Miyakogusa Predicted Gene

Lj1g3v2337900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2337900.1 Non Chatacterized Hit- tr|B9SI37|B9SI37_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,27.56,3e-16,VARLMGL,NULL; seg,NULL,CUFF.28909.1
         (420 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G01370.1 | Symbols: ACI1 | ALC-interacting protein 1 | chr5:1...    62   9e-10
AT5G58630.1 | Symbols:  | unknown protein; Has 1807 Blast hits t...    56   4e-08

>AT5G01370.1 | Symbols: ACI1 | ALC-interacting protein 1 |
           chr5:152575-154295 FORWARD LENGTH=427
          Length = 427

 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 113/466 (24%), Positives = 181/466 (38%), Gaps = 92/466 (19%)

Query: 1   MAKPENSKSGCFSGFLRVLLCAGSETSPP-------------VYPSEHADEPEVEHQTK- 46
           M +  N K+GC +  +R LLC+GS+ + P             +   E  +EP+ E +T+ 
Sbjct: 1   MTQRANPKTGCLTAVVRRLLCSGSQQTHPSDNILDSDETLQLLISYEENEEPKKEIKTET 60

Query: 47  ----DRKPVHAATTP---GVVARLMGLD--SLPSTKWVVKGATPDLVPRSRSVNFVDYLL 97
               D   +H    P    VVA+LMGLD  +  S ++     +   V RS+SVNF+DY+L
Sbjct: 61  ETQNDDVSLHPPPPPPPPNVVAKLMGLDHPAPGSKRFRYFDDSGSAVTRSKSVNFMDYIL 120

Query: 98  E---------FDPNHLNNHRRVKTSSSFREVPALVQR------QQKCDIFVLESDYNASK 142
           +          + +     RRVK S SFRE+     R      Q+K D  +L  D    K
Sbjct: 121 KGHEEEEENEDEKDGQRQCRRVKASVSFREIVPTSARWSSNNQQKKHDFLLLYLD----K 176

Query: 143 VQEERYNQVESREETGELXXXXXXXXXXXXXXXXXXXIKETAVRERVSVKKERNNQGKSK 202
           + E+R       E  G                     +  +A +     KKE     K  
Sbjct: 177 LDEKR-------ELVGSSSFSRSKRFEKVVEDSKKPPLPPSAPK-----KKENEKVAK-- 222

Query: 203 KISKLKNEPRRVPSSKQSSKVRNHNEARDFXXXXXXXXXXXCRFNGDCXXXXXXXXXXXX 262
              K K+EPR+V   K+S    N N+                  NG              
Sbjct: 223 ---KFKDEPRKVAKKKKS---ENRNDV-----------------NGAKKVRWFLSPSKSK 259

Query: 263 KRNNKGYVEPKIRNNMRNQQSPKKVEAEHSSENLSPVSVLDINDYPFLYGAE---FLDGT 319
             + K  +  + +N   ++   K+ E+  +  N SPVSVLD + Y +L   +   F  G 
Sbjct: 260 SSSEKTALLGESKNIRADEFIGKESESPENKSNASPVSVLDRDLYDYLILDDDYYFSGGD 319

Query: 320 STIAXXXXXXXXXXXXXXFLEDGVEERKNNDKCLAYTDSNS---EAEYFSELMMKVCTLV 376
           S  A                     + K + K      +N+   E E+ ++LM  +  L 
Sbjct: 320 SESASELSTKQVETATKSSCSSSPAKTKTSTKKENNNSTNNDSEETEFITKLMNMLSDLS 379

Query: 377 EKDIRESDCTLKTE-------NFEAICLEFEHKIFDHLLYEVVNEI 415
           E+D++ S     +          E  C+EF  +I D ++ ++V+E+
Sbjct: 380 EEDMKSSTWVSTSSTKPVDFTQVEDFCVEFGQEILDLVMDQLVDEL 425


>AT5G58630.1 | Symbols:  | unknown protein; Has 1807 Blast hits to
           1807 proteins in 277 species: Archae - 0; Bacteria - 0;
           Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
           Other Eukaryotes - 339 (source: NCBI BLink). |
           chr5:23696141-23697335 REVERSE LENGTH=372
          Length = 372

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 30/159 (18%)

Query: 10  GCFSGFLRVLLCAGSETSPPVYPSEHADEPEVEHQTKDRKPVHA-ATTPGVVARLMGLDS 68
           GC S  L+  LC+G+ ++   YPS+   EP  + +    +P+      PG VARLMGLDS
Sbjct: 23  GCISIILQRFLCSGTSST---YPSDLITEPSFKSRDFIPEPLRGRGDGPGAVARLMGLDS 79

Query: 69  LPSTKWVVKGATPDLVPRSRSVNFVDYLLEFDPNHLNNHRRVKTSSSFREVPALVQRQQK 128
           +P    V+       + RS SVN   +L   D      HRRVK++  + E+       + 
Sbjct: 80  IP----VIDKTR--FLSRSHSVN---HLKRDDDEIQGKHRRVKSTLEYVEL-------ED 123

Query: 129 CDIFVL--ESD--------YNASKVQEERYNQVESREET 157
            D F+L  E D         N  K ++ R NQ ++ ++T
Sbjct: 124 DDFFILSFEKDKNDKELGTRNCKKRRDTRENQSKTEDQT 162