Miyakogusa Predicted Gene

Lj1g3v0813940.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0813940.3 Non Chatacterized Hit- tr|D8QMS4|D8QMS4_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,43.85,3e-18,seg,NULL; Usp,UspA; Adenine nucleotide alpha
hydrolases-like,NULL; no description,Rossmann-like alph,CUFF.26374.3
         (189 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G44760.1 | Symbols:  | Adenine nucleotide alpha hydrolases-li...   181   3e-46
AT2G03720.1 | Symbols: MRH6 | Adenine nucleotide alpha hydrolase...    68   4e-12
AT1G69080.1 | Symbols:  | Adenine nucleotide alpha hydrolases-li...    64   4e-11
AT1G69080.2 | Symbols:  | Adenine nucleotide alpha hydrolases-li...    63   9e-11
AT5G17390.1 | Symbols:  | Adenine nucleotide alpha hydrolases-li...    55   2e-08

>AT1G44760.1 | Symbols:  | Adenine nucleotide alpha hydrolases-like
           superfamily protein | chr1:16896894-16898427 REVERSE
           LENGTH=213
          Length = 213

 Score =  181 bits (458), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 99/186 (53%), Positives = 116/186 (62%), Gaps = 6/186 (3%)

Query: 6   SFLSELSSKEAWKSTSNRWSAKKS--RYSSSGCEASLSQMEGFNMQYGSEDCTGXXXXXX 63
           S L +LS KE W+S S RW++  S   ++        S MEG    Y   D         
Sbjct: 7   SILRQLSRKEGWRSASKRWTSGDSSTAFNDDTSGGGYSSMEGLYGVYSGGDTAARSKRVM 66

Query: 64  XXXXXDGSSHSKHAMLWALTHVVNKGDLLTLLHIGYESSSCSNYLLNYFESLCKDCKPEV 123
                D SS SKHAM+WALTH+ NKGDL+TLLH+       +  L     SLCK CKPEV
Sbjct: 67  VVV--DESSRSKHAMMWALTHLTNKGDLVTLLHVVSPDDEATPSLAQSLGSLCKACKPEV 124

Query: 124 EVEPLVIQGPKLATVMSQVKKLEVSVLVLGQKKPSSLLSCICGTSNSSTEEFVEHCINNA 183
           +VE LVIQGPKLATV+SQVKKLEVSVLVLGQKK + L+SC+CG S S  EE V  CIN A
Sbjct: 125 DVEALVIQGPKLATVLSQVKKLEVSVLVLGQKKSAPLISCLCGPSRS--EELVNRCINGA 182

Query: 184 ECLTIG 189
           +CLTIG
Sbjct: 183 DCLTIG 188


>AT2G03720.1 | Symbols: MRH6 | Adenine nucleotide alpha
           hydrolases-like superfamily protein |
           chr2:1132364-1133225 FORWARD LENGTH=165
          Length = 165

 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 16/137 (11%)

Query: 69  DGSSHSKHAMLWALTHVVNKGDLLTLLHI------------GYESSSCSNYLLNYFESLC 116
           D +S +K+A+ WALTH V   D +TLLH+              E +S ++ L++  ++ C
Sbjct: 5   DTTSQTKNALQWALTHCVQDEDNITLLHVTRTPVGQAIDETQRERNSRAHELVHPLKNFC 64

Query: 117 KDCKPEVEVEPLVIQGP--KLATVMSQVKKLEVSVLVLGQKKPSSLLSCICG--TSNSST 172
           +  KP V+ E +V++    K  T++ + KK    VLVLGQ+K +S    I    T     
Sbjct: 65  QLKKPNVKTEIVVVETAEEKGKTIVEESKKQGAGVLVLGQRKRTSKWRVIWKWRTKGGMG 124

Query: 173 EEFVEHCINNAECLTIG 189
              VE+CI+N++C+ I 
Sbjct: 125 GGVVEYCIHNSDCMAIA 141


>AT1G69080.1 | Symbols:  | Adenine nucleotide alpha hydrolases-like
           superfamily protein | chr1:25972132-25973243 REVERSE
           LENGTH=223
          Length = 223

 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 27/148 (18%)

Query: 69  DGSSHSKHAMLWALTHVVNKGDLLTLLHIGYESSSCSNYLLNYFE--------------- 113
           D  S +K+A+LW L+H     D + LLH     +S S  L N  E               
Sbjct: 51  DSCSEAKNALLWTLSHCAQPQDSILLLHFLKAKTSQSGDLANKEEGEDESCDKPTTSRAD 110

Query: 114 -------SLCKDCKPEVEVEPLVIQGP-KLATVMSQVKKLEVSVLVLGQKKPSS---LLS 162
                  ++C+  +PEV+ E + ++G  K  T++ + ++ E S+LVLGQKK  +   LL 
Sbjct: 111 KKVSALKTMCELKRPEVKTEVVFVKGDEKGPTIVKEAREREASLLVLGQKKQHATWRLLM 170

Query: 163 CICGTSNSSTE-EFVEHCINNAECLTIG 189
                +   T+ +FVE+CINN+ C+ I 
Sbjct: 171 VWASQARPVTKHDFVEYCINNSPCMAIA 198


>AT1G69080.2 | Symbols:  | Adenine nucleotide alpha hydrolases-like
           superfamily protein | chr1:25972132-25973243 REVERSE
           LENGTH=209
          Length = 209

 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 13/134 (9%)

Query: 69  DGSSHSKHAMLWALTHVVNKGDLLTLLHIGYESSSCSNYLLNYFESLCKDC-KP------ 121
           D  S +K+A+LW L+H     D + LLH     +S S  L N  E   + C KP      
Sbjct: 51  DSCSEAKNALLWTLSHCAQPQDSILLLHFLKAKTSQSGDLANKEEGEDESCDKPTTSRAD 110

Query: 122 -EVEVEPLVIQGP-KLATVMSQVKKLEVSVLVLGQKKPSS---LLSCICGTSNSSTE-EF 175
            +V+ E + ++G  K  T++ + ++ E S+LVLGQKK  +   LL      +   T+ +F
Sbjct: 111 KKVKTEVVFVKGDEKGPTIVKEAREREASLLVLGQKKQHATWRLLMVWASQARPVTKHDF 170

Query: 176 VEHCINNAECLTIG 189
           VE+CINN+ C+ I 
Sbjct: 171 VEYCINNSPCMAIA 184


>AT5G17390.1 | Symbols:  | Adenine nucleotide alpha hydrolases-like
           superfamily protein | chr5:5727640-5728688 FORWARD
           LENGTH=285
          Length = 285

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 16/136 (11%)

Query: 69  DGSSHSKHAMLWALTHVVNKGDLLTLLHIG----------YESSSCSNYLLNYFESLCKD 118
           D +  S  A+ WA+TH +   D L LL+             +    ++ L++  + LC+ 
Sbjct: 124 DKALASTGALEWAITHTLQPQDTLFLLYFAKPFRKSKRKNRKREVKTDELVHTLKKLCQT 183

Query: 119 CKPEVEVEPLVIQGP---KLATVMSQVKKLEVSVLVLGQ-KKPS--SLLSCICGTSNSST 172
            +P +EVE   ++G    K   ++ + KK +VS+LV+GQ KKP    LL           
Sbjct: 184 KRPGIEVEIRRLEGKDKDKGQKIVEESKKQQVSLLVVGQEKKPPVWRLLKRWAWKRRRGH 243

Query: 173 EEFVEHCINNAECLTI 188
           E  +++C+ NA C+TI
Sbjct: 244 EGVLKYCLENASCMTI 259