WLRRGQIPGGNSNGDAVVEVEKTVQSEVIDPNSEDWKARLKLPAPDTRYRTEDVTATKGN 131
Query: 148 EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 207
EFEDYFLKRELLMGIYEKGFE+PSPIQEESIPIALTG DILARAKNGTGKTAAFCIP LE
Sbjct: 132 EFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLE 191
Query: 208 KIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVH 267
KID DNNVIQ VI+VPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVH
Sbjct: 192 KIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVH 251
Query: 268 LLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYS 327
LLVGTPGRILDL KKGVC+LKDCS+LVMDEADKLLS EFQPS+E LI FL +RQILM+S
Sbjct: 252 LLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFS 311
Query: 328 ATYPVTVKDFKERYLRKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQS 387
AT+PVTVKDFK+R+L PYVINLMDELTLKGITQFYAFVEERQK+HCLNTLFSKLQINQS
Sbjct: 312 ATFPVTVKDFKDRFLTNPYVINLMDELTLKGITQFYAFVEERQKIHCLNTLFSKLQINQS 371
Query: 388 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 447
IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG
Sbjct: 372 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 431
Query: 448 IDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEI 507
IDIQAVNVVINFDFPKNAETYLHRVGRSGR+GHLGLAVNLITYEDRFNLYRIEQELGTEI
Sbjct: 432 IDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEI 491
Query: 508 KQIPPHIDQAIYCR 521
KQIPPHIDQAIYC+
Sbjct: 492 KQIPPHIDQAIYCQ 505
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/434 (90%), Positives = 412/434 (94%), Gaps = 2/434 (0%)
Query: 90 WLRRTQLGGNDTN--VVEEVEKTVQSESADPSSQDWKARLKIPPPDTRYQTEDVTATKGN 147
WLRR Q+ G ++N V EVEKTVQSE DP+S+DWKARLK+P PDTRY+TEDVTATKGN
Sbjct: 72 WLRRGQIPGGNSNGDAVVEVEKTVQSEVIDPNSEDWKARLKLPAPDTRYRTEDVTATKGN 131
Query: 148 EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 207
EFEDYFLKRELLMGIYEKGFE+PSPIQEESIPIALTG DILARAKNGTGKTAAFCIP LE
Sbjct: 132 EFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLE 191
Query: 208 KIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVH 267
KID DNNVIQ VI+VPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVH
Sbjct: 192 KIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVH 251
Query: 268 LLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYS 327
LLVGTPGRILDL KKGVC+LKDCS+LVMDEADKLLS EFQPS+E LI FL +RQILM+S
Sbjct: 252 LLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFS 311
Query: 328 ATYPVTVKDFKERYLRKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQS 387
AT+PVTVKDFK+R+L PYVINLMDELTLKGITQFYAFVEERQK+HCLNTLFSKLQINQS
Sbjct: 312 ATFPVTVKDFKDRFLTNPYVINLMDELTLKGITQFYAFVEERQKIHCLNTLFSKLQINQS 371
Query: 388 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 447
IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG
Sbjct: 372 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 431
Query: 448 IDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEI 507
IDIQAVNVVINFDFPKNAETYLHRVGRSGR+GHLGLAVNLITYEDRFNLYRIEQELGTEI
Sbjct: 432 IDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEI 491
Query: 508 KQIPPHIDQAIYCR 521
KQIPPHIDQAIYC+
Sbjct: 492 KQIPPHIDQAIYCQ 505
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/433 (85%), Positives = 405/433 (93%), Gaps = 2/433 (0%)
Query: 90 WLRRTQLGGNDTNVVEEVEKTVQSES-ADPSSQDWKARLKIPPPDTRYQTEDVTATKGNE 148
W RR QL G D + ++EVEKTVQSE+ +D +++DWKA LK+PP D RYQTEDVTATKGNE
Sbjct: 97 WSRRAQLPG-DPSYIDEVEKTVQSEAISDSNNEDWKATLKLPPRDNRYQTEDVTATKGNE 155
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FEDYFLKR+LL GIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKT AFCIP LEK
Sbjct: 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEK 215
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
ID +NNVIQ VILVPTRELALQTSQVCKEL K+LKI+VMVTTGGTSL+DDIMRLYQPVHL
Sbjct: 216 IDPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHL 275
Query: 269 LVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSA 328
LVGTPGRILDLAKKGVC+LKDC+MLVMDEADKLLS EFQPSIE+LIQFL +RQILM+SA
Sbjct: 276 LVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMFSA 335
Query: 329 TYPVTVKDFKERYLRKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI 388
T+PVTVK FK+RYL+KPY+INLMD+LTL G+TQ+YAFVEERQKVHCLNTLFSKLQINQSI
Sbjct: 336 TFPVTVKSFKDRYLKKPYIINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSI 395
Query: 389 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 448
IFCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFHDFRNGACRNLVCTDLFTRGI
Sbjct: 396 IFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGI 455
Query: 449 DIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIK 508
DIQAVNVVINFDFP+ +E+YLHRVGRSGR+GHLGLAVNL+TYEDRF +Y+ EQELGTEIK
Sbjct: 456 DIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIK 515
Query: 509 QIPPHIDQAIYCR 521
IP ID+AIYC+
Sbjct: 516 PIPSLIDKAIYCQ 528
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/433 (84%), Positives = 400/433 (92%), Gaps = 1/433 (0%)
Query: 90 WLRRTQLGGNDTNVVEEVEKTVQSE-SADPSSQDWKARLKIPPPDTRYQTEDVTATKGNE 148
W RR QL GN +N E V++T Q E S+D + QDWKA L++PPPDTRYQT DVTATKGNE
Sbjct: 66 WSRRPQLPGNASNANEVVQQTTQPEASSDANGQDWKATLRLPPPDTRYQTADVTATKGNE 125
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FEDYFLKR+LL GIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKT AFCIP LEK
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
ID +NNVIQ +ILVPTRELALQTSQVCKEL K+L IQVMVTTGGTSL+DDIMRL+QPVHL
Sbjct: 186 IDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHL 245
Query: 269 LVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSA 328
LVGTPGRILDL KKGVC+LKDC+MLVMDEADKLLS EFQPS+E+LIQFL NRQ LM+SA
Sbjct: 246 LVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSA 305
Query: 329 TYPVTVKDFKERYLRKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI 388
T+PVTVK FK+R+LRKPYVINLMD+LTL G+TQ+YAFVEERQKVHCLNTLFSKLQINQSI
Sbjct: 306 TFPVTVKAFKDRHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSI 365
Query: 389 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 448
IFCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFH+FRNGACRNLVCTDLFTRGI
Sbjct: 366 IFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGI 425
Query: 449 DIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIK 508
DIQAVNVVINFDFP+ +E+YLHRVGRSGR+GHLGLAVNL+TYEDRF +Y+ EQELGTEIK
Sbjct: 426 DIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIK 485
Query: 509 QIPPHIDQAIYCR 521
IP +IDQAIYC+
Sbjct: 486 PIPSNIDQAIYCQ 498
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/433 (84%), Positives = 400/433 (92%), Gaps = 1/433 (0%)
Query: 90 WLRRTQLGGNDTNVVEEVEKTVQSE-SADPSSQDWKARLKIPPPDTRYQTEDVTATKGNE 148
W RR QL GN +N E V++T Q E S+D + QDWKA L++PPPDTRYQT DVTATKGNE
Sbjct: 66 WSRRPQLPGNASNANEVVQQTTQPEASSDANGQDWKATLRLPPPDTRYQTADVTATKGNE 125
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FEDYFLKR+LL GIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKT AFCIP LEK
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
ID +NNVIQ +ILVPTRELALQTSQVCKEL K+L IQVMVTTGGTSL+DDIMRL+QPVHL
Sbjct: 186 IDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHL 245
Query: 269 LVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSA 328
LVGTPGRILDL KKGVC+LKDC+MLVMDEADKLLS EFQPS+E+LIQFL NRQ LM+SA
Sbjct: 246 LVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSA 305
Query: 329 TYPVTVKDFKERYLRKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI 388
T+PVTVK FK+R+LRKPYVINLMD+LTL G+TQ+YAFVEERQKVHCLNTLFSKLQINQSI
Sbjct: 306 TFPVTVKAFKDRHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSI 365
Query: 389 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 448
IFCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFH+FRNGACRNLVCTDLFTRGI
Sbjct: 366 IFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGI 425
Query: 449 DIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIK 508
DIQAVNVVINFDFP+ +E+YLHRVGRSGR+GHLGLAVNL+TYEDRF +Y+ EQELGTEIK
Sbjct: 426 DIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIK 485
Query: 509 QIPPHIDQAIYCR 521
IP +IDQAIYC+
Sbjct: 486 PIPSNIDQAIYCQ 498
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 232/372 (62%), Gaps = 2/372 (0%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F D +K ++L G+YE GFEKPS IQ+ ++ L G D++A+A++GTGKT+ + +
Sbjct: 37 FNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQV 96
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
+D + +Q +IL PTRELA QT + + +G H IQ GG S+ +DI +L VH+
Sbjct: 97 VDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHV 156
Query: 269 LVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSA 328
+ GTPGR+ D+ K+ + +L++DE+D++LS F+ I + ++L P+ Q+ + SA
Sbjct: 157 VSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVSA 216
Query: 329 TYPVTVKDFKERYLRKPYVINLM-DELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 386
T P + + +++ +P I + DELTL+GI QF+ VE E K L L+ L I Q
Sbjct: 217 TLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQ 276
Query: 387 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 446
++IFCN+ +V+ L++K+ ++ +H M Q R+ + ++FR+G R L+ TD++ R
Sbjct: 277 AVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWAR 336
Query: 447 GIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTE 506
GID+Q V++VIN+D P N E Y+HR+GRSGR+G G+A+N + +D L IEQ T+
Sbjct: 337 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQ 396
Query: 507 IKQIPPHIDQAI 518
I ++P ++ I
Sbjct: 397 IDEMPMNVADLI 408
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 224/368 (60%), Gaps = 2/368 (0%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F+ L+ LL GIY GFEKPS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 100
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
+D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 101 LDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHV 160
Query: 269 LVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSA 328
+VGTPGR+ D+ K+ + M V+DEAD++LS F+ I + Q L P Q+ ++SA
Sbjct: 161 VVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
Query: 329 TYPVTVKDFKERYLRKPYVINLM-DELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 386
T P + +++ KP I + DELTL+GI QFY VE E K+ L L+ L I Q
Sbjct: 221 TMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 280
Query: 387 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 446
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
Query: 447 GIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTE 506
GID+Q V++VINFD P E YLHR+GRSGR+G G+A+N +T +D L+ I++
Sbjct: 341 GIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 400
Query: 507 IKQIPPHI 514
++++P ++
Sbjct: 401 VEELPSNV 408
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 288 bits (736), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 224/368 (60%), Gaps = 2/368 (0%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F+ L+ LL GIY GFEKPS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 31 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 90
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
+D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 91 LDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHV 150
Query: 269 LVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSA 328
+VGTPGR+ D+ K+ + M V+DEAD++LS F+ I + Q L P Q+ ++SA
Sbjct: 151 VVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 210
Query: 329 TYPVTVKDFKERYLRKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 386
T P + +++ KP I + DELTL+GI QFY VE E K+ L L+ L I Q
Sbjct: 211 TMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 270
Query: 387 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 446
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 271 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 330
Query: 447 GIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTE 506
GID+Q V++VINFD P E YLHR+GRSGR+G G+A+N +T +D L+ I++
Sbjct: 331 GIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 390
Query: 507 IKQIPPHI 514
++++P ++
Sbjct: 391 VEELPSNV 398
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/369 (40%), Positives = 227/369 (61%), Gaps = 4/369 (1%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F+ L+ LL GIY GFEKPS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 100
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
+D+ Q ++L PTRELA Q +V + LG + ++V GGTS+++D L VH+
Sbjct: 101 LDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHV 160
Query: 269 LVGTPGRILDLAKKGVCILKDC-SMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYS 327
+VGTPGR+ D+ ++ + DC M V+DEAD++LS F+ I + Q L P Q+ ++S
Sbjct: 161 VVGTPGRVFDMLRRQ-SLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
Query: 328 ATYPVTVKDFKERYLRKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQIN 385
AT P + +++ KP I + DELTL+GI QFY VE E K+ L L+ L I
Sbjct: 220 ATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAIT 279
Query: 386 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 445
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
Query: 446 RGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGT 505
RGID+Q V++VINFD P E YLHR+GRSGR+G G+A+N +T +D+ L+ I++
Sbjct: 340 RGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNV 399
Query: 506 EIKQIPPHI 514
++++P ++
Sbjct: 400 VVEELPSNV 408
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 281 bits (719), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 212/346 (61%), Gaps = 2/346 (0%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F+ L+ LL GIY GFEKPS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 100
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
+D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 101 LDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHV 160
Query: 269 LVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSA 328
+VGTPGR+ D+ K+ + M V+DEAD++LS F+ I + Q L P Q+ ++SA
Sbjct: 161 VVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
Query: 329 TYPVTVKDFKERYLRKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 386
T P + +++ KP I + DELTL+GI QFY VE E K+ L L+ L I Q
Sbjct: 221 TMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 280
Query: 387 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 446
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
Query: 447 GIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
GID+Q V++VINFD P E YLHR+GRSGR+G G+A+N +T +D
Sbjct: 341 GIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 386
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/360 (40%), Positives = 220/360 (61%), Gaps = 5/360 (1%)
Query: 160 MGIYE---KGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVI 216
MG+ E +GFEKPS IQ+ I G D++ +A++GTGKTA FC L+++D
Sbjct: 44 MGLQENLLRGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQC 103
Query: 217 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 276
Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH++VGTPGR+
Sbjct: 104 QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRV 163
Query: 277 LDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKD 336
D+ K+ + M V+DEAD++LS F+ I + Q L P Q+ ++SAT P +
Sbjct: 164 FDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALE 223
Query: 337 FKERYLRKPYVINLM-DELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSV 394
+++ KP I + DELTL+GI QFY VE E K+ L L+ L I QS+IF N+
Sbjct: 224 ITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTR 283
Query: 395 NRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVN 454
+V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V+
Sbjct: 284 RKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVS 343
Query: 455 VVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 514
+VINFD P E YLHR+GRSGR+G G+A+N +T +D L+ I++ ++++P ++
Sbjct: 344 LVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNV 403
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 222/370 (60%), Gaps = 2/370 (0%)
Query: 147 NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
+ F+ L+ +LL GIY GFEKPS IQ+ I G D++ +A++GTGKTA FC L
Sbjct: 41 DSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVL 100
Query: 207 EKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 266
+++D Q ++L PTRELA Q +V + LG +L ++ GGTS+++D L V
Sbjct: 101 QQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGV 160
Query: 267 HLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMY 326
H++VGTPGR+ DL ++ M V+DEAD++LS F+ I + Q L Q+ ++
Sbjct: 161 HVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF 220
Query: 327 SATYPVTVKDFKERYLRKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQI 384
SAT P + +++ KP I + DELTL+GI QFY V+ E K+ L L+ L I
Sbjct: 221 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAI 280
Query: 385 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 444
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 281 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 340
Query: 445 TRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELG 504
RGID+Q V++VINFD P E YLHR+GRSGR+G G+A+N +T ED + I++
Sbjct: 341 ARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYN 400
Query: 505 TEIKQIPPHI 514
++++P ++
Sbjct: 401 VVVEELPSNV 410
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/378 (36%), Positives = 230/378 (60%), Gaps = 6/378 (1%)
Query: 143 ATKG----NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKT 198
TKG F+D + ++L G+Y+ G++KPS IQ+ ++ L G D++A+A++GTGKT
Sbjct: 14 TTKGIKPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKT 73
Query: 199 AAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDD 258
+ I + ++ + +QV++L P+RELA QT + + +G H IQ GG S+ +D
Sbjct: 74 SMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGED 133
Query: 259 IMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLS 318
I +L + VH + GTPGR+ D+ K+G K +LV+DE+D++LS + I + + L
Sbjct: 134 IKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALP 193
Query: 319 PNRQILMYSATYPVTVKDFKERYLRKPYVINLM-DELTLKGITQFYAFVE-ERQKVHCLN 376
+ Q+ + SAT P + + E+++ P I + DELTL+GI Q+Y V+ E K L
Sbjct: 194 HDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLC 253
Query: 377 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 436
L+ +L INQ+IIFCN+ +V+ L +K+ + +H Q R+ + + FR+ R
Sbjct: 254 DLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSR 313
Query: 437 NLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNL 496
L+ +D++ RGID+Q V+ VIN+D P N E Y+HR+GR+GR+G G+A+N + D +L
Sbjct: 314 VLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDL 373
Query: 497 YRIEQELGTEIKQIPPHI 514
IE+ GT+I+++P +
Sbjct: 374 KDIERHYGTKIREMPADL 391
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 223/361 (61%), Gaps = 7/361 (1%)
Query: 160 MGIYE---KGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVI 216
MG+ E +GFEKPS IQ+ I G D++ +A++GTGKTA FC L+++D+
Sbjct: 44 MGLQENLLRGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQC 103
Query: 217 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 276
Q ++L PTRELA Q +V + LG + ++V GGTS+++D L VH++VGTPGR+
Sbjct: 104 QALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRV 163
Query: 277 LDLAKKGVCILKDC-SMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVK 335
D+ ++ + DC M V+DEAD++LS F+ I + Q L P Q+ ++SAT P
Sbjct: 164 FDMLRRQ-SLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEAL 222
Query: 336 DFKERYLRKPYVINLM-DELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNS 393
+ +++ KP I + DELTL+GI QFY VE E K+ L L+ L I QS+IF N+
Sbjct: 223 EITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNT 282
Query: 394 VNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAV 453
+V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V
Sbjct: 283 RRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQV 342
Query: 454 NVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPH 513
++VINFD P E YLHR+GRSGR+G G+A+N +T +D+ L+ I++ ++++P +
Sbjct: 343 SLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSN 402
Query: 514 I 514
+
Sbjct: 403 V 403
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 229/403 (56%), Gaps = 12/403 (2%)
Query: 128 KIPPPDTRYQTEDV----TATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALT 183
K+P + E V + F D+ LK ELL I + GFE PS +Q E IP A+
Sbjct: 23 KVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 184 GSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHL- 242
G D++ +AK+G GKTA F + L++I+ + ++L TRELA Q +L
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLP 142
Query: 243 KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADK 300
+V V GG ++K D+++ P H++VGTPGR+L LA++ LK+ ++DE DK
Sbjct: 143 DTKVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDK 201
Query: 301 LL-SPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDE--LTLK 357
+L S + + ++++ + ++Q++M+SAT ++ +++++ P I + DE LTL
Sbjct: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
Query: 358 GITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 417
G+ Q Y + E +K LN L L NQ +IF SV+R L K + E + IH+
Sbjct: 262 GLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
Query: 418 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GR
Sbjct: 322 MSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 478 YGHLGLAVNLI-TYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 519
+G GLA+ + + D L ++++ +IK++P ID + Y
Sbjct: 382 FGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTY 424
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 229/403 (56%), Gaps = 12/403 (2%)
Query: 128 KIPPPDTRYQTEDV----TATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALT 183
K+P + E V + F D+ LK ELL I + GFE PS +Q E IP A+
Sbjct: 23 KVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 184 GSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHL- 242
G D++ +AK+G GKTA F + L++I+ + ++L TRELA Q +L
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLP 142
Query: 243 KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADK 300
+V V GG ++K D+++ P H++VGTPGR+L LA++ LK+ ++DE DK
Sbjct: 143 DTKVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDK 201
Query: 301 LL-SPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDE--LTLK 357
+L S + + ++++ + ++Q++M+SAT ++ +++++ P I + DE LTL
Sbjct: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
Query: 358 GITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 417
G+ Q Y + E +K LN L L NQ +IF SV+R L K + E + IH+
Sbjct: 262 GLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
Query: 418 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GR
Sbjct: 322 MSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 478 YGHLGLAVNLI-TYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 519
+G GLA+ + + D L ++++ +IK++P ID + Y
Sbjct: 382 FGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTY 424
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/444 (32%), Positives = 229/444 (51%), Gaps = 53/444 (11%)
Query: 128 KIPPPDTRYQTEDV----TATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALT 183
K+P + E V + F D+ LK ELL I + GFE PS +Q E IP A+
Sbjct: 23 KVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 184 GSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHL- 242
G D++ +AK+G GKTA F + L++I+ + ++L TRELA Q +L
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLP 142
Query: 243 KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADK 300
+V V GG ++K D+++ P H++VGTPGR+L LA++ LK+ ++DE DK
Sbjct: 143 DTKVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDK 201
Query: 301 LL-SPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRK--------------- 344
+L S + + ++++ + ++Q++M+SAT ++ +++++
Sbjct: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWV 261
Query: 345 --------------------------PYVINLMDE--LTLKGITQFYAFVEERQKVHCLN 376
P I + DE LTL G+ Q Y + E +K LN
Sbjct: 262 GFGSGYCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 321
Query: 377 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 436
L L NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R
Sbjct: 322 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKR 381
Query: 437 NLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLI-TYEDRFN 495
LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GR+G GLA+ + + D
Sbjct: 382 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEV 441
Query: 496 LYRIEQELGTEIKQIPPHIDQAIY 519
L ++++ +IK++P ID + Y
Sbjct: 442 LNQVQERFEVDIKELPEQIDTSTY 465
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 199/374 (53%), Gaps = 9/374 (2%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FE L E+L + GF P+PIQ ++ PIAL DI+A AK G+GKT + IPA
Sbjct: 437 FESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFIL 496
Query: 209 IDH----DNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 264
+ H N V+IL PTRELA Q G+ +I GG + L +
Sbjct: 497 LRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELER 556
Query: 265 PVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQIL 324
++V TPGR+ D+ + + + S+LV+DEAD++L F+P I +++ + P RQ L
Sbjct: 557 GADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTL 616
Query: 325 MYSATYPVTVKDFKERYLRKPYVINL--MDELTL-KGITQFYAFVEERQKVHCLNTLF-S 380
MY+AT+P V+ L P +N+ +DEL K ITQ+ V + +K L + S
Sbjct: 617 MYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRS 676
Query: 381 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 440
+ + ++ IIFC++ + LA+ + + IH Q R+ V + FR+G L+
Sbjct: 677 QERGSKVIIFCSTKRLCDHLARSVGRH-FGAVVIHGDKTQGERDWVLNQFRSGKSCVLIA 735
Query: 441 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIE 500
TD+ RG+DI+ + VVIN+DFP E Y+HR+GR+GR G G+A T +D +
Sbjct: 736 TDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLI 795
Query: 501 QELGTEIKQIPPHI 514
+ L +Q+PP +
Sbjct: 796 KVLEGANQQVPPQV 809
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 215/398 (54%), Gaps = 23/398 (5%)
Query: 136 YQTEDVTATKGNE-------FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDIL 188
Y+TE + +G + F+D +L I + GF +P+PIQ + P+AL G D++
Sbjct: 147 YRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLI 206
Query: 189 ARAKNGTGKTAAFCIPAL------EKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHL 242
A+ G+GKT A+ +PAL ++ D+ I V+IL PTRELA+Q + ++ G
Sbjct: 207 GIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPI-VLILAPTRELAVQIQEESRKFGLRS 265
Query: 243 KIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLL 302
++ GG I L + V +++ TPGR++D+ + LK + LV+DEAD++L
Sbjct: 266 GVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRML 325
Query: 303 SPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPY--VINLMDELTLKGIT 360
F+P I +++ + P+RQ L++SAT+P V+ ++LR PY +I D + I
Sbjct: 326 DMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSIN 385
Query: 361 QFYAFVEERQKVHCLNTLFSKLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKML 419
Q V +K + L TL +L I IF + + + +++ G+ IH
Sbjct: 386 QVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKT 445
Query: 420 QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYG 479
Q R+RV +F++G + TD+ RG+D++ + V+N+DFP E Y+HR+GR+GR G
Sbjct: 446 QSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAG 505
Query: 480 HLGLAVNLITYED-RF--NLYRIEQELGTEIKQIPPHI 514
G+A T+++ +F L +I QE G + +PP +
Sbjct: 506 AKGMAFTFFTHDNAKFARELVKILQEAG---QVVPPTL 540
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 153/466 (32%), Positives = 228/466 (48%), Gaps = 79/466 (16%)
Query: 128 KIPPPDTRYQTEDV----TATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALT 183
K+P + E V + F D+ LK ELL I + GFE PS +Q E IP A+
Sbjct: 23 KVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 184 GSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHL- 242
G D++ +AK+G GKTA F + L++I+ + ++L TRELA Q +L
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLP 142
Query: 243 KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADK 300
+V V GG ++K D+++ P H++VGTPGR+L LA++ LK+ ++DE DK
Sbjct: 143 DTKVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDK 201
Query: 301 LL-----------------------------SPEFQPSIEQLIQ---------------- 315
+L S E +P ++ +Q
Sbjct: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDFLENETVSVRLFSFG 261
Query: 316 -----------------FLSPNRQILMYSATYPVTVKDFKE-RYLR-KPYVINLMDE--L 354
++S R ILM+ + + F+E R+ R P I + DE L
Sbjct: 262 VENSEWRLCSFGFIVLVWVSMFRAILMFHSKTHI----FEEKRWTRISPMEIYVDDEAKL 317
Query: 355 TLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYI 414
TL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E + I
Sbjct: 318 TLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 377
Query: 415 HAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGR 474
H+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR
Sbjct: 378 HSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 437
Query: 475 SGRYGHLGLAVNLI-TYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 519
+GR+G GLA+ + + D L ++++ +IK++P ID + Y
Sbjct: 438 AGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTY 483
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 209/397 (52%), Gaps = 15/397 (3%)
Query: 132 PDTRYQTEDVTATKGN------EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGS 185
P+ + ++T + G FE L ELL +Y GF PSPIQ +S PIA+
Sbjct: 140 PEAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNR 199
Query: 186 DILARAKNGTGKTAAFCIPA---LEKIDHDNNV-IQVVILVPTRELALQTSQVCKELGKH 241
DI+A AK G+GKT + IP L++I +D+ + +++L PTRELA Q + GK
Sbjct: 200 DIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKS 259
Query: 242 LKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKL 301
KI GG + + + V ++V TPGR+ D+ + L S LV+DEAD++
Sbjct: 260 SKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRM 319
Query: 302 LSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINL--MDELTL-KG 358
L F+P I +++ + RQ LMY+AT+P V+ L P +N+ +DEL K
Sbjct: 320 LDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKS 379
Query: 359 ITQFYAFVEERQKVHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 417
ITQ + +K L + S+ ++ IIFC++ + LA+ +T + IH
Sbjct: 380 ITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGD 438
Query: 418 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
Q R+ V + FR+G LV TD+ RG+D++ + VV+N+DFP E Y+HR+GR+GR
Sbjct: 439 KSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGR 498
Query: 478 YGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 514
G GLA +D + + + L +++PP +
Sbjct: 499 AGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQV 535
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 198/371 (53%), Gaps = 18/371 (4%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F DY L+ + + GF +P+PIQ + P+A+ G D++ A+ G+GKT ++ +PA+
Sbjct: 106 FPDYVLEE-----VKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVH 160
Query: 209 ID------HDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRL 262
++ H + I V++L PTRELA+Q Q + G KI+ GG + L
Sbjct: 161 VNAQPMLAHGDGPI-VLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDL 219
Query: 263 YQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQ 322
+ V +++ TPGR++D+ + L+ + LV+DEAD++L F P I +++ + P+RQ
Sbjct: 220 QKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQ 279
Query: 323 ILMYSATYPVTVKDFKERYLRKPY--VINLMDELTLKGITQFYAFVEERQKVHCLNTLFS 380
L +SAT+P V+ +++L PY +I D + I Q + E QK + L L
Sbjct: 280 TLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLE 339
Query: 381 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 439
+ I +F ++ + + +++ G+ IH Q R+ V +FR+G +
Sbjct: 340 DIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMT 399
Query: 440 CTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED-RF--NL 496
TD+ RG+D++ V VIN+DFP + E Y+HR+GR+GR G G A T + RF L
Sbjct: 400 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKEL 459
Query: 497 YRIEQELGTEI 507
I QE G ++
Sbjct: 460 TNILQEAGQKV 470
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 199/341 (58%), Gaps = 8/341 (2%)
Query: 186 DILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHL-KI 244
D++ +AK+G GKTA F + L++I+ + ++L TRELA Q +L
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDT 61
Query: 245 QVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLL 302
+V V GG ++K D+++ P H++VGTPGR+L LA++ LK+ ++DE DK+L
Sbjct: 62 KVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 120
Query: 303 -SPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDE--LTLKGI 359
S + + ++++ + ++Q++M+SAT ++ +++++ P I + DE LTL G+
Sbjct: 121 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 180
Query: 360 TQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKML 419
Q Y + E +K LN L L NQ +IF SV+R L K + E + IH+ M
Sbjct: 181 VQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 240
Query: 420 QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYG 479
Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GR+G
Sbjct: 241 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 300
Query: 480 HLGLAVNLI-TYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 519
GLA+ + + D L ++++ +IK++P ID + Y
Sbjct: 301 TKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTY 341
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 207/397 (52%), Gaps = 15/397 (3%)
Query: 132 PDTRYQTEDVTATKGN------EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGS 185
P+ + ++T + G FE ELL + GF P+PIQ +S PIA+ G
Sbjct: 137 PEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGR 196
Query: 186 DILARAKNGTGKTAAFCIPA---LEKIDHDNNV-IQVVILVPTRELALQTSQVCKELGKH 241
DI+A AK G+GKT + IP L++I +D+ + +++L PTRELA Q + + G+
Sbjct: 197 DIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRS 256
Query: 242 LKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKL 301
+I GG + L + ++V TPGR+ D+ + L+ S LV+DEAD++
Sbjct: 257 SRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRM 316
Query: 302 LSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINL--MDELTL-KG 358
L F+P I ++++ + RQ LMY+AT+P V+ L P +N+ +DEL K
Sbjct: 317 LDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKS 376
Query: 359 ITQFYAFVEERQKVHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 417
ITQ V +K L + S+ ++ IIFC++ + L + +T + IH
Sbjct: 377 ITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAAIHGD 435
Query: 418 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
Q R+ V + FR+G LV TD+ RG+D++ + V+N+DFP E Y+HR+GR+GR
Sbjct: 436 KSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGR 495
Query: 478 YGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 514
G G A +D + + + L +++PP I
Sbjct: 496 AGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQI 532
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 207/397 (52%), Gaps = 15/397 (3%)
Query: 132 PDTRYQTEDVTATKGN------EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGS 185
P+ + ++T + G FE ELL + GF P+PIQ +S PIA+ G
Sbjct: 137 PEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGR 196
Query: 186 DILARAKNGTGKTAAFCIPA---LEKIDHDNNV-IQVVILVPTRELALQTSQVCKELGKH 241
DI+A AK G+GKT + IP L++I +D+ + +++L PTRELA Q + + G+
Sbjct: 197 DIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRS 256
Query: 242 LKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKL 301
+I GG + L + ++V TPGR+ D+ + L+ S LV+DEAD++
Sbjct: 257 SRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRM 316
Query: 302 LSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINL--MDELTL-KG 358
L F+P I ++++ + RQ LMY+AT+P V+ L P +N+ +DEL K
Sbjct: 317 LDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKS 376
Query: 359 ITQFYAFVEERQKVHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 417
ITQ V +K L + S+ ++ IIFC++ + L + +T + IH
Sbjct: 377 ITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAAIHGD 435
Query: 418 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
Q R+ V + FR+G LV TD+ RG+D++ + V+N+DFP E Y+HR+GR+GR
Sbjct: 436 KSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGR 495
Query: 478 YGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 514
G G A +D + + + L +++PP I
Sbjct: 496 AGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQI 532
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 207/397 (52%), Gaps = 15/397 (3%)
Query: 132 PDTRYQTEDVTATKGN------EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGS 185
P+ + ++T + G FE ELL + GF P+PIQ +S PIA+ G
Sbjct: 137 PEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGR 196
Query: 186 DILARAKNGTGKTAAFCIPA---LEKIDHDNNV-IQVVILVPTRELALQTSQVCKELGKH 241
DI+A AK G+GKT + IP L++I +D+ + +++L PTRELA Q + + G+
Sbjct: 197 DIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRS 256
Query: 242 LKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKL 301
+I GG + L + ++V TPGR+ D+ + L+ S LV+DEAD++
Sbjct: 257 SRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRM 316
Query: 302 LSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINL--MDELTL-KG 358
L F+P I ++++ + RQ LMY+AT+P V+ L P +N+ +DEL K
Sbjct: 317 LDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKS 376
Query: 359 ITQFYAFVEERQKVHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 417
ITQ V +K L + S+ ++ IIFC++ + L + +T + IH
Sbjct: 377 ITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAAIHGD 435
Query: 418 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
Q R+ V + FR+G LV TD+ RG+D++ + V+N+DFP E Y+HR+GR+GR
Sbjct: 436 KSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGR 495
Query: 478 YGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 514
G G A +D + + + L +++PP I
Sbjct: 496 AGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQI 532
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 207/397 (52%), Gaps = 15/397 (3%)
Query: 132 PDTRYQTEDVTATKGN------EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGS 185
P+ + ++T + G FE ELL + GF P+PIQ +S PIA+ G
Sbjct: 137 PEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGR 196
Query: 186 DILARAKNGTGKTAAFCIPA---LEKIDHDNNV-IQVVILVPTRELALQTSQVCKELGKH 241
DI+A AK G+GKT + IP L++I +D+ + +++L PTRELA Q + + G+
Sbjct: 197 DIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRS 256
Query: 242 LKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKL 301
+I GG + L + ++V TPGR+ D+ + L+ S LV+DEAD++
Sbjct: 257 SRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRM 316
Query: 302 LSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINL--MDELTL-KG 358
L F+P I ++++ + RQ LMY+AT+P V+ L P +N+ +DEL K
Sbjct: 317 LDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKS 376
Query: 359 ITQFYAFVEERQKVHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 417
ITQ V +K L + S+ ++ IIFC++ + L + +T + IH
Sbjct: 377 ITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAAIHGD 435
Query: 418 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
Q R+ V + FR+G LV TD+ RG+D++ + V+N+DFP E Y+HR+GR+GR
Sbjct: 436 KSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGR 495
Query: 478 YGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 514
G G A +D + + + L +++PP I
Sbjct: 496 AGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQI 532
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 199/392 (50%), Gaps = 26/392 (6%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
+E+ L ELL + G++KPSPIQ +IP+ L D++ A+ G+GKTAAF +P L
Sbjct: 315 WEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAY 374
Query: 209 I--------DHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIM 260
I +++ V++ PTRELA Q + + +L +V GG S+++ +
Sbjct: 375 ISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGL 434
Query: 261 RLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPN 320
++ Q +++ TPGR++D ++ +L C+ +V+DEAD+++ F+P + ++ + +
Sbjct: 435 KITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSS 494
Query: 321 -----------------RQILMYSATYPVTVKDFKERYLRKPYVINL-MDELTLKGITQF 362
R M+SAT P V+ +YLR P V+ + T I+Q
Sbjct: 495 NLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQH 554
Query: 363 YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDH 422
++E +K L L +L +I+F N+ + +AK + + GY +H Q+
Sbjct: 555 VIMMKESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQ 614
Query: 423 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLG 482
R FR LV TD+ RGIDI V VIN+D PK+ E Y HR+GR+GR G G
Sbjct: 615 REISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSG 674
Query: 483 LAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 514
+A + +T D Y ++Q L +PP +
Sbjct: 675 VATSFLTLHDTEVFYDLKQMLVQSNSAVPPEL 706
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 205/384 (53%), Gaps = 14/384 (3%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE- 207
F + ++ EL+ G++ PS IQ E++P AL G D++ A+ G+GKT AF IP L+
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70
Query: 208 -----------KIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 256
K + +L PTRELA+Q ++ + LG + ++ V GG
Sbjct: 71 LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRM 130
Query: 257 DDIMRLYQPVHLLVGTPGRILD-LAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQ 315
+ L + H++V TPGR+ D ++ LK LV+DEAD+LL+ +F+ S+ Q+++
Sbjct: 131 QQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE 190
Query: 316 FLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDEL-TLKGITQFYAFVEERQKVHC 374
+ R+ ++SAT V+ + LR P I + T+ + Q Y FV + K
Sbjct: 191 EIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYKDCY 250
Query: 375 LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGA 434
L + S++ + S+IF + + LA + LG+ I +M Q R + F+ G
Sbjct: 251 LVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGE 310
Query: 435 CRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRF 494
C LVCTD+ +RG+DI +V+VVIN+D P N++ Y+HRVGR+ R G G+ ++L+ +
Sbjct: 311 CNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELE 370
Query: 495 NLYRIEQELGTEIKQIPPHIDQAI 518
+IE+ +G ++ + P D+ +
Sbjct: 371 WYIQIEKLIGKKLPEYPAEEDEVL 394
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 195/361 (54%), Gaps = 9/361 (2%)
Query: 162 IYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA---LEKIDHDNNV-IQ 217
+Y GF PSPIQ +S PIA+ DI+A AK G+GKT + IP L++I +D+ +
Sbjct: 244 VYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMGPT 303
Query: 218 VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRIL 277
+++L PTRELA Q + GK KI GG + + + V ++V TPGR+
Sbjct: 304 ILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLN 363
Query: 278 DLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDF 337
D+ + L S LV+DEAD++L F+P I +++ + RQ LMY+AT+P V+
Sbjct: 364 DILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKI 423
Query: 338 KERYLRKPYVINL--MDELTL-KGITQFYAFVEERQKVHCLNTLF-SKLQINQSIIFCNS 393
L P +N+ +DEL K ITQ + +K L + S+ ++ IIFC++
Sbjct: 424 AADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCST 483
Query: 394 VNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAV 453
+ LA+ +T + IH Q R+ V + FR+G LV TD+ RG+D++ +
Sbjct: 484 KRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDI 542
Query: 454 NVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPH 513
VV+N+DFP E Y+HR+GR+GR G GLA +D + + + L +++PP
Sbjct: 543 RVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQ 602
Query: 514 I 514
+
Sbjct: 603 V 603
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 199/372 (53%), Gaps = 15/372 (4%)
Query: 151 DYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID 210
D + E++ + +G EK PIQ+ + A+ G D++ RA+ GTGKT AF IP ++KI
Sbjct: 120 DLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 179
Query: 211 HDN------NVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 264
N Q ++L PTRELA Q + +E L + GGT + + L
Sbjct: 180 KFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSL--DTICLYGGTPIGQQMRELNY 237
Query: 265 PVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQIL 324
+ + VGTPGRI+DL K+G L + +V+DEAD++L F +E ++Q L RQ +
Sbjct: 238 GIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297
Query: 325 MYSATYPVTVKDFKERYLRKPYVINLM---DELTLKGITQFYAFVEERQKVHCLNTLFSK 381
M+SAT P ++ ++YL P I+L+ D+ GIT + + + + L +
Sbjct: 298 MFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKE 357
Query: 382 -LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 440
+ + I+F + + LA + + Y C +H + Q R R FR+G LV
Sbjct: 358 HGKGGKCIVFTQTKRDADRLAFGLAK-SYKCEALHGDISQAQRERTLAGFRDGNFSILVA 416
Query: 441 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYR-I 499
TD+ RG+D+ V++VI+++ P N ET++HR GR+GR G G A+ LI +D+ + I
Sbjct: 417 TDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAI-LIHGQDQTRAVKMI 475
Query: 500 EQELGTEIKQIP 511
E+E+G+ ++P
Sbjct: 476 EKEVGSRFNELP 487
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 180/340 (52%), Gaps = 15/340 (4%)
Query: 165 KGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVI-------- 216
K FEKPSPIQ + P L G D++ AK G+GKT AF IPA+ + N I
Sbjct: 132 KTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVN 191
Query: 217 -QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGR 275
++L PTRELA+Q S V +E G+ ++ + GG+S I + V +++GTPGR
Sbjct: 192 PTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGR 251
Query: 276 ILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVK 335
+ DL + V L D S +V+DEAD++L F+ + ++ + RQ++M+SAT+P+ V
Sbjct: 252 LRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVH 311
Query: 336 DFKERYLRK---PYVINLMDELTLKGITQFYAFVEER---QKVHCLNTLFSKLQINQSII 389
+ ++ +I +D + Q ++ER Q++ L + K Q N+ ++
Sbjct: 312 KLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLV 371
Query: 390 FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 449
F E L + + + G+ IH Q R R F+ G+C LV TD+ RG+D
Sbjct: 372 FALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLD 431
Query: 450 IQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLIT 489
I V VVIN+ FP E Y+HR+GR+GR G G+A T
Sbjct: 432 IPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFT 471
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 200/383 (52%), Gaps = 12/383 (3%)
Query: 144 TKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCI 203
T FE L + E G KP+P+Q +P L G D+L A+ G+GKTAAF +
Sbjct: 55 TSATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFAL 114
Query: 204 PALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 263
P L ++ D + +++ PTRELA Q ++ K LG L ++ V GG + M L
Sbjct: 115 PILHRLAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLV 174
Query: 264 QPVHLLVGTPGRILDLAKKG---VCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPN 320
H+++ TPGRI L + + LV+DEAD++L FQ + + Q L +
Sbjct: 175 SRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKS 234
Query: 321 RQILMYSATYPVTVKDFKERYLRKPYVINLMDEL-TLKGITQFYAFVEERQK----VHCL 375
RQ L++SAT ++ E K Y + L T+ +TQ + F ++ K VH L
Sbjct: 235 RQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHIL 294
Query: 376 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 435
+ + K I ++IF ++ + L+ + EL +H+ Q R F++G
Sbjct: 295 SQMEDK-GIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKV 353
Query: 436 RNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFN 495
L+ TD+ +RG+DI V++VIN+D P++ Y+HRVGR+ R G GLAV++IT D
Sbjct: 354 PILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKL 413
Query: 496 LYRIEQELGTEIKQIPPHIDQAI 518
+++IE+E+G K++ P+ + I
Sbjct: 414 IHKIEEEVG---KKMEPYNKKVI 433
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 196/366 (53%), Gaps = 15/366 (4%)
Query: 157 ELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI------- 209
E++ + KG EK PIQ+ + A+ G D++ RA+ GTGKT AF IP ++KI
Sbjct: 114 EIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKH 173
Query: 210 DHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLL 269
N + ++L PTRELA Q + +E L + GGT + + +L V +
Sbjct: 174 GRGRNPL-CLVLAPTRELARQVEKEFRESAPSL--DTICLYGGTPIGQQMRQLDYGVDVA 230
Query: 270 VGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSAT 329
VGTPGR++DL K+G L + +V+DEAD++L F +E +++ L RQ +M+SAT
Sbjct: 231 VGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMFSAT 290
Query: 330 YPVTVKDFKERYLRKPYVINLM---DELTLKGITQFYAFVEERQKVHCLNTLFSK-LQIN 385
P ++ ++YL P ++L+ D+ GIT + + + + L ++ +
Sbjct: 291 MPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTEHAKGG 350
Query: 386 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 445
+ I+F + + L+ + + C +H + Q R R FR+G LV TD+
Sbjct: 351 KCIVFTQTKRDADRLSYALAR-SFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAA 409
Query: 446 RGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGT 505
RG+D+ V+++I+++ P N ET++HR GR+GR G G A+ + + + + IE+E+G+
Sbjct: 410 RGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGS 469
Query: 506 EIKQIP 511
++P
Sbjct: 470 RFTELP 475
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 179/337 (53%), Gaps = 12/337 (3%)
Query: 167 FEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQV------VI 220
+EKP PIQ +++PI ++G D + AK G+GKT F +P L I D ++ ++
Sbjct: 549 YEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHI-KDQPPVEAGDGPIGLV 607
Query: 221 LVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL- 279
+ PTREL Q ++ K L I+ + GG+ + I L + ++V TPGR++D+
Sbjct: 608 MAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 667
Query: 280 --AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDF 337
+ + L+ + LVMDEAD++ F+P I ++IQ + P RQ +++SAT+P V+
Sbjct: 668 CTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETL 727
Query: 338 KERYLRKPYVINLMDELTL-KGITQFYAFVEERQK-VHCLNTLFSKLQINQSIIFCNSVN 395
+ L KP I + + K ITQ E + + L L + + ++F S
Sbjct: 728 ARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQE 787
Query: 396 RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNV 455
+ + L + + + Y C +H Q R DF+N C L+ T + RG+D++ + +
Sbjct: 788 KCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELEL 847
Query: 456 VINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
V+NFD P + E Y+HRVGR+GR G G AV I+ +D
Sbjct: 848 VVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDD 884
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 179/337 (53%), Gaps = 12/337 (3%)
Query: 167 FEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQV------VI 220
+EKP PIQ +++PI ++G D + AK G+GKT F +P L I D ++ ++
Sbjct: 211 YEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHI-KDQPPVEAGDGPIGLV 269
Query: 221 LVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL- 279
+ PTREL Q ++ K L I+ + GG+ + I L + ++V TPGR++D+
Sbjct: 270 MAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 329
Query: 280 --AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDF 337
+ + L+ + LVMDEAD++ F+P I ++IQ + P RQ +++SAT+P V+
Sbjct: 330 CTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETL 389
Query: 338 KERYLRKPYVINLMDELTL-KGITQFYAFVEERQK-VHCLNTLFSKLQINQSIIFCNSVN 395
+ L KP I + + K ITQ E + + L L + + ++F S
Sbjct: 390 ARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQE 449
Query: 396 RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNV 455
+ + L + + + Y C +H Q R DF+N C L+ T + RG+D++ + +
Sbjct: 450 KCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELEL 509
Query: 456 VINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
V+NFD P + E Y+HRVGR+GR G G AV I+ +D
Sbjct: 510 VVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDD 546
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 192/352 (54%), Gaps = 10/352 (2%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FE L + I +KG++ P+PIQ +++P+ L+G D++A A+ G+GKTAAF IP LEK
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 209 IDHD--NNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 266
+ ++ +IL PTR+LA QT + KELGK ++V + GG S++D L +
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149
Query: 267 HLLVGTPGRILD-LAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
+++ TPGR++ L++ L+ +V DEAD L F + Q++ LS NRQ L+
Sbjct: 150 DVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLL 209
Query: 326 YSATYPVTVKDFKERYLRKPYVINLMDELTLK-GITQFYAFVEERQKVHCLNTLFSK--L 382
+SAT P + +F + LR+P ++ L E + + + V +K L L +
Sbjct: 210 FSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEKYSALLYLVREHIS 269
Query: 383 QINQSIIFCNSVNRVELLAK--KITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 440
Q++IF ++ + VE + K+ + S Y M QD R FR L+
Sbjct: 270 SDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCY--GDMDQDARKIHVSRFRARKTMLLIV 327
Query: 441 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
TD+ RGIDI ++ VIN+DFP + ++HRVGR+ R G G A + +T ED
Sbjct: 328 TDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPED 379
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 210/417 (50%), Gaps = 22/417 (5%)
Query: 106 EVEKTVQSESADPSSQDWKARLKIPPPDTRYQTEDVTATKGNEFEDYFLKRELLMGIYEK 165
E +K + S D + ++K P P + T D + + F + L R LL
Sbjct: 128 ETDKQEEYLSEDDEAAEYKPEDATPKP--FFSTVDGVSFHADTFMELNLSRPLLRACETL 185
Query: 166 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVI---QVVILV 222
G++KP+PIQ IP+ALTG D+ A A G+GKTAAF +P LE++ + +V+IL
Sbjct: 186 GYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILT 245
Query: 223 PTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKK 282
PTRELA+Q + + L + I+ + GG S+++ + L ++V TPGR++D +
Sbjct: 246 PTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRN 305
Query: 283 GVCI-LKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERY 341
+ + L D ++L++DEAD+LL F I +L++ RQ +++SAT VK+ +
Sbjct: 306 SMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKELVKLS 365
Query: 342 LRKPYVINLMDELTLK--GITQFYAFVEERQKVH--------CLNTLFSKLQINQSIIFC 391
L KP ++ D + G+T+ + ++ + C T SK+ IIF
Sbjct: 366 LNKPLRLS-ADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKV-----IIFS 419
Query: 392 NSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQ 451
+ L G +H + Q R FR L+ TD+ RG+DI
Sbjct: 420 GTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDII 479
Query: 452 AVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIK 508
V VIN+ P+ ++Y+HRVGR+ R G G AV +T DR L I +++G+++K
Sbjct: 480 GVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLK 536
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 201/382 (52%), Gaps = 31/382 (8%)
Query: 162 IYEKGFEKPSPIQ--EESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDH-----DNN 214
I +G + P P++ EE+IP+ L D++ + G+GKTAAF +P L I + N
Sbjct: 215 ISYRGSKIPHPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREEN 274
Query: 215 VIQ---VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVG 271
+ +++VPTRELA Q + + ++L + + TG S++ ++L Q +++
Sbjct: 275 QTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIA 334
Query: 272 TPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPN----------- 320
TPGR+LD ++ +L C+ LV+DEAD+++ +F+P + +++ + +
Sbjct: 335 TPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEEL 394
Query: 321 ------RQILMYSATYPVTVKDFKERYLRKPYVINLMDELTLKGITQFYAFVEERQKVHC 374
R M+SAT ++V+ ++LR P V+ + + T K ITQ +E K
Sbjct: 395 EEKKIYRTTYMFSATMLLSVERLARKFLRNPVVVTIGE--TTKFITQQVIMTKESDKFSR 452
Query: 375 LNTLFSKLQINQS-IIFCNSVNRVELLAKKITELGY-SCFYIHAKMLQDHRNRVFHDFRN 432
L L L +++ I+F N+ N+V+ + K + ++G +HA Q+ R+ +F+
Sbjct: 453 LKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKK 512
Query: 433 GACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
LV TD+ RG+DI + VIN+D P + Y HR+GR+GR G G+A +T ED
Sbjct: 513 KRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLED 572
Query: 493 RFNLYRIEQELGTEIKQIPPHI 514
+ Y ++Q+L +PP +
Sbjct: 573 KDVFYGLKQKLNECNSLVPPEL 594
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 207/392 (52%), Gaps = 21/392 (5%)
Query: 140 DVTATKGNEFEDYFLKRELLMGIY-EKGFEKPSPIQEESIPIALT--GSDILARAKNGTG 196
D T + FED L EL+ G+Y E FEKPS IQ S+P+ +T ++A+A NG+G
Sbjct: 84 DTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSG 143
Query: 197 KTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 256
KT F + L ++D Q + + PTRELA Q +V +++GK I + ++
Sbjct: 144 KTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRG 203
Query: 257 DDIMRLYQPV--HLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPE-FQPS---I 310
PV H+++GTPG + L +LV DEAD +L+ + F+ I
Sbjct: 204 APAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKI 263
Query: 311 EQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLM-DELTLKGITQFYAFV-EE 368
+ I ++PN Q+L++SAT+ TVKDF R ++ P + + ++L L + Q+ +E
Sbjct: 264 MKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALDSVKQYKVVCPKE 323
Query: 369 RQKVHCLNTLFSKL-QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 427
+ K+ + +L I Q+IIF + + + K + E+GY +H + + R+++
Sbjct: 324 QNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIV 383
Query: 428 HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAET-------YLHRVGRSGRYGH 480
+F+ + L+ TD+ RG D Q VN+V+N++ P ET YLHRVGR+GR+G
Sbjct: 384 KEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRAGRFGR 443
Query: 481 LGLAVNLITYE--DRFNLYRIEQELGTEIKQI 510
G NL+ + D+ + +IE+ +K+I
Sbjct: 444 KGAVFNLLLDDGWDKEVMEKIEKYFEANVKEI 475
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 205/425 (48%), Gaps = 43/425 (10%)
Query: 90 WLRR---TQLGGNDTNV---VEEVEKTVQSESADPSSQDWKARLKIPPPDTRYQTEDVTA 143
W RR T GND N V E E TV + A + +PPP
Sbjct: 96 WDRRDTETNPFGNDGNADPAVNEQENTVINFEAYEDIPIETSGDNVPPPV---------- 145
Query: 144 TKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCI 203
N F + L L + I + KP+P+Q +IPI G D++A A+ G+GKTAAFC
Sbjct: 146 ---NTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCF 202
Query: 204 PALEKIDHDNNVIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGT 253
P + I D ++ + VIL PTRELA Q ++ ++V+V GGT
Sbjct: 203 PIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGT 262
Query: 254 SLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQL 313
+ I L + V +LV TPGR+ DL ++G L+ L +DEAD++L F+P I ++
Sbjct: 263 PVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKI 322
Query: 314 IQFLS---PN-RQILMYSATYPVTVKDFKERYLRKPYVINLMDEL--TLKGITQFYAFVE 367
+Q + P RQ +++SAT+P ++ +L Y+ + + + I Q FV
Sbjct: 323 VQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSN-YIFLAVGRVGSSTDLIVQRVEFVH 381
Query: 368 ERQK-VHCLNTLFSKLQ-INQ-----SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQ 420
+ K H ++ L ++ + NQ +++F + + L + G+ IH Q
Sbjct: 382 DSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQ 441
Query: 421 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGH 480
R F+ G LV TD+ RG+DI V V+NFD P + + Y+HR+GR+GR G+
Sbjct: 442 QEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGN 501
Query: 481 LGLAV 485
GLA
Sbjct: 502 SGLAT 506
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 206/392 (52%), Gaps = 25/392 (6%)
Query: 140 DVTATKGNEF--EDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGK 197
+V A G E L + L + ++G PIQ + AL G DI+ARAK GTGK
Sbjct: 93 NVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 152
Query: 198 TAAFCIPALEKIDHD----------NNVIQVVILVPTRELALQTSQVCKELGKHLKIQVM 247
T AF IP ++++ + + + ++L PTRELA Q + KE +L +
Sbjct: 153 TLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYL--STV 210
Query: 248 VTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQ 307
GG S L + V ++VGTPGRI+DL + L + LV+DEAD++L+ F+
Sbjct: 211 CVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFE 270
Query: 308 PSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLM---DELTLKGITQFYA 364
++E +++ L RQ +++SAT P VK +YL P I+L+ DE +GI + YA
Sbjct: 271 EAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGI-KLYA 329
Query: 365 FV----EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQ 420
+R + L T+++K ++I+F + + ++ ++ + +H + Q
Sbjct: 330 IATTSTSKRTILSDLITVYAK--GGKTIVFTQTKRDADEVSLALSN-SIATEALHGDISQ 386
Query: 421 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGH 480
R R + FR G LV TD+ +RG+DI V++VI+++ P + ET++HR GR+GR G
Sbjct: 387 HQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGK 446
Query: 481 LGLAVNLITYEDRFNLYRIEQELGTEIKQIPP 512
G A+ + T + + +E+++G + I P
Sbjct: 447 EGSAILMHTSSQKRTVRSLERDVGCHFEFISP 478
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 206/392 (52%), Gaps = 25/392 (6%)
Query: 140 DVTATKGNEF--EDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGK 197
+V A G E L + L + ++G PIQ + AL G DI+ARAK GTGK
Sbjct: 93 NVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 152
Query: 198 TAAFCIPALEKIDHD----------NNVIQVVILVPTRELALQTSQVCKELGKHLKIQVM 247
T AF IP ++++ + + + ++L PTRELA Q + KE +L +
Sbjct: 153 TLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYL--STV 210
Query: 248 VTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQ 307
GG S L + V ++VGTPGRI+DL + L + LV+DEAD++L+ F+
Sbjct: 211 CVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFE 270
Query: 308 PSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLM---DELTLKGITQFYA 364
++E +++ L RQ +++SAT P VK +YL P I+L+ DE +GI + YA
Sbjct: 271 EAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGI-KLYA 329
Query: 365 FV----EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQ 420
+R + L T+++K ++I+F + + ++ ++ + +H + Q
Sbjct: 330 IATTSTSKRTILSDLITVYAK--GGKTIVFTQTKRDADEVSLALSN-SIATEALHGDISQ 386
Query: 421 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGH 480
R R + FR G LV TD+ +RG+DI V++VI+++ P + ET++HR GR+GR G
Sbjct: 387 HQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGK 446
Query: 481 LGLAVNLITYEDRFNLYRIEQELGTEIKQIPP 512
G A+ + T + + +E+++G + I P
Sbjct: 447 EGSAILMHTSSQKRTVRSLERDVGCHFEFISP 478
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 185/342 (54%), Gaps = 18/342 (5%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F+ L + + I E GF+ + IQ SI L G D+L A+ G+GKT AF IPA+E
Sbjct: 91 FDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVEL 150
Query: 209 IDHDN----NVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 264
+ + N V+++ PTRELA+QT V +EL KH V + GG + + + R+
Sbjct: 151 LFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIAS 210
Query: 265 PVHLLVGTPGRILD-LAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQI 323
+L++ TPGR+LD L I K LV+DEAD++L F+ + ++++ L RQ
Sbjct: 211 GSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQT 270
Query: 324 LMYSATYPVTVKDFKERYLRKPYVINLMD---ELTLKGITQFYAFVEERQKVHCLNTLFS 380
++SAT VKD L P +++ D ++T +G+ Q Y V +Q++ L + F
Sbjct: 271 ALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLIS-FL 329
Query: 381 KLQINQSIIF----CNSVN-RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 435
K +N+ I+ C SV E++ KI+++ S IH M Q+ R + F DF
Sbjct: 330 KKNLNKKIMVFFSTCKSVQFHTEIM--KISDVDVS--DIHGGMDQNRRTKTFFDFMKAKK 385
Query: 436 RNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
L+CTD+ RG+DI +V+ +I +D P Y+HRVGR+ R
Sbjct: 386 GILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTAR 427
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 194/386 (50%), Gaps = 25/386 (6%)
Query: 147 NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
N F + L L + I + KP+P+Q +IPI L G D++A A+ G+GKTAAFC P +
Sbjct: 159 NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPII 218
Query: 207 EKIDHDNNVIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 256
I D +V + VIL PTRELA Q K+ ++V+V GGT +
Sbjct: 219 SGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPIN 278
Query: 257 DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQF 316
+ L + V +LV TPGR+ DL ++ ++ L +DEAD++L F+P I ++++
Sbjct: 279 QQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 338
Query: 317 LS--PN--RQILMYSATYPVTVKDFKERYLRKPYVINLMDEL--TLKGITQFYAFV-EER 369
+ P RQ L++SAT+P ++ +L Y+ + + + I Q FV +
Sbjct: 339 MDMPPRGVRQTLLFSATFPREIQRLAADFLAN-YIFLAVGRVGSSTDLIVQRVEFVLDSD 397
Query: 370 QKVHCLNTLFSK----LQINQS--IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 423
++ H ++ L ++ +Q Q+ ++F + + L + G+ IH Q R
Sbjct: 398 KRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQER 457
Query: 424 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGL 483
F++G LV TD+ RG+DI V V+NFD P + + Y+HR+GR+GR G GL
Sbjct: 458 EVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 517
Query: 484 AVNLITYEDRFNLYRIEQELGTEIKQ 509
A + +L R EL E Q
Sbjct: 518 ATAFFN-DGNTSLARPLAELMQEANQ 542
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 190/387 (49%), Gaps = 23/387 (5%)
Query: 147 NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
N F D L L + I + +P+P+Q +IPI L D++A A+ G+GKTAAFC P +
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 207 EKIDHDNNVIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 256
I D +V + VIL PTRELA Q K+ ++V+V GGT +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 257 DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQF 316
+ L + +LV TPGR+ DL ++ ++ L +DEAD++L F+P I ++++
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 330
Query: 317 LS--PN--RQILMYSATYPVTVKDFKERYLRKPYVINLMDEL--TLKGITQFYAFVEERQ 370
+ P RQ +++SAT+P ++ ++ Y+ + + + ITQ FV+E
Sbjct: 331 MDMPPRGVRQTMLFSATFPSQIQRLAADFMSN-YIFLAVGRVGSSTDLITQRVEFVQESD 389
Query: 371 K-VHCLNTLFSKLQINQ----SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 425
K H ++ L ++ + +++F + + L + + IH Q R
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREV 449
Query: 426 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAV 485
F+ G LV TD+ RG+DI V V+NFD P + + Y+HR+GR+GR G G+A
Sbjct: 450 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIAT 509
Query: 486 NLITYEDRFNLYRIEQELGTEIKQIPP 512
E+ L R EL E Q P
Sbjct: 510 AFFN-ENNAQLARSLAELMQEANQEVP 535
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 190/387 (49%), Gaps = 23/387 (5%)
Query: 147 NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
N F D L L + I + +P+P+Q +IPI L D++A A+ G+GKTAAFC P +
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 207 EKIDHDNNVIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 256
I D +V + VIL PTRELA Q K+ ++V+V GGT +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 257 DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQF 316
+ L + +LV TPGR+ DL ++ ++ L +DEAD++L F+P I ++++
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 330
Query: 317 LS--PN--RQILMYSATYPVTVKDFKERYLRKPYVINLMDEL--TLKGITQFYAFVEERQ 370
+ P RQ +++SAT+P ++ ++ Y+ + + + ITQ FV+E
Sbjct: 331 MDMPPRGVRQTMLFSATFPSQIQRLAADFMSN-YIFLAVGRVGSSTDLITQRVEFVQESD 389
Query: 371 K-VHCLNTLFSKLQINQ----SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 425
K H ++ L ++ + +++F + + L + + IH Q R
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREV 449
Query: 426 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAV 485
F+ G LV TD+ RG+DI V V+NFD P + + Y+HR+GR+GR G G+A
Sbjct: 450 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIAT 509
Query: 486 NLITYEDRFNLYRIEQELGTEIKQIPP 512
E+ L R EL E Q P
Sbjct: 510 AFFN-ENNAQLARSLAELMQEANQEVP 535
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 190/387 (49%), Gaps = 23/387 (5%)
Query: 147 NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
N F D L L + I + +P+P+Q +IPI L D++A A+ G+GKTAAFC P +
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 207 EKIDHDNNVIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 256
I D +V + VIL PTRELA Q K+ ++V+V GGT +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 257 DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQF 316
+ L + +LV TPGR+ DL ++ ++ L +DEAD++L F+P I ++++
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 330
Query: 317 LS--PN--RQILMYSATYPVTVKDFKERYLRKPYVINLMDEL--TLKGITQFYAFVEERQ 370
+ P RQ +++SAT+P ++ ++ Y+ + + + ITQ FV+E
Sbjct: 331 MDMPPRGVRQTMLFSATFPSQIQRLAADFMSN-YIFLAVGRVGSSTDLITQRVEFVQESD 389
Query: 371 K-VHCLNTLFSKLQINQ----SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 425
K H ++ L ++ + +++F + + L + + IH Q R
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREV 449
Query: 426 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAV 485
F+ G LV TD+ RG+DI V V+NFD P + + Y+HR+GR+GR G G+A
Sbjct: 450 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIAT 509
Query: 486 NLITYEDRFNLYRIEQELGTEIKQIPP 512
E+ L R EL E Q P
Sbjct: 510 AFFN-ENNAQLARSLAELMQEANQEVP 535
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 195/386 (50%), Gaps = 23/386 (5%)
Query: 131 PPDTRYQTEDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILAR 190
P +T D +K F+ + L L I + GFE + +QE ++PI L G D+LA+
Sbjct: 367 PTGEHVKTSDSYLSK-TRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAK 425
Query: 191 AKNGTGKTAAFCIPALEKI--------DHDNNVIQVVILVPTRELALQTSQVCKELGK-H 241
AK GTGKT AF +PA+E + D I V+++ PTRELA Q + L K H
Sbjct: 426 AKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYH 485
Query: 242 LKIQVMVTTGGTSLKDDIMRLY-QPVHLLVGTPGRILDLAKKGVCI---LKDCSMLVMDE 297
I V V GGT L + R+ P +LV TPGR+ D + L +LV+DE
Sbjct: 486 PSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDE 545
Query: 298 ADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPY-VINLMDEL-- 354
AD LL F+ IE++I + RQ ++SAT P V+ L++ + IN + E
Sbjct: 546 ADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSG 605
Query: 355 -TLKGITQFYAFVEERQKVHCLNTLFSKLQIN----QSIIFCNSVNRVELLAKKITELGY 409
T + +TQ Y + L+ L + + + IIFC + L+A +++L
Sbjct: 606 ETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSL 665
Query: 410 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYL 469
+ IH++ Q +R RV +FR LV +D+ RG+D V++V+ P + E Y+
Sbjct: 666 NVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYI 725
Query: 470 HRVGRSGRYGHLGLAVNLIT-YEDRF 494
HR+GR+GR G G V L+ +E+ F
Sbjct: 726 HRLGRTGRKGKEGEGVLLLAPWEEYF 751
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 190/376 (50%), Gaps = 11/376 (2%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL-- 206
FED +++ I ++ +EKP+ IQ +++PI L+G D++ AK G+GKTAAF +P +
Sbjct: 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 289
Query: 207 ----EKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRL 262
++ D I V I PTRELA Q K+ K ++V GG S + L
Sbjct: 290 IMDQPELQRDEGPIGV-ICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKEL 348
Query: 263 YQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQ 322
++V TPGR++D+ K + S LV+DEAD++ F+P + ++ + P+RQ
Sbjct: 349 KAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQ 408
Query: 323 ILMYSATYPVTVKDFKERYLRKPYVINLMD-ELTLKGITQFYAFV-EERQKV-HCLNTLF 379
L++SAT P V+ L P + + + + + ITQ + + +K+ L L
Sbjct: 409 TLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLP 468
Query: 380 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 439
+ ++F + V+ + ++T + +H Q R F++G L+
Sbjct: 469 GMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLI 528
Query: 440 CTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHL-GLAVNLITYEDRFNLYR 498
TD+ RG+DI+++ V+N+D K+ + ++HR+GR+GR G G+A L+T +
Sbjct: 529 ATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGE 588
Query: 499 IEQELGTEIKQIPPHI 514
+ L + +PP +
Sbjct: 589 LVNSLVAAGQNVPPEL 604
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 190/349 (54%), Gaps = 23/349 (6%)
Query: 181 ALTGSDILARAKNGTGKTAAFCIPALEKIDHD----------NNVIQVVILVPTRELALQ 230
AL G DI+ARAK GTGKT AF IP ++++ + + + ++L PTRELA Q
Sbjct: 43 ALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQ 102
Query: 231 TSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDC 290
+ KE +L + GG S L + V ++VGTPGRI+DL + L +
Sbjct: 103 VEKEIKESAPYL--STVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEV 160
Query: 291 SMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINL 350
LV+DEAD++L+ F+ ++E +++ L RQ +++SAT P VK +YL P I+L
Sbjct: 161 EYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDL 220
Query: 351 M---DELTLKGITQFYAFV----EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKK 403
+ DE +GI + YA +R + L T+++K ++I+F + + ++
Sbjct: 221 VGDQDEKLAEGI-KLYAIATTSTSKRTILSDLITVYAK--GGKTIVFTQTKRDADEVSLA 277
Query: 404 ITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK 463
++ + +H + Q R R + FR G LV TD+ +RG+DI V++VI+++ P
Sbjct: 278 LSN-SIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 336
Query: 464 NAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPP 512
+ ET++HR GR+GR G G A+ + T + + +E+++G + I P
Sbjct: 337 DPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISP 385
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 191/368 (51%), Gaps = 22/368 (5%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F+ Y L L I + G+E + +QE ++PI L G D+LA+AK GTGKT AF +P++E
Sbjct: 322 FDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEV 381
Query: 209 I--------DHDNNVIQVVILVPTRELALQTSQVCKELGK-HLKIQVMVTTGGTSLKDDI 259
+ D+ I +++ PTRELA Q + L K H I V V GGT L +
Sbjct: 382 VVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQ 441
Query: 260 MRLY-QPVHLLVGTPGRILDLAKKG---VCILKDCSMLVMDEADKLLSPEFQPSIEQLIQ 315
R+ P +LV TPGR+ D + LK +LV+DEAD LL F+ IE++I
Sbjct: 442 KRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIIS 501
Query: 316 FLSPNRQILMYSATYPVTVKDFKERYLRKPY-VINLMDELTLKG---ITQFYAFVEERQK 371
+ RQ ++SAT P V+ LR+ + +N + E T++ + Q + +
Sbjct: 502 AVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRH 561
Query: 372 VHCLNTLFSKLQIN----QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 427
L TL + + + I+FC + +L+A + EL + IH++ Q +R RV
Sbjct: 562 FSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVS 621
Query: 428 HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNL 487
++FR LV +D+ RG+D V +V+ PK+ E Y+HR+GR+GR G G + L
Sbjct: 622 NEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILL 681
Query: 488 IT-YEDRF 494
+ +E+ F
Sbjct: 682 LAPWEEYF 689
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 180/351 (51%), Gaps = 10/351 (2%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FE L I E GF + + IQ ++IP + G D+L A+ G+GKT AF IPA+E
Sbjct: 156 FESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVEL 215
Query: 209 IDH----DNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 264
+ N V+++ PTRELA+Q+ V KEL K+ V GG K + L +
Sbjct: 216 LYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILAK 275
Query: 265 PVHLLVGTPGRILD-LAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQI 323
V+LLV TPGR+LD L I K+ LVMDEAD++L F+ +++++ L RQ
Sbjct: 276 GVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQT 335
Query: 324 LMYSATYPVTVKDFKERYLRKPYVINLMD---ELTLKGITQFYAFVEERQKVHCLNTLFS 380
++SAT V+D L P I++ + E+T +G+ Q Y V ++ L T
Sbjct: 336 SLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLK 395
Query: 381 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 439
+ Q + I +F ++ + A+ + + C I + Q+ R F F L+
Sbjct: 396 RFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILL 455
Query: 440 CTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR-YGHLGLAVNLIT 489
CT++ RG+D V+ ++ +D P N Y+HRVGR+ R G G A+ ++T
Sbjct: 456 CTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLT 506
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 204/403 (50%), Gaps = 23/403 (5%)
Query: 137 QTEDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTG 196
+T D +K F+ + L L GI + GF+ + +QE ++P+ L G DILA+AK GTG
Sbjct: 71 KTSDSYLSK-TRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTG 129
Query: 197 KTAAFCIPALEKI--------DHDNNVIQVVILVPTRELALQTSQVCKELGK-HLKIQVM 247
KT AF +P++E + D+ + I V+++ PTRELA Q + L K H I V
Sbjct: 130 KTVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQ 189
Query: 248 VTTGGTSLKDDIMRLYQ-PVHLLVGTPGRI---LDLAKKGVCILKDCSMLVMDEADKLLS 303
V GGT L + RL + P +LV TPGR+ +D L +LV+DEAD LL
Sbjct: 190 VVIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLD 249
Query: 304 PEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPY-VINLMDE---LTLKGI 359
F+ IE++I + RQ ++SAT V+ L++ + +N + E T + +
Sbjct: 250 MGFRREIERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKV 309
Query: 360 TQFYAFVEERQKVHCLNTLFSKLQIN----QSIIFCNSVNRVELLAKKITELGYSCFYIH 415
+Q Y + L L K + + IIFC + L+A + +L + IH
Sbjct: 310 SQMYMIASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIH 369
Query: 416 AKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRS 475
++ Q +R RV +FR LV +D+ RG+D V++V+ P + E Y+HR+GR+
Sbjct: 370 SRKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRT 429
Query: 476 GRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 518
GR G G V L+ + + L + ++L +PP +A+
Sbjct: 430 GRKGKEGEGVLLLAPWEEYFLSSV-KDLPITKSSLPPIDHEAV 471
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 184/362 (50%), Gaps = 16/362 (4%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F L +LL+ + G++ P+PIQ ++IP ALTG +LA A G+GKTA+F +P + +
Sbjct: 112 FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISR 171
Query: 209 I---------DHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDI 259
D N + +V L PTREL +Q K LGK L + + GG + +
Sbjct: 172 CTTYHSEHPSDQRRNPLAMV-LAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 260 MRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSP 319
R+ Q V L++GTPGR++DL K L + V+DE D +L F+ + Q+ Q LS
Sbjct: 231 YRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALS- 289
Query: 320 NRQILMYSATYPVTVKDFKERYLRKPYVINLMD-ELTLKGITQFYAFVEERQKVHCL-NT 377
Q+L++SAT V+ ++ ++++ + K + Q +V+ +QK L +
Sbjct: 290 QPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDI 349
Query: 378 LFSKLQIN-QSIIFCNSVNRVELLAKKITEL-GYSCFYIHAKMLQDHRNRVFHDFRNGAC 435
L S+ ++++ +S +LLA IT + G IH + R V F G
Sbjct: 350 LRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEV 409
Query: 436 RNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFN 495
LV T + RG+D+ V VI FD P + Y+H +GR+ R G G A+ + +DR N
Sbjct: 410 PVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDR-N 468
Query: 496 LY 497
L+
Sbjct: 469 LF 470
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 184/362 (50%), Gaps = 16/362 (4%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F L +LL+ + G++ P+PIQ ++IP ALTG +LA A G+GKTA+F +P + +
Sbjct: 112 FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISR 171
Query: 209 I---------DHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDI 259
D N + +V L PTREL +Q K LGK L + + GG + +
Sbjct: 172 CTTYHSEHPSDQRRNPLAMV-LAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 260 MRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSP 319
R+ Q V L++GTPGR++DL K L + V+DE D +L F+ + Q+ Q LS
Sbjct: 231 YRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALS- 289
Query: 320 NRQILMYSATYPVTVKDFKERYLRKPYVINLMD-ELTLKGITQFYAFVEERQKVHCL-NT 377
Q+L++SAT V+ ++ ++++ + K + Q +V+ +QK L +
Sbjct: 290 QPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDI 349
Query: 378 LFSKLQIN-QSIIFCNSVNRVELLAKKITEL-GYSCFYIHAKMLQDHRNRVFHDFRNGAC 435
L S+ ++++ +S +LLA IT + G IH + R V F G
Sbjct: 350 LRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEV 409
Query: 436 RNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFN 495
LV T + RG+D+ V VI FD P + Y+H +GR+ R G G A+ + +DR N
Sbjct: 410 PVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDR-N 468
Query: 496 LY 497
L+
Sbjct: 469 LF 470
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 175/336 (52%), Gaps = 39/336 (11%)
Query: 167 FEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQV------VI 220
+EKP PIQ +++PI ++G D + AK G+GKT F +P L I D ++ ++
Sbjct: 416 YEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHI-KDQPPVEAGDGPIGLV 474
Query: 221 LVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL- 279
+ PTREL Q ++ K L I + GG+ + I L + ++V TPGR++D+
Sbjct: 475 MAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 534
Query: 280 --AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDF 337
+ + L+ + LVMDEAD++ F+P I +++Q + P+RQ +++SAT+P V+
Sbjct: 535 CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETL 594
Query: 338 KERYLRKPYVINLMDELTL-KGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNR 396
+ L KP I + + K ITQ E ++ FS+L
Sbjct: 595 ARKVLNKPVEIQVGGRSVVNKDITQLVEIRPESER-------FSRL-------------- 633
Query: 397 VELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVV 456
+ELL + E G ++ ++ + DF++ C L+ T + RG+D++ + +V
Sbjct: 634 LELLGE-WYEKGKVLVFVRSQ------EKSISDFKSDVCNLLIATSVAARGLDVKELELV 686
Query: 457 INFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
+NFD P + E Y+HRVGR+GR G G AV I+ +D
Sbjct: 687 VNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDD 722
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 185/380 (48%), Gaps = 17/380 (4%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F+D R +L + EKG +P+PIQ + +P+ L G D++ A G+GKT F +P +
Sbjct: 148 FKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMI 207
Query: 209 IDHDNNVIQV--------VILVPTRELALQTSQVCKELGKHL------KIQVMVTTGGTS 254
+ ++ + +I+ P+RELA QT +V ++ L ++ ++ GG
Sbjct: 208 ALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGID 267
Query: 255 LKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLI 314
++ + + + VH++V TPGR+ D+ K L C L +DEAD+L+ F+ I ++
Sbjct: 268 MRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVF 327
Query: 315 QFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDELTLK-GITQFYAFVEERQKVH 373
RQ L++SAT P ++ F L KP +N+ + Q +V++ K+
Sbjct: 328 DHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIV 387
Query: 374 CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 433
L K +IFC + V+ + + + G IH Q+ R F+ G
Sbjct: 388 YLLECLQKTS-PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAG 446
Query: 434 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITY-ED 492
LV TD+ ++G+D + VIN+D P E Y+HR+GR+GR G G+A I +
Sbjct: 447 KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQS 506
Query: 493 RFNLYRIEQELGTEIKQIPP 512
L ++ L ++IPP
Sbjct: 507 ETTLLDLKHLLQEAKQRIPP 526
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 172/329 (52%), Gaps = 17/329 (5%)
Query: 136 YQTEDVTATKGNE-------FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDIL 188
Y+TE + +G + F+D +L I + GF +P+PIQ + P+AL G D++
Sbjct: 147 YRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLI 206
Query: 189 ARAKNGTGKTAAFCIPAL------EKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHL 242
A+ G+GKT A+ +PAL ++ D+ I V+IL PTRELA+Q + ++ G
Sbjct: 207 GIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPI-VLILAPTRELAVQIQEESRKFGLRS 265
Query: 243 KIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLL 302
++ GG I L + V +++ TPGR++D+ + LK + LV+DEAD++L
Sbjct: 266 GVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRML 325
Query: 303 SPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPY--VINLMDELTLKGIT 360
F+P I +++ + P+RQ L++SAT+P V+ ++LR PY +I D + I
Sbjct: 326 DMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSIN 385
Query: 361 QFYAFVEERQKVHCLNTLFSKLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKML 419
Q V +K + L TL +L I IF + + + +++ G+ IH
Sbjct: 386 QVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKT 445
Query: 420 QDHRNRVFHDFRNGACRNLVCTDLFTRGI 448
Q R+RV +F++G + TD+ RG+
Sbjct: 446 QSERDRVLAEFKSGRSPIMTATDVAARGL 474
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 186/382 (48%), Gaps = 21/382 (5%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP---- 204
F D LL + +KG P+PIQ + +P+ L+G D++ A G+GKT F +P
Sbjct: 99 FMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIIL 158
Query: 205 ALEK-----IDHDNNVIQVVILVPTRELALQTSQVCKELGKHL------KIQVMVTTGGT 253
AL++ I I +VI P+RELA QT V ++ L +++ ++ GG
Sbjct: 159 ALQEEIMMPIAAGEGPIALVI-CPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGV 217
Query: 254 SLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQL 313
++ + + + VH++V TPGR+ D+ K L C +L +DEAD+L+ F+ I +
Sbjct: 218 DMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHV 277
Query: 314 IQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINL--MDELTLKGITQFYAFVEERQK 371
RQ L++SAT P ++ F L KP +N+ L I + +E +
Sbjct: 278 FDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKI 337
Query: 372 VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFR 431
V+ L L + +IFC + V+ + + + G IH Q+ R+ F+
Sbjct: 338 VYLLECL--QKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFK 395
Query: 432 NGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITY- 490
G LV TD+ ++G+D + VIN+D P E Y+HR+GR+GR G G+A I
Sbjct: 396 AGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKN 455
Query: 491 EDRFNLYRIEQELGTEIKQIPP 512
+ L ++ L ++IPP
Sbjct: 456 QSEITLLDLKHLLQEAKQRIPP 477
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 169/335 (50%), Gaps = 16/335 (4%)
Query: 176 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKI---------DHDNNVIQVVILVPTRE 226
++IP ALTG +LA A G+GKTA+F +P + + D N + +V L PTRE
Sbjct: 2 QAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMV-LAPTRE 60
Query: 227 LALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCI 286
L +Q K LGK L + + GG + + R+ Q V L++GTPGR++DL K
Sbjct: 61 LCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIE 120
Query: 287 LKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPY 346
L + V+DE D +L F+ + Q+ Q LS Q+L++SAT V+ ++
Sbjct: 121 LDNIMTFVLDEVDCMLQRGFRDQVMQIFQALS-QPQVLLFSATISREVEKVGGSLAKEII 179
Query: 347 VINLMD-ELTLKGITQFYAFVEERQKVHCL-NTLFSKLQIN-QSIIFCNSVNRVELLAKK 403
++++ + K + Q +V+ +QK L + L S+ ++++ +S +LLA
Sbjct: 180 LVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANA 239
Query: 404 ITEL-GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP 462
IT + G IH + R V F G LV T + RG+D+ V VI FD P
Sbjct: 240 ITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMP 299
Query: 463 KNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLY 497
+ Y+H +GR+ R G G A+ + +DR NL+
Sbjct: 300 STIKEYIHVIGRASRMGEKGTAIVFVNEDDR-NLF 333
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 175/362 (48%), Gaps = 8/362 (2%)
Query: 158 LLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDH-DNNVI 216
+L + E GF++P+PIQ ++IPI L+G + A A G+GKT AF P L K+ + I
Sbjct: 152 ILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLKRPSTDGI 211
Query: 217 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 276
+ VIL P RELA QT++ K+L K + + T D +L+ +L+ TP R+
Sbjct: 212 RAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLW--CDVLISTPMRL 269
Query: 277 LDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQIL--MYSATYPVTV 334
K L LV+DE+DKL I+ +++ S N I+ ++SAT P +V
Sbjct: 270 KRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACS-NPSIIRSLFSATLPDSV 328
Query: 335 KDFKERYLRKPY-VINLMDELTLKGITQFYAFV-EERQKVHCLNTLFSKLQINQSIIFCN 392
++ + VI + + Q F E K+ L F++ +IF
Sbjct: 329 EELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQ 388
Query: 393 SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQA 452
S R + L ++ IH+ + R FR G L+ TD+ RG+D +
Sbjct: 389 SKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKG 448
Query: 453 VNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPP 512
+N VIN+DFP +A Y+HR+GRSGR G G A+ T +D L I + + ++P
Sbjct: 449 INCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSGCEVPS 508
Query: 513 HI 514
I
Sbjct: 509 WI 510
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 202/447 (45%), Gaps = 38/447 (8%)
Query: 94 TQLGGNDTNVVEEVEKTVQSESADPS------SQDWKARLKIPPPDTRYQTEDVTATKGN 147
LG +D + + V + V E P +D R + Q +
Sbjct: 269 ASLGNHDIKLTKRVNRNVTDEELYPPLDINTVREDLSKRKSVDNVMEEKQEPHDSIYSAK 328
Query: 148 EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 207
F++ + L + G K + +Q+ ++ L G D L +AK GTGK+ AF +PA+E
Sbjct: 329 RFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIE 388
Query: 208 KIDHDNNV---------IQVVILVPTRELALQTSQVCKELGK-HLKIQVMVTTGGTSLKD 257
+ N I +IL PTRELA Q + K L K H I V GGT K
Sbjct: 389 TVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRFKL 448
Query: 258 DIMRL-YQPVHLLVGTPGRILDLA--KKGVCI-LKDCSMLVMDEADKLLSPEFQPSIEQL 313
D RL +P +L+ TPGR+LD K G+ L + ++DEAD LL F+ +E++
Sbjct: 449 DQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKI 508
Query: 314 IQFLSPNRQILMYSATYPVTVKDFKERYLRKPY----VINLMDELTLKGITQFYAFVEER 369
I L RQ L++SAT P V+ + L++ + I L T + Q
Sbjct: 509 IDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAPHE 568
Query: 370 QKVHCLNTLFSKLQINQS-----IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRN 424
H + L K IN + I+FC++ L+ + E+ + IHA+ Q HR
Sbjct: 569 SHFHLVPHLL-KEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRT 627
Query: 425 RVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLA 484
RV +F+ LV +D+ RG++ V +VI P + E Y+HR+GR+GR G G
Sbjct: 628 RVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGEG 687
Query: 485 VNLITYEDRFNLYRIEQELGTEIKQIP 511
+ LI +R+ L E+K +P
Sbjct: 688 LLLIAPWERYFL--------DELKDLP 706
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 177/348 (50%), Gaps = 16/348 (4%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN 213
L +++ + GFE +P+Q E+IP + D++ A G+GKT AF +P +E I N
Sbjct: 23 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 82
Query: 214 NV------IQVVILVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLKDDIMRLYQP- 265
+ + VI+ PTREL+ Q +V + L + ++ GG ++ D+ L +
Sbjct: 83 SYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEG 142
Query: 266 VHLLVGTPGRILDLAKKGVCI-LKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQIL 324
+LL+GTPGR+ D+ K+ + ++ +L++DEAD+LL FQ + +I L R+
Sbjct: 143 ANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 202
Query: 325 MYSATYPVTVKDFKERYLRKPY-VINLMDEL--TLKGITQFYAFVEERQKVHCLNTLFSK 381
++SAT V D + LR VI+ + T G+ Y E QK L L +
Sbjct: 203 LFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEADQKSSQLVHLLIE 262
Query: 382 LQINQSIIF---CNSVNRVELLAKKITEL-GYSCFYIHAKMLQDHRNRVFHDFRNGACRN 437
+ + ++F C V+ L+ KI L S F H KM Q R+ F +
Sbjct: 263 NKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEASSGV 322
Query: 438 LVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAV 485
L+CTD+ RG+DI ++ V+ +D P++ + ++HRVGR+ R G A+
Sbjct: 323 LLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAI 370
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 188/420 (44%), Gaps = 62/420 (14%)
Query: 146 GNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA 205
FE+ L LL + +GF P+ +Q ++P + G D + ++ G+GKT A+ +P
Sbjct: 109 AKSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPI 168
Query: 206 LEKI---------DHDNN----VIQVVILVPTRELALQ-TSQVCKELGKHLKIQVMVTTG 251
L +I H N IQ +I+ P+REL +Q +V K LG + V G
Sbjct: 169 LSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVG 228
Query: 252 GTS--LKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPS 309
G + +++ ++ +P ++VGTPGRI +++K G C LV+DE D+LLS F+
Sbjct: 229 GANRMRQEEALKKNKPA-IVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFRED 287
Query: 310 IEQLIQFLS--------------PNRQILMYSATYPVTVKDFKERYLRKPYVINLMDELT 355
I ++++ + NRQ ++ SAT P +V + + +P ++
Sbjct: 288 IHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTP 347
Query: 356 LK-------------------------------GITQFYAFVEERQKVHCLNTLFSKLQI 384
L + +Y + + KV L L
Sbjct: 348 LDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDA 407
Query: 385 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 444
I F N +++ + K+ G + +H + + R+ V F+NG + LV +L
Sbjct: 408 QSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELS 467
Query: 445 TRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELG 504
RG+D+ ++V+N + P +A Y HR GR+GR G G V + F + ++E++LG
Sbjct: 468 ARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQLG 527
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 187/383 (48%), Gaps = 34/383 (8%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F++ L E++ + E E P+ IQ IP + ++ + G+GKT A+ +P ++
Sbjct: 114 FQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQL 173
Query: 209 IDHDNNVI---------QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDI 259
+ D + + V+L PTREL+ Q +V K + H + + ++ +GG+ ++
Sbjct: 174 MREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRPQE 233
Query: 260 MRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSP 319
L + ++VGTPGRIL ++G + D + LV+DEAD + F P I + FL+P
Sbjct: 234 DSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRK---FLAP 290
Query: 320 -----------NRQILMYSATYPVTVKDFKERYLRKPYVINLMDELTLKGITQF-YAFVE 367
Q ++ +AT + V+ + + + +L K I + F++
Sbjct: 291 LNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQG--IEHLRTSTLHKKIANARHDFIK 348
Query: 368 ERQKVHCLNTLFSKLQIN-----QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDH 422
L L L+ + + ++FCN++N + ++E S H ++ +
Sbjct: 349 LSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQ 408
Query: 423 RNRVFHDFRN--GACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGH 480
R F++ G C LVCTDL RG+D+ V+ V+ FDFPKN+ YLHR GR+ R G
Sbjct: 409 RVENLKKFKDEEGDCPTLVCTDLAARGLDLD-VDHVVMFDFPKNSIDYLHRTGRTARMGA 467
Query: 481 LGLAVNLITYEDRFNLYRIEQEL 503
G +L++ +D+ RIE+ +
Sbjct: 468 KGKVTSLVSRKDQMLAARIEEAM 490
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 186/402 (46%), Gaps = 35/402 (8%)
Query: 139 EDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKT 198
EDV N + + L + G E PIQ + + L G+D++ RA+ G GKT
Sbjct: 88 EDVEVDNPNAVSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKT 147
Query: 199 AAFCIPALEKIDHD----------NNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMV 248
AF +P LE + + V++L+PTRELA Q + G L +
Sbjct: 148 LAFVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCC 207
Query: 249 TTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQP 308
GG S +L + V ++VGTPGRI D ++ V+DEAD++L F
Sbjct: 208 LYGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVE 267
Query: 309 SIEQLIQFL--SPNRQILMYSATYPVTVKDFKERYL-RKPYVINLMDELTLKGITQFYAF 365
+E ++ + S Q L++SAT P VK+ R+L R I+L+ +K
Sbjct: 268 DVELILGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHI 327
Query: 366 VEERQKVHCLNTLFSKL---------QINQSIIFCNSVNRVELLAKKITELGYSCFYIHA 416
+ C ++L Q+IIF + +V +++ L +H
Sbjct: 328 A-----IPCNKAAMARLIPDIISCYSSGGQTIIFAETKVQV----SELSGLLDGSRALHG 378
Query: 417 KMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSG 476
++ Q R FRNG LV T++ RG+DI V ++I + P+ E Y+HR GR+G
Sbjct: 379 EIPQSQREVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTG 438
Query: 477 RYGHLGLAVNLITYEDR-FNLYRIEQELGTEIKQI-PPHIDQ 516
R G+ G+AV L Y+ R ++ RIE+E G + + + P D+
Sbjct: 439 RAGNTGVAVTL--YDSRKSSVSRIEKEAGIKFEHLAAPQPDE 478
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 201/415 (48%), Gaps = 35/415 (8%)
Query: 102 NVVEEVEKTVQS-ESADPSSQDWKARLKIPPPDTRY-QTEDVTATKGNEFEDYFLKRELL 159
N VEE+ Q ES P S L+ P D++ ++ED G F Y R+
Sbjct: 17 NEVEEINLLKQWIESQKPDSGFNPLSLRPLPKDSKIGKSED--GKNGTVFSRYAGVRKFA 74
Query: 160 M---------GIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID 210
G+ + + + +Q +IP AL G DIL A+ G+GKT AF IP LEK+
Sbjct: 75 QLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLH 134
Query: 211 HD----NNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 266
+ + + +I+ PTRELA QT V ++GK K + GG D +
Sbjct: 135 RERWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHEM 194
Query: 267 HLLVGTPGRIL---DLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQI 323
++LV PGR+L D C +L++DEAD++L F+ ++ +I L +RQ
Sbjct: 195 NILVCAPGRLLQHMDETPNFEC--PQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQT 252
Query: 324 LMYSATYPVTVKDFKERYLRKPYVINLMDE---LTLKGITQFYAFVEERQKVHCLNTLFS 380
L++SAT VKD LR P I++ E T + Q V +K+ L + F
Sbjct: 253 LLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWS-FI 311
Query: 381 KLQINQSI-IFCNSVNRVELLAKKITEL--GYSCFYIHAKMLQDHRNRVFHDF--RNGAC 435
K +N I +F ++ +V+ + + +L G +H KM Q+ R V+ F R
Sbjct: 312 KTHLNSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIERQSV- 370
Query: 436 RNLVCTDLFTRGIDI-QAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLIT 489
L CTD+ RG+D +AV+ V+ D P++ +Y+HRVGR+ R+ G ++ +T
Sbjct: 371 --LFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLT 423
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 206/454 (45%), Gaps = 42/454 (9%)
Query: 91 LRRT----QLGGNDTNVVEEVEKTVQSESADPS------SQDWKARLKIPPPDTRYQTED 140
LR+T LG +D + + V + V E P +D + + Q
Sbjct: 309 LRKTGSSASLGNHDIKLTKRVNRNVTDEELYPPLDINRVREDLSKKQSVDNVMEEKQEPH 368
Query: 141 VTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAA 200
+ F++ + L + G K + +Q+ ++ L G D L +AK GTGK+ A
Sbjct: 369 DSIYSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMA 428
Query: 201 FCIPALEKI---------DHDNNVIQVVILVPTRELALQTSQVCKELGK-HLKIQVMVTT 250
F +PA+E + H I V+IL PTRELA Q + K L K H I V
Sbjct: 429 FLLPAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLI 488
Query: 251 GGTSLKDDIMRL-YQPVHLLVGTPGRILDLA--KKGVCI-LKDCSMLVMDEADKLLSPEF 306
GGT + D RL +P +L+ TPGR+LD K G+ L + ++DEAD LL F
Sbjct: 489 GGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGF 548
Query: 307 QPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPY----VINLMDELTLKGITQF 362
+ +E++I L RQ L++SAT P V+ + L++ + I L T + Q
Sbjct: 549 KRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQS 608
Query: 363 YAFVEERQKVHCLNTLFSKLQIN-----QSIIFCNSVNRVELLAKKITELGYSCFYIHAK 417
H + L K IN + I+FC++ L+ + E+ + IHA+
Sbjct: 609 CIVAPHESHFHLVPHLL-KEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHAR 667
Query: 418 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
Q HR V +F+ LV +D+ RG++ V +VI P + E Y+HR+GR+GR
Sbjct: 668 KPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGR 727
Query: 478 YGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIP 511
G G + LI +R+ L E+K +P
Sbjct: 728 EGKGGKGLLLIAPWERYFL--------DELKDLP 753
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 174/357 (48%), Gaps = 25/357 (7%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN 213
L +++ + + FE +P+Q +IP+ + D+ A G+GKT AF +P +E +
Sbjct: 23 LSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRST 82
Query: 214 NV------IQVVILVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLKDDIMRLYQP- 265
+ + VI+ PTREL+ Q V + L + ++ GG +K D+ + +
Sbjct: 83 SFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEG 142
Query: 266 VHLLVGTPGRILDLAKK-GVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQIL 324
++L+GTPGR+ D+ ++ + ++ +L++DEAD+LL FQ + +I L R+
Sbjct: 143 CNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTG 202
Query: 325 MYSATYPVTVKDFKERYLRKPYVI------------NLMDELTLKGITQFYAFVEERQKV 372
++SAT V++ + LR P + L + T G+ Y E +K
Sbjct: 203 LFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADKKS 262
Query: 373 HCLNTLFSKLQINQSIIF---CNSVNRVELLAKKITEL-GYSCFYIHAKMLQDHRNRVFH 428
L L K + I+F C SV+ L+ KI L S IH M Q+ R++
Sbjct: 263 SQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKALA 322
Query: 429 DFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAV 485
F + L+CTD+ RG+DI ++ V+ +D P++ + HR GR+ R G G A+
Sbjct: 323 SFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAI 379
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 176/385 (45%), Gaps = 59/385 (15%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FE+ L L+ + +KG EKP+ IQ+ +IP L G D++ARAK G+GKT A+ +P L+K
Sbjct: 48 FEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQK 107
Query: 209 IDHDNNVIQ------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMR- 261
+ ++V + ILVP+REL Q L + ++Q+ +S+ MR
Sbjct: 108 LFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMRN 167
Query: 262 -LYQPVHLLVGTPGRILDLAKKGV----CILKDCSMLVMDEADKLLSPEFQPSIEQLIQF 316
L +LV TP I GV + + S+LV+DEAD LLS ++ ++ +
Sbjct: 168 ALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVTSI 227
Query: 317 LSPNRQILMYSATYPVTVKDFKERYLRKPYVINLM-----DELTLKGITQFYAFVEERQK 371
+ Q L+ SAT V+ K+ L P V+ L +E + QF+ + K
Sbjct: 228 IPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQDK 287
Query: 372 VHCLNTLFSKLQINQSI-IFCNSVN---RVELLAKKITELGYSCFYIHAKMLQDHRNRVF 427
+ + L + + I IF N+++ R++L +K G ++ ++ Q+ R +
Sbjct: 288 LLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEK---FGIKSAILNGELPQNSRLHIL 344
Query: 428 HDFRNGACRNLVCTD-----------------------------------LFTRGIDIQA 452
F G L+ TD RGID +
Sbjct: 345 EQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKK 404
Query: 453 VNVVINFDFPKNAETYLHRVGRSGR 477
V+ VINFD P++ Y+HR+GR+GR
Sbjct: 405 VHTVINFDMPQSVTGYIHRIGRTGR 429
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 191/431 (44%), Gaps = 77/431 (17%)
Query: 158 LLMGIYEKGFEKPSPIQEESIPIAL-TGSDILARAKNGTGKTAAFCIPALEKI-DHDNNV 215
L+ IY F++P+ IQ+ +A G D++ A+ G+GKT AF +P L+++ D V
Sbjct: 201 LMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKV 260
Query: 216 -------------------IQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 256
++ +I+ PTRELALQ ++ + K+L ++V+ GG +
Sbjct: 261 GKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSE 320
Query: 257 DDIMRLYQPVHLLVGTPGRILDLAKKG---VCILKDCSMLVMDEADKLLSPEFQPSIEQL 313
RL + ++V TPGR+ +L G + L S V+DEAD+++ ++ +
Sbjct: 321 KQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSI 380
Query: 314 IQFL----SPN--------------------RQILMYSATYPVTVKDFKERYLRKPYV-- 347
+ L PN RQ ++SAT ++ DF+++ R
Sbjct: 381 LDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALS-SDFRKKLKRGSSKSK 439
Query: 348 ------INLMDELTLKG--------------------ITQFYAFVEERQKVHCLNTLFSK 381
+N ++ L+ + I + + EE++K L + S
Sbjct: 440 QSSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSV 499
Query: 382 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 441
++I+FC SV + ++ + LG + ++M Q R + FR L+ T
Sbjct: 500 HGQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIAT 559
Query: 442 DLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQ 501
DL RGIDI+ V +I++ P +AE Y+HR GR+ R G ++ LI + Y + +
Sbjct: 560 DLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIEPNETSKFYTLCK 619
Query: 502 ELGTEIKQIPP 512
E +I P
Sbjct: 620 SFSMESVKIFP 630
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 184/442 (41%), Gaps = 90/442 (20%)
Query: 133 DTRYQTEDVTATKGN-----EFEDYFLKRELLMGIYEK-GFEKPSPIQEESIPIALTGSD 186
+T+ + +D + K F L +L + E+ GFE P+ +Q ++IP+ L+G D
Sbjct: 10 ETKQEAKDASKAKSGLFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRD 69
Query: 187 ILARAKNGTGKTAAFCIPALE-------KIDHDNNVIQVVILVPTRELALQTSQVCKELG 239
+L A GTGKT A+ P + K+D + +VI VPTREL LQ + ++L
Sbjct: 70 VLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVI-VPTRELCLQVYETLEKLL 128
Query: 240 KHLK-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-LAKKGVCILKDCSMLVMDE 297
I GG + RL + + +L+ TPGR+LD L + K+ ++ DE
Sbjct: 129 HRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDE 188
Query: 298 ADKLLSPEFQPSIEQLIQFLSPN----------------RQILMYSATYPVTVKDFKERY 341
AD +L + IEQ+I+ L +Q L+ SAT V D +
Sbjct: 189 ADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLS 248
Query: 342 LRKPYVIN-----LMDELTLKG---------------------ITQFYA----FVEERQK 371
L P +I L L+++ +++ Y V+ +
Sbjct: 249 LDDPVMIGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLR 308
Query: 372 VHC----------LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY------------ 409
V C L LF + + ++F ++ + V+ ++E +
Sbjct: 309 VPCGARLVALLSVLKNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTK 368
Query: 410 ------SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK 463
F +H M Q+ R F F+ L+ TD+ RG+D V +I +D P
Sbjct: 369 ELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPG 428
Query: 464 NAETYLHRVGRSGRYGHLGLAV 485
A Y+HRVGR+ R G G A+
Sbjct: 429 EATEYVHRVGRTARIGEKGEAL 450
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 188/411 (45%), Gaps = 48/411 (11%)
Query: 112 QSESADPSSQDWKARLKI------PPPDTRYQTEDVTAT---KGNEFEDYFLKRELLMGI 162
S+ +D +S+ W R + R +T+D T F + +++ +
Sbjct: 330 HSKGSDTNSRGWGDRRSVVYTRDMDDWRERNKTKDTRETGFFSRKTFAEIGCSEDMMKAL 389
Query: 163 YEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN--------- 213
E+ F++P+ IQ + + G + ++G+GKT A+ +P ++++ +
Sbjct: 390 KEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQRLREEELQGHSKSSP 449
Query: 214 NVIQVVILVPTRELALQTSQVCKELGKH-LKIQVMVTTGGTSLKDDIMRLYQPVHLLVGT 272
+V++LVPT ELA Q C+ + K + + MV TGG + + L Q V +L+ T
Sbjct: 450 GCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQLENLEQGVDVLIAT 509
Query: 273 PGRILDLAKKGVCILKDCSMLVMDEADKLLSP-EFQPSIEQLIQFLSPNRQILMYSATYP 331
PGR L +G+ L + ++DE D L EF+ +++ LI Q L +AT P
Sbjct: 510 PGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINSSPVTAQYLFVTATLP 569
Query: 332 VTVKD-----FKERYL----RKPYVINLMDELTL-------KGITQFYAFVEERQKVHCL 375
+ + + F + + R V N ++E + T AF + K L
Sbjct: 570 LEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAEKTPETAF---QNKKTAL 626
Query: 376 NTLFSKLQINQSIIFCNSVN---RVELLAKKI--TELGYSCFYIHAKMLQDHRNRVFHDF 430
+ + ++++IIFCN + +VE + K++ E HA + Q+ R +F
Sbjct: 627 LQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALSQESRLTNMQEF 686
Query: 431 RNGACRN----LVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
+ LVCTD +RGID V+ V+ FDFP++ Y+ RVGR+ R
Sbjct: 687 TSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTAR 737
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 166/382 (43%), Gaps = 31/382 (8%)
Query: 153 FLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHD 212
F+ +L + E GF P+ IQ E++P TG D + A+ G+GKT + + I+
Sbjct: 82 FVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQ 141
Query: 213 NNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTT------GGTSLKDDIMRLYQPV 266
+ +Q VI+VPTREL +Q ++V + L +I V T GGT + +P
Sbjct: 142 RSSVQAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPP 201
Query: 267 HLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQ-PSIEQLIQFLSP--NRQI 323
+LV T + + +K + + +LV+DE D L Q S+ +L+ S RQ
Sbjct: 202 AILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQT 261
Query: 324 LMYSATYPVT---VKD-FKERYLRKPYVINLMDELTLKGITQFYAFV--EERQKVHCLNT 377
+ SA+ P V D ++++ ++ V + + + + FV E+ K L
Sbjct: 262 VFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLA 321
Query: 378 LFSKLQINQSIIFCN-------------SVNRVELLAKKITELGYSCFYIHAKMLQDHRN 424
L +IIF S + K + + M + R
Sbjct: 322 LLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRA 381
Query: 425 RVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR---YGHL 481
+ R G LV TD+ RGID+ + NFD P+ YLHR GR+GR
Sbjct: 382 ASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDRK 441
Query: 482 GLAVNLITYEDRFNLYRIEQEL 503
+ NLIT E+RF L R E EL
Sbjct: 442 CIVANLITSEERFVLQRYENEL 463
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 146/308 (47%), Gaps = 28/308 (9%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN 213
L +++ + GFE +P+Q E+IP + D++ A G+GKT AF +P +E I N
Sbjct: 24 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 83
Query: 214 NV------IQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVH 267
+ + VI+ PTREL+ Q +V + + V +L++ + +
Sbjct: 84 SYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEE------EGAN 137
Query: 268 LLVGTPGRILDLAKKGVCI-LKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMY 326
LL+GTPGR+ D+ K+ + ++ +L++DEAD+LL FQ + +I L R+ ++
Sbjct: 138 LLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLF 197
Query: 327 SATYPVTVKDFKERYLRKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQ 386
SAT V D + LR PY+ D+ K + +E + K L F
Sbjct: 198 SATQTQAVADLAKAGLRNPYLKCEADQ---KSSQLVHLLIENKNKK--LVVFF------- 245
Query: 387 SIIFCNSVNRVELLAKKITEL-GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 445
+ C V+ L+ KI L S F H KM Q R+ F + L+CTD+
Sbjct: 246 --MTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAA 303
Query: 446 RGIDIQAV 453
RG+DI +
Sbjct: 304 RGLDIPGI 311
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 175/399 (43%), Gaps = 75/399 (18%)
Query: 186 DILARAKNGTGKTAAFCIPALEKI-DHDNNVIQVVILVPTRELALQTSQVCKELGKHLKI 244
DI + G+GKT ++ +P ++ + ++ ++++PTR+LALQ V + + +
Sbjct: 74 DICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVFDAIAPAVGL 133
Query: 245 QVMVTTGGTSLKDDIMRL-----------YQP----------VHLLVGTPGRILDLAK-- 281
V G +S+ +I +L Y P V +LV TPGR++D
Sbjct: 134 SVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNT 193
Query: 282 KGVCILKDCSMLVMDEADKLLSPEFQ---PSIEQLIQF----LSPNRQILMYSA---TYP 331
KG L+ LV+DE D+LL +Q P++ QL Q L P+ + SA
Sbjct: 194 KGF-TLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQT 252
Query: 332 VTVKDFKERYLRKPY--VINLMDELTLKG---------------ITQFYAFVEERQKVHC 374
V + + + KPY ++ ++ TL +T + +K+ C
Sbjct: 253 VRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLEC 312
Query: 375 LN-------------TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK---- 417
L L + + IIF +SV L K + G I AK
Sbjct: 313 LRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDP--KIKAKEYSG 370
Query: 418 -MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSG 476
+ Q R++ FR G + LV +D TRG+D++ V VIN+D P A+T++HR GR+
Sbjct: 371 GLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTA 430
Query: 477 RYGHLGLAVNLITYEDRFNLYRIEQELGTE---IKQIPP 512
R G G L++ + ++ +++G++ I IPP
Sbjct: 431 RAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPP 469
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 386 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFR-NGACRNLVCTDLF 444
++++F N+V VE +A + + C+ H D R + DFR G VCTD
Sbjct: 426 RTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADFRETGGV--FVCTDAA 483
Query: 445 TRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDR 493
RG+D+ V+ VI DF +A +LHR+GR+ R G G +L T +R
Sbjct: 484 ARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYTEANR 532
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 38/211 (18%)
Query: 138 TEDVTATKGNE--FEDYFLKRELL-------MGIYEKGFEKPSPIQEESIPIALTGSDIL 188
TE KGN+ F D+ + + L + + + GF++PS Q IP L+G D++
Sbjct: 62 TEAEVEKKGNDTFFADHTVSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVI 121
Query: 189 ARAKNGTGKTAAFCIPALEKIDH---DNNVIQ-----------VVILVPTRELALQTSQV 234
A+ G+GKT + P ++++ + D+ V +IL P L Q ++
Sbjct: 122 VAAETGSGKTHGYLAPIIDQLTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRM 181
Query: 235 CKEL----GKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAK----KGVCI 286
L G L ++V G D + ++V TP +L+ + + +
Sbjct: 182 VNGLVDEDGNPL-LRVEAVCGSQGWPDRLP------DIIVSTPAALLNNIEPKRNRRLEF 234
Query: 287 LKDCSMLVMDEADKLLSPEFQPSIEQLIQFL 317
L+ +V DEAD LL FQ I +LI L
Sbjct: 235 LRCVKYVVFDEADMLLCGSFQNQIIRLINML 265
>AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936233-16940172 FORWARD
LENGTH=713
Length = 713
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 144/330 (43%), Gaps = 47/330 (14%)
Query: 174 QEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQ 233
Q E+I ++G D G GK+ + IPAL K ++LV + +AL +Q
Sbjct: 41 QLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPG--------IVLVVSPLIALMENQ 92
Query: 234 VCKELGKHLKIQVMVTTGGTSLKDDI----------MRLYQPVHLLVGTPGRILDLAK-- 281
V K + + + +T T +K+ I +RL L+ T G +L L K
Sbjct: 93 VMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLH 152
Query: 282 -KGVCILKDCSMLVMDEADKLLS--PEFQPSIEQLIQFLS--PNRQILMYSATY-PVTVK 335
+G+ +++ +DEA + S +F+PS QL + +L +AT P K
Sbjct: 153 SRGLL-----NLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQK 207
Query: 336 DFKERY-LRKPYVI-------NLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQS 387
D + LR P V+ N+ E+ K + A+ + L L +
Sbjct: 208 DVIDSLNLRNPLVLKSSFNRPNIFYEVRYKDLLD-NAYTD-------LGNLLKSCGNICA 259
Query: 388 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 447
II+C + L+ ++ +G S HA + R+ V D+ + + +V T F G
Sbjct: 260 IIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMG 319
Query: 448 IDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
ID + V +V +F+ PK+ E++ GR+GR
Sbjct: 320 IDKKDVRMVCHFNIPKSMESFYQESGRAGR 349
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 31/306 (10%)
Query: 229 LQTSQVCKELGKHLKIQVMVTT------GGTSLKDDIMRLYQPVHLLVGTPGRILDLAKK 282
+Q ++V + L +I V T GGT + +P +LV T + + +K
Sbjct: 1 MQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEK 60
Query: 283 GVCILKDCSMLVMDEADKLLSPEFQ-PSIEQLIQFLSP--NRQILMYSATYPVT---VKD 336
+ + +LV+DE D L Q S+ +L+ S RQ + SA+ P V D
Sbjct: 61 HIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTVFASASIPQHKHFVHD 120
Query: 337 -FKERYLRKPYVINLMDELTLKGITQFYAFV--EERQKVHCLNTLFSKLQINQSIIFCN- 392
++++ ++ V + + + + FV E+ K L L +IIF
Sbjct: 121 CIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLALLESDAPESAIIFVGE 180
Query: 393 ------------SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 440
S + K + + M + R + R G LV
Sbjct: 181 QSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVS 240
Query: 441 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR---YGHLGLAVNLITYEDRFNLY 497
TD+ RGID+ + NFD P+ YLHR GR+GR + NLIT E+RF L
Sbjct: 241 TDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDRKCIVANLITSEERFVLQ 300
Query: 498 RIEQEL 503
R E EL
Sbjct: 301 RYENEL 306
>AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 |
chr1:11232422-11237412 FORWARD LENGTH=705
Length = 705
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 140/337 (41%), Gaps = 37/337 (10%)
Query: 166 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTR 225
G K Q+E I +TG D+L G GK+ + +PA+ + LV +
Sbjct: 86 GISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQLPAMLRGG--------TTLVVSP 137
Query: 226 ELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQP----VHLLVGTPGRILDLAK 281
L+L QV + ++ +T G + + + + + +L TP ++ +K
Sbjct: 138 LLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKV-SKSK 196
Query: 282 KGVCILKDC------SMLVMDEAD--KLLSPEFQPSIEQL----IQFLSPNRQILMYSAT 329
+ + L+ C S++ +DEA +F+P + L QF P ++ +AT
Sbjct: 197 RFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQF--PKVPMVALTAT 254
Query: 330 YPVTVKDFKERYLRKPYVINLMDELTLKGITQFYAFVEERQKVHCL------NTLFSKLQ 383
V++ L P + + + + FY+ V E+ V L +
Sbjct: 255 ATQKVQNDLIEMLHIPKCVKFVSSVNRPNL--FYS-VREKSAVGKLVVDEIAEFIRESYS 311
Query: 384 INQS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 442
N+S I++C S E +A + E G S Y HA M + R +V + + +V T
Sbjct: 312 NNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTV 371
Query: 443 LFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYG 479
F GI+ V VI+ K+ ETY GR+GR G
Sbjct: 372 AFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 408
>AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase
(RECQl4A) | chr1:3648032-3654997 REVERSE LENGTH=1188
Length = 1188
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 143/347 (41%), Gaps = 47/347 (13%)
Query: 172 PIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQT 231
P Q E I ++GSD+ G GK+ + +PAL + + LV + ++L
Sbjct: 456 PNQREIINATMSGSDVFVLMPTGGGKSLTYQLPAL--------ICGGITLVISPLVSLIQ 507
Query: 232 SQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVH-------LLVGTPGRIL------- 277
Q+ L I + G + ++++Q ++ LL TP ++
Sbjct: 508 DQIMNLL--QANIPAASLSAGMEWAEQ-LKIFQELNSEHSKYKLLYVTPEKVAKSDSLLR 564
Query: 278 ---DLAKKGVCILKDCSMLVMDEAD--KLLSPEFQPSIEQL--IQFLSPNRQILMYSATY 330
+L +G+ + V+DEA +F+P + L ++ PN +L +AT
Sbjct: 565 HLENLNSRGLL-----ARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALTATA 619
Query: 331 PVTVKDFKERYLRKPYVIN-LMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQ--- 386
+VK E ++ ++N ++ + +Y+ V + +K CL + ++ N
Sbjct: 620 TASVK---EDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKK--CLEDIDKFIKENHFDE 674
Query: 387 -SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 445
II+C S E +++++ E G+ + H M + R + + + T F
Sbjct: 675 CGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIICATVAFG 734
Query: 446 RGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
GI+ V VI+ PK+ E Y GR+GR G V Y D
Sbjct: 735 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGD 781
>AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 |
chr1:11233174-11237412 FORWARD LENGTH=580
Length = 580
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%)
Query: 388 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 447
I++C S E +A + E G S Y HA M + R +V + + +V T F G
Sbjct: 192 IVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTVAFGMG 251
Query: 448 IDIQAVNVVINFDFPKNAETYLHRVGRSGRYG 479
I+ V VI+ K+ ETY GR+GR G
Sbjct: 252 INKPDVRFVIHHSLSKSMETYYQESGRAGRDG 283
>AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936788-16940172 FORWARD
LENGTH=620
Length = 620
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 39/264 (14%)
Query: 240 KHLKIQVMVTTGGTSLKDDI----------MRLYQPVHLLVGTPGRILDLAK---KGVCI 286
K + + + +T T +K+ I +RL L+ T G +L L K +G+
Sbjct: 6 KGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLL- 64
Query: 287 LKDCSMLVMDEADKLLS--PEFQPSIEQLIQFLS--PNRQILMYSATY-PVTVKDFKERY 341
+++ +DEA + S +F+PS QL + +L +AT P KD +
Sbjct: 65 ----NLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSL 120
Query: 342 -LRKPYVI-------NLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNS 393
LR P V+ N+ E+ K + A+ + L L +II+C
Sbjct: 121 NLRNPLVLKSSFNRPNIFYEVRYKDLLD-NAYTD-------LGNLLKSCGNICAIIYCLE 172
Query: 394 VNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAV 453
+ L+ ++ +G S HA + R+ V D+ + + +V T F GID + V
Sbjct: 173 RTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDV 232
Query: 454 NVVINFDFPKNAETYLHRVGRSGR 477
+V +F+ PK+ E++ GR+GR
Sbjct: 233 RMVCHFNIPKSMESFYQESGRAGR 256
>AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase
L4B | chr1:22431093-22438302 REVERSE LENGTH=1150
Length = 1150
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 136/341 (39%), Gaps = 35/341 (10%)
Query: 172 PIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQT 231
P Q E I ++G D+ G GK+ + +PAL + + LV + ++L
Sbjct: 472 PNQREIINATMSGCDVFVLMPTGGGKSLTYQLPAL--------LCAGITLVISPLVSLIQ 523
Query: 232 SQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ------PVHLLVGTPGRILDLAK--KG 283
Q+ L I + G + + L + LL TP ++ +
Sbjct: 524 DQIMNLL--QTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAKSESLLRH 581
Query: 284 VCILKDCSML---VMDEADKL--LSPEFQPSIEQL--IQFLSPNRQILMYSATYPVTVKD 336
+ IL S+L V+DEA + +F+P + L ++ PN +L +AT +VK
Sbjct: 582 LEILNSRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPMLALTATATTSVK- 640
Query: 337 FKERYLRKPYVIN-LMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQ----SIIFC 391
E ++ ++N ++ + +Y+ V + K CL + ++ N II+C
Sbjct: 641 --EDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTNK--CLEDIDKFIRENHFDECGIIYC 696
Query: 392 NSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQ 451
S E + + + G+ + H M R V + + T F GI+
Sbjct: 697 LSRMDCEKVTEALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGINKP 756
Query: 452 AVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
V VI+ PK+ E Y GR+GR G V +Y D
Sbjct: 757 DVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYTD 797
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%)
Query: 383 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 442
+I I++C ++++K + + + H+ + R R+ F + R +V T
Sbjct: 485 EIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVVVATV 544
Query: 443 LFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLG 482
F G+D V VI+F P + E Y+ +GR+GR G L
Sbjct: 545 AFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLS 584