Miyakogusa Predicted Gene

Lj1g3v1355780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1355780.1 Non Chatacterized Hit- tr|I3T4G7|I3T4G7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.14,0,seg,NULL;
coiled-coil,NULL; SNF7 - RELATED,NULL; Snf7,Snf7,CUFF.27149.1
         (215 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G09260.1 | Symbols: VPS20.2 | vacuolar protein sorting-associ...   296   6e-81
AT5G63880.1 | Symbols: VPS20.1 | SNF7 family protein | chr5:2556...   284   3e-77
AT5G63880.2 | Symbols: VPS20.1 | SNF7 family protein | chr5:2556...   270   4e-73
AT4G29160.2 | Symbols: SNF7.1 | SNF7 family protein | chr4:14381...    49   4e-06
AT4G29160.3 | Symbols: SNF7.1 | SNF7 family protein | chr4:14381...    48   4e-06
AT4G29160.1 | Symbols: SNF7.1 | SNF7 family protein | chr4:14381...    48   4e-06

>AT5G09260.1 | Symbols: VPS20.2 | vacuolar protein
           sorting-associated protein 20.2 | chr5:2876797-2878355
           FORWARD LENGTH=216
          Length = 216

 Score =  296 bits (759), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 153/216 (70%), Positives = 174/216 (80%), Gaps = 1/216 (0%)

Query: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIRXXXXXXXXX 60
           MGN+FVKKPK+T+VDRAIL+LKTQRRKL QYQQ+L+ VIEAEKQAARDLIR         
Sbjct: 1   MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  XXXXXXXXXXXXXQVDAWLLNVEQQLADIELASKQKAVFDSLKAGNDAMKAIQSEINIED 120
                        QVD WL+NVEQQLADIEL SKQKAVF+SLK GN+A+KAIQSE+N++D
Sbjct: 61  ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAIQSEVNLDD 120

Query: 121 VQKLMDDTEEAKAYQDEISAILGEKLSAEDEEEILAEFDNLETQLTVEDLPEVPAS-VSE 179
           VQKLMDDT EAKAYQDE+SAILGEKLSAEDEEEILAEFDNLE+ L VED+PEVP + +  
Sbjct: 121 VQKLMDDTAEAKAYQDELSAILGEKLSAEDEEEILAEFDNLESLLIVEDMPEVPTTELMP 180

Query: 180 ETDEKLDLPDVPTKAPATSSAEVSTKRKVMEEPLAA 215
           E  EK+DLPDVPTKAP  S+   STKRKV+EEPL A
Sbjct: 181 EEPEKMDLPDVPTKAPVASNETTSTKRKVLEEPLEA 216


>AT5G63880.1 | Symbols: VPS20.1 | SNF7 family protein |
           chr5:25563890-25565258 FORWARD LENGTH=219
          Length = 219

 Score =  284 bits (727), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 148/220 (67%), Positives = 175/220 (79%), Gaps = 6/220 (2%)

Query: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIRXXXXXXXXX 60
           MGN+FVKKP++T+VDRAIL+LKTQRRKL QYQQKL+ VIEAEKQAARDLIR         
Sbjct: 1   MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  XXXXXXXXXXXXXQVDAWLLNVEQQLADIELASKQKAVFDSLKAGNDAMKAIQSEINIED 120
                        QVD W++NVEQQL DIEL SKQKAVF+SLK GN A+KAIQSE++++D
Sbjct: 61  ALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDD 120

Query: 121 VQKLMDDTEEAKAYQDEISAILGEKLSAEDEEEILAEFDNLETQLTVEDLPEVPASVSEE 180
           VQKLMDDT +AKAYQDE++AILGEKLSAEDEE+ILAEFDNLE+QL V+++PEVP   SEE
Sbjct: 121 VQKLMDDTADAKAYQDELNAILGEKLSAEDEEDILAEFDNLESQLIVDEMPEVPTKESEE 180

Query: 181 TDEKLDLPDVPTKAPATSSAEVS-----TKRKVMEEPLAA 215
           + EKLDLPDVPTK P  S+AE++     TK KV+EEPL A
Sbjct: 181 S-EKLDLPDVPTKTPVASNAEITPAESATKTKVLEEPLPA 219


>AT5G63880.2 | Symbols: VPS20.1 | SNF7 family protein |
           chr5:25563890-25565258 FORWARD LENGTH=243
          Length = 243

 Score =  270 bits (691), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 148/244 (60%), Positives = 175/244 (71%), Gaps = 30/244 (12%)

Query: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIRXXXXXXXXX 60
           MGN+FVKKP++T+VDRAIL+LKTQRRKL QYQQKL+ VIEAEKQAARDLIR         
Sbjct: 1   MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  XXXXXXXXXXXXXQVDAWLLNVEQQLADIELASKQKAVFDSLKAGNDAMKAIQSEINIED 120
                        QVD W++NVEQQL DIEL SKQKAVF+SLK GN A+KAIQSE++++D
Sbjct: 61  ALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDD 120

Query: 121 VQKLMDDTEEAKAYQD------------------------EISAILGEKLSAEDEEEILA 156
           VQKLMDDT +AKAYQD                        E++AILGEKLSAEDEE+ILA
Sbjct: 121 VQKLMDDTADAKAYQDCENLYNLFCRAFVFDDSIYISECQELNAILGEKLSAEDEEDILA 180

Query: 157 EFDNLETQLTVEDLPEVPASVSEETDEKLDLPDVPTKAPATSSAEVS-----TKRKVMEE 211
           EFDNLE+QL V+++PEVP   SEE+ EKLDLPDVPTK P  S+AE++     TK KV+EE
Sbjct: 181 EFDNLESQLIVDEMPEVPTKESEES-EKLDLPDVPTKTPVASNAEITPAESATKTKVLEE 239

Query: 212 PLAA 215
           PL A
Sbjct: 240 PLPA 243


>AT4G29160.2 | Symbols: SNF7.1 | SNF7 family protein |
           chr4:14381350-14382342 FORWARD LENGTH=192
          Length = 192

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 12/146 (8%)

Query: 74  QVDAWLLNVEQQLADIELASKQKAVFDSLKAGNDAMKAIQSEINIEDVQKLMDD----TE 129
           Q+  + L +  Q+  +E A       D+L++G  AMKA+Q   NI+DV K MD+    TE
Sbjct: 48  QLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEINEQTE 107

Query: 130 EAKAYQDEISAILGEKLSAEDEEEILAEFDNLETQLTVEDLPEVPASVSEETDEKLDLPD 189
             K  Q+ ++  +G   +A+ +E+ LA   +      +E     PA+ +        LP 
Sbjct: 108 NMKQIQEALATPMG--AAADFDEDELAAELDELESEELESQLLQPATTAP------PLPS 159

Query: 190 VPTKAPATSSAEVSTKRKVMEEPLAA 215
           VP  A    +  V  KR   EE LAA
Sbjct: 160 VPVPAGRQPARPVPQKRTAEEEELAA 185


>AT4G29160.3 | Symbols: SNF7.1 | SNF7 family protein |
           chr4:14381019-14382342 FORWARD LENGTH=219
          Length = 219

 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 12/146 (8%)

Query: 74  QVDAWLLNVEQQLADIELASKQKAVFDSLKAGNDAMKAIQSEINIEDVQKLMDD----TE 129
           Q+  + L +  Q+  +E A       D+L++G  AMKA+Q   NI+DV K MD+    TE
Sbjct: 75  QLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEINEQTE 134

Query: 130 EAKAYQDEISAILGEKLSAEDEEEILAEFDNLETQLTVEDLPEVPASVSEETDEKLDLPD 189
             K  Q+ ++  +G   +A+ +E+ LA   +      +E     PA+ +        LP 
Sbjct: 135 NMKQIQEALATPMG--AAADFDEDELAAELDELESEELESQLLQPATTAP------PLPS 186

Query: 190 VPTKAPATSSAEVSTKRKVMEEPLAA 215
           VP  A    +  V  KR   EE LAA
Sbjct: 187 VPVPAGRQPARPVPQKRTAEEEELAA 212


>AT4G29160.1 | Symbols: SNF7.1 | SNF7 family protein |
           chr4:14381019-14382342 FORWARD LENGTH=219
          Length = 219

 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 12/146 (8%)

Query: 74  QVDAWLLNVEQQLADIELASKQKAVFDSLKAGNDAMKAIQSEINIEDVQKLMDD----TE 129
           Q+  + L +  Q+  +E A       D+L++G  AMKA+Q   NI+DV K MD+    TE
Sbjct: 75  QLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEINEQTE 134

Query: 130 EAKAYQDEISAILGEKLSAEDEEEILAEFDNLETQLTVEDLPEVPASVSEETDEKLDLPD 189
             K  Q+ ++  +G   +A+ +E+ LA   +      +E     PA+ +        LP 
Sbjct: 135 NMKQIQEALATPMG--AAADFDEDELAAELDELESEELESQLLQPATTAP------PLPS 186

Query: 190 VPTKAPATSSAEVSTKRKVMEEPLAA 215
           VP  A    +  V  KR   EE LAA
Sbjct: 187 VPVPAGRQPARPVPQKRTAEEEELAA 212