Miyakogusa Predicted Gene
- Lj1g3v1526210.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1526210.1 Non Chatacterized Hit- tr|I1K9T9|I1K9T9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41274
PE,80.48,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no
description,Tetratricopeptide-like helical; PPR,,CUFF.28016.1
(503 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 463 e-130
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 6e-63
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 6e-52
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 5e-50
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 3e-37
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 8e-36
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 111 1e-24
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 111 1e-24
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 111 1e-24
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 53 6e-07
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 9e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 49 7e-06
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 463 bits (1191), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/470 (49%), Positives = 321/470 (68%), Gaps = 7/470 (1%)
Query: 25 SSADSGGSAFAHNNHDLKNLISKLRSPNRSPLTALQNWIDQGNVVPPSELRRISRTFLKS 84
S AD ++ N + LK ++ K P RS + LQ ID G+ V SELR IS+ ++S
Sbjct: 25 SLADGSDTSSVANRNSLKEILRK-NGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRS 83
Query: 85 KRYHHALEILKWMENQKNLRTIPDDHAMKLELIIETYGITEAEEYFRNLPDSAAK----K 140
RY AL++++WMENQK++ D A++L+LII+T+G+ + EEYF L S+ K
Sbjct: 84 NRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAK 143
Query: 141 AACLPLLRGYVRDRDSRKAETFMVKLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQ 200
+A LPLLR YV+++ ++AE M KL LG +V+PH +NEMMKLY A+ +Y KV +V+
Sbjct: 144 SAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSM 203
Query: 201 MRRNKVRCNVLSYNLWMSXXXXXXXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVK 260
M+ NK+ NVLSYNLWM+ + M D++VEVGWSSL TLANVY+K
Sbjct: 204 MKGNKIPRNVLSYNLWMNACCEVSGVAAVETV--YKEMVGDKSVEVGWSSLCTLANVYIK 261
Query: 261 AGQSDKAIQVLKNAETKLSTFGRLGYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCAN 320
+G +KA VL++AE L+ RLGYFFL+T+YASL KEGV+RLW+ SK+V GRISC N
Sbjct: 262 SGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVN 321
Query: 321 YICILTCLVKLEDIVQAKRIFMEWESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTL 380
YIC+L+ LVK D+ +A+R+F EWE+ C YD+R+SN+LLGAYVRNG + +AESLH L
Sbjct: 322 YICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVL 381
Query: 381 QKGGCPNYKTWEILIEGYLNTQRMDEAIISMKRALAMLKDCHWRPPHRHVLAIAEYLEKH 440
++GG PNYKTWEIL+EG++ + M++AI +M + +++ CHWRP H V+AIAEY EK
Sbjct: 382 ERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKE 441
Query: 441 GNFEYANEFITDIHNLGLGSVSLYKILLRMHLSANKPPFHILKMMDEDKV 490
E A ++ D+H LGL S+ LY++LLRMH A +P + I +MM DK+
Sbjct: 442 EKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLDKL 491
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 142/451 (31%), Positives = 242/451 (53%), Gaps = 10/451 (2%)
Query: 53 RSPLTALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQKNLRTIPDDHAM 112
RS + ++ W ++G+ V EL RI R K KRY HALEI +WM Q++++ D+A+
Sbjct: 75 RSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAV 134
Query: 113 KLELIIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAETFMVKLYELGLV 172
L+LI + G+ AE++F ++PD AAC LL YV+++ S KAE K+ E G +
Sbjct: 135 HLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFL 194
Query: 173 VSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRC--NVLSYNLWMSXXXXXXXXXXXX 230
S YN M+ +YI+ ++ KVP++I+++ K+R ++++YNLW++
Sbjct: 195 KSCLPYNHMLSMYISRGQFEKVPVLIKEL---KIRTSPDIVTYNLWLTAFASGNDVEGAE 251
Query: 231 XXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLSTFGRLGYFFLM 290
+ +E + W + + L N+Y K +KA LK E +S R+ Y L+
Sbjct: 252 KVY---LKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLI 308
Query: 291 TIYASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRIFMEWESNCRK 350
+++A+L +K+GV W K+ +++ A Y+ +++ +VKL + QAK ++ EWES
Sbjct: 309 SLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGT 368
Query: 351 YDIRISNILLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTWEILIEGYLNTQRMDEAIIS 410
D RI N++L Y+ + E + ++KG P+Y TWEIL YL + M++ +
Sbjct: 369 GDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDC 428
Query: 411 MKRALAMLKDCHWRPPHRHVLAIAEYLEKHGNFEYANEFITDIHNLGLGSVSLYKILLRM 470
+A+ +K W R V + LE+ GN + A + +T + G + LY LLR
Sbjct: 429 FGKAIDSVK--KWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRT 486
Query: 471 HLSANKPPFHILKMMDEDKVEMDNETLSIIK 501
+ A + + + M +D VE+D ET +I+
Sbjct: 487 YAKAGEMALIVEERMAKDNVELDEETKELIR 517
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 228/458 (49%), Gaps = 4/458 (0%)
Query: 45 ISKLRSPNRSPLTALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQKNLR 104
IS L P S LQNW+ G V +EL RI + KR+ HALE+ KWM
Sbjct: 31 ISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCV 90
Query: 105 TIPDDHAMKLELIIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAETFMV 164
P +HA+ L+LI YG AEEYF NL + LL YVR ++ K+
Sbjct: 91 FSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFE 150
Query: 165 KLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXXXXXX 224
K+ E+G V S YN +M LY ++ KVP V+++M+ V + SY + ++
Sbjct: 151 KMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMY 210
Query: 225 XXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLSTFGRL 284
M+ +++ + W++ A A Y+ G D+A+++LK +E +L
Sbjct: 211 DLERIGGT--LRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKKDGE 268
Query: 285 GYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRIFMEW 344
GY L+T+YA L +K VLRLWD K V R +Y+ +L LVK++ +V+A+ + EW
Sbjct: 269 GYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEW 328
Query: 345 ESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTWEILIEGYLNTQRM 404
+S+ YD R+ N ++ Y+ + E+AE++ ++G ++WE++ Y +
Sbjct: 329 KSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTL 388
Query: 405 DEAIISMKRALAM-LKDCHWRPPHRHVLAIAEYLEKHGNFEYANEFITDIHNLGLGSVSL 463
+ A MK AL + + WRP V ++ ++ G+ + F+ + N + +
Sbjct: 389 ENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCIGVNKQM 448
Query: 464 YKILLRMHL-SANKPPFHILKMMDEDKVEMDNETLSII 500
Y L++ + + +L+ M +DK+E+D ET I+
Sbjct: 449 YHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVIL 486
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 206/382 (53%), Gaps = 3/382 (0%)
Query: 45 ISKLRSPNRSPLTALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQ-KNL 103
IS + P + L W G + EL R+ + K KR + ALE+ WM N+ +
Sbjct: 73 ISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERF 132
Query: 104 RTIPDDHAMKLELIIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAETFM 163
R D A++L+LI + GI +AEE+F LP++ + LL YVR + KAE +
Sbjct: 133 RLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALL 192
Query: 164 VKLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXXXXX 223
+ + G + P +N MM LY+ EY KV ++ +M++ +R ++ SYN+W+S
Sbjct: 193 NTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSL 252
Query: 224 XXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLSTFGR 283
+ M++D ++ W++ +T+A +Y+K G+++KA L+ E +++ R
Sbjct: 253 GSVEKMELV--YQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNR 310
Query: 284 LGYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRIFME 343
+ Y +L+++Y SL K+ + R+W K+V I Y +++ LV++ DI A++++ E
Sbjct: 311 IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEE 370
Query: 344 WESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTWEILIEGYLNTQR 403
W YD RI N+L+ AYV+N +E AE L H ++ GG P+ TWEIL G+ +
Sbjct: 371 WLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRC 430
Query: 404 MDEAIISMKRALAMLKDCHWRP 425
+ EA+ ++ A + +WRP
Sbjct: 431 ISEALTCLRNAFSAEGSSNWRP 452
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 217/418 (51%), Gaps = 8/418 (1%)
Query: 87 YHHALEILKWMENQKNLRTIPDDHAMKLELIIETYGITEAEEYFRNLPDSAAKKAACLPL 146
Y+ AL++ + ME + +T+ D A+ L+L+ + IT E YF +LP+++ + L
Sbjct: 71 YYPALKLSEVMEERGMNKTV-SDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSL 129
Query: 147 LRGYVRDRDSRKAETFMVKLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKV 206
L Y ++ + KAE + K+ EL + S YN +M LY T E KVP +IQ+++ V
Sbjct: 130 LNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENV 189
Query: 207 RCNVLSYNLWMSXXXXXXXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDK 266
+ +YN+WM M D V W++ + +A++YV AG S K
Sbjct: 190 MPDSYTYNVWMRALAATNDISGVERV--IEEMNRDGRVAPDWTTYSNMASIYVDAGLSQK 247
Query: 267 AIQVLKNAETKLSTFGRLGYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCANYICILT 326
A + L+ E K + Y FL+T+Y L + V R+W + + + S Y+ ++
Sbjct: 248 AEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQ 307
Query: 327 CLVKLEDIVQAKRIFMEWESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQKGGCP 386
LVKL D+ A+ +F EW++NC YDIRI N+L+GAY + GL+++A L ++GG
Sbjct: 308 VLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKL 367
Query: 387 NYKTWEILIEGYLNTQRMDEAIISMKRALAMLK--DCHWRPPHRHVLAIAEYLEKHGNFE 444
N KTWEI ++ Y+ + M A+ M +A+++ K W P V A+ Y E+ +
Sbjct: 368 NAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVN 427
Query: 445 YANEFITDIHNLGLGSVS--LYKILLRMHLSANKPPFHILKMMDEDKVEMDNETLSII 500
A + + N G ++ +++ L+R + +A K + + + + VE++ T ++
Sbjct: 428 GAENLLEILKN-GTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLL 484
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 208/405 (51%), Gaps = 5/405 (1%)
Query: 41 LKNLISKLRSPNRSPLTALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQ 100
L+ +++ P+ S + L W+DQGN+V SEL I + K R+ HAL+I WM
Sbjct: 40 LQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEH 99
Query: 101 KNLRTIPDDHAMKLELIIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAE 160
+ D A++L+LI + G+ EAE++F +P LL Y + KAE
Sbjct: 100 RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAE 159
Query: 161 TFMVKLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXX 220
++ ELG + YN M+ LY+ T +Y V ++++M V+ ++ + N +
Sbjct: 160 QVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAY 219
Query: 221 XXXXXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLST 280
+ D+ + + W + A AN Y+KAG ++KA+++L+ +E ++
Sbjct: 220 SVVSDVEGMEKF--LMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 277
Query: 281 FGRL-GYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKR 339
R Y LM+ Y + +KE V RLW K + G + YI +++ L+K++DI + ++
Sbjct: 278 QKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTG-YISVISALLKMDDIEEVEK 336
Query: 340 IFMEWESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTWEILIEGYL 399
I EWE+ +DIRI ++L+ Y + G+ME+AE + +QK + TWE L GY
Sbjct: 337 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 396
Query: 400 NTQRMDEAIISMKRALAMLKDCHWRPPHRHVLAIAEYLEKHGNFE 444
+M++A+ KRA+ + K WRP +++ +YLE + E
Sbjct: 397 MAGKMEKAVEKWKRAIEVSKPG-WRPHQVVLMSCVDYLEGQRDME 440
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 225/473 (47%), Gaps = 12/473 (2%)
Query: 35 AHNNHDLKNLISKLRSPNRSPLTALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEIL 94
A +L +S L + L +I +G V +L R ++T K +R HA EI
Sbjct: 67 ASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIF 126
Query: 95 KWMENQKNLRTIPDDHAMKLELIIETYGITEAEEYFRNL-PDSAAKKAACLPLLRGYVRD 153
WME +K ++ DHA+ L+LI +T G+ AE YF NL P + ++ L+ Y +
Sbjct: 127 DWMEKRKMTFSV-SDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVE 185
Query: 154 RDSRKAETFMVKLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSY 213
+ KA+ + EL V + +N MM +Y+ + KVP+++ M++ + ++Y
Sbjct: 186 LEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTY 245
Query: 214 NLWMSXXXXXXXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKN 273
++WM M D + W++ + LA +Y KAG +KA LK+
Sbjct: 246 SIWMQSCGSLNDLDGLEKI--IDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKS 303
Query: 274 AETKLSTFGRLGYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLED 333
E K++ R + FLM++YA + + V R+W++ K ++ +Y+ +L + KL D
Sbjct: 304 MEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGD 363
Query: 334 IVQAKRIFMEWESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTWEI 393
+ K+IF EWES C YD+R++NI + Y++ + EEAE + ++K P K ++
Sbjct: 364 LDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQL 423
Query: 394 LIEGYLNTQRMDEAIISMKRALAMLKDC-----HWRPPHRHVLAIAEYLEKHGNFEYANE 448
L+ L D+A ++MK A + D W V + EK + + A +
Sbjct: 424 LMIHLLEN---DKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAED 480
Query: 449 FITDIHNLGLGSVSLYKILLRMHLSANKPPFHILKMMDEDKVEMDNETLSIIK 501
F + N L++ + +A K + + + + ++E+ E ++K
Sbjct: 481 FCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLLK 533
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 216/437 (49%), Gaps = 4/437 (0%)
Query: 59 LQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQKNLRTIPDDHAMKLELII 118
L ++ +G V +L R ++ K ++ ALEI +WME +K + DHA++L LI
Sbjct: 60 LNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWME-RKEIAFTGSDHAIRLNLIA 118
Query: 119 ETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAETFMVKLYELGLVVSPHLY 178
++ G+ AE YF +L DS ++ LL Y +++ KA+ + +L V + +
Sbjct: 119 KSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPF 178
Query: 179 NEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXXXXXXXXXXXXXXXXFSVM 238
N +M +Y+ + KVP ++ M+ + ++Y++W+ M
Sbjct: 179 NNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKV--LDEM 236
Query: 239 QNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLSTFGRLGYFFLMTIYASLKE 298
+ + W++ A LA +Y+K G KA + LK+ E ++ R Y FL+ +Y +
Sbjct: 237 KAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIAN 296
Query: 299 KEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRIFMEWESNCRKYDIRISNI 358
V R+WD K ++ ++Y+ +L L KL+DI K++F EWES C YD+R++N+
Sbjct: 297 ASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANV 356
Query: 359 LLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTWEILIEGYLNTQRMDEAIISMKRALAML 418
+ +Y++ + EEAE++ ++K K ++L+ L + D A+ + A+ +
Sbjct: 357 AISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAAV-LD 415
Query: 419 KDCHWRPPHRHVLAIAEYLEKHGNFEYANEFITDIHNLGLGSVSLYKILLRMHLSANKPP 478
+D +W + + + E+ + + A EF + S Y +L++ +L+A K
Sbjct: 416 QDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGKAC 475
Query: 479 FHILKMMDEDKVEMDNE 495
+ K ++E + +D E
Sbjct: 476 PDMKKRLEEQGILVDEE 492
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 169/341 (49%), Gaps = 5/341 (1%)
Query: 40 DLKNLISKLRSPNRSPLTALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMEN 99
DLK+ I +LR P RS T L+ WI +GN + +ELR IS+ +++RY HALE+ +WM
Sbjct: 56 DLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQ 115
Query: 100 QKNLRTIPDDHAMKLELIIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKA 159
+ + D+A +++LI + +GI AE YF L + LL Y + + +A
Sbjct: 116 HEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERA 175
Query: 160 ETFMVKLYEL-GLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMS 218
E ++ E L YNEMM LY++ + KVP VI+ +++ KV ++ +YNLW+S
Sbjct: 176 EALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLS 235
Query: 219 XXXXXXXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLK-NAETK 277
M++D + GW L ++Y+ + + A L AE
Sbjct: 236 --SCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKS 293
Query: 278 LSTFGRLGYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQA 337
+S + Y FLM ++ L K + ++W + + +S +YIC+L+ + L + +A
Sbjct: 294 ISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREA 353
Query: 338 KRIFMEW-ESNCRKYDIRISNILLGAYVRNGLMEEAESLHL 377
+ I +W ES ++D +L A+ GL A HL
Sbjct: 354 EEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHL 394
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 174/337 (51%), Gaps = 5/337 (1%)
Query: 109 DHAMKLELIIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAETFMVKLYE 168
D A++L+LI + G+ EAE++F +P LL Y + KAE ++ E
Sbjct: 13 DVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKE 72
Query: 169 LGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXXXXXXXXXX 228
LG + YN M+ LY+ T +Y V ++++M V+ ++ + N +
Sbjct: 73 LGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEG 132
Query: 229 XXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLSTFGRL-GYF 287
+ D+ + + W + A AN Y+KAG ++KA+++L+ +E ++ R Y
Sbjct: 133 MEKFLMRC--EADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYE 190
Query: 288 FLMTIYASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRIFMEWESN 347
LM+ Y + +KE V RLW K + G + YI +++ L+K++DI + ++I EWE+
Sbjct: 191 VLMSFYGAAGKKEEVYRLWSLYKELDGFYNTG-YISVISALLKMDDIEEVEKIMEEWEAG 249
Query: 348 CRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTWEILIEGYLNTQRMDEA 407
+DIRI ++L+ Y + G+ME+AE + +QK + TWE L GY +M++A
Sbjct: 250 HSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKA 309
Query: 408 IISMKRALAMLKDCHWRPPHRHVLAIAEYLEKHGNFE 444
+ KRA+ + K WRP +++ +YLE + E
Sbjct: 310 VEKWKRAIEVSKPG-WRPHQVVLMSCVDYLEGQRDME 345
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 160/326 (49%), Gaps = 4/326 (1%)
Query: 52 NRSPLTALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQKNLRTIPDDHA 111
N + L+ W QGN V PS +R I + S + AL++ +WM +K IP+D A
Sbjct: 49 NAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFA 108
Query: 112 MKLELIIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVR-DRDSRKAETFMVKLYELG 170
+L LI G+ EAE++F ++P +A + LL Y R D+ KAE K+ +LG
Sbjct: 109 ARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLG 168
Query: 171 LVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXXXXXXXXXXXX 230
L++ P YN MM LY A KV ++ +M+ N V + ++ N +
Sbjct: 169 LLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLK--LYSAVCDVTE 226
Query: 231 XXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLSTFG-RLGYFFL 289
+ + +++ W + +A Y++A S KA+++L+ E + + Y L
Sbjct: 227 MEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHL 286
Query: 290 MTIYASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRIFMEWESNCR 349
M +Y +E VLR+W K+ G Y ++ L+K++DIV A+ I+ WES
Sbjct: 287 MKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPL 346
Query: 350 KYDIRISNILLGAYVRNGLMEEAESL 375
++D RI +L Y G+ E+AE L
Sbjct: 347 EFDHRIPTMLASGYRDRGMTEKAEKL 372
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 13/178 (7%)
Query: 47 KLRSPNRSPLTALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQKNLRTI 106
K R N+ L+ W DQ + PS+L+ + + SK++ AL++ +WM ++
Sbjct: 379 KDRRMNKPVTPLLEQWGDQ---MKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLY 435
Query: 107 PDDHAMKLELIIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVR-DRD-SRKAETFMV 164
+D+A +L L G+ EAE+YF N+P++ + + LL Y + D++ + +
Sbjct: 436 LEDYAARLYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILR 495
Query: 165 KLYELGLVVSPHL--YNEMMKLYIATCEYRKVPLVIQ----QMRRNKVRCNVLSYNLW 216
++ E V P L N ++K+Y A + + + + ++ ++ + RC +NLW
Sbjct: 496 EMEENN--VDPDLITVNHVLKVYAAESKIQAMEMFMRRWAVEVYGDVARCKREVHNLW 551
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 207/456 (45%), Gaps = 21/456 (4%)
Query: 41 LKNLISKLRSPNRSPLTALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQ 100
K ++S +P S +AL W+++GN + E+ + + + Y AL++ +W+E
Sbjct: 133 FKTIVS---APGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEAN 189
Query: 101 KNLRTIPDDHAMKLELIIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAE 160
K + D+A +L+L ++ G+ + E + +P S + LL V + +K+E
Sbjct: 190 KKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSE 249
Query: 161 TFMVKLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXX 220
K+ +LG +S ++M+ L+ + +K+ V+ M + ++ ++L+Y + +
Sbjct: 250 LVFNKMKDLGFPLSGFTCDQMLLLH-KRIDRKKIADVLLLMEKENIKPSLLTYKILID-- 306
Query: 221 XXXXXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLST 280
M+ DE VE+ + + A A Y AG DKA +VLK E +
Sbjct: 307 VKGATNDISGMEQILETMK-DEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLE 365
Query: 281 FGRLGYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRI 340
R + L++IYASL ++ V R+W K + + + KL + +A+ I
Sbjct: 366 ANRRAFKDLLSIYASLGREDEVKRIW---KICESKPYFEESLAAIQAFGKLNKVQEAEAI 422
Query: 341 FMEWESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQKGGCP-NYKTWEILIEGYL 399
F + R+ ++LL YV + ++ + + L + + + GC TW+ LI+ Y+
Sbjct: 423 FEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDL-VKRMAESGCRIEATTWDALIKLYV 481
Query: 400 NTQRMDEAIISMKRALAMLKDCHWRPPHRHVLAIAEYLEKHGNFEYANEFITDIHNLGLG 459
+++A + +A K H + + I + K G+ + + G
Sbjct: 482 EAGEVEKADSLLDKA---SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYT 538
Query: 460 S-VSLYKILLRMHLSANKPPFHILKMMDEDKVEMDN 494
S + ++ L++ +++A P + + D+++ DN
Sbjct: 539 SRLRQFQALMQAYINAKSPAYGM-----RDRLKADN 569
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 207/456 (45%), Gaps = 21/456 (4%)
Query: 41 LKNLISKLRSPNRSPLTALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQ 100
K ++S +P S +AL W+++GN + E+ + + + Y AL++ +W+E
Sbjct: 133 FKTIVS---APGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEAN 189
Query: 101 KNLRTIPDDHAMKLELIIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAE 160
K + D+A +L+L ++ G+ + E + +P S + LL V + +K+E
Sbjct: 190 KKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSE 249
Query: 161 TFMVKLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXX 220
K+ +LG +S ++M+ L+ + +K+ V+ M + ++ ++L+Y + +
Sbjct: 250 LVFNKMKDLGFPLSGFTCDQMLLLH-KRIDRKKIADVLLLMEKENIKPSLLTYKILID-- 306
Query: 221 XXXXXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLST 280
M+ DE VE+ + + A A Y AG DKA +VLK E +
Sbjct: 307 VKGATNDISGMEQILETMK-DEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLE 365
Query: 281 FGRLGYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRI 340
R + L++IYASL ++ V R+W K + + + KL + +A+ I
Sbjct: 366 ANRRAFKDLLSIYASLGREDEVKRIW---KICESKPYFEESLAAIQAFGKLNKVQEAEAI 422
Query: 341 FMEWESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQKGGCP-NYKTWEILIEGYL 399
F + R+ ++LL YV + ++ + + L + + + GC TW+ LI+ Y+
Sbjct: 423 FEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDL-VKRMAESGCRIEATTWDALIKLYV 481
Query: 400 NTQRMDEAIISMKRALAMLKDCHWRPPHRHVLAIAEYLEKHGNFEYANEFITDIHNLGLG 459
+++A + +A K H + + I + K G+ + + G
Sbjct: 482 EAGEVEKADSLLDKA---SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYT 538
Query: 460 S-VSLYKILLRMHLSANKPPFHILKMMDEDKVEMDN 494
S + ++ L++ +++A P + + D+++ DN
Sbjct: 539 SRLRQFQALMQAYINAKSPAYGM-----RDRLKADN 569
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 207/456 (45%), Gaps = 21/456 (4%)
Query: 41 LKNLISKLRSPNRSPLTALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQ 100
K ++S +P S +AL W+++GN + E+ + + + Y AL++ +W+E
Sbjct: 133 FKTIVS---APGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEAN 189
Query: 101 KNLRTIPDDHAMKLELIIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAE 160
K + D+A +L+L ++ G+ + E + +P S + LL V + +K+E
Sbjct: 190 KKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSE 249
Query: 161 TFMVKLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXX 220
K+ +LG +S ++M+ L+ + +K+ V+ M + ++ ++L+Y + +
Sbjct: 250 LVFNKMKDLGFPLSGFTCDQMLLLH-KRIDRKKIADVLLLMEKENIKPSLLTYKILID-- 306
Query: 221 XXXXXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLST 280
M+ DE VE+ + + A A Y AG DKA +VLK E +
Sbjct: 307 VKGATNDISGMEQILETMK-DEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLE 365
Query: 281 FGRLGYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRI 340
R + L++IYASL ++ V R+W K + + + KL + +A+ I
Sbjct: 366 ANRRAFKDLLSIYASLGREDEVKRIW---KICESKPYFEESLAAIQAFGKLNKVQEAEAI 422
Query: 341 FMEWESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQKGGCP-NYKTWEILIEGYL 399
F + R+ ++LL YV + ++ + + L + + + GC TW+ LI+ Y+
Sbjct: 423 FEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDL-VKRMAESGCRIEATTWDALIKLYV 481
Query: 400 NTQRMDEAIISMKRALAMLKDCHWRPPHRHVLAIAEYLEKHGNFEYANEFITDIHNLGLG 459
+++A + +A K H + + I + K G+ + + G
Sbjct: 482 EAGEVEKADSLLDKA---SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYT 538
Query: 460 S-VSLYKILLRMHLSANKPPFHILKMMDEDKVEMDN 494
S + ++ L++ +++A P + + D+++ DN
Sbjct: 539 SRLRQFQALMQAYINAKSPAYGM-----RDRLKADN 569
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 189/436 (43%), Gaps = 13/436 (2%)
Query: 57 TALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQKNLRTIPDDHAMKLEL 116
+AL W++QG E K + + AL++ +W++ K D+A +L+L
Sbjct: 144 SALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYACRLDL 203
Query: 117 IIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAETFMVKLYELGLVVSPH 176
I + G + E Y + +P+S + LL +V + R AE K+ +LG +S
Sbjct: 204 ISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTF 263
Query: 177 LYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXXXXXXXXXXXXXXXXFS 236
N+M+ LY + +K+ V+ + + ++ N+ +Y + +
Sbjct: 264 TCNQMLILY-KRVDKKKIADVLLLLEKENLKPNLNTYKILID--TKGSSNDITGMEQIVE 320
Query: 237 VMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLSTFGRLGYFFLMTIYASL 296
M++ E VE+ + A +A Y AG +KA +VLK E + R L+++Y L
Sbjct: 321 TMKS-EGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYL 379
Query: 297 KEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRIFMEWESNCRKYDIRIS 356
+ ++ V R+W K + + K++ + A+ +F + + +
Sbjct: 380 QREDEVRRVW---KICEENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVY 436
Query: 357 NILLGAYVRNGLMEEAESLHLHTLQKGGCP-NYKTWEILIEGYLNTQRMDEAIISMKRAL 415
++LL YV + ++ E + L + + GC TW+ +I+ Y+ +++A S+ +A
Sbjct: 437 SVLLRVYVDHKMVSEGKDL-VKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLSKA- 494
Query: 416 AMLKDCHWRPPHRHVLAIAEYLEKHGNFEYANEFITDIHNLGLGS-VSLYKILLRMHLSA 474
++ +P + + + G+ + + G S Y+ L++ +++A
Sbjct: 495 --IQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNA 552
Query: 475 NKPPFHILKMMDEDKV 490
P + + + M D +
Sbjct: 553 KAPAYGMKERMKADNI 568
>AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3564079-3565779 FORWARD
LENGTH=541
Length = 541
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 143/314 (45%), Gaps = 39/314 (12%)
Query: 71 PSELRRISRTFLKSKRYHHALEILKWMENQKNLRTIPDDHAMKLELIIETYGITEAEEYF 130
PS LR I S R ALE+ WM QK + +P+D + + L + + EAE++F
Sbjct: 75 PSLLRGIVEKLRSSNRPRQALEVSDWMVEQK-MYNLPEDFSARFHLTEKVLNLEEAEKFF 133
Query: 131 RNLPDSAAKKAACLPLLRGYVR---DRDSRKAETFMVKLYELGLVVSPHLYNEMMKLYIA 187
++P++ ++ LLR Y R ++ +KAE+ K+ +LGL++ P YN M LY +
Sbjct: 134 ESIPENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSS 193
Query: 188 TCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXXXXXXXXXXXXXXXXFSVMQNDENVEVG 247
KV ++++M+ N V + ++ N N V
Sbjct: 194 LGNRDKVDEILREMKENNVELDNVTVN-------------------------NALRVYAA 228
Query: 248 WSSLATLANVYVKAGQSDKAIQVLKNAETKLSTFGRLGYFFLMTIYASLKEKEGVLRLWD 307
S +AT+ K I L L+ + LM++Y E E V R+WD
Sbjct: 229 VSDVATMDKFLA----DRKEITRLDG----LTMLAMAKAYELMSLYGEAGEIEDVHRVWD 280
Query: 308 ASKAVAGRISCANYICILTCLVKLEDIVQAKRIFM-EWESNCRKYDIRISNILLGAYVRN 366
KA + + ++ L+KL D A++I+ EWE + ++D RI ++L+ Y
Sbjct: 281 KYKATRQK-DNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREK 339
Query: 367 GLMEEAESLHLHTL 380
G++ +A+ L TL
Sbjct: 340 GMVMKADKLVNKTL 353
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Query: 54 SPLTALQNWIDQ-GNVVPPSELRRISRTFLKSKRYHHALEILKWMENQKNLRTIPDDHAM 112
+P+T L +D+ GN V P LR + + S + ALE WM +K +D+A
Sbjct: 360 TPITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYAT 419
Query: 113 KLELIIETYGITEAEEYFR-NLPDSAAKKAACLPLLRGYVRDRDSR-KAETFMVKLYELG 170
+L L + G+ EAE +F ++P++ + LL Y R +++ KAE K+ ELG
Sbjct: 420 RLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELG 479
Query: 171 LVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYN 214
L +N ++ LY + V +++ M+ + ++++ N
Sbjct: 480 LQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRN 523
>AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:16153609-16154468 FORWARD
LENGTH=257
Length = 257
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 8/214 (3%)
Query: 54 SPLTALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQKNLRTIPDDHAMK 113
S + L+ W QG V PS LR + + K + ALE KWM P+D A +
Sbjct: 51 SIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEASKWMFKHSVFDNFPEDCAAQ 110
Query: 114 LELIIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAETFMVKLYELGLVV 173
L L+ G+ EAE+ F+N+P+ + L VR D KAE K+ ELG ++
Sbjct: 111 LHLVNTVLGLEEAEKMFKNIPEKMRDYSVLLSSYTKPVRTVD--KAEATFKKMRELGFLL 168
Query: 174 SPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXXXXXXXXXXXXXXX 233
P+L+N M+ LY V ++ ++++N + L N
Sbjct: 169 KPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNMEVGSLKVN------NVSRVYANINAME 222
Query: 234 XFSVMQNDENVEVGWSSLATLANVYVKAGQSDKA 267
F + E +E+ ++ +A Y +AG +KA
Sbjct: 223 KFKTWVSKEGIELERDTIVAMAKAYHRAGSIEKA 256
>AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9756674-9757947 REVERSE
LENGTH=388
Length = 388
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 109/225 (48%), Gaps = 5/225 (2%)
Query: 59 LQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQKNLRTIPDDHAMKLELII 118
L W+ +G + P+ LR + + +S+R++HAL++ +W+ + +D A +L L+
Sbjct: 53 LDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLSTEDFASRLCLVE 112
Query: 119 ETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSR-KAETFMVKLYELGLVVSPHL 177
+ G+ EAE++F+++P++ + LL Y + +R +AE + +++ P+
Sbjct: 113 ISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTMRVQNMLLKPYP 172
Query: 178 YNEMMKLYIATCEYRKVPLVIQQMRRNKVR--CNVLSYNLWMSXXXXXXXXXXXXXXXXF 235
Y M+ LY E + +++QM+ N V N+ + N+ +
Sbjct: 173 YYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPDVEAMEMFLMGL 232
Query: 236 SVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLST 280
V + + W + ++A Y+K G S KA+++L+ E + T
Sbjct: 233 EV--EEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDT 275
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/441 (20%), Positives = 186/441 (42%), Gaps = 12/441 (2%)
Query: 59 LQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQKNLRTIPDDHAMKLELII 118
L+ W+ +G + +E+ K K Y L++ +W+ ++A +L+L+
Sbjct: 161 LEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVA 220
Query: 119 ETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAETFMVKLYELGLVVSPHLY 178
+ + + +AE + +++P+S+ + LL V KAE K+ EL S
Sbjct: 221 KVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFAC 280
Query: 179 NEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXXXXXXXXXXXXXXXXFSVM 238
N+++ LY + + +K+ V+ M R ++ + +Y+ ++
Sbjct: 281 NQLLLLY-SMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVE---T 336
Query: 239 QNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLSTFGRLGYFFLMTIYASLKE 298
+E +E+ + LA Y++AG ++A ++K E K L+ +YA + +
Sbjct: 337 IKEEGIELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGD 396
Query: 299 KEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRIFMEWESNCRKYDIRISNI 358
+ V RL S+ V N I + KL+++ +A+ +F + + +
Sbjct: 397 SDNVRRL---SRFVDQNPRYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPYFA 453
Query: 359 LLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTWEILIEGYLNTQRMDEAIISMKRALAML 418
L+ Y N ++ + L G TW L++ Y+ + +A + + RA
Sbjct: 454 LMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAGEVGKAELILNRA---T 510
Query: 419 KDCHWRPPHRHVLAIAEYLEKHGNFEYANEFITDIHNLGLGSVSL-YKILLRMHLSANKP 477
KD RP +AI E K G+ + + + + Y+ +L +++A P
Sbjct: 511 KDNKMRPMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYINAKTP 570
Query: 478 PFHILKMMDEDKVEMDNETLS 498
+ +++ M D V N++L+
Sbjct: 571 AYGMIERMKADNV-FPNKSLA 590
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 185/452 (40%), Gaps = 14/452 (3%)
Query: 57 TALQNWIDQGNVVPPSELRRISRTFLKSKRYHHALEILKWMENQKNLRTIPDDHAMKLEL 116
+ALQ+W+ G V ++ K R ALE+++W+ ++ R +++ LE
Sbjct: 83 SALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYSYLLEF 142
Query: 117 IIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAETFMVKLYELGLVVSPH 176
++ +G+++ E+ F +P + L+ + R A +M K+ ELG S
Sbjct: 143 TVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHL 202
Query: 177 LYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXXXXXXXXXXXXXXXXFS 236
+YN ++ A + + + M+ +K +V +Y++ M
Sbjct: 203 VYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGM 262
Query: 237 VMQNDENVEVGWSSLA---TLANVYVKAGQSDKAIQVLKNAETKLSTFGRLGYFFLMTIY 293
E EV + LA +A +Y A + I+ + ST LM +Y
Sbjct: 263 KKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDN-WSTLD-----ILMILY 316
Query: 294 ASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRIFMEWESNCRKYDI 353
L +++ + R W+ + + +Y+ ++ ++ +A+ +++E ++ +
Sbjct: 317 GRLGKEKELARTWNVIRGFH-HVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKET 375
Query: 354 RISNILLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTWEILIEGYLNTQRMDEAI--ISM 411
N LL Y ++GL+E+A + G PN T+ L G + M EA+ I M
Sbjct: 376 EQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEM 435
Query: 412 KRALAMLKDCHWRPP-HRHVLAIAEYLEKHGNFEYANEFITDIHNLGLGSVS-LYKILLR 469
L K P L+I E + G+ E + + ++ N + +Y L +
Sbjct: 436 GLNLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFK 495
Query: 470 MHLSANKPPFHILKMMDEDKVEMDNETLSIIK 501
++ A ++ K M D E+ S++K
Sbjct: 496 AYVKAKVYDPNLFKRMVLGGARPDAESYSLLK 527
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 110/248 (44%), Gaps = 6/248 (2%)
Query: 161 TFMVKLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSXX 220
T ++ ELG + HL+ +++ + ++ +M+ + + +++ YN+ +
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 248
Query: 221 XXXXXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLST 280
+ EV ++S+ V KA + D+A+++ ++ E
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI---GVLCKANRLDEAVEMFEHLEKNRRV 305
Query: 281 FGRLGYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRI 340
Y ++ Y S + + L + +A S Y CILTCL K+ + +A ++
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Query: 341 FMEWESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQKGGC-PNYKTWEILIEGYL 399
F E + + ++ NIL+ R G ++ A L ++QK G PN +T I+++
Sbjct: 366 FEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELR-DSMQKAGLFPNVRTVNIMVDRLC 423
Query: 400 NTQRMDEA 407
+Q++DEA
Sbjct: 424 KSQKLDEA 431
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%)
Query: 293 YASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRIFMEWESNCRKYD 352
+A + L+L ++A A + I++ L ++A+ +F E + K
Sbjct: 279 FAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPR 338
Query: 353 IRISNILLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTWEILIEGYLNTQRMDEAIISMK 412
R N LL YV+ G +++AES+ ++G P+ T+ +LI+ Y+N R + A I +K
Sbjct: 339 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK 398
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 10/264 (3%)
Query: 146 LLRGYVRDRDSRKAETFMVKLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNK 205
L+ + D KAE + ++ E G+ YN ++ +Y + + V +M R+
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 206 VRCNVLSYNLWMSXXXXXXXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSD 265
V N+++YN ++ F +++D V + TL + Y + D
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRL--FREIKDD--VTANHVTYTTLIDGYCRMNDID 324
Query: 266 KAIQVLKNAETKLSTFGRLGYFFLMTIY---ASLKEKEGVLRLWDASKAVAGRISCANYI 322
+A+++ + E++ + G + Y ++ ++E +L K I+C
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT-- 382
Query: 323 CILTCLVKLEDIVQAKRIFMEWESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQK 382
++ K+ED+V A ++ + + K D+ L+ + + +E A+ ++K
Sbjct: 383 -LINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEK 441
Query: 383 GGCPNYKTWEILIEGYLNTQRMDE 406
G P Y T+ L++G+ N + DE
Sbjct: 442 GFSPGYATYSWLVDGFYNQNKQDE 465
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 5/248 (2%)
Query: 243 NVEVGWSSLATLANVYVKAGQSDKAIQVLKNA-ETKLSTFGRLGYFFLMTIYASLKEKEG 301
N+EV T+ N K GQ+ KA ++L N E K + Y ++ + E +
Sbjct: 543 NIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDS 602
Query: 302 VLRLWDASKAVAGRISCANYICILTCLVKLEDIVQAKRIFMEWESNCRKYDIRISNILLG 361
+ ++ + Y ++ L K + QA + E ++ K DI L+
Sbjct: 603 AVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALID 662
Query: 362 AYVRNGLMEEAESLHLHTLQKGGCPNYKTWEILIEGYLNTQRMDEAIISMKRALAMLKDC 421
+ + ME A +L L++G P+ + LI G+ N M A+ K+ MLKD
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK---MLKD- 718
Query: 422 HWRPPHRHVLAIAEYLEKHGNFEYANEFITDIHNLGLGSVSLYKILLRMHLSANKPPFHI 481
R + + L K GN A+E T++ +GL + ++ LS +
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778
Query: 482 LKMMDEDK 489
+KM +E K
Sbjct: 779 VKMFEEMK 786
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 107/268 (39%), Gaps = 12/268 (4%)
Query: 146 LLRGYVRDRDSRKAETFMVKLYELGLVVSPHLYNEMMKLYIATC-----EYRKVPLVIQQ 200
L+ Y R +A + + E GL + YN + I C E+++V +
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAV----IDACGKGGMEFKQVAKFFDE 329
Query: 201 MRRNKVRCNVLSYNLWMSXXXXXXXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVK 260
M+RN V+ + +++N ++ F M N +E S TL + K
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNL--FDEMTN-RRIEQDVFSYNTLLDAICK 386
Query: 261 AGQSDKAIQVLKNAETKLSTFGRLGYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCAN 320
GQ D A ++L K + Y ++ +A + L L+ + + + +
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 321 YICILTCLVKLEDIVQAKRIFMEWESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTL 380
Y +L+ K+ +A I E S K D+ N LLG Y + G +E + +
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 381 QKGGCPNYKTWEILIEGYLNTQRMDEAI 408
++ PN T+ LI+GY EA+
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAM 534
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/257 (18%), Positives = 112/257 (43%), Gaps = 5/257 (1%)
Query: 152 RDRDSRKAETFMVKLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVL 211
+D D + + +K +E + VS N ++K + ++ V ++M+ N + +
Sbjct: 166 KDVDRIRFVSSEIKKFEFPMTVSAA--NALIKSFGKLGMVEELLWVWRKMKENGIEPTLY 223
Query: 212 SYNLWMSXXXXXXXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSDKAIQVL 271
+YN M+ F VM++ ++ + T+ Y KAGQ+ KA++ L
Sbjct: 224 TYNFLMNGLVSAMFVDSAERV--FEVMESGR-IKPDIVTYNTMIKGYCKAGQTQKAMEKL 280
Query: 272 KNAETKLSTFGRLGYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCANYICILTCLVKL 331
++ ET+ ++ Y ++ + + + L+ ++ + ++ L K
Sbjct: 281 RDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKE 340
Query: 332 EDIVQAKRIFMEWESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTW 391
+ + +F K ++ I +L+ Y ++G +E+A L + +G P+ T+
Sbjct: 341 GKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 400
Query: 392 EILIEGYLNTQRMDEAI 408
+++ G R++EA+
Sbjct: 401 SVVVNGLCKNGRVEEAL 417
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%)
Query: 251 LATLANVYVKAGQSDKAIQVLKNAETKLSTFGRLGYFFLMTIYASLKEKEGVLRLWDASK 310
+ TL VY+K G D++ ++L E+ + Y LM + + E ++D K
Sbjct: 310 MTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMK 369
Query: 311 AVAGRISCANYICILTCLVKLEDIVQAKRIFMEWESNCRKYDIRISNILLGAYVRNGLME 370
R +++ L + + +AK + + E+ K D+ + N +L AY R G ME
Sbjct: 370 GKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEME 429
Query: 371 EAESLHLHTLQKGGCPNYKTWEILIEGYL 399
+ ++ P+Y T+ ILI+ ++
Sbjct: 430 SVMRMMKKMDEQAVSPDYNTFHILIKYFI 458
>AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3558495-3560078 FORWARD
LENGTH=359
Length = 359
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 84 SKRYHHALEILKWMENQKNLRTIPDDHAMKLELIIETYGITEAEEYFRNLPDSAAKKAAC 143
+ R H ALE+ WM K +P+D + + +LI G+ EAE+YF ++P++ ++
Sbjct: 53 TARLHQALEVSDWMIEHKICCLVPEDFSARFQLIENVLGLEEAEKYFESIPENLRGESLY 112
Query: 144 LPLLRGYVR-------DRDSR 157
LLR Y + DR SR
Sbjct: 113 TALLRSYAKRSEKKYLDRASR 133
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 96/203 (47%), Gaps = 14/203 (6%)
Query: 23 LWSSADSGGSAFAHNNHDLKNLISKLRSPNRS-PLTALQNWIDQGNVVPPSELRRISRTF 81
+W+++ +G H + + +++ K R+ + L N ++ +V + ++ R
Sbjct: 154 IWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRL 213
Query: 82 LKSKRYHHALEILKWMENQKNLRTIPDDHAMK--LELIIETYGITEAEEYFRNLPDSAAK 139
KS +Y+ A++ ME ++T D AM ++ +++ I A E F L D+
Sbjct: 214 AKSGKYNKAVDAFLEMEKSYGVKT--DTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKP 271
Query: 140 KAACLPLL-RGYVRDR--DSRKAETFMVKLYELGLVVSPHL--YNEMMKLYIATCEYRKV 194
A +L G+ + R D +A ++K+ E +P + Y ++ Y ++R+V
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKVTEF----TPDVVTYTSFVEAYCKEGDFRRV 327
Query: 195 PLVIQQMRRNKVRCNVLSYNLWM 217
++++MR N NV++Y + M
Sbjct: 328 NEMLEEMRENGCNPNVVTYTIVM 350
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 93/242 (38%), Gaps = 7/242 (2%)
Query: 252 ATLANVYVKAGQSDKAIQVLKNAETKLSTFGRLGYFFLMTIYASLKEKEGVLRLWDASKA 311
+ N K G +D A +L E G L Y ++ K + L L+ +
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 312 VAGRISCANYICILTCLVKLEDIVQAKRIFMEWESNCRKYDIRISNILLGAYVRNGLMEE 371
R + Y +++CL A R+ + D+ + L+ A+V+ G + E
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 372 AESLHLHTLQKGGCPNYKTWEILIEGYLNTQRMDEAIISMKRALAMLKDCHWRPPHRHVL 431
AE L+ +++ P+ T+ LI G+ R+DEA K+ + H P
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA----KQMFEFMVSKHCFPDVVTYN 400
Query: 432 AIAEYLEKHGNFEYANEFITDIHNLGL-GSVSLYKILLRMHLSANKPPF--HILKMMDED 488
+ + K+ E E ++ GL G+ Y IL++ A I K M D
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 489 KV 490
V
Sbjct: 461 GV 462
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 117/302 (38%), Gaps = 34/302 (11%)
Query: 146 LLRGYVRDRDSRKAETFMVKLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNK 205
L++GY + +AE L E LV H+Y +M Y T + R V M
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361
Query: 206 VRCNVLSYNLWMSXXXXXXXXXXXXXXXXFSVMQNDENVEVGWSSLATLANVYVKAGQSD 265
VR N N ++ FS M ND +++ + TL + Y +AG D
Sbjct: 362 VRTNTTICNSLIN--GYCKSGQLVEAEQIFSRM-NDWSLKPDHHTYNTLVDGYCRAGYVD 418
Query: 266 KAIQVLKNAETKLSTFGRLGYFFLMTIYASLKEKEGVLRLWDA--SKAV-AGRISCANYI 322
+A+++ K + Y L+ Y+ + VL LW + V A ISC+
Sbjct: 419 EALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCST-- 476
Query: 323 CILTCLVKLEDIVQAKRIFMEWESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQK 382
+L L KL D +A +++ + D N+++ + + EA+ + L +
Sbjct: 477 -LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI-LDNVNI 534
Query: 383 GGC-PNYKTWEILIEGYLNTQRMDEAIISMKRALAMLKDCHWRPPHRHVLAIAEYLEKHG 441
C P +T++ L GY + EA A+ EY+E+ G
Sbjct: 535 FRCKPAVQTYQALSHGYYKVGNLKEA-----------------------FAVKEYMERKG 571
Query: 442 NF 443
F
Sbjct: 572 IF 573