Miyakogusa Predicted Gene
- Lj1g3v1287000.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1287000.1 Non Chatacterized Hit- tr|I3S7N0|I3S7N0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.43,0,zf-RING_2,Zinc finger, RING-type; no description,Zinc
finger, RING/FYVE/PHD-type; seg,NULL; RING/U-b,CUFF.27063.1
(229 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 237 5e-63
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 208 2e-54
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 201 3e-52
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 194 5e-50
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 192 2e-49
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 152 2e-37
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 152 2e-37
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 131 3e-31
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 127 6e-30
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 125 2e-29
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 115 3e-26
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 110 5e-25
AT4G17245.1 | Symbols: | RING/U-box superfamily protein | chr4:... 107 8e-24
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 106 2e-23
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 84 1e-16
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 83 1e-16
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 82 3e-16
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 82 3e-16
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 81 7e-16
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 80 1e-15
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 80 1e-15
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 80 1e-15
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 79 2e-15
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 79 2e-15
AT4G09110.1 | Symbols: | RING/U-box superfamily protein | chr4:... 79 3e-15
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 78 6e-15
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 77 1e-14
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 77 1e-14
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 76 2e-14
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 76 2e-14
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 76 2e-14
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 75 3e-14
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 74 6e-14
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 74 6e-14
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 74 6e-14
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 74 7e-14
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 74 8e-14
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 74 9e-14
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 74 1e-13
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 73 2e-13
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 73 2e-13
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 72 2e-13
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 72 2e-13
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 72 2e-13
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 71 5e-13
AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein | ch... 71 6e-13
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 71 6e-13
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 71 7e-13
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 71 8e-13
AT4G17920.1 | Symbols: | RING/U-box superfamily protein | chr4:... 70 8e-13
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 70 8e-13
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 70 9e-13
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 70 1e-12
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 70 1e-12
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 70 2e-12
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 70 2e-12
AT5G42200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 69 2e-12
AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein | ... 69 2e-12
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 69 2e-12
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 69 3e-12
AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 | ch... 68 4e-12
AT2G47560.1 | Symbols: | RING/U-box superfamily protein | chr2:... 68 5e-12
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 67 8e-12
AT2G46493.1 | Symbols: | RING/U-box superfamily protein | chr2:... 67 8e-12
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 67 8e-12
AT3G11110.1 | Symbols: | RING/U-box superfamily protein | chr3:... 67 1e-11
AT5G40250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 67 1e-11
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 66 2e-11
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 65 3e-11
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 65 3e-11
AT5G07040.1 | Symbols: | RING/U-box superfamily protein | chr5:... 65 3e-11
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 65 3e-11
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 65 3e-11
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 65 4e-11
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 65 5e-11
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 64 6e-11
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 64 6e-11
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 64 7e-11
AT2G46495.1 | Symbols: | RING/U-box superfamily protein | chr2:... 64 8e-11
AT2G46494.1 | Symbols: | RING/U-box superfamily protein | chr2:... 64 9e-11
AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B | chr4:6906066... 63 1e-10
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 62 2e-10
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 2e-10
AT2G46160.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 3e-10
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 62 4e-10
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 62 4e-10
AT2G34000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 60 9e-10
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 60 1e-09
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 60 1e-09
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 60 1e-09
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 60 1e-09
AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 60 2e-09
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 60 2e-09
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 60 2e-09
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 60 2e-09
AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A | chr4:6907777... 60 2e-09
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 59 2e-09
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 59 2e-09
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 59 2e-09
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 59 2e-09
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 59 2e-09
AT3G61550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 59 3e-09
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 59 3e-09
AT5G46650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 4e-09
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 5e-09
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 58 6e-09
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 58 6e-09
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 57 7e-09
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 57 7e-09
AT4G30370.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 8e-09
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 57 9e-09
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 57 9e-09
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 1e-08
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 1e-08
AT1G35625.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 1e-08
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 1e-08
AT3G60966.1 | Symbols: | RING/U-box superfamily protein | chr3:... 57 1e-08
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 57 1e-08
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 56 2e-08
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 56 2e-08
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 56 2e-08
AT5G41400.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 3e-08
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 3e-08
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 55 4e-08
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 5e-08
AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2... 54 6e-08
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 54 7e-08
AT2G44330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 9e-08
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 54 9e-08
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 9e-08
AT1G51930.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 1e-07
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 1e-07
AT1G63840.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 1e-07
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 1e-07
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 53 1e-07
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 53 2e-07
AT2G28920.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 2e-07
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 2e-07
AT5G41430.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 2e-07
AT3G60080.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 2e-07
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 3e-07
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 3e-07
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 52 3e-07
AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 52 4e-07
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 52 4e-07
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 5e-07
AT3G16090.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 6e-07
AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A | chr1:5193703... 50 9e-07
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 9e-07
AT1G65040.2 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT5G41450.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT5G20885.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 1e-06
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT5G37280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 2e-06
AT4G38140.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 2e-06
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 49 3e-06
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 49 3e-06
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 3e-06
AT5G37250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 3e-06
AT5G02750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT4G00305.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 4e-06
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 48 4e-06
AT5G37230.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 5e-06
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 48 5e-06
AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B | chr2:... 48 6e-06
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 7e-06
AT5G37270.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 7e-06
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 7e-06
AT3G43430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 8e-06
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 237 bits (604), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 144/216 (66%), Gaps = 13/216 (6%)
Query: 11 LLHDLLEGFHSRRLLLQANPPASTISHDSEKAYLGDGNFDANVIMVLSVLLCALICSLGL 70
+ ++L +SR+LL + + T + Y+GD NFDANV+MVLSVLLCAL+CSLGL
Sbjct: 17 IFQEILGSSYSRKLLFHTHDQSPT---PAPSPYVGDNNFDANVVMVLSVLLCALVCSLGL 73
Query: 71 NSIIRCALRCSNLVVIGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVI 130
NSIIRCALRCSNLV N P R NTGVK+KALK+F VSYS ELNLP LD+EC I
Sbjct: 74 NSIIRCALRCSNLVPSEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAI 133
Query: 131 CLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCEKIVGAXXXXXXX 190
CLSEF E+V++LP C+HGFHVRCIDKWLSSHSSCP CR CLI+TCEKI
Sbjct: 134 CLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIADC------- 186
Query: 191 XXXXXXXXXNLLDPVLLETVVTIAPLEPEGMVRSYR 226
N P ++ IAPLEPE +R +R
Sbjct: 187 ---SQTSSLNSTQPPQDSIILQIAPLEPERWIRWFR 219
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 151/242 (62%), Gaps = 30/242 (12%)
Query: 13 HDLLEGFHSRRLLLQANPPASTISHDSEKAY--------LGDGNFDANVIMVLSVLLCAL 64
L GF SR+LLL NP H++++A+ + N NV+M+LS+L+C +
Sbjct: 15 EQFLGGFVSRKLLLH-NP----FDHNTQRAFAVAPSPLITHENNLSGNVMMLLSILICGI 69
Query: 65 ICSLGLNSIIRCALRCSNLVVIGDSVTN-SPTR-AANTGVKKKALKTFPVVSYSAELNLP 122
IC LGL+ IIRCALR S +I + V + S TR ++N G+KKKAL+ FPVVSYS E+NLP
Sbjct: 70 ICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLP 129
Query: 123 SLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCEKIVG 182
LD ECVICLS+F +GE++R+LPKCNHGFHVRCIDKWL H +CPKCR CL+ETC+KI+G
Sbjct: 130 GLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILG 189
Query: 183 AXXXXXXXXXXXXXXXXNLLDP-----VLLET----------VVTIAPLEPEGMVRSYRG 227
+ P +++ T +V IAPLEPEG V + R
Sbjct: 190 DFSQADSVTAEPTEIVIVTIVPLEPTEIVIVTIAPLEPTEIVIVMIAPLEPEGRVNTIRE 249
Query: 228 IS 229
IS
Sbjct: 250 IS 251
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 201 bits (511), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 139/221 (62%), Gaps = 26/221 (11%)
Query: 16 LEGFHSRRLLLQANPPASTISHDSEKAY--------LGDGNFDANVIMVLSVLLCALICS 67
L GF SR+LLL NP H++++A+ + N NV+M+LSVL+C +IC
Sbjct: 19 LGGFVSRKLLLH-NP----FDHNTQRAFAVAPSPLITHENNLSGNVLMLLSVLICGIICC 73
Query: 68 LGLNSIIRCALRCSNLVVIGDSVT--NSPTRAANTGVKKKALKTFPVVSYSAELNLPSLD 125
LGL+ IIRCA R ++ +I + + ++P ++N G+ KKAL+ FPVVSYS E+NLP L
Sbjct: 74 LGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGLG 133
Query: 126 SECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCEKIVGAXX 185
ECVICLS+F +GE++R+LPKC+HGFHVRCIDKWL H +CPKCR CL+ETC+KI+G
Sbjct: 134 EECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKILGDFS 193
Query: 186 XXXXXXXXXXXXXXNLLDPVLLETVVTIAPLEPEGMVRSYR 226
+V IAPLEPEG V R
Sbjct: 194 QADQVAATPTA-----------SVIVRIAPLEPEGRVNILR 223
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 194 bits (492), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 136/218 (62%), Gaps = 24/218 (11%)
Query: 11 LLHDLLEGFHSRRLLLQANPPASTISHDSEKAYLGDGNFDANVIMVLSVLLCALICSLGL 70
LLHD F L + A P+ I+H++ N NV+M+LSVL+C +IC LGL
Sbjct: 27 LLHD---PFDHNSLRVFAVAPSPLITHEN--------NLKGNVLMLLSVLICGIICCLGL 75
Query: 71 NSIIRCALRCSNLVVIGDSVTNSPTRAA--NTGVKKKALKTFPVVSYSAELNLPSLDSEC 128
+ IIRCA R S+ +I + +++ T + N G+KKKAL+ FPVVSYS E+NLP + EC
Sbjct: 76 HYIIRCAFRRSSRFMISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLPGIGEEC 135
Query: 129 VICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCEKIVGAXXXXX 188
VICLS+F +GE++R+LPKCNHGFHVRCIDKWL H +CPKCR CL+ETC+KI+G
Sbjct: 136 VICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQKILGDFSQAD 195
Query: 189 XXXXXXXXXXXNLLDPVLLETVVTIAPLEPEGMVRSYR 226
+V I PLEPEG V ++R
Sbjct: 196 SMASTPTE-----------SVIVRIDPLEPEGRVNTFR 222
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 192 bits (487), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 143/217 (65%), Gaps = 22/217 (10%)
Query: 15 LLEGFHSRRLLLQANPPASTISHDSEKAYLGD-GNFDANVIMVLSVLLCALICSLGLNSI 73
++ F SR+LL Q +H++++A++ D N NV+M+LS+LLC +ICSLGL+ I
Sbjct: 18 FIDSFVSRKLLQQI-----PFAHNAQQAHVPDKNNLSGNVLMLLSILLCGIICSLGLHYI 72
Query: 74 IRCALRCSNLVVIGD--SVTNSPTRAA-NTGVKKKALKTFPVVSYSAELNLPSLDSECVI 130
IRCA S +I D S+ ++P ++ N G+KKKALK PVV+YS E+NLP + ECVI
Sbjct: 73 IRCAFIRSRSFMISDPISIPSTPRDSSVNKGIKKKALKMLPVVNYSPEINLPGVGEECVI 132
Query: 131 CLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCEKIVGAXXXXXXX 190
CLS+F GE++R+LPKCNHGFH+RCIDKWL+ H +CPKCR CL++TC+K++
Sbjct: 133 CLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCLVDTCQKVLS-------- 184
Query: 191 XXXXXXXXXNLLDPVLLETV-VTIAPLEPEGMVRSYR 226
+ + E++ + I+PLEPE V ++R
Sbjct: 185 ----DCDAADQVAATATESIDIRISPLEPEARVATFR 217
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 106/161 (65%), Gaps = 12/161 (7%)
Query: 23 RLLL--QANPPASTISHDSEKAYLGDGNFDANVIMVLSVLLCALICSLGLNSIIRCALRC 80
RLLL QAN PA+ ++ K + D FD N++++L+ LLCALIC+L LNS +RC LR
Sbjct: 3 RLLLEPQANAPAN--ANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRI 60
Query: 81 SNLVVIGDSVTNSPTRAAN-------TGVKKKALKTFPVVSYSAELNLPSLDSECVICLS 133
+ D V+N+ AN TG+KK+ALK PV Y + + + +EC+ICL
Sbjct: 61 TRRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGI-IDMKATECLICLG 119
Query: 134 EFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLI 174
+F +GEKVR+LPKCNHGFHVRCID WL S SSCP CRQ L+
Sbjct: 120 DFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLL 160
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 103/161 (63%), Gaps = 11/161 (6%)
Query: 23 RLLLQANPPASTISHDSEKAYLGD--------GNFDANVIMVLSVLLCALICSLGLNSII 74
R LL + + D+ LGD + D +++++L+ LLCALIC+LG+NS++
Sbjct: 3 RFLLATQATPTISATDANPRTLGDSVSNNKNIASMDTHMVIILAALLCALICALGINSVL 62
Query: 75 RCALRCSNLVVIGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSE 134
RC LRC+ + ++ A G+KK+ALK PV SYS EL + + +EC+ICL +
Sbjct: 63 RCVLRCTRRFTPNEDPVDTNANVAK-GIKKRALKVIPVDSYSPELKMKA--TECLICLGD 119
Query: 135 FTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIE 175
F GE VR+LPKCNHGFHV+CID WL SHSSCP CRQ L+E
Sbjct: 120 FVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLE 160
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 100/158 (63%), Gaps = 13/158 (8%)
Query: 23 RLLLQANPPASTISHDSEKAYLGDGNFDANVIMVLSVLLCALICSLGLNSIIRCA----L 78
RLL+++N P+ I D+ A L +++++++L+ LLCALIC LGL ++ RC L
Sbjct: 7 RLLVESNTPSPAI--DNSTAAL-----NSDLVVILAALLCALICVLGLIAVSRCVWLRRL 59
Query: 79 RCSNLVVIGDSVT--NSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFT 136
N V G P AAN G+KKK L++ P +++S E +EC ICL+EF+
Sbjct: 60 AAGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFS 119
Query: 137 NGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLI 174
G+++R+LP+C HGFHV CID WL SHSSCP CRQ L+
Sbjct: 120 AGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILV 157
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 88/133 (66%), Gaps = 2/133 (1%)
Query: 49 FDANVIMVLSVLLCALICSLGLNSIIRCA-LRCSNLVVIGDSVTNSPTRAANTGVKKKAL 107
F+++++++L+VLLCAL C +GL ++ RCA LR D P AAN G+KKK L
Sbjct: 24 FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVL 83
Query: 108 KTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCP 167
++ P ++YS + EC ICL+EF G+++R+LP+C HGFHV CID WL SHSSCP
Sbjct: 84 RSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCP 143
Query: 168 KCRQCLIET-CEK 179
CRQ L+ T C K
Sbjct: 144 SCRQILVVTRCHK 156
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 102/155 (65%), Gaps = 7/155 (4%)
Query: 23 RLLLQANPPAS-TISHDSEKAYLGDGNFDANVIMVLSVLLCALICSLGLNSIIRCALRCS 81
RLLL+++ + T Y D NFDAN++++L+ LLCALI +LGLNSI+RCA+RC
Sbjct: 3 RLLLESHGGGNETSGSGGGDGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCG 62
Query: 82 NLVVIGDSVTNSPTRAANTGVKKKALKTFPVVSY-SAELNLPSLDSECVICLSEFTNGEK 140
+ S + T A G+KK+ LK FPV Y S E+ + + +EC ICL EF +GE+
Sbjct: 63 FGL---SSSAAAGTVADRAGLKKRELKKFPVAEYGSGEVKIAA--TECAICLGEFADGER 117
Query: 141 VRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIE 175
VR+LP CNH FH+ CID WL SHSSCP CR LIE
Sbjct: 118 VRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIE 152
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 94/158 (59%), Gaps = 23/158 (14%)
Query: 23 RLLLQANPPASTISHDSEKAYLGDGNFDANVIMVLSVLLCALICSLGLNSIIRCA-LRCS 81
RLL A PP SE+ + ++++++LS LLCALIC GL +++RCA LR
Sbjct: 6 RLLETAAPP----PQPSEEMIAAE----SDMVVILSALLCALICVAGLAAVVRCAWLR-- 55
Query: 82 NLVVIGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSL------DSECVICLSEF 135
GDS SP N G+KKKAL++ P +++A + +EC ICL++F
Sbjct: 56 RFTAGGDS--PSP----NKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDF 109
Query: 136 TNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
+GE++R+LP C H FHV CIDKWL S SSCP CR+ L
Sbjct: 110 ADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRIL 147
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 78/130 (60%), Gaps = 8/130 (6%)
Query: 41 KAYLGDGNFDANVIMVLSVLLCALICSLGLNSIIRCALRCSNLVVIGDSVTNSPTRAANT 100
K Y +F AN ++L +++ ALIC+L L + IRC LR + D P AA++
Sbjct: 28 KPYSNSTDFTANASVLLILVISALICALSLYAAIRCFLR--PTLETEDDHKPDPEAAASS 85
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL 160
T P + YS++L L ++EC ICLSEF GE +++L KC HGFHV+CI KWL
Sbjct: 86 T------PTTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWL 139
Query: 161 SSHSSCPKCR 170
S+ SSCP CR
Sbjct: 140 STRSSCPTCR 149
>AT4G17245.1 | Symbols: | RING/U-box superfamily protein |
chr4:9669383-9669883 FORWARD LENGTH=166
Length = 166
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 85/154 (55%), Gaps = 16/154 (10%)
Query: 23 RLLLQANPP----ASTISHD-SEKAYLGDGNFDANVIMVLSVLLCALICSLGLNSIIRCA 77
RLLL ++P ++ SH K Y +F AN ++L +L C+ IC L L++ IRC
Sbjct: 2 RLLLSSDPQPELTSTCTSHSCGWKPYSHSNDFAANAFLLLIILFCSFICVLSLHAAIRCC 61
Query: 78 LRCSNLVVIGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTN 137
LR V+ P A P + YS LNL ++EC+ICLSEF +
Sbjct: 62 LR----PVLQHVPKPDPDLEATHPDAP------PTLVYSPGLNLAGNEAECIICLSEFQD 111
Query: 138 GEKVRILPKCNHGFHVRCIDKWL-SSHSSCPKCR 170
G+ +R+L +C HGFHV CI KWL SSHSSCP CR
Sbjct: 112 GDTLRVLERCKHGFHVYCIQKWLSSSHSSCPTCR 145
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 85/139 (61%), Gaps = 16/139 (11%)
Query: 50 DANVIMVLSVLLCALICSLGLNSIIRCALRCSNLVVIGDSVTNSPTRAANTGVKKKALKT 109
+ +++++LS LLCAL+C GL ++ RCA V +V +P N G+KKKAL+
Sbjct: 23 ETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPP--PNKGLKKKALQA 80
Query: 110 FPVVSYSAEL-------NLP-------SLDSECVICLSEFTNGEKVRILPKCNHGFHVRC 155
P +Y+A +LP +EC IC++EF+ GE++RILP C+H FHV C
Sbjct: 81 LPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVAC 140
Query: 156 IDKWLSSHSSCPKCRQCLI 174
IDKWL+S SSCP CR+ L+
Sbjct: 141 IDKWLTSRSSCPSCRRILV 159
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Query: 48 NFDANVIMVLSVLLCALICSLGLNSI-IRCALRCSNLVVIGDSVTNSPTRAANTGVKKKA 106
N A+ I+ + VL A+ SLG+ S + C + G V +S R G++K+
Sbjct: 45 NLSADSIIAIVVL--AIFISLGMVSCCLHCIFYREEIGAAGQDVLHSRAR---RGLEKEV 99
Query: 107 LKTFPVVSYS--AELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHS 164
+++FP YS L + EC ICLSEF + E +R +P C+H FH CID WLSS S
Sbjct: 100 IESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWS 159
Query: 165 SCPKCRQCL 173
+CP CR L
Sbjct: 160 TCPVCRANL 168
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 98 ANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCID 157
+NTG+ L + P+V + + L EC ICLSE G+K R+LPKCNH FHV CID
Sbjct: 99 SNTGLTSFELSSLPIVFFRQDSCKDGL--ECSICLSELVKGDKARLLPKCNHSFHVECID 156
Query: 158 KWLSSHSSCPKCRQCLI 174
W SHS+CP CR ++
Sbjct: 157 MWFQSHSTCPICRNTVL 173
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 9/129 (6%)
Query: 50 DANVIMVLSVLLCALICSLGLNSII-RCALRCSNLVVIGDSVTN------SPTRAANTGV 102
DA +++ L + + G+++++ C ++C N N S T G+
Sbjct: 5 DAVILIHLGINIVFAFFFFGISAVVVSCIIKCYNTHDDDHDHDNNNDGHVSITIKERVGI 64
Query: 103 KKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSS 162
K L++ P+V ++ + L ECV+CLSE +G+K R+LP C+H FHV CID WL S
Sbjct: 65 KPYVLRSIPIVDFNTKDFKYVL--ECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQS 122
Query: 163 HSSCPKCRQ 171
+S+CP CR+
Sbjct: 123 NSTCPICRK 131
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 56 VLSVLLCALICSLGLNSIIRCALRCSNLVVIGDSVTNSPTRAANTGVKKKA------LKT 109
V +VL+ + L+ IR R + DS T AN G ++ +++
Sbjct: 49 VFAVLVTLFFLTGLLSVYIRHCARSN-----PDSSTRYFRNRANDGSSRRGGLDNAVVES 103
Query: 110 FPVVSYSA--ELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCP 167
FPV +YS+ E + S D EC ICL+E + E VR+LP CNH FH+ CID WL SH++CP
Sbjct: 104 FPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCP 163
Query: 168 KCRQCLIETCEK 179
CR L K
Sbjct: 164 VCRSNLTAKSNK 175
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 83 LVVIGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVR 142
+ D T + + A+ G+ +K+ PV ++S E + + EC +CLSEF E R
Sbjct: 76 VFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPI--ECAVCLSEFEESETGR 133
Query: 143 ILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCEKI 180
+LP C H FHV CID W SHS+CP CR L+E+ I
Sbjct: 134 VLPNCQHTFHVDCIDMWFHSHSTCPLCRS-LVESLAGI 170
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 99 NTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDK 158
N G+ K L++ VV + L EC +CLS+ +G+K R+LP+CNHGFHV CID
Sbjct: 93 NAGLDSKILQSIHVVVFKCTDFKDGL--ECAVCLSDLVDGDKARVLPRCNHGFHVDCIDM 150
Query: 159 WLSSHSSCPKCRQCLIETCEKIVGAXXXXXXXXXXXXXXXXNLLDPVLLETVVTIAPLEP 218
W SHS+CP CR + + G N +P ++ V EP
Sbjct: 151 WFQSHSTCPLCRNTVGSVEDTTHGGSEGLPQNQNFESGHSTNQHNPSQDQSFVHEFSTEP 210
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 99 NTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDK 158
++GV + + T PV Y + + L + +C +CL EF +K+R+LPKC+H FH+ CID
Sbjct: 105 DSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDT 164
Query: 159 WLSSHSSCPKCR 170
WL SHS+CP CR
Sbjct: 165 WLLSHSTCPLCR 176
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 53 VIMVLSVLLCALICSLGLNSIIR---CALRCSNLVVIGDSVTNSPTRAANTGVKKKALKT 109
+ V+ V+L A + +G SI + + + G + + + AA G+ ++T
Sbjct: 48 AMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAAARGLDVSVVET 107
Query: 110 FPVVSYS--AELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCP 167
FP YS L + EC ICL+EF + E +R+LPKC+H FH CID WL +H +CP
Sbjct: 108 FPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCP 167
Query: 168 KCRQCLIE 175
CR L E
Sbjct: 168 VCRANLAE 175
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 99 NTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDK 158
++GV + + T PV Y + + L +C +CL EF +K+R+LPKC+H FHV CID
Sbjct: 97 DSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDT 156
Query: 159 WLSSHSSCPKCRQCLI 174
WL SHS+CP CR L+
Sbjct: 157 WLLSHSTCPLCRSNLL 172
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 78/161 (48%), Gaps = 27/161 (16%)
Query: 27 QANPPASTISHDSEKAYLGDGNFDANVIMVLSVLLCALICSLGLNSII--RCALRCSNLV 84
QA S +S DS + FD + +L ++L ++ LG S+ RC R
Sbjct: 44 QATHGGSDVSGDSSR-------FDP-TMAILMIVLVSVFFFLGFFSVYIRRCLER----- 90
Query: 85 VIGDSVTNSPTRAAN---------TGVKKKALKTFPVVSYSA--ELNLPSLDSECVICLS 133
V+G N P A N G+ ++TFP YS L + EC +CL+
Sbjct: 91 VMGMDYGN-PNDAGNWLATNRQQARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLN 149
Query: 134 EFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLI 174
EF + E +R++PKC H FH CID WL SH++CP CR LI
Sbjct: 150 EFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLI 190
>AT4G09110.1 | Symbols: | RING/U-box superfamily protein |
chr4:5812488-5813396 FORWARD LENGTH=302
Length = 302
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
Query: 56 VLSVLLCALICSLGLNSIIRCALRCSNLVVIGDSVTNSPTRA-ANTGVKKKALKTFPVVS 114
V+++++ A+ SL S++ C L + ++ + + A G++K+ +++FP+
Sbjct: 51 VIAIIVLAIFISL---SMVACFLHKTFYRAEVEAASQEVFHSRARRGLEKELVESFPIFL 107
Query: 115 YS--AELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
YS L + EC ICLSEF + E +R +P C+H FH CID WLSS S+CP CR
Sbjct: 108 YSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACR 165
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 5/73 (6%)
Query: 100 TGVKKKALKTFPVVSYSAELNLPSLDS--ECVICLSEFTNGEKVRILPKCNHGFHVRCID 157
+G+ KKA+++ P +SA L L EC +CLS+F + E +R+LPKC H FH+ CID
Sbjct: 97 SGLDKKAIESLPFFRFSA---LKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCID 153
Query: 158 KWLSSHSSCPKCR 170
+WL H++CP CR
Sbjct: 154 QWLEQHATCPLCR 166
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL 160
G+ +K+ P+ ++SA L ++ EC +CLSEF + E R++P C H FHV CID W
Sbjct: 51 GLNPSIIKSLPIFTFSAVTALFAM--ECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWF 108
Query: 161 SSHSSCPKCRQCLIE 175
SHSSCP CR LIE
Sbjct: 109 HSHSSCPLCRS-LIE 122
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 86 IGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILP 145
+ SV S + G+ +A+++ PV Y+ + +CVICLS+F GE V+++P
Sbjct: 100 LSTSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAK--QRNEDCVICLSDFEEGETVKVIP 157
Query: 146 KCNHGFHVRCIDKWLSSHSSCPKCR 170
C H FHV C+D WLSS+ +CP CR
Sbjct: 158 HCGHVFHVDCVDTWLSSYVTCPLCR 182
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 95 TRAANTGVKKKALKTFPVVSYSA--ELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFH 152
TR + G+ K + +FP YS L + EC ICL+EF + E +R++P C+H FH
Sbjct: 93 TRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFH 152
Query: 153 VRCIDKWLSSHSSCPKCRQCL 173
CID WLSS S+CP CR L
Sbjct: 153 ASCIDVWLSSRSTCPVCRASL 173
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 37/49 (75%)
Query: 126 SECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLI 174
S+C +CLSEF E +R+LPKCNH FHV CID WL SHS+CP CR ++
Sbjct: 157 SDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIV 205
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 82 NLVVIGDSVTNSPTRAANTG--VKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGE 139
NL G+ +S R + G + + +K+ V Y + S+C +CLSEF E
Sbjct: 95 NLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVD-GSDCSVCLSEFEENE 153
Query: 140 KVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
+R+LPKCNH FH+ CID WL SHS+CP CR
Sbjct: 154 SLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 99 NTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDK 158
+ + + + P++ Y + L S+C +CL EFT +++R+LPKC+H FHV CID
Sbjct: 93 DAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDT 152
Query: 159 WLSSHSSCPKCRQ 171
WL ++S+CP CR
Sbjct: 153 WLLTNSTCPLCRD 165
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 100 TGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKW 159
+G+ K A+++ P+ +SA L +C +CLS+F + E +R+LPKC H FH+ CID+W
Sbjct: 96 SGLDKTAIESLPLFRFSA-LKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQW 154
Query: 160 LSSHSSCPKCR 170
L H++CP CR
Sbjct: 155 LEQHATCPLCR 165
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 100 TGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKW 159
TG+++ + + + +Y L ++C +CL+EF E +R+LPKCNH FH+ CID W
Sbjct: 150 TGLQQSIINSITICNYKRGDGLIER-TDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTW 208
Query: 160 LSSHSSCPKCR 170
LSSH++CP CR
Sbjct: 209 LSSHTNCPLCR 219
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 99 NTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDK 158
N+G+ + +++ PV + A L+ EC +CL+ F E +R+LPKC H FHV C+D
Sbjct: 64 NSGIDRSVIESLPVFRFGA-LSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDT 122
Query: 159 WLSSHSSCPKCR 170
WL +HS+CP CR
Sbjct: 123 WLDAHSTCPLCR 134
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 37/49 (75%)
Query: 126 SECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLI 174
++C ICL EF E +R+LPKCNH FHV CID+WL SHS+CP CR +I
Sbjct: 153 TDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKII 201
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 41 KAYLGDGNFDANVI---MVLSVLLCALICSLGLNSIIRCALRCSNLVVIGDSV-----TN 92
+ Y+ + ++ ++ ++ V +C ++ L + I+R R SN V S+ TN
Sbjct: 7 RTYIPSNSTESQILKFTFIVCVPICVILIVLLVLYIMR---RNSNTNVDWSSLGGFVPTN 63
Query: 93 SPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFH 152
+ A G+ K + P+V Y + D++C +CL ++ EK++ +P C H FH
Sbjct: 64 NNLSTAELGLSKDIREMLPIVIYKESFTVN--DTQCSVCLGDYQAEEKLQQMPSCGHTFH 121
Query: 153 VRCIDKWLSSHSSCPKCRQCLI 174
+ CID WL+SH++CP CR LI
Sbjct: 122 MECIDLWLTSHTTCPLCRLSLI 143
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 91 TNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHG 150
TN+ A G+ K + PVV Y + DS+C +CL ++ EK++ +P C H
Sbjct: 76 TNNNLSTAELGLSKDIREMLPVVIYKESFIVK--DSQCSVCLGDYQAEEKLQQMPSCGHT 133
Query: 151 FHVRCIDKWLSSHSSCPKCRQCLI 174
FH+ CID WL+SH++CP CR LI
Sbjct: 134 FHMECIDLWLTSHTTCPLCRLSLI 157
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 79 RCSNLVVIGDSVTNSPTRAA-NTGVKKKALKTFPVVSYSAELNLPSLDSE-CVICLSEFT 136
R N + + T P TG+ + ++++ V LP + C ICLSE+
Sbjct: 202 RRQNAAITARNTTQQPRGVVVTTGLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYA 261
Query: 137 NGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
+ E VR +P+C+H FHV+CID+WL HSSCP CR
Sbjct: 262 SKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 295
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDS---ECVICLSEFTNGEKVRILPKCNHGFHVRCID 157
G+ + ++TFP YS E+ + EC ICL+EF + E +R+LPKC+H FH CI
Sbjct: 95 GLDAETIETFPTFVYS-EVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIG 153
Query: 158 KWLSSHSSCPKCRQCLIE 175
WL H +CP CR L E
Sbjct: 154 AWLQGHVTCPVCRTNLAE 171
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 6/78 (7%)
Query: 99 NTGVKKKALKTFPVVSY---SAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRC 155
++G+ + A+ PV Y + L P +C +CL+EF++ +K+R+LP C+H FH+ C
Sbjct: 178 DSGLDQTAIDALPVFLYGNVTISLEQPF---DCAVCLNEFSDTDKLRLLPVCSHAFHLHC 234
Query: 156 IDKWLSSHSSCPKCRQCL 173
ID WL S+S+CP CR+ L
Sbjct: 235 IDTWLLSNSTCPLCRRSL 252
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 96 RAANTGVKKKALKTFPVVSYS--AELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHV 153
R G+ +A++TFP YS + + EC +CL EF + E +R++P C H FH
Sbjct: 101 RLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHA 160
Query: 154 RCIDKWLSSHSSCPKCRQCLI 174
C+D WLS HS+CP CR L+
Sbjct: 161 DCVDVWLSEHSTCPLCRADLV 181
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 54 IMVLSVL--LCALICSLGL----NSIIRCALRCSNLVVIGDSVTNSPT-RAANTGVKKKA 106
IM LS++ L AL +GL + + ++ + + + SVT+ P+ A G+ +
Sbjct: 244 IMCLSLVGPLTALTFCVGLVMCSSERVSSQIQQAVVARLSGSVTSQPSNEVARIGLDEST 303
Query: 107 LKTFPVVSYSAELNLP--SLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHS 164
++++ V LP S D C ICLSE+ E VR LP+C H FH CID WL HS
Sbjct: 304 IESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHS 363
Query: 165 SCPKCR 170
SCP CR
Sbjct: 364 SCPVCR 369
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 101 GVKKKALKTFPVVSYS--AELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDK 158
G+ K +++FP YS + + EC ICL EF + E +R +P C+H FH CID+
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 159 WLSSHSSCPKCRQCL 173
WLSS S+CP CR L
Sbjct: 151 WLSSRSTCPVCRANL 165
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 55 MVLSVLLCALICSLGLNSIIRCALRCSNLVVIGDSVTNSPTRAANT---GVKKKALKTFP 111
+ SV +C L L +I S+L +G T P + +T G+ K+ + P
Sbjct: 26 FIFSVPICFTFIILFLFYLIYLRRSSSDLSSLGMRTTFIPGNSLSTIELGLSKELREMLP 85
Query: 112 VVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQ 171
+V + + +DS+C +CL ++ +K++ +P C H FH+ CID WL+SH++CP CR
Sbjct: 86 IVVFKESFTV--MDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRL 143
Query: 172 CLI 174
LI
Sbjct: 144 ALI 146
>AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein |
chr3:6614910-6615335 REVERSE LENGTH=141
Length = 141
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 100 TGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKW 159
TG+ L + PVVS++A N + ECV+CLS+F + +K R+LP CNH FH D W
Sbjct: 53 TGINPSVLLSIPVVSFNA--NAFKDNIECVVCLSKFIDEDKARVLPSCNHCFHFDFTDTW 110
Query: 160 LSSHSSCPKCRQ 171
L S +CP CR+
Sbjct: 111 LHSDYTCPNCRK 122
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL 160
G+ +L+ P S+E+ + + C ICL + GE R LPKC+H FH+ C+DKWL
Sbjct: 150 GLSGDSLRKLPCYIMSSEMVRRQV-THCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWL 208
Query: 161 SSHSSCPKCRQCL 173
H SCP CRQ +
Sbjct: 209 IRHGSCPICRQAV 221
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 48 NFDANVIMVLSVLLCALICSLGLNSIIRCALRCSNLVVIGDSVTNSPT--------RAAN 99
NF I V+ +L A + +I+C L + + +S N
Sbjct: 40 NFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPHEVN 99
Query: 100 TGVKKKALKTFPVVSY------SAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHV 153
G+ + A++ PV + + E + EC +CL+EF EK+RI+P C H FH+
Sbjct: 100 RGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHI 159
Query: 154 RCIDKWLSSHSSCPKCRQCLIETCE 178
CID WL +++CP CR + +CE
Sbjct: 160 DCIDIWLQGNANCPLCRTSV--SCE 182
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 107 LKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSC 166
L+ P+ YS + + L+ EC +CLSEF ++ R+LPKC H FHV CID W S SSC
Sbjct: 93 LEKIPIFVYSVKTHESPLE-ECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSC 151
Query: 167 PKCR 170
P CR
Sbjct: 152 PLCR 155
>AT4G17920.1 | Symbols: | RING/U-box superfamily protein |
chr4:9963221-9964090 REVERSE LENGTH=289
Length = 289
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 53 VIMVLSVLLCALICSLGLNSIIRCALRCSNLVVI------GDSVTNSPTRA-----ANTG 101
+ ++L+V+L +G ++ C +V GD+V+++P + N G
Sbjct: 23 LTVILTVILLVFFF-IGFFTLYFCKCFLDTMVQAWRLHHGGDTVSDNPLQQPEAPPVNPG 81
Query: 102 VKKKALKTFPVVSYSA--ELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKW 159
++ + + +FP YS+ +L EC ICL EF +R+L C H FH CID W
Sbjct: 82 LELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDLW 141
Query: 160 LSSHSSCPKCRQCL 173
SH +CP CR+ L
Sbjct: 142 FESHRTCPVCRRDL 155
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 95 TRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVR 154
T NTG+ +++FPV YS+ + +EC ICLSEF++ + VR++ C H FH
Sbjct: 71 TPPENTGLDPFIIRSFPVFHYSSATK-KNHGTECAICLSEFSDEDTVRLITVCRHPFHSN 129
Query: 155 CIDKWLSSHSSCPKCR 170
CID W H +CP CR
Sbjct: 130 CIDLWFELHKTCPVCR 145
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL 160
G+ + + V YS + + ++C +CLSEF E +R+LPKC H FH+ CID WL
Sbjct: 191 GLNPTVISSIKVCQYSKKDGVVE-GTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWL 249
Query: 161 SSHSSCPKCRQCLIET 176
SH++CP CR ++E
Sbjct: 250 RSHTNCPLCRAPIVEA 265
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL 160
G+ + A+ + VV + + +EC +CL+EF E +R+LPKC+H FH+ CID WL
Sbjct: 109 GLHRSAINSITVVGFKKGEGIID-GTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWL 167
Query: 161 SSHSSCPKCR 170
SH +CP CR
Sbjct: 168 LSHKNCPLCR 177
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 93 SPTRAANTGVKKKALKTFPVVSYSAELNL-PSLDS-ECVICLSEFTNGEKVRILPKCNHG 150
SP R G+ +A+K+FP Y+ + P + ECV+CL+EF + E +R++P C H
Sbjct: 49 SPRRPPR-GLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHV 107
Query: 151 FHVRCIDKWLSSHSSCPKCR 170
FH C+D WLS S+CP CR
Sbjct: 108 FHADCVDIWLSHSSTCPICR 127
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 101 GVKKKALKTFPVVSYSAE--LNLPSLDS-------ECVICLSEFTNGEKVRILPKCNHGF 151
G+ +KT P+ YSA P++ +C +CL EF G+ VR LP C H F
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 152 HVRCIDKWLSSHSSCPKCRQCLI 174
H+ CID+WL SH +CP CR ++
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAIL 202
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 101 GVKKKALKTFPVVSYSAE--LNLPSLDS-------ECVICLSEFTNGEKVRILPKCNHGF 151
G+ +KT P+ YSA P++ +C +CL EF G+ VR LP C H F
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 152 HVRCIDKWLSSHSSCPKCRQCLI 174
H+ CID+WL SH +CP CR ++
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAIL 202
>AT5G42200.1 | Symbols: | RING/U-box superfamily protein |
chr5:16860523-16861014 FORWARD LENGTH=163
Length = 163
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 45 GDGNFDANVIMVLSVLLCALICSLGLNSIIRCALRCSNLVVIGDSVTNSPTR-AANTGVK 103
G G A V M L +L C +C + L I L CS I P + G+
Sbjct: 24 GGGTMIATVFMAL-LLPCVGMCIVFL--IYLFLLWCSTRRRIERLRFAEPVKPVTGKGLS 80
Query: 104 KKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSH 163
L+ P ++ EL + + +EC +CL + +G+ R++P CNHGFH C D WLS+H
Sbjct: 81 VLELEKIPKLT-GRELAVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNH 139
Query: 164 SSCPKCR 170
+ CP CR
Sbjct: 140 TVCPVCR 146
>AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein |
chr1:11675531-11676529 FORWARD LENGTH=332
Length = 332
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 79 RCSNLVVIGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNG 138
R SNL+ +N P N G+ K +++FP YS + + +C ICL+EF +
Sbjct: 115 RPSNLI----QPSNPP---ENLGLDSKIIESFPEYPYSVKDHG---TDQCSICLTEFMDD 164
Query: 139 EKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
+ +R++ CNH FH CID W H +CP CR+ L
Sbjct: 165 DTIRLISTCNHSFHTICIDLWFEGHKTCPVCRREL 199
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 101 GVKKKALKTFPVVSYSA--ELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDK 158
G+ ++TFP YS L + EC +CL+EF + E +R++P+C H FH CID
Sbjct: 89 GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDA 148
Query: 159 WLSSHSSCPKCRQCLI 174
WL S ++CP CR L+
Sbjct: 149 WLRSQTTCPLCRANLV 164
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 21/139 (15%)
Query: 53 VIMVLSVLLCALICSLGLNSIIRCALRC--SNLVVIGDSVTNSPTRAA------------ 98
+I++LSV+ ICS+ L+ ++R L+ SNL + +P +
Sbjct: 56 IIVLLSVIF--FICSI-LHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLF 112
Query: 99 ---NTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRC 155
++G+ + + PV Y E+ +C +CL EF+ +K+R+LP C+H FH+ C
Sbjct: 113 HLHDSGLDQALIDALPVFLY-KEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDC 171
Query: 156 IDKWLSSHSSCPKCRQCLI 174
ID WL S+S+CP CR L
Sbjct: 172 IDTWLLSNSTCPLCRGTLF 190
>AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 |
chr5:23676906-23677832 REVERSE LENGTH=308
Length = 308
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 88 DSVTNSPTRAA---NTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRIL 144
D +SP A + G+ + + P+ Y + ECVICL + G+ R L
Sbjct: 95 DDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKL 154
Query: 145 PKCNHGFHVRCIDKWLSSHSSCPKCR 170
C HGFHV CID WLSSHS+CP CR
Sbjct: 155 RNCGHGFHVECIDMWLSSHSTCPLCR 180
>AT2G47560.1 | Symbols: | RING/U-box superfamily protein |
chr2:19511934-19512617 REVERSE LENGTH=227
Length = 227
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 29 NPPASTISHDSEKAYLGDGNFDANVIMVLSVLLCALICSLGLNSIIRCALRCSNLVVIGD 88
P ++SH S Y +G + ++VL V + ++C +S R R N +
Sbjct: 9 KPIWGSVSHTS-SGYALNGKIMLSSVIVLFVAVIMILC---FHSYARWLFRRHNRRIRRR 64
Query: 89 SVTNSPTRAA---NTGVKKKALKTFPVVSYSAE-LNLPSLDSECVICLSEFTNGEKVRIL 144
++ T +A + + + L P+ YS++ P EC +CLSEF ++ R+L
Sbjct: 65 IRSHLRTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLL 124
Query: 145 PKCNHGFHVRCIDKWLSSHSSCPKCR 170
PKC H FHV CID W S S+CP CR
Sbjct: 125 PKCGHSFHVDCIDTWFRSRSTCPLCR 150
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 33/46 (71%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
C +CL +F GE VR LP C+H FH+ CIDKWL H+SCP CR+ L
Sbjct: 176 CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 221
>AT2G46493.1 | Symbols: | RING/U-box superfamily protein |
chr2:19080254-19081242 REVERSE LENGTH=184
Length = 184
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 98 ANTGVKKKALKTFPVVSYSAELNLPSLDS-ECVICLSEFTNGEKVRILPKCNHGFHVRCI 156
A G+ + ++TF + L + C ICLSE+ + E VR +P+C+H FHV CI
Sbjct: 107 ARRGLDQSTIETFKKMELGESRRLSGTNGIVCPICLSEYASKETVRFIPECDHCFHVECI 166
Query: 157 DKWLSSHSSCPKCR 170
D WL H SCP CR
Sbjct: 167 DVWLKIHGSCPLCR 180
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 33/46 (71%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
C +CL +F GE VR LP C+H FH+ CIDKWL H+SCP CR+ L
Sbjct: 200 CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 245
>AT3G11110.1 | Symbols: | RING/U-box superfamily protein |
chr3:3479979-3480455 FORWARD LENGTH=158
Length = 158
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 5/145 (3%)
Query: 29 NPPASTISHDSEKAYLGDGNFDAN---VIMVLSVLLCALICSLGLNSIIRCALRCSNLVV 85
+P AS + + E Y D NF + + L++ L +L I R L + +
Sbjct: 7 SPQASMLLYWHENQY-DDRNFQIHGRTLFFALALFSVVLFFALLTLYIHRNCLP-RDSIN 64
Query: 86 IGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILP 145
+ S + TR + G+ +++ PVV E + EC ICL F GEK+++LP
Sbjct: 65 LHASSPDRLTRCRSGGLDPAEIRSLPVVLCRRERAEEEEEKECCICLGGFEEGEKMKVLP 124
Query: 146 KCNHGFHVRCIDKWLSSHSSCPKCR 170
C+H +H C+D+WL + SSCP CR
Sbjct: 125 PCSHCYHCECVDRWLKTESSCPLCR 149
>AT5G40250.1 | Symbols: | RING/U-box superfamily protein |
chr5:16086056-16087186 FORWARD LENGTH=376
Length = 376
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 127 ECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLI 174
+C +CL EF+ +K+R+LP C+H FH+ CID WL S+S+CP CR L
Sbjct: 142 DCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLF 189
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 126 SECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
EC +CLSEF + EK+RI+P C+H FH+ CID WL ++++CP CR
Sbjct: 136 QECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCR 180
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 97 AANTGVKKKALKTFPVVSYSAELNLPSLDSE--CVICLSEFTNGEKVRILPKCNHGFHVR 154
+ G+ + P + + + NL + ++ C +CL +F GE VR LP C+H FH+
Sbjct: 158 GGSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLP 217
Query: 155 CIDKWLSSHSSCPKCRQCL 173
CID WL H SCP CR+ L
Sbjct: 218 CIDNWLFRHGSCPMCRRDL 236
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL 160
G+ + ++++P + YS E P+ S C ICL ++ +R LP CNH FH++CID WL
Sbjct: 121 GLDEDTIQSYPKILYS-EAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWL 179
Query: 161 SSHSSCPKCRQCLIET 176
+ +CP CR + T
Sbjct: 180 RLNPTCPVCRTSPLPT 195
>AT5G07040.1 | Symbols: | RING/U-box superfamily protein |
chr5:2190344-2190823 FORWARD LENGTH=159
Length = 159
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 88 DSVTNSPTRAANT--GVKKKALKTFPVVSYSAELNLPSLDS-ECVICLSEFTNGEKVRIL 144
D V + P+ AA G+ + ++++P + LP ++ C ICL ++ E VR +
Sbjct: 51 DVVLDLPSPAAEVKLGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCI 110
Query: 145 PKCNHGFHVRCIDKWLSSHSSCPKCRQ 171
P+CNH FH C+D+WL + ++CP CR
Sbjct: 111 PECNHCFHTDCVDEWLRTSATCPLCRN 137
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDSE------CVICLSEFTNGEKVRILPKCNHGFHVR 154
G+ ++ +K FP + Y SL E C ICL+++ + +R+LP CNH FH
Sbjct: 96 GLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDN 155
Query: 155 CIDKWLSSHSSCPKCR 170
C+D WL H +CP CR
Sbjct: 156 CVDPWLRLHPTCPVCR 171
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 90 VTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNH 149
N P R +K+A++ P V L +C +CL +F G + + +P C H
Sbjct: 228 AENDPNRQGTPPARKEAVEALPTVKIMEPL-------QCSVCLDDFEKGTEAKEMP-CKH 279
Query: 150 GFHVRCIDKWLSSHSSCPKCR 170
FHVRCI WL HSSCP CR
Sbjct: 280 KFHVRCIVPWLELHSSCPVCR 300
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 33/47 (70%)
Query: 125 DSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQ 171
D+ C ICLSE+T+ E V+ LP+C H FH CID WL H+SCP CR
Sbjct: 261 DTLCPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCRN 307
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLD-SECVICLSEFTNGEKVRILPKCNHGFHVRCIDKW 159
G+ ++++P + LP +D + C ICLSE+ E +R +P+C H FH CID+W
Sbjct: 302 GLDGPTIESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEW 361
Query: 160 LSSHSSCPKCR 170
L + +CP CR
Sbjct: 362 LKLNGTCPVCR 372
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 97 AANTGVKKKALKTFPVVSYS--AELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVR 154
A G+ + + +FP YS E + EC +C+ EF + E +R++P+C H FH
Sbjct: 63 TAVRGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHAD 122
Query: 155 CIDKWLSSHSSCPKCR 170
C+ WLS HS+CP CR
Sbjct: 123 CVSVWLSDHSTCPLCR 138
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 88 DSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDS--ECVICLSEFTNGEKVRILP 145
D T+ + G+ ++ P ++ + N + ++ C +CL +F GE VR LP
Sbjct: 154 DDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLP 213
Query: 146 KCNHGFHVRCIDKWLSSHSSCPKCRQ 171
C+H FH+ CID WL H SCP CR+
Sbjct: 214 HCHHMFHLPCIDNWLLRHGSCPMCRR 239
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 96 RAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRC 155
+ ++ G+ + +K P +S +S+CV+C F G+ R LP C H FH +C
Sbjct: 78 QESSDGLSSRFVKKLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKC 137
Query: 156 IDKWLSSHSSCPKCR 170
+D WL S+CP CR
Sbjct: 138 VDTWLLKASTCPICR 152
>AT2G46495.1 | Symbols: | RING/U-box superfamily protein |
chr2:19084134-19085704 REVERSE LENGTH=372
Length = 372
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 100 TGVKKKALKTFPVVSYSAELNLPSLDSE--CVICLSEFTNGEKVRILPKCNHGFHVRCID 157
TG+ + ++++ LP + + C ICLSE+ + E VR +P+C+H FH CID
Sbjct: 290 TGLDESIIESYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCFHSECID 349
Query: 158 KWLSSHSSCPKCR 170
WL H SCP CR
Sbjct: 350 VWLKIHGSCPLCR 362
>AT2G46494.1 | Symbols: | RING/U-box superfamily protein |
chr2:19082344-19083811 REVERSE LENGTH=362
Length = 362
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 98 ANTGVKKKALKTFPVVSYSAELNLPSLDS-ECVICLSEFTNGEKVRILPKCNHGFHVRCI 156
A G+ + ++ + + P + C ICLSE+ + E VR +P+C+H FH +CI
Sbjct: 285 ATRGLDQSTIEKYKTMELGESRRPPGTNGIVCPICLSEYVSKETVRFIPECDHCFHAKCI 344
Query: 157 DKWLSSHSSCPKCR 170
D WL H SCP CR
Sbjct: 345 DVWLKIHGSCPLCR 358
>AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B |
chr4:6906066-6906539 FORWARD LENGTH=157
Length = 157
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 92 NSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGF 151
+ PTR A + A + PVV +S L P + C +CLS+F + +K+R LPKC H F
Sbjct: 51 SDPTRLALSTSATLANELIPVVRFSDLLTDP--EDCCTVCLSDFVSDDKIRQLPKCGHVF 108
Query: 152 HVRCIDKWL--SSHSSCPKCRQ 171
H RC+D+W+ + +CP CR
Sbjct: 109 HHRCLDRWIVDCNKITCPICRN 130
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 85 VIGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRIL 144
+I N P R K A+ P V + ++ L S ++C +C+ EF +G V+ +
Sbjct: 174 LIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDM-LKSEMNQCAVCMDEFEDGSDVKQM 232
Query: 145 PKCNHGFHVRCIDKWLSSHSSCPKCR 170
P C H FH C+ WL H+SCP CR
Sbjct: 233 P-CKHVFHQDCLLPWLELHNSCPVCR 257
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 38 DSEKAYLGDGNFDANVIMVLSV---LLCALICSLGLNSIIRCALRCSNLVVIGDSVT-NS 93
D + +D N ++L+ L ++ L+ R LR G V
Sbjct: 14 DHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRRRREAFRGLPVIFRH 73
Query: 94 PTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHV 153
P G+ + + P + A + + +EC +CLS +K R LP C H FHV
Sbjct: 74 PFEMPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHV 133
Query: 154 RCIDKWLSSHSSCPKCR 170
C+D WL++ S+CP CR
Sbjct: 134 DCVDTWLTTCSTCPVCR 150
>AT2G46160.1 | Symbols: | RING/U-box superfamily protein |
chr2:18963109-18963753 FORWARD LENGTH=214
Length = 214
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 101 GVKKKALKTFPVVSYSAELNLPS-------LDSECVICLSEFTNGEKVRILPKCNHGFHV 153
G+ + + ++P +S + + S D+ C ICL E+ E +R++P+C H FH+
Sbjct: 104 GLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHYFHL 163
Query: 154 RCIDKWLSSHSSCPKCRQ 171
C+D WL + SCP CR
Sbjct: 164 CCLDAWLKLNGSCPVCRN 181
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 92 NSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGF 151
N R + +K+ + P V S L +C ICL +F G + + +P C H F
Sbjct: 212 NDSIRHGSLPARKEVVDNLPTVKISESL-------QCSICLDDFDKGSEAKEMP-CKHKF 263
Query: 152 HVRCIDKWLSSHSSCPKCR 170
H+RCI WL HSSCP CR
Sbjct: 264 HIRCIVPWLELHSSCPVCR 282
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 92 NSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGF 151
N R + +K+ + P V S L +C ICL +F G + + +P C H F
Sbjct: 212 NDSIRHGSLPARKEVVDNLPTVKISESL-------QCSICLDDFDKGSEAKEMP-CKHKF 263
Query: 152 HVRCIDKWLSSHSSCPKCR 170
H+RCI WL HSSCP CR
Sbjct: 264 HIRCIVPWLELHSSCPVCR 282
>AT2G34000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14365177-14365632 FORWARD LENGTH=151
Length = 151
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDS---ECVICLSEFTNGEKVRILPKCNHGFHVRCID 157
G+ + FP SY + N P ++ EC +CL +++LP C H F CI
Sbjct: 61 GLSASVIAAFPTFSYKPDNNDPESNNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIG 120
Query: 158 KWLSSHSSCPKCRQ 171
KWL SH++CP CR+
Sbjct: 121 KWLESHATCPVCRR 134
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 126 SECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
EC+ICL EF G +VR LP C H FHV CID+WL + CP+CR
Sbjct: 233 GECLICLEEFHIGHEVRGLP-CAHNFHVECIDQWLRLNVKCPRCR 276
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 123 SLDS-ECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIET 176
SL+S EC ICLS + E+ R+ P C H +H CID WL +H +CP CR+ L E+
Sbjct: 124 SLESRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCRKDLPES 178
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 73 IIRCALRCSN------------LVVIGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELN 120
++RC RCS+ V DS S R + + L + P+ +S+
Sbjct: 48 LLRCLNRCSHRSVLPLSSSSSVATVTSDSRRFSGHRVSPETERSSVLDSLPIFKFSSVTR 107
Query: 121 LPSL--DSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLI 174
S +C +CLS+F +++R+LP C H FH CID WL S+ +CP CR L
Sbjct: 108 RSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLF 163
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 118 ELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
E +L D+EC ICL E+ +G ++R LP CNH FH CIDKWL +S CP C+
Sbjct: 328 ERSLSPEDAECCICLCEYEDGVELRELP-CNHHFHCTCIDKWLHINSRCPLCK 379
>AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:13163041-13164484 REVERSE
LENGTH=318
Length = 318
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 104 KKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSS- 162
+ L++ P YS L S C IC+ ++ GEK+RILP C H +H CID WL
Sbjct: 209 RDLLQSMPTEVYSGVLEESSTSVTCAICIDDYCVGEKLRILP-CKHKYHAVCIDSWLGRC 267
Query: 163 HSSCPKCRQ 171
S CP C+Q
Sbjct: 268 RSFCPVCKQ 276
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 91 TNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHG 150
TN + G+ + P+ E L D+EC ICLS + +G ++R LP C H
Sbjct: 250 TNDEAQGTTEGIMTECGTDSPI-----EHTLLQEDAECCICLSAYEDGTELRELP-CGHH 303
Query: 151 FHVRCIDKWLSSHSSCPKCR 170
FH C+DKWL +++CP C+
Sbjct: 304 FHCSCVDKWLYINATCPLCK 323
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 126 SECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
+EC +CLS + R+LP C H FHV C+D WL++ S+CP CR
Sbjct: 98 TECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCR 142
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 104 KKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSH 163
K ++ P+V + + ECVICL E+ + E V+ +P C H FH CI+KWL H
Sbjct: 95 KASIDAMPIVE------IDGCEGECVICLEEWKSEETVKEMP-CKHRFHGGCIEKWLGFH 147
Query: 164 SSCPKCR 170
SCP CR
Sbjct: 148 GSCPVCR 154
>AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A |
chr4:6907777-6908256 FORWARD LENGTH=159
Length = 159
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 91 TNSP--TRAANTGVKKKALKTFPVVSYSAELNLPSLDSE--CVICLSEFTNGEKVRILPK 146
T++P TR A + A + PVV +S +LP+ D E C +CLS+F + +KVR LPK
Sbjct: 49 TSAPDLTRHALSTSASLANELIPVVRFS---DLPT-DPEDCCTVCLSDFESDDKVRQLPK 104
Query: 147 CNHGFHVRCIDKWLSSHS--SCPKCRQ 171
C H FH C+D+W+ ++ CP CR
Sbjct: 105 CGHVFHHYCLDRWIVDYNKMKCPVCRH 131
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 91 TNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHG 150
TN + G+ + P+ E L D+EC ICLS + +G ++R LP C H
Sbjct: 321 TNDEAQGTTEGIMTECGTDSPI-----EHTLLQEDAECCICLSAYEDGTELRELP-CGHH 374
Query: 151 FHVRCIDKWLSSHSSCPKCRQCLIET 176
FH C+DKWL +++CP C+ ++++
Sbjct: 375 FHCSCVDKWLYINATCPLCKYNILKS 400
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL 160
G+ K +++ P+ +E S C ICL ++ GE R L +C H FH+ CID+WL
Sbjct: 147 GLSKSSIQNIPMFYNRSE---HQTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWL 203
Query: 161 SSHSSCPKCRQCL 173
+CP CR L
Sbjct: 204 LRQETCPICRDHL 216
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 95 TRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVR 154
TR + A+ P + A+ +L S DS C +C EF G + + +P CNH +H
Sbjct: 158 TRRGPPPAPRSAIDALPTIKI-AQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSD 215
Query: 155 CIDKWLSSHSSCPKCRQCL 173
CI WL H+SCP CRQ L
Sbjct: 216 CIVPWLVQHNSCPVCRQEL 234
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 95 TRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVR 154
TR + A+ P + A+ +L S DS C +C EF G + + +P CNH +H
Sbjct: 158 TRRGPPPAPRSAIDALPTIKI-AQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSD 215
Query: 155 CIDKWLSSHSSCPKCRQCL 173
CI WL H+SCP CRQ L
Sbjct: 216 CIVPWLVQHNSCPVCRQEL 234
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 95 TRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVR 154
TR + A+ P + A+ +L S DS C +C EF G + + +P CNH +H
Sbjct: 158 TRRGPPPAPRSAIDALPTIKI-AQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSD 215
Query: 155 CIDKWLSSHSSCPKCRQCL 173
CI WL H+SCP CRQ L
Sbjct: 216 CIVPWLVQHNSCPVCRQEL 234
>AT3G61550.1 | Symbols: | RING/U-box superfamily protein |
chr3:22776444-22777082 FORWARD LENGTH=212
Length = 212
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 125 DSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQ 171
++ C ICL E+ E +R++P+C H FHV C+D WL + SCP CR
Sbjct: 133 ETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRN 179
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 115 YSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
+ + + + +EC +CL FT+ +++R L +C H FHV CI+ WL H +CP CR
Sbjct: 129 FHKDTHSKEIGNECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICR 184
>AT5G46650.1 | Symbols: | RING/U-box superfamily protein |
chr5:18930443-18931312 FORWARD LENGTH=289
Length = 289
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 99 NTGVKKKALKTFPVVSYSA--ELNLPSLDSECVICLSEFTNGE-KVRILPKCNHGFHVRC 155
N G++ ++++P+ +S+ +L EC ICL EF +R+L C H FH C
Sbjct: 83 NPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQEC 142
Query: 156 IDKWLSSHSSCPKCRQCL 173
ID+WL S+ +CP CR+ L
Sbjct: 143 IDQWLESNKTCPVCRRNL 160
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 127 ECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
ECVIC E++ + LP C H +H+ C++KWL H+SCP+CR L
Sbjct: 480 ECVICFEEWSKSDMETELP-CKHKYHLECVEKWLKIHTSCPQCRYKL 525
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 125 DSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
D EC ICL+++ E+VR LP C+H FH++C+D+WL S CP C+Q L
Sbjct: 286 DPECCICLAKYKEKEEVRKLP-CSHRFHLKCVDQWLRIISCCPLCKQDL 333
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 125 DSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
D EC ICL+++ E+VR LP C+H FH++C+D+WL S CP C+Q L
Sbjct: 286 DPECCICLAKYKEKEEVRKLP-CSHRFHLKCVDQWLRIISCCPLCKQDL 333
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 125 DSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
D EC ICL+++ + E+VR LP C+H FH +C+D+WL S CP C+Q L
Sbjct: 294 DPECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCKQDL 341
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 125 DSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
D EC ICL+++ + E+VR LP C+H FH +C+D+WL S CP C+Q L
Sbjct: 294 DPECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCKQDL 341
>AT4G30370.1 | Symbols: | RING/U-box superfamily protein |
chr4:14858743-14859273 REVERSE LENGTH=176
Length = 176
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL 160
G+ + +K P Y E + +CV+C+ F G+ R LP+C H FH +C+D WL
Sbjct: 89 GLSPRCVKRLPQFKY-CEPSSEYGGDDCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWL 147
Query: 161 SSHSSCPKCR 170
S+CP CR
Sbjct: 148 IKVSTCPICR 157
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 86 IGDS----VTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKV 141
+GD+ V + + GV + PV E LP D+EC ICLS + + ++
Sbjct: 284 VGDTMKHTVDEEQGQGDSGGVMTECGTDSPV-----EHALPHEDAECCICLSAYEDETEL 338
Query: 142 RILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
R LP C H FH C+DKWL +++CP C+
Sbjct: 339 RELP-CGHHFHCGCVDKWLYINATCPLCK 366
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL 160
G+ ++ +K P V+++ + C ICL ++ G+K+R+LP C+H FHV C+D WL
Sbjct: 205 GMCRRTVKAMPSVTFTCAKIDNTTGFSCAICLEDYIVGDKLRVLP-CSHKFHVACVDSWL 263
Query: 161 -SSHSSCPKCRQ 171
S + CP C++
Sbjct: 264 ISWRTFCPVCKR 275
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 92 NSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGF 151
N P R KK+A++ V L +C +CL +F G + +++P C H F
Sbjct: 194 NDPNRYGTPPAKKEAVEALATVKIEETL-------QCSVCLDDFEIGTEAKLMP-CTHKF 245
Query: 152 HVRCIDKWLSSHSSCPKCRQCL 173
H C+ WL HSSCP CR L
Sbjct: 246 HSDCLLPWLELHSSCPVCRYQL 267
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 125 DSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIET 176
D+ C ICL+ + + E+VR LP C+H FHV C+DKWL +++CP C+ + E+
Sbjct: 352 DASCCICLTRYGDDEQVRELP-CSHVFHVDCVDKWLKINATCPLCKNEVGES 402
>AT1G35625.1 | Symbols: | RING/U-box superfamily protein |
chr1:13158466-13159260 REVERSE LENGTH=201
Length = 201
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 98 ANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCID 157
++ + K L++ P Y+ L S C IC+ ++ GE +RILP C H +H CID
Sbjct: 86 GHSRMPKDLLQSMPTEVYTGVLEEGSTSVTCAICIDDYRVGEILRILP-CKHKYHAVCID 144
Query: 158 KWLSS-HSSCPKCRQ 171
WL S CP C+Q
Sbjct: 145 SWLGRCRSFCPVCKQ 159
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 125 DSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
D+ C ICL+++ N E++R LP C+H FH C+DKWL ++SCP C+
Sbjct: 360 DAVCCICLAKYANNEELRELP-CSHFFHKECVDKWLKINASCPLCK 404
>AT3G60966.1 | Symbols: | RING/U-box superfamily protein |
chr3:22552718-22553137 FORWARD LENGTH=139
Length = 139
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 26/43 (60%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
C +CL E GEK+R L C H FH CID WLS S CP CR
Sbjct: 62 CAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCR 104
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL 160
G+ ++ +K P + +S+ + C ICL ++T G+K+R+LP C H FH C+D WL
Sbjct: 205 GMSRRLVKAMPSLIFSSFHEDNTTAFTCAICLEDYTVGDKLRLLP-CCHKFHAACVDSWL 263
Query: 161 SSHSS-CPKCRQ 171
+S + CP C++
Sbjct: 264 TSWRTFCPVCKR 275
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 101 GVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL 160
VK + VV ++ EL + DS C +CL EF E++ +P C H FH+ CI WL
Sbjct: 80 DVKVELKDKLHVVLFNEELG--TRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWL 137
Query: 161 SSHSSCPKCR 170
SH++CP CR
Sbjct: 138 YSHNTCPLCR 147
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 11 LLHDLLEGFHSRRLLLQANPPASTISH---DSEKAYLGDGNFDAN------VIMVLSVLL 61
L+ D E H + + QA S + + +S + YL +G+ + +V L+
Sbjct: 91 LVSDASEKKHLKSCVAQAKEQLSEVDNQPTESSQGYLFEGHLTVDREPPQPQWLVQQNLM 150
Query: 62 CALICSLG--------LNSIIRCALRCSNLV-----VIGDSVTNS-PTRAANTGVKKKAL 107
A +G N+I A L+ +I D + + P RA K+ +
Sbjct: 151 SAFASIVGGESSNGPTENTIGETANLMQELINGLDMIIPDILDDGGPPRAPPAS--KEVV 208
Query: 108 KTFPVVSYSAEL-NLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSC 166
+ PV+ ++ EL ++EC IC G+K++ LP C H FH C+ WL H+SC
Sbjct: 209 EKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELP-CKHTFHPPCLKPWLDEHNSC 267
Query: 167 PKCRQCL 173
P CR L
Sbjct: 268 PICRHEL 274
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 27/43 (62%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
C ICL T GEK+R + C+H FHV CID WL S CP CR
Sbjct: 70 CTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCR 112
>AT5G41400.1 | Symbols: | RING/U-box superfamily protein |
chr5:16569584-16570114 REVERSE LENGTH=176
Length = 176
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 104 KKALKTFPVVSYSAELNLPSLDSE---CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL 160
+ A + PV+ +S EL P S C +CL EF N +++R L C H FH C+D+W+
Sbjct: 79 RLAGEILPVIRFS-ELTRPGFGSGSDCCAVCLHEFENDDEIRRLTNCQHIFHRSCLDRWM 137
Query: 161 SSHS--SCPKCRQCLI 174
++ +CP CR I
Sbjct: 138 MGYNQMTCPLCRTPFI 153
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
C ICL + GEK+R + C+H FHV CID WL S+CP CR
Sbjct: 70 CTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCR 112
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 116 SAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIE 175
+ E L + D++C ICLS + +G ++ LP CNH FH CI KWL ++CP C+ +++
Sbjct: 295 ATERTLLAEDADCCICLSSYEDGAELHALP-CNHHFHSTCIVKWLKMRATCPLCKYNILK 353
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 118 ELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETC 177
E L S D+EC ICL + +G ++R LP C H FH C+DKWL +++CP C+ +++
Sbjct: 313 ERMLLSEDAECSICLCAYEDGVELRELP-CRHHFHSLCVDKWLRINATCPLCKFNILKNG 371
Query: 178 E 178
E
Sbjct: 372 E 372
>AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2 |
chr3:22741701-22742213 REVERSE LENGTH=170
Length = 170
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 89 SVTNSPTRAANTGVKKKAL---KTFPVVSYSAELNL-PSLDSECVICLSEFTNGEKVRIL 144
T+ PTR T AL + PV+ + N L C +CL EF +++R L
Sbjct: 51 DYTSYPTRIPETRSPFSALLIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWL 110
Query: 145 PKCNHGFHVRCIDKWLS-SHSSCPKCR 170
C H FH C+D+W+ +CP CR
Sbjct: 111 RNCRHIFHRSCLDRWMDHDQKTCPLCR 137
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 102 VKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLS 161
+ K + T P +++ + + ++ C ICL ++ GE +R+LP C H FH+ CID WL+
Sbjct: 207 LDAKLVHTLPCFTFTDSAHHKAGET-CAICLEDYRFGESLRLLP-CQHAFHLNCIDSWLT 264
Query: 162 SH-SSCPKCRQ 171
+SCP C+
Sbjct: 265 KWGTSCPVCKH 275
>AT2G44330.1 | Symbols: | RING/U-box superfamily protein |
chr2:18310621-18311163 FORWARD LENGTH=180
Length = 180
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
C IC +F GE R LP CNH +H CI WL+SH+SCP CR
Sbjct: 96 CAICREDFVVGESARRLP-CNHLYHNDCIIPWLTSHNSCPLCR 137
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 105 KALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSH- 163
K + T P +++ + + ++ C ICL ++ GE +R+LP C H FH+ CID WL+
Sbjct: 210 KLVHTLPCFTFTDSAHHKAGET-CAICLEDYRFGESLRLLP-CQHAFHLNCIDSWLTKWG 267
Query: 164 SSCPKCRQ 171
+SCP C+
Sbjct: 268 TSCPVCKH 275
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 126 SECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSS-HSSCPKCR 170
S+C ICL E+ + +R LP C+H FH C+DKWL H CP CR
Sbjct: 488 SQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIHRVCPLCR 532
>AT1G51930.1 | Symbols: | RING/U-box superfamily protein |
chr1:19294838-19295236 REVERSE LENGTH=132
Length = 132
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQ 171
C ICL E+ + ++R L C H FH+ CID WL+ +CP CR+
Sbjct: 80 CPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCRR 123
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
C ICL E++ G+ +P C H FH +C+++WL H++CP CR
Sbjct: 109 CAICLDEWSKGDVAAEMP-CKHKFHSKCVEEWLGRHATCPMCR 150
>AT1G63840.1 | Symbols: | RING/U-box superfamily protein |
chr1:23689991-23690491 REVERSE LENGTH=166
Length = 166
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 94 PTRAANTGVKKKALKTFPVVSYSAELNLPSLDSEC-VICLSEFTNGEKVRILPKCNHGFH 152
PT A + PVV +S ++N P +SEC +CL +F N +++R L C H FH
Sbjct: 57 PTLTKPDSAAILAGEMLPVVRFS-DINRP--ESECCAVCLYDFENDDEIRRLTNCRHIFH 113
Query: 153 VRCIDKWLSSHS--SCPKCRQCLI 174
C+D+W+ ++ +CP CR I
Sbjct: 114 RGCLDRWMMGYNQMTCPLCRTQFI 137
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 84 VVIGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRI 143
+V+G+S +S TR N G + PVV ++AE + C IC E E++
Sbjct: 61 LVLGNS--SSCTRWLNAG------EELPVVEFTAEEMMERGLVVCAICREELAANERLSE 112
Query: 144 LPKCNHGFHVRCIDKWLSSHSSCPKCRQ 171
LP C H +H CI WLS+ ++CP CR
Sbjct: 113 LP-CRHYYHKECISNWLSNRNTCPLCRH 139
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 108 KTFPVVSYSAELN-----LPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSS 162
K PV + S L LP D++C ICLS + +G ++ LP CNH FH CI KWL
Sbjct: 268 KMIPVDAASENLGNERVLLPE-DADCCICLSSYEDGAELVSLP-CNHHFHSTCIVKWLKM 325
Query: 163 HSSCPKCRQCLIETCEK 179
+++CP C+ +++ E+
Sbjct: 326 NATCPLCKFNILKGNEQ 342
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSS-CPKCRQ 171
C ICL + G+K+RILP C+H FHV C+D WL S CP C++
Sbjct: 234 CCICLENYEKGDKLRILP-CHHKFHVACVDLWLGQRKSFCPVCKR 277
>AT2G28920.1 | Symbols: | RING/U-box superfamily protein |
chr2:12418017-12418454 FORWARD LENGTH=145
Length = 145
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
CVICL +F + VR+L +C H FHV CID W +CP CR
Sbjct: 93 CVICLEDFKVNDVVRVLVRCKHVFHVDCIDSWCFYKLTCPICR 135
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 93 SPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFH 152
+PT A+ VK A K + ++ S C+ICL EF+ G +V LP C H F
Sbjct: 31 NPTPASKLVVKSLARKIY-------KMTTSSTGEMCIICLEEFSEGRRVVTLP-CGHDFD 82
Query: 153 VRCIDKWLSSHSSCPKCR 170
C+ KW ++ SCP CR
Sbjct: 83 DECVLKWFETNHSCPLCR 100
>AT5G41430.1 | Symbols: | RING/U-box superfamily protein |
chr5:16586119-16586604 REVERSE LENGTH=161
Length = 161
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
C ICL E +G ++ + KC H FH CID WL + SCP CR
Sbjct: 117 CSICLEELEDGHEIIRIKKCRHVFHRSCIDSWLKQNRSCPNCR 159
>AT3G60080.1 | Symbols: | RING/U-box superfamily protein |
chr3:22187635-22188555 FORWARD LENGTH=306
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 107 LKTFPVVSYSAELNLPSLDSE------CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL 160
+ + P + S+ L + DS+ C +C +F GE R LP C+H +H CI WL
Sbjct: 142 IDSIPTIQISSSLLCSTDDSDPDSVLLCAVCKEDFIIGESARRLP-CSHIYHSDCIVPWL 200
Query: 161 SSHSSCPKCRQCLIETCEKIVGA 183
S H+SCP CR L T + +G
Sbjct: 201 SDHNSCPLCRFELPTTAKVGIGG 223
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 100 TGVKKKALKT-FPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDK 158
TGV ++ + Y + P C +C E+T GE + L +C H FH +CI +
Sbjct: 608 TGVNEETISNRLKQRKYKSNTKSPQDAEPCCVCQEEYTEGEDMGTL-ECGHEFHSQCIKE 666
Query: 159 WLSSHSSCPKCRQCLIETCEK 179
WL + CP C+ + T +K
Sbjct: 667 WLKQKNLCPICKTTGLNTAKK 687
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 47/210 (22%)
Query: 2 DSSTSFTSPLLHDLLEGFHSRRLLLQANPPASTISHDSEKAYLGDG-------------- 47
++S + SP+ +L GF L S +SHDS ++Y DG
Sbjct: 303 ETSNNLNSPVSLELFSGFPEFGL------SGSLLSHDSFRSYNLDGISEILPELDRIEQD 356
Query: 48 ---NFDANVIMVLSVLLCAL------------ICSLGLNSIIRCALRCSNLVVIGDSVTN 92
N++ +IM +LL L I ++ ++ R IG +V+
Sbjct: 357 IELNYEDLLIMETGLLLGGLSFHDQHRDMRLDIDNMSYEELLALEER------IG-TVST 409
Query: 93 SPTRAANTGVKKKALKTFPVVSYSAELNLPS---LDSECVICLSEFTNGEKVRILPKCNH 149
+ T A + K ++ +SY + PS D++C IC E+T G++V L C H
Sbjct: 410 ALTEEAISKCLKTSIYQMKPLSYGSITKSPSDNKEDAKCSICQEEYTIGDEVGRL-HCEH 468
Query: 150 GFHVRCIDKWLSSHSSCPKCRQCLIETCEK 179
+HV+C+ +WL S CP C+ ET K
Sbjct: 469 TYHVKCVQEWLRIKSWCPICK-ATAETSSK 497
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
C +CL + T GE VR LP C H FH CID WL +CP C+
Sbjct: 211 CSVCLEQVTVGEIVRTLP-CLHQFHAGCIDPWLRQQGTCPVCK 252
>AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705436 FORWARD LENGTH=253
Length = 253
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSH--SSCPKCRQC 172
C +CL +F GE VR LP C+H FH+ CID WL H S+ R C
Sbjct: 196 CSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHDISTARTSRVC 242
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 126 SECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSS-HSS-CPKCR 170
S+C ICL E+ + +R LP C+H FH C+DKWL HS CP CR
Sbjct: 488 SQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIHSRVCPLCR 533
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 17/101 (16%)
Query: 77 ALRCSNLVVIGDSVTNSPTRAANTGVKKKAL-----KTFPVVSYSAELNLPSLDSECVIC 131
++ L+ +GD + NTG+K+ + K P VS++ +D +C IC
Sbjct: 275 SMSYEQLLELGDRIG-----YVNTGLKESEIHRCLGKIKPSVSHTL------VDRKCSIC 323
Query: 132 LSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQC 172
E+ ++V L C H FHV C+ +WLS ++CP C++
Sbjct: 324 QDEYEREDEVGEL-NCGHSFHVHCVKQWLSRKNACPVCKKA 363
>AT3G16090.1 | Symbols: | RING/U-box superfamily protein |
chr3:5456513-5458694 FORWARD LENGTH=492
Length = 492
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 120 NLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLI 174
L + D+ C+IC E TN +K+ C H FHV C+ WL +CP CR ++
Sbjct: 284 ELTASDATCIICREEMTNAKKL----ICGHLFHVHCLRSWLERQQTCPTCRALVV 334
>AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A |
chr1:5193703-5194170 REVERSE LENGTH=155
Length = 155
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 126 SECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHS-SCPKCRQCLI 174
S+CV+CLS+ GE+VR L +C H FH +C++ WL + +CP CR L+
Sbjct: 84 SDCVVCLSKLKEGEEVRKL-ECRHVFHKKCLEGWLHQFNFTCPLCRSALV 132
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 83 LVVIGDSVTN-----SPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTN 137
L +GDSV + S R + K KT + + DS+C ICL E+
Sbjct: 184 LTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMKKKFVADDSQCSICLMEYAK 243
Query: 138 GEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
G+K+ LP C H +H CI +WL + C C+
Sbjct: 244 GDKITTLP-CKHIYHKDCISQWLKQNKVCCICK 275
>AT1G65040.2 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=460
Length = 460
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 120 NLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLI 174
L S D+ C+IC E T+ +K+ C H FHV C+ WL ++CP CR ++
Sbjct: 284 ELSSNDATCIICREEMTSAKKL----VCGHLFHVHCLRSWLERQNTCPTCRALVV 334
>AT5G41450.1 | Symbols: | RING/U-box superfamily protein |
chr5:16588600-16589094 REVERSE LENGTH=164
Length = 164
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
C ICL EF +G ++ + C H FH CID WL+ + +CP CR
Sbjct: 110 CPICLEEFEDGHEIIRINMCRHVFHRFCIDPWLNQNLTCPNCR 152
>AT5G20885.1 | Symbols: | RING/U-box superfamily protein |
chr5:7084133-7084663 REVERSE LENGTH=176
Length = 176
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 116 SAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL--------------- 160
+AE + ++ C +CL + +G++VR L C+H FH CID+WL
Sbjct: 70 AAERSPAMINDTCAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLDYECCGGDENNEGEE 129
Query: 161 SSHSSCPKCRQCLI 174
+H +CP CR L+
Sbjct: 130 DNHRTCPLCRTPLL 143
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 120 NLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLI 174
L S D+ C+IC E T+ +K+ C H FHV C+ WL ++CP CR ++
Sbjct: 213 ELSSNDATCIICREEMTSAKKL----VCGHLFHVHCLRSWLERQNTCPTCRALVV 263
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 84 VVIGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRI 143
++G + N K ++ PVV + E L ++ C +C E EKVR
Sbjct: 292 AILGQMFDDETGIRGNPPAAKSVIQDLPVVELAVE-ELDKGNNVCAVCKDEMLVEEKVRR 350
Query: 144 LPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
LP C+H +H CI WL ++CP CR L
Sbjct: 351 LP-CSHFYHGECIIPWLGIRNTCPVCRYEL 379
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 99 NTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDK 158
NTG+ +K +K+ + D +C+IC E+ ++V L +C H FH+ C+++
Sbjct: 290 NTGLTEKQIKSCLRKVKPCRQDTTVADRKCIICQDEYEAKDEVGEL-RCGHRFHIDCVNQ 348
Query: 159 WLSSHSSCPKCR 170
WL +SCP C+
Sbjct: 349 WLVRKNSCPVCK 360
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 104 KKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSH 163
K ++ P + + + +L S DS C +C EF + + +P C+H +H CI WL H
Sbjct: 163 KSSIDALPTIKIT-QKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPWLVQH 220
Query: 164 SSCPKCRQCL 173
+SCP CR+ L
Sbjct: 221 NSCPVCRKEL 230
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 104 KKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSH 163
K ++ P + + + +L S DS C +C EF + + +P C+H +H CI WL H
Sbjct: 163 KSSIDALPTIKIT-QKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPWLVQH 220
Query: 164 SSCPKCRQCL 173
+SCP CR+ L
Sbjct: 221 NSCPVCRKEL 230
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 104 KKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSH 163
K ++ P + + + +L S DS C +C EF + + +P C+H +H CI WL H
Sbjct: 163 KSSIDALPTIKIT-QKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPWLVQH 220
Query: 164 SSCPKCRQCL 173
+SCP CR+ L
Sbjct: 221 NSCPVCRKEL 230
>AT5G37280.1 | Symbols: | RING/U-box superfamily protein |
chr5:14761275-14761925 REVERSE LENGTH=216
Length = 216
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 122 PSLDSE--CVICLSEFTNG------EKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
PS+DS+ C IC + ++ + +PKC H FH +CI KW+ +SCP CR+
Sbjct: 151 PSMDSDESCSICFEKLSDSLSETYHNSIIQMPKCLHSFHQKCIFKWIGRQNSCPLCRRVP 210
Query: 174 IETCE 178
E E
Sbjct: 211 FEEDE 215
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 121 LPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLI 174
L S D+ C+IC E T+ +K+ C H FHV C+ WL ++CP CR ++
Sbjct: 106 LSSNDATCIICREEMTSAKKL----VCGHLFHVHCLRSWLERQNTCPTCRALVV 155
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 78 LRCSNLVVIGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTN 137
L L+ +GD + + +R G+ + + P Y N + CVIC ++ +
Sbjct: 243 LSYEELLALGD-IVGTESR----GLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYED 297
Query: 138 GEKVRILPKCNHGFHVRCIDKWLSSHSSCPKC 169
E + +LP C H +H CI+ WL + CP C
Sbjct: 298 DEDLILLP-CKHSYHSECINNWLKINKVCPVC 328
>AT4G38140.1 | Symbols: | RING/U-box superfamily protein |
chr4:17899868-17900305 REVERSE LENGTH=145
Length = 145
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKW-LSSHSSCPKCR 170
C ICL EF + V LP+C H FH+ CI+ W L H +CP CR
Sbjct: 62 CPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCR 105
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 127 ECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
+C +CL +F G + + +P C H FH C+ WL HSSCP CR L
Sbjct: 224 QCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCRYLL 269
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 127 ECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
+C +CL +F G + + +P C H FH C+ WL HSSCP CR L
Sbjct: 224 QCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCRYLL 269
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 127 ECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
+C +CL +F G + + +P C H FH C+ WL HSSCP CR L
Sbjct: 224 QCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCRYLL 269
>AT5G37250.1 | Symbols: | RING/U-box superfamily protein |
chr5:14750393-14750971 FORWARD LENGTH=192
Length = 192
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 100 TGVKKKALKTFPVVSYSAELNLPSLDSE----CVICLSEFT--NGEKVRILPKCNHGFHV 153
+ + ++ TF + + L L E C ICL +F+ + + + +LP C H FH
Sbjct: 105 SSIAVRSTDTFQRLLEEQTMELTDLGDEEETTCSICLEDFSESHDDNIILLPDCFHLFHQ 164
Query: 154 RCIDKWLSSHSSCPKCRQ 171
CI +WL SCP CR+
Sbjct: 165 NCIFEWLKRQRSCPLCRR 182
>AT5G02750.1 | Symbols: | RING/U-box superfamily protein |
chr5:620101-620952 FORWARD LENGTH=283
Length = 283
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 127 ECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
ECVIC E + G V +P C H FH +CI WLS ++CP CR
Sbjct: 213 ECVICKEEMSEGRDVCEMP-CQHFFHWKCILPWLSKKNTCPFCR 255
>AT4G00305.1 | Symbols: | RING/U-box superfamily protein |
chr4:131550-131930 FORWARD LENGTH=126
Length = 126
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 116 SAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHS-SCPKCR 170
S+ +N P C IC EF G++VR L C H +H CID+W+ +CP CR
Sbjct: 62 SSRVNPPE---SCRICQDEFDGGDEVRCLRNCVHVYHKTCIDRWIQDDKMTCPLCR 114
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 125 DSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
D +C IC E+ +G++V LP C H +HV C +WL + CP C+
Sbjct: 465 DVKCSICQEEYVDGDEVGTLP-CQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 125 DSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
D +C IC E+ +G++V LP C H +HV C +WL + CP C+
Sbjct: 465 DVKCSICQEEYVDGDEVGTLP-CQHKYHVSCAQQWLRMKNWCPICK 509
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 128 CVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
C ICL EF +G KV LP C H F C+ W ++ CP CR
Sbjct: 175 CTICLEEFNDGTKVMTLP-CGHEFDDECVLTWFETNHDCPLCR 216
>AT5G37230.1 | Symbols: | RING/U-box superfamily protein |
chr5:14735154-14735780 FORWARD LENGTH=208
Length = 208
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 125 DSECVICLSEFT--NGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQ 171
++ C IC+ +F+ + + + +LP C H FH CI KWL SCP CR+
Sbjct: 150 ETTCSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQRSCPLCRR 198
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 88 DSVTNSPTRAANTGVKKKALKTFPVVSYS-----AELNLPSLDSECVICLSEFTNGEKVR 142
++ N R+ N K A+++ P V S AE N C +C F G + R
Sbjct: 177 EASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEAN-------CAVCTEVFEAGIEGR 229
Query: 143 ILPKCNHGFHVRCIDKWLSSHSSCPKCR 170
+P C H FH CI WLS +SCP CR
Sbjct: 230 EMP-CKHIFHGDCIVPWLSIRNSCPVCR 256
>AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B |
chr2:100703-101146 FORWARD LENGTH=147
Length = 147
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 126 SECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSS-HSSCPKCRQCLI 174
S+C++CLS+ GE+VR L C H FH +C++ WL + +CP CR L+
Sbjct: 72 SDCIVCLSKLKTGEEVRKL-DCRHVFHKQCLEGWLQHLNFNCPLCRSPLL 120
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 125 DSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCEK 179
D C +CL +F E V + P C H FH CI WL + CP CR +++ ++
Sbjct: 141 DKRCSVCLEDFEPKETVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVILKPTKQ 194
>AT5G37270.1 | Symbols: | RING/U-box superfamily protein |
chr5:14757933-14758559 REVERSE LENGTH=208
Length = 208
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 125 DSECVICLSEFT--NGEKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQ 171
++ C ICL +F+ + + + +LP C H FH CI +WL SCP CR+
Sbjct: 150 ETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLCRR 198
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 85 VIGDSVTNSPTRAANTGVKKKALKTFPVVSYSAELNLPSLDSECVICLSEFTNGEKVRIL 144
+IG N K + P V + E L S+ C IC E EKV+ L
Sbjct: 249 IIGQMFDNETGIKGTPPASKSVVDGLPDVELTIE-ELSSVSIVCAICKDEVVFKEKVKRL 307
Query: 145 PKCNHGFHVRCIDKWLSSHSSCPKCRQCL 173
P C H +H CI WL ++CP CR L
Sbjct: 308 P-CKHYYHGECIIPWLGIRNTCPVCRHEL 335
>AT3G43430.1 | Symbols: | RING/U-box superfamily protein |
chr3:15354758-15355261 REVERSE LENGTH=167
Length = 167
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 116 SAELNLPSLDSECVICLSEFTNGEKVRILPKCNHGFHVRCIDKWL---------SSHSSC 166
+ E + +++ C +CL + + +++R L C H FH CID+WL +H +C
Sbjct: 71 AVERSPAAINDMCAVCLGDLEDEDEIRELRNCTHVFHRDCIDRWLDYECCGGDDDNHRTC 130
Query: 167 PKCRQCLI 174
P CR L+
Sbjct: 131 PLCRTPLL 138