Miyakogusa Predicted Gene

Lj1g3v2448110.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2448110.2 tr|F2EJ57|F2EJ57_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,50.49,2e-16,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; seg,NULL; DUF827,Protein of unkno,CUFF.29035.2
         (208 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40480.1 | Symbols:  | Plant protein of unknown function (DUF...   117   4e-27
AT2G38370.1 | Symbols:  | Plant protein of unknown function (DUF...    97   1e-20
AT3G51720.1 | Symbols:  | Plant protein of unknown function (DUF...    79   2e-15
AT3G56270.1 | Symbols:  | Plant protein of unknown function (DUF...    79   2e-15
AT2G26570.1 | Symbols: WEB1 | Plant protein of unknown function ...    62   2e-10
AT4G33390.1 | Symbols:  | Plant protein of unknown function (DUF...    59   2e-09
AT5G42880.1 | Symbols:  | Plant protein of unknown function (DUF...    54   6e-08
AT1G45545.1 | Symbols:  | Plant protein of unknown function (DUF...    52   3e-07

>AT2G40480.1 | Symbols:  | Plant protein of unknown function
           (DUF827) | chr2:16910425-16912444 FORWARD LENGTH=518
          Length = 518

 Score =  117 bits (294), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 108/191 (56%), Gaps = 35/191 (18%)

Query: 20  PG--KQSFRTEIDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKL 77
           PG  +   R EIDTS PF SV+EAVT FGG GYW P     T  G        E D +++
Sbjct: 48  PGIRRVGLRAEIDTSPPFGSVQEAVTRFGGRGYWVPFKLDDTFNG--------EFDIKRM 99

Query: 78  EEQAAAMEKELILKERETLDVLKELESTKRLVEDXXXXXXXXXXXXXXXXXMNVSDQRSI 137
           EE AA +EK+LI+KE ETLDVL+ L STKR+VED                 +  SDQ S 
Sbjct: 100 EEHAAELEKDLIVKELETLDVLEALGSTKRIVED--------LKRQLQQEALRCSDQLSS 151

Query: 138 AXXXXXXXNQESQLDVLQHSKEGFIPNHSMLSSAPGLILMELNQAKLNLTKTTNDLADVR 197
                         D+ + + E    +H+ +SS P LILMEL QAK+NL KT ++L  ++
Sbjct: 152 --------------DIKEMNDEHC--HHNPMSS-PDLILMELKQAKMNLGKTMDNLVVIQ 194

Query: 198 AAVESLNKKLE 208
           ++VESLNKK++
Sbjct: 195 SSVESLNKKMK 205


>AT2G38370.1 | Symbols:  | Plant protein of unknown function
           (DUF827) | chr2:16072184-16074168 REVERSE LENGTH=522
          Length = 522

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 92/180 (51%), Gaps = 44/180 (24%)

Query: 28  EIDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKE 87
           EIDTSAPFESV+EA T FGG G+W+PS N +      S+  I+E D   L+ QA  +++E
Sbjct: 25  EIDTSAPFESVREAATRFGGFGFWRPSLNKLPDA---SQENIQEPDIMGLKAQAFELQRE 81

Query: 88  LILKERETLDVLKELESTKRLVEDXXXXXXXXXXXXXXXXXMNVSDQRSIAXXXXXXXNQ 147
           LI+KERETL+VLKELE+TK  V                                    N+
Sbjct: 82  LIVKERETLEVLKELEATKATV------------------------------LKLQQRNE 111

Query: 148 ESQLDVLQHSKEGFIPNHSMLSSAPGLILMELNQAKLNLTKTTNDLADVRAAVESLNKKL 207
             + D L+   +  I          G++L +L+QAK+NL K    +A +R +VE L  KL
Sbjct: 112 AYEEDTLREEVDSHI-------KPAGVVLKDLSQAKMNLCK----IASIRESVEQLKNKL 160


>AT3G51720.1 | Symbols:  | Plant protein of unknown function
           (DUF827) | chr3:19185119-19186518 FORWARD LENGTH=407
          Length = 407

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 87/181 (48%), Gaps = 55/181 (30%)

Query: 28  EIDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKE 87
           EIDTSAPFESV+EA T FGG G+WKPSS  I+    N    +          +A+ +EKE
Sbjct: 12  EIDTSAPFESVREAATRFGGFGFWKPSSLNISEASQNEVGMV---------LKASELEKE 62

Query: 88  LILKERETLDVLKELESTKRLVEDXXXXXXXXXXXXXXXXXMNVSDQRSIAXXXXXXXNQ 147
           LI KE ETL VLK LESTK +VE+                  N  D+            +
Sbjct: 63  LIEKEGETLKVLKSLESTKAIVEELKSKIQ------------NKEDK------------E 98

Query: 148 ESQLDVLQHSKEGFIPNHSMLSSAPGLILMELNQAKLNLTKTTNDLADVRAAVESLNKKL 207
              ++V +                       LNQAK+NL KTT DLA +R +V  LNK+L
Sbjct: 99  NCDMNVFKE----------------------LNQAKMNLCKTTKDLAAIRVSVGLLNKRL 136

Query: 208 E 208
           E
Sbjct: 137 E 137


>AT3G56270.1 | Symbols:  | Plant protein of unknown function
           (DUF827) | chr3:20870220-20871854 FORWARD LENGTH=446
          Length = 446

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 59/220 (26%)

Query: 3   AADT--GSAVVKTTTNRADPGKQSF----------RTEIDTSAPFESVKEAVTMFGGVGY 50
           AA+T  G+ V++    R   G ++F          R EID S           ++GG G+
Sbjct: 9   AAETIPGTPVIREV--RTGTGSENFNPENTRRGCLRAEIDISP---------QLYGGRGF 57

Query: 51  WKPSS--NVITCVGSNSKHRIEELDGEKLEEQAAAMEKELILKERETLDVLKELESTKRL 108
           W P +  +   CVG        E D +++EEQ   +EK+LI+KE ETLD+L+ L STKR+
Sbjct: 58  WVPFNLEDNYDCVG--------EFDIKRMEEQTVELEKDLIMKELETLDLLEALGSTKRI 109

Query: 109 VEDXXXXXXXXXXXXXXXXXMNVSDQRSIAXXXXXXXNQESQLDVLQHSKEGFIPNHSML 168
            ED                      Q+++         +E+   +  HSKE  +  H   
Sbjct: 110 FEDLKWQL----------------QQQALRC-------KETPQHLRSHSKE-MVDEHCHR 145

Query: 169 SS--APGLILMELNQAKLNLTKTTNDLADVRAAVESLNKK 206
           +   +P L+ ME+ QA +NL KT +DLA + +  ESLN K
Sbjct: 146 NPLKSPDLMTMEMKQAGMNLCKTMDDLALIHSYAESLNMK 185


>AT2G26570.1 | Symbols: WEB1 | Plant protein of unknown function
           (DUF827) | chr2:11299565-11302076 FORWARD LENGTH=807
          Length = 807

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 59/113 (52%), Gaps = 25/113 (22%)

Query: 6   TGSAVVKTTTNRADPGKQSFRTEIDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNS 65
           +GS V   T    D    S R  IDT+APFESVKEAV+ FGG+  WK             
Sbjct: 146 SGSPVSTGTPKNVD----SHRGLIDTAAPFESVKEAVSKFGGITDWKS------------ 189

Query: 66  KHRIEELDGEKL-EEQAAAMEKELI-------LKERETLDVLKELESTKRLVE 110
            HR++ ++  KL EE+   + +E+          E   L VLKELESTKRL+E
Sbjct: 190 -HRMQAVERRKLIEEELKKIHEEIPEYKTHSETAEAAKLQVLKELESTKRLIE 241


>AT4G33390.1 | Symbols:  | Plant protein of unknown function
           (DUF827) | chr4:16075282-16077706 FORWARD LENGTH=779
          Length = 779

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 25/98 (25%)

Query: 24  SFRTEIDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRI----------EELD 73
           SFR  IDT++PFESVKEAV+ FGG+  WK              HR+          +ELD
Sbjct: 151 SFRDSIDTASPFESVKEAVSKFGGITDWKA-------------HRMKVLERRNFVEQELD 197

Query: 74  GEKLEEQAAAMEKELILKERETLDVLKELESTKRLVED 111
             K++E+    +K+  + E   +  ++ELESTKRL+E+
Sbjct: 198 --KIQEEIPEYKKKSEMVEMSKMLAVEELESTKRLIEE 233


>AT5G42880.1 | Symbols:  | Plant protein of unknown function
           (DUF827) | chr5:17191758-17194091 FORWARD LENGTH=751
          Length = 751

 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 5/81 (6%)

Query: 29  IDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKEL 88
           IDT++PFESV+EAV+ FGG+  WK  ++ I  +    K   EEL  EK++E     ++E 
Sbjct: 134 IDTASPFESVREAVSKFGGITDWK--AHKIQTI-ERRKMVDEEL--EKIQEAMPEYKREA 188

Query: 89  ILKERETLDVLKELESTKRLV 109
            L E    D L+ELE+TK L+
Sbjct: 189 ELAEEAKYDALEELENTKGLI 209


>AT1G45545.1 | Symbols:  | Plant protein of unknown function
           (DUF827) | chr1:17180615-17182957 REVERSE LENGTH=752
          Length = 752

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 5/81 (6%)

Query: 29  IDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKEL 88
           IDT+APFESVKEAV+ FGG+  WK  ++ I  +    + +  + + EK++E     +K+ 
Sbjct: 155 IDTAAPFESVKEAVSKFGGITDWK--AHKIQTI---ERRKTVDQELEKIQEDMPDYKKQA 209

Query: 89  ILKERETLDVLKELESTKRLV 109
           ++ E     V+ ELE T+ +V
Sbjct: 210 VVAEEAKHQVVMELERTRNVV 230