Miyakogusa Predicted Gene
- Lj1g3v0096380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0096380.1 tr|G7K3N9|G7K3N9_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,79.2,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no
description,Tetratricopeptide-like helical; PPR,,CUFF.25197.1
(692 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 748 0.0
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 502 e-142
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 428 e-120
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 418 e-117
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 416 e-116
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 409 e-114
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 402 e-112
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 402 e-112
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 402 e-112
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 399 e-111
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 394 e-109
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 393 e-109
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 392 e-109
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 388 e-108
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 388 e-108
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 386 e-107
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-107
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-106
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 376 e-104
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 368 e-102
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 364 e-101
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 362 e-100
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 1e-99
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 3e-99
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 357 1e-98
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 3e-98
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 4e-98
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 355 8e-98
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 354 1e-97
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 354 1e-97
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 354 1e-97
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 2e-97
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 2e-97
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 352 5e-97
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 6e-97
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 348 7e-96
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 348 9e-96
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 1e-95
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 2e-95
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 1e-94
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 2e-94
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 2e-94
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 8e-94
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 2e-93
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 337 2e-92
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 3e-92
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 335 7e-92
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 3e-91
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 333 3e-91
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 332 4e-91
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 332 7e-91
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 3e-90
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 329 4e-90
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 4e-90
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 4e-90
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 4e-90
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 7e-90
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 1e-89
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 1e-89
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 327 1e-89
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 3e-89
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 7e-89
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 3e-88
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 322 5e-88
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 9e-88
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 320 2e-87
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 320 2e-87
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 320 3e-87
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 319 5e-87
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 318 7e-87
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 9e-87
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 315 5e-86
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 2e-85
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 4e-85
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 7e-85
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 311 1e-84
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 309 4e-84
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 6e-84
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 6e-84
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 9e-84
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 1e-83
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 4e-83
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 3e-82
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 4e-82
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 302 4e-82
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 8e-82
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 1e-81
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 3e-81
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 4e-81
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 4e-81
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 8e-81
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 297 2e-80
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 7e-80
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 1e-79
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 1e-79
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 8e-79
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 3e-78
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 5e-78
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 4e-77
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 286 5e-77
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 284 1e-76
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 282 5e-76
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 9e-76
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 5e-75
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 7e-75
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 7e-75
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 8e-75
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 1e-74
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 2e-73
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 3e-72
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 7e-70
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 259 3e-69
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 3e-69
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 8e-68
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 2e-67
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 6e-66
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 247 2e-65
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 6e-65
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 2e-63
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 4e-63
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 230 2e-60
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 8e-59
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 1e-58
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 9e-58
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 6e-57
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 215 8e-56
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 2e-49
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 2e-47
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 2e-42
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 8e-40
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 8e-30
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 120 2e-27
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 3e-26
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 114 2e-25
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 114 3e-25
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 5e-25
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 5e-25
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-24
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 5e-24
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 5e-24
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 6e-24
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 6e-24
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 7e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 7e-24
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 8e-24
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 5e-23
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 6e-23
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 104 2e-22
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 3e-22
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 102 1e-21
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-21
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 100 5e-21
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 7e-21
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 99 7e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 97 3e-20
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 96 1e-19
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 5e-19
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 9e-19
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 92 9e-19
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-18
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 7e-18
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 3e-17
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 6e-17
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 86 8e-17
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 85 1e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 85 2e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 2e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 4e-16
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 80 4e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 79 9e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 77 3e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 76 1e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 75 2e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 73 6e-13
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 73 6e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 70 7e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 62 1e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 59 1e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 6e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 56 7e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 2e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 2e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/667 (53%), Positives = 473/667 (70%), Gaps = 8/667 (1%)
Query: 32 QLKQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNP-DTHFCNQLLR 90
+KQ+HA ILR+ ++ VFS IP+P ++ N LR
Sbjct: 27 HIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALN--VFSSIPSPPESIVFNPFLR 84
Query: 91 LLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHS 150
LSRS P+ T+ YQ++R VG KAVSK SAL+ G+E+HG+A K+
Sbjct: 85 DLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLC 144
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMK 210
DPF++TG + MY++C RI AR VFD+MSHRD VTWN MI+ YC+ G D+ KL+EEMK
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 211 TSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMD 270
S+ PD +ILC ++SACG +GN+ Y +AI+EF+++N + + HL +ALV MY G MD
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 271 LARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQ 330
+ARE + K+S ++L VSTAM+SGY+K G + DA+ IFDQ +KDLVCW+ MIS Y ESD
Sbjct: 265 MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDY 324
Query: 331 PQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNA 390
PQEAL++F EM I PD ++M S ISACAN+G L +A+W+H+ NG LS+NNA
Sbjct: 325 PQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNA 384
Query: 391 LIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPN 450
LI+MYAKCG L ++VFE MPR+NV+SWSSMINA +MHG A+ A++LF RMK+E++EPN
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 451 GVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELI 510
V F+GVLY CSH+GLVEEG+K+F+SM +E+ I P+ EHYGCMVDL+ RANLLR+A+E+I
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 511 ESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWN 570
ESMP A NV+IWGSLMSAC++HGE+ELG+FAAK+ILELEPDHDGALV++SNIYA+E+RW
Sbjct: 505 ESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWE 564
Query: 571 DVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVS 630
DV IR+ M K + KEK SR++ N + H F++ D+ HKQS EIY KL+EVVS+LKL
Sbjct: 565 DVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAG 624
Query: 631 YTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRR---KESC--IRIVKNLRICED 685
Y P WHSEKLALC+GL+++ + K+SC IRIVKNLR+CED
Sbjct: 625 YVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCED 684
Query: 686 CHSFMKL 692
CH F KL
Sbjct: 685 CHLFFKL 691
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 502 bits (1292), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/664 (38%), Positives = 391/664 (58%), Gaps = 4/664 (0%)
Query: 32 QLKQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLRL 91
QLKQ H ++R+ + VF +IP P++ N L+R
Sbjct: 45 QLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRA 104
Query: 92 LSRSPTPQNTLFLY-QKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHS 150
+ P P +++ + + KA ++ S+L LG +HG+A K S
Sbjct: 105 YASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGS 164
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMK 210
D F+ LI Y +C + A VF + +D V+WN MI+G+ Q G+ D+ L+L+++M+
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 211 TSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMD 270
+ D K V + VLSAC NL +G+ + +I +N + ++ L +A+++MY CG+++
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 271 LARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQ 330
A+ L+D + K V T ML GYA + AR + + + +KD+V W+A+IS Y ++ +
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 331 PQEALKLFNEMQL-RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNN 389
P EAL +F+E+QL +N+ +QIT++S +SACA VGAL RWIH+Y K+G + V +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 390 ALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEP 449
ALI MY+KCG+L +++EVF ++ +++V WS+MI AMHG N A+++F++M+E +++P
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 450 NGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMEL 509
NGV F V ACSH GLV+E + LF M + +GI P +HY C+VD+ R+ L KA++
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 510 IESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRW 569
IE+MP P+ +WG+L+ AC++H + L E A ++LELEP +DGA V+LSNIYAK +W
Sbjct: 525 IEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKW 584
Query: 570 NDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLV 629
+V +R+ M G+ KE S +EI+ +H F+ D H S ++Y KL EV+ +LK
Sbjct: 585 ENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSN 644
Query: 630 SYTPSTSGX-XXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHS 688
Y P S HSEKLA+CYGLIS + IR++KNLR+C DCHS
Sbjct: 645 GYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPK-VIRVIKNLRVCGDCHS 703
Query: 689 FMKL 692
KL
Sbjct: 704 VAKL 707
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/653 (35%), Positives = 363/653 (55%), Gaps = 65/653 (9%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF I P+ N + R + S P + L LY + +G K+ +K+ A
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVT------- 185
G +IHG KLG D ++ T LI+MY R+ DA VFDK HRD V+
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 186 ------------------------WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVIL 221
WN MI GY ++GNY + L+L+++M ++ +PD +
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 222 CTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSS 281
TV+SAC SG++ G+ +H +I D+G + + +AL+++Y CG ++ A L
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL------ 323
Query: 282 KHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEM 341
F+++ KD++ W+ +I GY + +EAL LF EM
Sbjct: 324 -------------------------FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
Query: 342 QLRNIVPDQITMLSAISACANVGALAQARWIHTYADK--NGFGRSLSVNNALIDMYAKCG 399
P+ +TMLS + ACA++GA+ RWIH Y DK G + S+ +LIDMYAKCG
Sbjct: 359 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 418
Query: 400 NLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLY 459
++ A +VF ++ K++ SW++MI FAMHG A+++ +LF RM++ I+P+ + F+G+L
Sbjct: 419 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Query: 460 ACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNV 519
ACSH+G+++ G+ +F +M ++ + P+ EHYGCM+DL + L ++A E+I M P+
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 538
Query: 520 IIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSM 579
+IW SL+ AC++HG VELGE A+ ++++EP++ G+ V+LSNIYA RWN+V R +
Sbjct: 539 VIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 598
Query: 580 ANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXX 639
+KG+ K S +EI++ VH F++ D++H ++REIY LEE+ L+ + P TS
Sbjct: 599 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVL 658
Query: 640 XXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
HSEKLA+ +GLIS + + IVKNLR+C +CH KL
Sbjct: 659 QEMEEEWKEGALRHHSEKLAIAFGLISTKPGTK-LTIVKNLRVCRNCHEATKL 710
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/565 (36%), Positives = 329/565 (58%), Gaps = 1/565 (0%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSK-AS 131
+F +IP PD N +++ S+ + LY + + G + +
Sbjct: 90 LFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGG 149
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
AL G ++H K G S+ ++Q L+ MYS C + AR VFD+ D +WN+MI
Sbjct: 150 ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS 209
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
GY + Y++ ++L EM+ + P V L VLSAC + K +HE++ +
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
S L++ALVN Y CG MD+A ++ + ++ ++ T+++ GY + G +K AR FDQ+
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
+D + W+ MI GY + E+L++F EMQ ++PD+ TM+S ++ACA++G+L W
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
I TY DKN + V NALIDMY KCG +A++VF +M +++ +W++M+ A +G
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
A+ +F +M++ I+P+ + ++GVL AC+H+G+V++ +K F+ M ++H I P HYG
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPD 551
CMVD+ RA L+++A E++ MP PN I+WG+L+ A ++H + + E AAK+ILELEPD
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569
Query: 552 HDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQ 611
+ +L NIYA +RW D+ +R+ + + I K S +E+N H F+ D+ H Q
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQ 629
Query: 612 SREIYKKLEEVVSELKLVSYTPSTS 636
S EIY KLEE+ E +Y P TS
Sbjct: 630 SEEIYMKLEELAQESTFAAYLPDTS 654
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/622 (35%), Positives = 349/622 (56%), Gaps = 35/622 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF +P P N ++R SR+ Q+ L +Y ++ KA S S
Sbjct: 75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH 134
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFD--KMSHRDAVTWNIMI 190
L +G +H +LGF +D F+Q GLIA+Y+ CRR+ AR VF+ + R V+W ++
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
Y Q+G + L+++ +M+ D KPD V L +VL+A +L G++IH ++ GL
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+ L +L MY CG V A+ +FD++
Sbjct: 255 IEPDLLISLNTMYAKCG-------------------------------QVATAKILFDKM 283
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR 370
+L+ W+AMISGYA++ +EA+ +F+EM +++ PD I++ SAISACA VG+L QAR
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
++ Y ++ + + +++ALIDM+AKCG++ A+ VF+ ++V+ WS+MI + +HG
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY 490
A A++L+ M+ + PN V F+G+L AC+H+G+V EG F+ M +H I P+ +HY
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHY 462
Query: 491 GCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEP 550
C++DL RA L +A E+I+ MP P V +WG+L+SAC+ H VELGE+AA+Q+ ++P
Sbjct: 463 ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDP 522
Query: 551 DHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHK 610
+ G V LSN+YA R W+ V +R M KG++K+ S VE+ + F + D+ H
Sbjct: 523 SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHP 582
Query: 611 QSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRK 670
+ EI +++E + S LK + + HSE++A+ YGLIS +
Sbjct: 583 RYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQG 642
Query: 671 ESCIRIVKNLRICEDCHSFMKL 692
+ +RI KNLR C +CH+ KL
Sbjct: 643 -TPLRITKNLRACVNCHAATKL 663
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 138/248 (55%), Gaps = 4/248 (1%)
Query: 288 TAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIV 347
T ++ + G + AR +FD + + W+A+I GY+ ++ Q+AL +++ MQL +
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 348 PDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEV 407
PD T + AC+ + L R++H + GF + V N LI +YAKC L A+ V
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 408 FEN--MPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAG 465
FE +P + ++SW+++++A+A +G A+ +F +M++ D++P+ V + VL A +
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 236
Query: 466 LVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSL 525
+++G+ + +S++ + G+ + + +Y + + A L + M +PN+I+W ++
Sbjct: 237 DLKQGRSIHASVV-KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAM 294
Query: 526 MSACQVHG 533
+S +G
Sbjct: 295 ISGYAKNG 302
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/620 (34%), Positives = 344/620 (55%), Gaps = 32/620 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+FS P+ N L+ + TL L+ +R+ G KA ++AS+
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
LG+++H L K GF+ D T L+++YS R+ DA +FD++ R VTW + G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y SG + + + L+++M KPD + VLSAC H G+L G+ I +++ + + +
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ +++ LVN+Y C G ++ AR +FD +VE
Sbjct: 247 SFVRTTLVNLYAKC-------------------------------GKMEKARSVFDSMVE 275
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
KD+V WS MI GYA + P+E ++LF +M N+ PDQ +++ +S+CA++GAL W
Sbjct: 276 KDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWG 335
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
+ D++ F +L + NALIDMYAKCG + R EVF+ M K+++ ++ I+ A +G+
Sbjct: 336 ISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHV 395
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
+ +F + ++ I P+G F+G+L C HAGL+++G + F+++ + + EHYGC
Sbjct: 396 KLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGC 455
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
MVDL+ RA +L A LI MP PN I+WG+L+S C++ + +L E K+++ LEP +
Sbjct: 456 MVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWN 515
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQS 612
G V LSNIY+ RW++ +R M KG+ K S +E+ +VH F+ D+ H S
Sbjct: 516 AGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLS 575
Query: 613 REIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKES 672
+IY KLE++ +E++L+ + P+T +HSEKLA+ GLIS +
Sbjct: 576 DKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQ- 634
Query: 673 CIRIVKNLRICEDCHSFMKL 692
IR+VKNLR+C DCH MKL
Sbjct: 635 VIRVVKNLRVCGDCHEVMKL 654
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 109/229 (47%), Gaps = 2/229 (0%)
Query: 300 VKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISA 359
K + +F ++ ++++I+G+ + E L LF ++ + T + A
Sbjct: 61 TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 360 CANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISW 419
C + +H+ K GF ++ +L+ +Y+ G L A ++F+ +P ++V++W
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW 180
Query: 420 SSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMIN 479
+++ + + G A++LF +M E ++P+ + VL AC H G ++ G+ + M
Sbjct: 181 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-E 239
Query: 480 EHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
E + +V+LY + + KA + +SM +++ W +++
Sbjct: 240 EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG 287
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/525 (39%), Positives = 304/525 (57%), Gaps = 35/525 (6%)
Query: 171 ARLVFDKMSHR-DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD-TKPDGVILCTVLSAC 228
A VF K+ + WN +I GY + GN LY EM+ S +PD ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 229 GHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVST 288
++ G+ IH ++ +G ++Q++L+++Y NCG
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGD-------------------- 171
Query: 289 AMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVP 348
V A +FD++ EKDLV W+++I+G+AE+ +P+EAL L+ EM + I P
Sbjct: 172 -----------VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP 220
Query: 349 DQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVF 408
D T++S +SACA +GAL + +H Y K G R+L +N L+D+YA+CG + AK +F
Sbjct: 221 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280
Query: 409 ENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE-EDIEPNGVIFIGVLYACSHAGLV 467
+ M KN +SW+S+I A++G+ A+ LF M+ E + P + F+G+LYACSH G+V
Sbjct: 281 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 340
Query: 468 EEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMS 527
+EG + F M E+ I PR EH+GCMVDL RA ++KA E I+SMP PNV+IW +L+
Sbjct: 341 KEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 400
Query: 528 ACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKE 587
AC VHG+ +L EFA QIL+LEP+H G V+LSN+YA E+RW+DV IR+ M G+ K
Sbjct: 401 ACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKV 460
Query: 588 KASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXX 647
S VE+ N VH F+M D+ H QS IY KL+E+ L+ Y P S
Sbjct: 461 PGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEK 520
Query: 648 XXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
+HSEK+A+ + LIS + S I +VKNLR+C DCH +KL
Sbjct: 521 ENAVVYHSEKIAIAFMLISTPER-SPITVVKNLRVCADCHLAIKL 564
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 191/383 (49%), Gaps = 38/383 (9%)
Query: 73 VFSQIPNPDTHFC-NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXX-XXXXXXKAVSKA 130
VFS+I P F N L+R + + LY+++R G KAV+
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM 134
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMI 190
+ + LG IH + + GF S ++Q L+ +Y+ C + A VFDKM +D V WN +I
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 194
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
+G+ ++G ++ L LY EM + KPDG + ++LSAC G L+ GK +H +++ GL
Sbjct: 195 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+ H + L+++Y CG ++ A+ L+D++ K+ V T+++ G A +G K
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGK--------- 305
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQ-LRNIVPDQITMLSAISACANVGALAQA 369
EA++LF M+ ++P +IT + + AC++ G + +
Sbjct: 306 ----------------------EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 343
Query: 370 -RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFA 427
+ ++ + ++D+ A+ G + +A E ++MP + NV+ W +++ A
Sbjct: 344 FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 403
Query: 428 MHGYANSAMNLFHRMKEEDIEPN 450
+HG +S + F R++ +EPN
Sbjct: 404 VHG--DSDLAEFARIQILQLEPN 424
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/568 (36%), Positives = 331/568 (58%), Gaps = 2/568 (0%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVT 185
A +K L G +++ G + + + L+ MY C I A+ +FD+ +
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
N M Y + G + L ++ M S +PD + + + +S+C N+ +GK+ H +++
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
NG ++ +AL++MY+ C D A ++D++S+K +V ++++GY ++G V A
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIV-PDQITMLSAISACANVG 364
F+ + EK++V W+ +ISG + +EA+++F MQ + V D +TM+S SAC ++G
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
AL A+WI+ Y +KNG + + L+DM+++CG+ A +F ++ ++V +W++ I
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
A AM G A A+ LF M E+ ++P+GV F+G L ACSH GLV++G+++F SM+ HG++
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 485 PRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQ 544
P HYGCMVDL RA LL +A++LIE MP PN +IW SL++AC+V G VE+ +AA++
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 545 ILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMM 604
I L P+ G+ V+LSN+YA RWND+ +R SM KG+ K +S ++I + H F
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 605 ADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGL 664
D H + I L+EV + + P S HSEKLA+ YGL
Sbjct: 725 GDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGL 784
Query: 665 ISKRRKESCIRIVKNLRICEDCHSFMKL 692
IS K + IRIVKNLR+C DCHSF K
Sbjct: 785 ISS-NKGTTIRIVKNLRVCSDCHSFAKF 811
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 201/399 (50%), Gaps = 36/399 (9%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N L+R + S + L+ ++ G A +K+ A G++IHGL K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL 205
+G+ D F+Q L+ Y+ C + AR VFD+MS R+ V+W MI GY + + L
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 206 YEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYV 264
+ M + + P+ V + V+SAC +L G+ ++ FI ++G+ ++ + SALV+MY+
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 282
Query: 265 NCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISG 324
C A+D+A+ L+D+ + +L + AM S Y + G+ +
Sbjct: 283 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR----------------------- 319
Query: 325 YAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS 384
EAL +FN M + PD+I+MLSAIS+C+ + + + H Y +NGF
Sbjct: 320 --------EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 385 LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE 444
++ NALIDMY KC A +F+ M K V++W+S++ + +G ++A F M E
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 445 EDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
++I I G++ L EE ++F SM ++ G+
Sbjct: 432 KNIVSWNTIISGLV----QGSLFEEAIEVFCSMQSQEGV 466
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 108/195 (55%), Gaps = 2/195 (1%)
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
++++I GYA S EA+ LF M I PD+ T +SACA A IH
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
K G+ + L V N+L+ YA+CG L A++VF+ M +NV+SW+SMI +A +A A++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 438 LFHRM-KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDL 496
LF RM ++E++ PN V + V+ AC+ +E G+K++ + I GI +VD+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-AFIRNSGIEVNDLMVSALVDM 280
Query: 497 YCRANLLRKAMELIE 511
Y + N + A L +
Sbjct: 281 YMKCNAIDVAKRLFD 295
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 160/392 (40%), Gaps = 65/392 (16%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F + + CN + R + L ++ + G + S+
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+ G HG + GF S I LI MY C R A +FD+MS++ VTWN ++ G
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 193 YCQSGNYDQVLKLYEEMKTSD--------------------------------TKPDGVI 220
Y ++G D + +E M + DGV
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472
Query: 221 LCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLS 280
+ ++ SACGH G L K I+ +I NG+ L L + LV+M+ CG + A
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS------ 526
Query: 281 SKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNE 340
IF+ + +D+ W+A I A + + A++LF++
Sbjct: 527 -------------------------IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDD 561
Query: 341 MQLRNIVPDQITMLSAISACANVGALAQARWI-HTYADKNGFGRSLSVNNALIDMYAKCG 399
M + + PD + + A++AC++ G + Q + I ++ +G ++D+ + G
Sbjct: 562 MIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAG 621
Query: 400 NLIRAKEVFENMPRK-NVISWSSMINAFAMHG 430
L A ++ E+MP + N + W+S++ A + G
Sbjct: 622 LLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/539 (38%), Positives = 320/539 (59%), Gaps = 18/539 (3%)
Query: 171 ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL---YEEMKTSDTKPDGVILCTVLSA 227
A +F++M R+ +WN +I G+ +S ++ + YE M +P+ +VL A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 228 CGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAREL-YDKLSSKHLVV 286
C +G + GK IH + G + S LV MYV CG M AR L Y + K +VV
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 287 ST-------------AMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQE 333
T M+ GY + G K AR +FD++ ++ +V W+ MISGY+ + ++
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 334 ALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALID 393
A+++F EM+ +I P+ +T++S + A + +G+L W+H YA+ +G + +ALID
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 394 MYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVI 453
MY+KCG + +A VFE +PR+NVI+WS+MIN FA+HG A A++ F +M++ + P+ V
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 454 FIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
+I +L ACSH GLVEEG++ FS M++ G+ PR EHYGCMVDL R+ LL +A E I +M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 514 PFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVG 573
P P+ +IW +L+ AC++ G VE+G+ A ++++ P GA V LSN+YA + W++V
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 574 LIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTP 633
+R M K I K+ S ++I+ +H F++ D H +++EI L E+ +L+L Y P
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRP 557
Query: 634 STSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
T+ +HSEK+A +GLIS + IRIVKNLRICEDCHS +KL
Sbjct: 558 ITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKP-IRIVKNLRICEDCHSSIKL 615
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 179/409 (43%), Gaps = 83/409 (20%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQN----TLFLYQKLRRVGXXXXXXXXXXXXKAVS 128
+F+Q+P + N ++R S S + TLF Y+ + KA +
Sbjct: 81 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLF-YEMMSDEFVEPNRFTFPSVLKACA 139
Query: 129 KASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSAC----------------------- 165
K + G +IHGLA K GF D F+ + L+ MY C
Sbjct: 140 KTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMT 199
Query: 166 -RRIMD---------------------ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVL 203
RR D AR++FDKM R V+WN MI GY +G + +
Sbjct: 200 DRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAV 259
Query: 204 KLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMY 263
+++ EMK D +P+ V L +VL A G+L G+ +H + D+G+ + L SAL++MY
Sbjct: 260 EVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMY 319
Query: 264 VNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMIS 323
CG ++ A ++++L ++++ +AM++G+A HG
Sbjct: 320 SKCGIIEKAIHVFERLPRENVITWSAMINGFAIHG------------------------- 354
Query: 324 GYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA-RWIHTYADKNGFG 382
Q +A+ F +M+ + P + ++ ++AC++ G + + R+ +G
Sbjct: 355 ------QAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLE 408
Query: 383 RSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMHG 430
+ ++D+ + G L A+E NMP K + + W +++ A M G
Sbjct: 409 PRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 5/229 (2%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVT 185
A+S+ +L LG +H A G D + + LI MYS C I A VF+++ + +T
Sbjct: 283 AISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVIT 342
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKA-IHEFI 244
W+ MI+G+ G + + +M+ + +P V +L+AC H G + G+ + +
Sbjct: 343 WSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMV 402
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK-HLVVSTAMLSGYAKHG---MV 300
+GL +V++ G +D A E + K V+ A+L G M
Sbjct: 403 SVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMG 462
Query: 301 KDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPD 349
K I +V D + A+ + YA E ++ M+ ++I D
Sbjct: 463 KRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKD 511
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/568 (36%), Positives = 331/568 (58%), Gaps = 2/568 (0%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVT 185
A +K L G +++ G + + + L+ MY C I A+ +FD+ +
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
N M Y + G + L ++ M S +PD + + + +S+C N+ +GK+ H +++
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
NG ++ +AL++MY+ C D A ++D++S+K +V ++++GY ++G V A
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIV-PDQITMLSAISACANVG 364
F+ + EK++V W+ +ISG + +EA+++F MQ + V D +TM+S SAC ++G
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
AL A+WI+ Y +KNG + + L+DM+++CG+ A +F ++ ++V +W++ I
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
A AM G A A+ LF M E+ ++P+GV F+G L ACSH GLV++G+++F SM+ HG++
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 485 PRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQ 544
P HYGCMVDL RA LL +A++LIE MP PN +IW SL++AC+V G VE+ +AA++
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 545 ILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMM 604
I L P+ G+ V+LSN+YA RWND+ +R SM KG+ K +S ++I + H F
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 605 ADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGL 664
D H + I L+EV + + P S HSEKLA+ YGL
Sbjct: 725 GDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGL 784
Query: 665 ISKRRKESCIRIVKNLRICEDCHSFMKL 692
IS K + IRIVKNLR+C DCHSF K
Sbjct: 785 ISS-NKGTTIRIVKNLRVCSDCHSFAKF 811
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 201/399 (50%), Gaps = 36/399 (9%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N L+R + S + L+ ++ G A +K+ A G++IHGL K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL 205
+G+ D F+Q L+ Y+ C + AR VFD+MS R+ V+W MI GY + + L
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 206 YEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYV 264
+ M + + P+ V + V+SAC +L G+ ++ FI ++G+ ++ + SALV+MY+
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 282
Query: 265 NCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISG 324
C A+D+A+ L+D+ + +L + AM S Y + G+ +
Sbjct: 283 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR----------------------- 319
Query: 325 YAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS 384
EAL +FN M + PD+I+MLSAIS+C+ + + + H Y +NGF
Sbjct: 320 --------EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 385 LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE 444
++ NALIDMY KC A +F+ M K V++W+S++ + +G ++A F M E
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 445 EDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
++I I G++ L EE ++F SM ++ G+
Sbjct: 432 KNIVSWNTIISGLV----QGSLFEEAIEVFCSMQSQEGV 466
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 108/195 (55%), Gaps = 2/195 (1%)
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
++++I GYA S EA+ LF M I PD+ T +SACA A IH
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
K G+ + L V N+L+ YA+CG L A++VF+ M +NV+SW+SMI +A +A A++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 438 LFHRM-KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDL 496
LF RM ++E++ PN V + V+ AC+ +E G+K++ + I GI +VD+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-AFIRNSGIEVNDLMVSALVDM 280
Query: 497 YCRANLLRKAMELIE 511
Y + N + A L +
Sbjct: 281 YMKCNAIDVAKRLFD 295
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 160/392 (40%), Gaps = 65/392 (16%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F + + CN + R + L ++ + G + S+
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+ G HG + GF S I LI MY C R A +FD+MS++ VTWN ++ G
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 193 YCQSGNYDQVLKLYEEMKTSD--------------------------------TKPDGVI 220
Y ++G D + +E M + DGV
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472
Query: 221 LCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLS 280
+ ++ SACGH G L K I+ +I NG+ L L + LV+M+ CG + A
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS------ 526
Query: 281 SKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNE 340
IF+ + +D+ W+A I A + + A++LF++
Sbjct: 527 -------------------------IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDD 561
Query: 341 MQLRNIVPDQITMLSAISACANVGALAQARWI-HTYADKNGFGRSLSVNNALIDMYAKCG 399
M + + PD + + A++AC++ G + Q + I ++ +G ++D+ + G
Sbjct: 562 MIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAG 621
Query: 400 NLIRAKEVFENMPRK-NVISWSSMINAFAMHG 430
L A ++ E+MP + N + W+S++ A + G
Sbjct: 622 LLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/602 (36%), Positives = 339/602 (56%), Gaps = 36/602 (5%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKM------- 178
+V+ + G ++H KLG + + L+ MY+ C M A+ VFD+M
Sbjct: 155 SVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISS 214
Query: 179 ------------------------SHRDAVTWNIMIDGYCQSGNYDQVLKLYEEM-KTSD 213
+ RD VTWN MI G+ Q G + L ++ +M + S
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL 274
Query: 214 TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAR 273
PD L +VLSAC + L GK IH I+ G +S + +AL++MY CG ++ AR
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334
Query: 274 ELYDKLSSKHLVVS--TAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQP 331
L ++ +K L + TA+L GY K G + A+ IF + ++D+V W+AMI GY +
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSY 394
Query: 332 QEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNAL 391
EA+ LF M P+ T+ + +S +++ +L+ + IH A K+G S+SV+NAL
Sbjct: 395 GEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 454
Query: 392 IDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPN 450
I MYAK GN+ A F+ + ++ +SW+SMI A A HG+A A+ LF M E + P+
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514
Query: 451 GVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELI 510
+ ++GV AC+HAGLV +G++ F M + I P HY CMVDL+ RA LL++A E I
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 511 ESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWN 570
E MP P+V+ WGSL+SAC+VH ++LG+ AA+++L LEP++ GA L+N+Y+ +W
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 571 DVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVS 630
+ IR+SM + + KE+ S +E+ ++VHVF + D H + EIY ++++ E+K +
Sbjct: 635 EAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMG 694
Query: 631 YTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFM 690
Y P T+ HSEKLA+ +GLIS K + +RI+KNLR+C DCH+ +
Sbjct: 695 YVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDK-TTLRIMKNLRVCNDCHTAI 753
Query: 691 KL 692
K
Sbjct: 754 KF 755
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 200/415 (48%), Gaps = 39/415 (9%)
Query: 175 FDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNL 234
FD++ RD+V+W MI GY G Y + +++ +M +P L VL++ + +
Sbjct: 103 FDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCM 162
Query: 235 SYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGY 294
GK +H FI+ GL + + ++L+NMY CG +A+ ++D++ + + AM++ +
Sbjct: 163 ETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALH 222
Query: 295 AKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN--IVPDQIT 352
+ G + A F+Q+ E+D+V W++MISG+ + AL +F++M LR+ + PD+ T
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM-LRDSLLSPDRFT 281
Query: 353 MLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC-------------- 398
+ S +SACAN+ L + IH++ GF S V NALI MY++C
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 399 -------------------GNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLF 439
G++ +AK +F ++ ++V++W++MI + HG A+NLF
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 440 HRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCR 499
M PN +L S + G+++ S + I ++ +Y +
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS-NALITMYAK 460
Query: 500 ANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFAAKQILELEPDH 552
A + A + + + + W S++ A HG E L F + L PDH
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 162/336 (48%), Gaps = 41/336 (12%)
Query: 216 PDGVILCTVLSACGH----SGNLSYGK----AIHEFIMDNGLALSAHLQSALVNMYVNCG 267
P + L T+L C + S N S G+ +H ++ +GL S +L + L+N+Y G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 268 AMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAE 327
AR+L+D++ + +LS Y+K G + FDQ+ ++D V W+ MI GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 328 SDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSV 387
Q +A+++ +M I P Q T+ + +++ A + + +H++ K G ++SV
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 388 NNALIDMYAKCGNLIRAKEV-------------------------------FENMPRKNV 416
+N+L++MYAKCG+ + AK V FE M +++
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 417 ISWSSMINAFAMHGYANSAMNLFHRM-KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFS 475
++W+SMI+ F GY A+++F +M ++ + P+ VL AC++ + G+++ S
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 476 SMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIE 511
++ G ++ +Y R + A LIE
Sbjct: 304 HIVTT-GFDISGIVLNALISMYSRCGGVETARRLIE 338
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/550 (35%), Positives = 322/550 (58%), Gaps = 3/550 (0%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVG---XXXXXXXXXXXXKAVSK 129
+ I NP+ N +R S S P+ + LY+++ R G K +
Sbjct: 109 ILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCAD 168
Query: 130 ASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIM 189
LG I G KL + I M+++C + +AR VFD+ RD V+WN +
Sbjct: 169 LRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCL 228
Query: 190 IDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGL 249
I+GY + G ++ + +Y+ M++ KPD V + ++S+C G+L+ GK +E++ +NGL
Sbjct: 229 INGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGL 288
Query: 250 ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQ 309
++ L +AL++M+ CG + AR ++D L + +V T M+SGYA+ G++ +R +FD
Sbjct: 289 RMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDD 348
Query: 310 IVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
+ EKD+V W+AMI G ++ + Q+AL LF EMQ N PD+ITM+ +SAC+ +GAL
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
WIH Y +K ++++ +L+DMYAKCGN+ A VF + +N ++++++I A+H
Sbjct: 409 IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALH 468
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
G A++A++ F+ M + I P+ + FIG+L AC H G+++ G+ FS M + + P+ +H
Sbjct: 469 GDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKH 528
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
Y MVDL RA LL +A L+ESMP + +WG+L+ C++HG VELGE AAK++LEL+
Sbjct: 529 YSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD 588
Query: 550 PDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYH 609
P G V+L +Y + W D R+ M +G+ K S +E+N V F++ D+
Sbjct: 589 PSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSR 648
Query: 610 KQSREIYKKL 619
+S +IY +L
Sbjct: 649 PESEKIYDRL 658
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/543 (37%), Positives = 319/543 (58%), Gaps = 7/543 (1%)
Query: 152 PFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKT 211
P + L Y++ +I + +F + D + I+ +G DQ LY ++ +
Sbjct: 64 PVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLS 123
Query: 212 SDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDL 271
S+ P+ ++L +C + GK IH ++ GL + ++ + LV++Y G +
Sbjct: 124 SEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVS 179
Query: 272 ARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQP 331
A++++D++ + LV STAM++ YAK G V+ AR +FD + E+D+V W+ MI GYA+ P
Sbjct: 180 AQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFP 239
Query: 332 QEALKLFNEMQLRNIV-PDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNA 390
+AL LF ++ PD+IT+++A+SAC+ +GAL RWIH + + ++ V
Sbjct: 240 NDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTG 299
Query: 391 LIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE-EDIEP 449
LIDMY+KCG+L A VF + PRK++++W++MI +AMHGY+ A+ LF+ M+ ++P
Sbjct: 300 LIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQP 359
Query: 450 NGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMEL 509
+ FIG L AC+HAGLV EG ++F SM E+GI P+ EHYGC+V L RA L++A E
Sbjct: 360 TDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYET 419
Query: 510 IESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRW 569
I++M + ++W S++ +C++HG+ LG+ A+ ++ L + G V+LSNIYA +
Sbjct: 420 IKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDY 479
Query: 570 NDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLV 629
V +R M KGI KE S +EI N+VH F DR H +S+EIY L ++ +K
Sbjct: 480 EGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSH 539
Query: 630 SYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSF 689
Y P+T+ HSE+LA+ YGLIS + S ++I KNLR+C DCH+
Sbjct: 540 GYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLIST-KPGSPLKIFKNLRVCSDCHTV 598
Query: 690 MKL 692
KL
Sbjct: 599 TKL 601
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Query: 98 PQNTLFLYQKLRRVGXXX-XXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQT 156
P + L L+QKL G A S+ AL G IH + + T
Sbjct: 239 PNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCT 298
Query: 157 GLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMK-TSDTK 215
GLI MYS C + +A LVF+ +D V WN MI GY G L+L+ EM+ + +
Sbjct: 299 GLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQ 358
Query: 216 PDGVILCTVLSACGHSGNLSYGKAIHE 242
P + L AC H+G ++ G I E
Sbjct: 359 PTDITFIGTLQACAHAGLVNEGIRIFE 385
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/561 (36%), Positives = 325/561 (57%), Gaps = 7/561 (1%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMD--ARLVFDKMSHRDAVTWNIMIDGYCQ 195
+IHG + G +I T LI + MD AR V + + R+ W +I GY
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAI 126
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
G +D+ + +Y M+ + P +L ACG +L+ G+ H ++
Sbjct: 127 EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYV 186
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
+ +++MYV C ++D AR+++D++ + ++ T +++ YA+ G ++ A +F+ + KD+
Sbjct: 187 GNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDM 246
Query: 316 VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTY 375
V W+AM++G+A++ +PQEAL+ F+ M+ I D++T+ ISACA +GA A
Sbjct: 247 VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI 306
Query: 376 ADKNGFGRS--LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYAN 433
A K+G+ S + + +ALIDMY+KCGN+ A VF +M KNV ++SSMI A HG A
Sbjct: 307 AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQ 366
Query: 434 SAMNLFHRM-KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
A++LFH M + +I+PN V F+G L ACSH+GLV++G+++F SM G+ P +HY C
Sbjct: 367 EALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTC 426
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
MVDL R L++A+ELI++M P+ +WG+L+ AC++H E+ E AA+ + ELEPD
Sbjct: 427 MVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDI 486
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASS-RVEINNEVHVFMMADRYHKQ 611
G ++LSN+YA W V +R+ + KG+ K A S V+ N ++H F + H
Sbjct: 487 IGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPM 546
Query: 612 SREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKE 671
S +I KLEE+V L ++ Y P S H+EKLAL + L++ R +
Sbjct: 547 SNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNR-D 605
Query: 672 SCIRIVKNLRICEDCHSFMKL 692
S I I+KNLR+C DCH FM+L
Sbjct: 606 STITIMKNLRMCLDCHKFMRL 626
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 186/495 (37%), Gaps = 83/495 (16%)
Query: 32 QLKQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLRL 91
Q+KQIH +LR V + + ++R
Sbjct: 64 QIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRG 123
Query: 92 LSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSD 151
+ + +Y +R+ KA L LG + H +L
Sbjct: 124 YAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF 183
Query: 152 PFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKT 211
++ +I MY C I AR VFD+M RD ++W +I Y + GN + +L+E + T
Sbjct: 184 VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT 243
Query: 212 SD--------------TKP-----------------DGVILCTVLSACGHSGNLSYGKAI 240
D KP D V + +SAC G Y
Sbjct: 244 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 303
Query: 241 HEFIMDNGLALSAH--LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHG 298
+ +G + S H + SAL++MY CG ++ A ++ +++K++ ++M+ G A HG
Sbjct: 304 VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHG 363
Query: 299 MVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN-IVPDQITMLSAI 357
+ QEAL LF+ M + I P+ +T + A+
Sbjct: 364 -------------------------------RAQEALHLFHYMVTQTEIKPNTVTFVGAL 392
Query: 358 SACANVGALAQARWIHTYADKNGFGRSLSVN--NALIDMYAKCGNLIRAKEVFENM---P 412
AC++ G + Q R + + FG + + ++D+ + G L A E+ + M P
Sbjct: 393 MACSHSGLVDQGRQVFDSMYQT-FGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEP 451
Query: 413 RKNVISWSSMINAFAMHGYAN----SAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVE 468
V W +++ A +H +A +LF E DI N ++ V + G V
Sbjct: 452 HGGV--WGALLGACRIHNNPEIAEIAAEHLFEL--EPDIIGNYILLSNVYASAGDWGGVL 507
Query: 469 EGQKLFSSMINEHGI 483
+KL I E G+
Sbjct: 508 RVRKL----IKEKGL 518
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 146/354 (41%), Gaps = 70/354 (19%)
Query: 219 VILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGA-MD-LARELY 276
+++ +++S NL+ K IH ++ GL S ++ + L+ G MD AR +
Sbjct: 47 LLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVI 106
Query: 277 DKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALK 336
+ + ++ + TA++ GYA G FD EA+
Sbjct: 107 EPVQFRNPFLWTAVIRGYAIEGK-------FD------------------------EAIA 135
Query: 337 LFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADK-NGFGRSLSVNNALIDMY 395
++ M+ I P T + + AC + L R H + GF + V N +IDMY
Sbjct: 136 MYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFC-FVYVGNTMIDMY 194
Query: 396 AKC-------------------------------GNLIRAKEVFENMPRKNVISWSSMIN 424
KC GN+ A E+FE++P K++++W++M+
Sbjct: 195 VKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVT 254
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
FA + A+ F RM++ I + V G + AC+ G + + + + G +
Sbjct: 255 GFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV-QIAQKSGYS 313
Query: 485 PR-HEHYG-CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
P H G ++D+Y + + +A+ + SM NV + S++ HG +
Sbjct: 314 PSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN-NKNVFTYSSMILGLATHGRAQ 366
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/659 (31%), Positives = 359/659 (54%), Gaps = 40/659 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
V IP+P + + L+ L+++ ++ ++ ++ G K ++ SA
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+G +IH ++ G D F+Q + MY C R+ DAR VFD+MS +D VT + ++
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 193 YCQSGNYDQVLKLYEEMKTSDTK-----------------------------------PD 217
Y + G ++V+++ EM++S + PD
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 218 GVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYD 277
V + +VL + G S L+ G+ IH +++ GL + SA+++MY G + L++
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 278 KLSSKHLVVSTAMLSGYAKHGMVKDARFIFD----QIVEKDLVCWSAMISGYAESDQPQE 333
+ V A ++G +++G+V A +F+ Q +E ++V W+++I+G A++ + E
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 334 ALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALID 393
AL+LF EMQ+ + P+ +T+ S + AC N+ AL R H +A + ++ V +ALID
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID 431
Query: 394 MYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVI 453
MYAKCG + ++ VF MP KN++ W+S++N F+MHG A M++F + ++P+ +
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 454 FIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
F +L AC GL +EG K F M E+GI PR EHY CMV+L RA L++A +LI+ M
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Query: 514 PFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVG 573
PF P+ +WG+L+++C++ V+L E AA+++ LEP++ G V+LSNIYA + W +V
Sbjct: 552 PFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVD 611
Query: 574 LIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTP 633
IR M + G+ K S +++ N V+ + D+ H Q +I +K++E+ E++ + P
Sbjct: 612 SIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRP 671
Query: 634 STSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
+ HSEKLA+ +GL++ + ++++KNLRIC DCH+ +K
Sbjct: 672 NLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNT-PDGTPLQVIKNLRICGDCHAVIKF 729
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 212/461 (45%), Gaps = 55/461 (11%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
+ H K G +D +I LIA YS DA LV + +++ +I ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 198 NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
+ Q + ++ M + PD +L + C GK IH +GL + A +Q
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI----VEK 313
++ +MY+ CG M AR+++D++S K +V +A+L YA+ G +++ I ++ +E
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
++V W+ ++SG+ S +EA+ +F ++ PDQ+T+ S + + + L R IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 374 TYADKNGFGRSLSVNNALIDMYAKCGNLI------------------------------- 402
Y K G + V +A+IDMY K G++
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 403 RAKEVFENMPRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVL 458
+A E+FE + NV+SW+S+I A +G A+ LF M+ ++PN V +L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 459 YACSHAGLVEEGQKLFSSMINEHGIAPR-----HEHYG-CMVDLYCRANLLRKAMELIES 512
AC + + G+ + HG A R + H G ++D+Y + + + +
Sbjct: 396 PACGNIAALGHGR-------STHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 513 MPFAPNVIIWGSLMSACQVHGEVE--LGEFAAKQILELEPD 551
MP N++ W SLM+ +HG+ + + F + L+PD
Sbjct: 449 MP-TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/621 (33%), Positives = 336/621 (54%), Gaps = 36/621 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKL-RRVGXXXXXXXXXXXXKAVSKAS 131
VF ++P DT N ++ ++ ++ +++ L AV++
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
L LG++IH LA+K G +S ++ TG I++YS C +I +F + D V +N MI
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
GY +G + L L++E+ S + L +++ GH L AIH G L
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH---LMLIYAIH------GYCL 346
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
++ S H VSTA+ + Y+K ++ AR +FD+
Sbjct: 347 KSNFLS-------------------------HASVSTALTTVYSKLNEIESARKLFDESP 381
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
EK L W+AMISGY ++ ++A+ LF EMQ P+ +T+ +SACA +GAL+ +W
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
+H F S+ V+ ALI MYAKCG++ A+ +F+ M +KN ++W++MI+ + +HG
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 501
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
A+N+F+ M I P V F+ VLYACSHAGLV+EG ++F+SMI+ +G P +HY
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPD 551
CMVD+ RA L++A++ IE+M P +W +L+ AC++H + L ++++ EL+PD
Sbjct: 562 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPD 621
Query: 552 HDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQ 611
+ G V+LSNI++ +R + +RQ+ + ++K + +EI HVF D+ H Q
Sbjct: 622 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 681
Query: 612 SREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKE 671
+EIY+KLE++ +++ Y P T HSE+LA+ +GLI+
Sbjct: 682 VKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGT 741
Query: 672 SCIRIVKNLRICEDCHSFMKL 692
IRI+KNLR+C DCH+ KL
Sbjct: 742 E-IRIIKNLRVCLDCHTVTKL 761
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 175/433 (40%), Gaps = 77/433 (17%)
Query: 147 GFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLY 206
GF +D + T L S I AR +F + D +N+++ G+ + + L ++
Sbjct: 47 GFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVF 106
Query: 207 EEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVN 265
+ K++D KP+ +SA + G+ IH + +G L S +V MY
Sbjct: 107 AHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYF- 165
Query: 266 CGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGY 325
K V+DAR +FD++ EKD + W+ MISGY
Sbjct: 166 ------------------------------KFWRVEDARKVFDRMPEKDTILWNTMISGY 195
Query: 326 AESDQPQEALKLFNEMQLRNIVP-DQITMLSAISACANVGALAQARWIHTYADKNGFGRS 384
+++ E++++F ++ + D T+L + A A + L IH+ A K G
Sbjct: 196 RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSH 255
Query: 385 LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE 444
V I +Y+KCG + +F + +++++++MI+ + +G +++LF +
Sbjct: 256 DYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 445 EDIEPNGVIFIG---------VLYAC----------SHAGL-------------VEEGQK 472
+ ++YA SHA + +E +K
Sbjct: 316 SGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARK 375
Query: 473 LFSSMINEHGIAPRHE--HYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMS 527
LF +P + M+ Y + L A+ L M F+PN + ++S
Sbjct: 376 LFDE-------SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS 428
Query: 528 ACQVHGEVELGEF 540
AC G + LG++
Sbjct: 429 ACAQLGALSLGKW 441
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 113/251 (45%), Gaps = 4/251 (1%)
Query: 298 GMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEM-QLRNIVPDQITMLSA 356
G + AR IF + D+ ++ ++ G++ ++ P +L +F + + ++ P+ T A
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 357 ISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNV 416
ISA + R IH A +G L + + ++ MY K + A++VF+ MP K+
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 417 ISWSSMINAFAMHGYANSAMNLFHRMKEED-IEPNGVIFIGVLYACSHAGLVEEGQKLFS 475
I W++MI+ + + ++ +F + E + + +L A + + G ++
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQI-H 244
Query: 476 SMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEV 535
S+ + G + LY + ++ L P+++ + +++ +GE
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGYTSNGET 303
Query: 536 ELGEFAAKQIL 546
EL K+++
Sbjct: 304 ELSLSLFKELM 314
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/562 (34%), Positives = 326/562 (58%), Gaps = 7/562 (1%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F +P D N ++ ++ + L + + + G A S +
Sbjct: 108 LFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLND 167
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+ G+++H L +K F SD +I + L+ MYS C + DA+ VFD+M R+ V+WN +I
Sbjct: 168 MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITC 227
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNG-LAL 251
+ Q+G + L +++ M S +PD V L +V+SAC + G+ +H ++ N L
Sbjct: 228 FEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRN 287
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
L +A V+MY C + AR ++D + ++++ T+M+SGYA K AR +F ++
Sbjct: 288 DIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMA 347
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
E+++V W+A+I+GY ++ + +EAL LF ++ ++ P + + + ACA++ L
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQ 407
Query: 372 IHTYADKNGFG------RSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINA 425
H + K+GF + V N+LIDMY KCG + VF M ++ +SW++MI
Sbjct: 408 AHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIG 467
Query: 426 FAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAP 485
FA +GY N A+ LF M E +P+ + IGVL AC HAG VEEG+ FSSM + G+AP
Sbjct: 468 FAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAP 527
Query: 486 RHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQI 545
+HY CMVDL RA L +A +IE MP P+ +IWGSL++AC+VH + LG++ A+++
Sbjct: 528 LRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKL 587
Query: 546 LELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMA 605
LE+EP + G V+LSN+YA+ +W DV +R+SM +G++K+ S ++I HVFM+
Sbjct: 588 LEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVK 647
Query: 606 DRYHKQSREIYKKLEEVVSELK 627
D+ H + ++I+ L+ +++E++
Sbjct: 648 DKSHPRKKQIHSLLDILIAEMR 669
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 184/329 (55%), Gaps = 9/329 (2%)
Query: 203 LKLYEEMKT-SDTKPDGVILCTVLSACGHSGNLS--YGKAIHEFIMDNGLALSAHLQSAL 259
LKL ++ + +D+ P +L +C S LS Y + +H ++ +G + +Q+ L
Sbjct: 7 LKLAADLSSFTDSSP----FAKLLDSCIKS-KLSAIYVRYVHASVIKSGFSNEIFIQNRL 61
Query: 260 VNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWS 319
++ Y CG+++ R+++DK+ +++ ++++G K G + +A +F + E+D W+
Sbjct: 62 IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121
Query: 320 AMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKN 379
+M+SG+A+ D+ +EAL F M V ++ + S +SAC+ + + + +H+ K+
Sbjct: 122 SMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKS 181
Query: 380 GFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLF 439
F + + +AL+DMY+KCGN+ A+ VF+ M +NV+SW+S+I F +G A A+++F
Sbjct: 182 PFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF 241
Query: 440 HRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCR 499
M E +EP+ V V+ AC+ ++ GQ++ ++ + VD+Y +
Sbjct: 242 QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAK 301
Query: 500 ANLLRKAMELIESMPFAPNVIIWGSLMSA 528
+ +++A + +SMP NVI S++S
Sbjct: 302 CSRIKEARFIFDSMPIR-NVIAETSMISG 329
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 194/416 (46%), Gaps = 78/416 (18%)
Query: 128 SKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWN 187
SK SA+Y+ +H K GF ++ FIQ LI YS C + D R VFDKM R+ TWN
Sbjct: 32 SKLSAIYVRY-VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWN 90
Query: 188 IMIDGYCQSGNYDQVLKLYEEMKTSDT--------------------------KPDGVIL 221
++ G + G D+ L+ M D +G +L
Sbjct: 91 SVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVL 150
Query: 222 -----CTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELY 276
+VLSAC +++ G +H I + ++ SALV+MY CG ++ A+ ++
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210
Query: 277 DKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALK 336
D++ +++V W+++I+ + ++ EAL
Sbjct: 211 DEMGDRNVV-------------------------------SWNSLITCFEQNGPAVEALD 239
Query: 337 LFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS-LSVNNALIDMY 395
+F M + PD++T+ S ISACA++ A+ + +H KN R+ + ++NA +DMY
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 396 AKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFI 455
AKC + A+ +F++MP +NVI+ +SMI+ +AM +A +F +M E ++ V +
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV----VSWN 355
Query: 456 GVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIE 511
++ + G EE LF ++ + P H Y AN+L+ +L E
Sbjct: 356 ALIAGYTQNGENEEALSLF-CLLKRESVCPTH---------YSFANILKACADLAE 401
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/576 (34%), Positives = 321/576 (55%), Gaps = 41/576 (7%)
Query: 158 LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPD 217
L+ Y++ + + AR VFD++ R+ + N+MI Y +G Y + +K++ M + +PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 218 GVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYD 277
VL AC SG + G+ IH GL+ + + + LV+MY CG + AR + D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 278 KLSSKHLVVSTAMLSGYAKHGMVKDA---------------------------------- 303
++S + +V +++ GYA++ DA
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 304 ---RFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISAC 360
+ +F ++ +K LV W+ MI Y ++ P EA++L++ M+ PD +++ S + AC
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 361 ANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWS 420
+ AL+ + IH Y ++ +L + NALIDMYAKCG L +A++VFENM ++V+SW+
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 421 SMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINE 480
+MI+A+ G A+ LF ++++ + P+ + F+ L ACSHAGL+EEG+ F M +
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 481 HGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEF 540
+ I PR EH CMVDL RA +++A I+ M PN +WG+L+ AC+VH + ++G
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 541 AAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVH 600
AA ++ +L P+ G V+LSNIYAK RW +V IR M +KG+ K +S VE+N +H
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 601 VFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLAL 660
F++ DR H QS EIY++L+ +V ++K + Y P + HSEKLA+
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAI 619
Query: 661 CYGLISKRRKE----SCIRIVKNLRICEDCHSFMKL 692
+ L++ + +E + IRI KNLRIC DCH KL
Sbjct: 620 VFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKL 655
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 175/346 (50%), Gaps = 43/346 (12%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
KA S + + +G +IHG A+K+G S F+ GL++MY C + +ARLV D+MS RD V
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSG--NLSYGKAI-- 240
+WN ++ GY Q+ +D L++ EM++ D + ++L A ++ N+ Y K +
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFF 267
Query: 241 ---HEFIMDNGLALSAHLQSAL----VNMYVN-------------------CG---AMDL 271
+ ++ + + ++++A+ V +Y CG A+ L
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
Query: 272 ARELYDKLSSKHLV----VSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAE 327
++++ + K L+ + A++ YAK G ++ AR +F+ + +D+V W+AMIS Y
Sbjct: 328 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 387
Query: 328 SDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR-WIHTYADKNGFGRSLS 386
S + +A+ LF+++Q +VPD I ++ ++AC++ G L + R D L
Sbjct: 388 SGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLE 447
Query: 387 VNNALIDMYAKCGNLIRAKEVFENM---PRKNVISWSSMINAFAMH 429
++D+ + G + A ++M P + V W +++ A +H
Sbjct: 448 HLACMVDLLGRAGKVKEAYRFIQDMSMEPNERV--WGALLGACRVH 491
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N ++ + ++ P + LY ++ G A SAL LG +IHG +
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 337
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL 205
+ ++ LI MY+ C + AR VF+ M RD V+W MI Y SG + L
Sbjct: 338 KKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVAL 397
Query: 206 YEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVN 265
+ +++ S PD + T L+AC H+G L G++ + + D+ ++ L+
Sbjct: 398 FSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH-YKITPRLE--------- 447
Query: 266 CGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDA-RFIFDQIVEKDLVCWSAMISG 324
HL +L + G VK+A RFI D +E + W A++
Sbjct: 448 -----------------HLACMVDLL---GRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Query: 325 ---YAESDQPQEALKLFNEMQLRNIVPDQ---ITMLSAISACANVGALAQARW 371
++++D + L +L + P+Q +LS I A A RW
Sbjct: 488 CRVHSDTD-----IGLLAADKLFQLAPEQSGYYVLLSNIYAKA-------GRW 528
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 327 ESDQ--PQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS 384
E DQ PQE + L Q+ + PD T+ R +H+ +
Sbjct: 32 ELDQKSPQETVFLLG--QVLDTYPDIRTL----------------RTVHSRIILEDLRCN 73
Query: 385 LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE 444
S+ L+ YA ++ A++VF+ +P +NVI + MI ++ +G+ + +F M
Sbjct: 74 SSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCG 133
Query: 445 EDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLR 504
++ P+ F VL ACS +G + G+K+ S + G++ +V +Y + L
Sbjct: 134 CNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA-TKVGLSSTLFVGNGLVSMYGKCGFLS 192
Query: 505 KAMELIESMPFAPNVIIWGSLM 526
+A +++ M +V+ W SL+
Sbjct: 193 EARLVLDEMS-RRDVVSWNSLV 213
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/523 (38%), Positives = 302/523 (57%), Gaps = 33/523 (6%)
Query: 171 ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGH 230
AR +F+ MS D V +N M GY + N +V L+ E+ PD ++L AC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 231 SGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAM 290
+ L G+ +H M GL + ++ L+NMY C +D
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVD-------------------- 181
Query: 291 LSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQ 350
AR +FD+IVE +VC++AMI+GYA ++P EAL LF EMQ + + P++
Sbjct: 182 -----------SARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNE 230
Query: 351 ITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFEN 410
IT+LS +S+CA +G+L +WIH YA K+ F + + VN ALIDM+AKCG+L A +FE
Sbjct: 231 ITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEK 290
Query: 411 MPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEG 470
M K+ +WS+MI A+A HG A +M +F RM+ E+++P+ + F+G+L ACSH G VEEG
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEG 350
Query: 471 QKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQ 530
+K FS M+++ GI P +HYG MVDL RA L A E I+ +P +P ++W L++AC
Sbjct: 351 RKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACS 410
Query: 531 VHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKAS 590
H ++L E +++I EL+ H G V+LSN+YA+ ++W V +R+ M ++ K
Sbjct: 411 SHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGC 470
Query: 591 SRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXX-XXXXXXXXXX 649
S +E+NN VH F D + ++++ L+E+V ELKL Y P TS
Sbjct: 471 SSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEI 530
Query: 650 XXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
+HSEKLA+ +GL++ + IR+VKNLR+C DCH+ KL
Sbjct: 531 TLRYHSEKLAITFGLLNT-PPGTTIRVVKNLRVCRDCHNAAKL 572
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 180/391 (46%), Gaps = 34/391 (8%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F + PD N + R SR P L+ ++ G KA + A A
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L G ++H L+ KLG + ++ LI MY+ C + AR VFD++ V +N MI G
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITG 204
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y + ++ L L+ EM+ KP+ + L +VLS+C G+L GK IH++ +
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY 264
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ +AL++M+ CG++D A +++K+ K +AM+ YA HG
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG-------------- 310
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR-W 371
+ ++++ +F M+ N+ PD+IT L ++AC++ G + + R +
Sbjct: 311 -----------------KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKY 353
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMHG 430
K G S+ +++D+ ++ GNL A E + +P + W ++ A + H
Sbjct: 354 FSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
Query: 431 YANSAMNLFHRMKEEDIEPNG-VIFIGVLYA 460
+ A + R+ E D G + + LYA
Sbjct: 414 NLDLAEKVSERIFELDDSHGGDYVILSNLYA 444
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/619 (34%), Positives = 327/619 (52%), Gaps = 33/619 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++P D N ++ S++ + L + + + AVS
Sbjct: 192 VFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+ +G EIHG A + GF S I T L+ MY+ C + AR +FD M R+ V+WN MID
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y Q+ N + + ++++M KP V + L AC G+L G+ IH+ ++ GL +
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ ++L++MY C +D A ++ KL S
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQS------------------------------- 400
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
+ LV W+AMI G+A++ +P +AL F++M+ R + PD T +S I+A A + A+WI
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H ++ +++ V AL+DMYAKCG ++ A+ +F+ M ++V +W++MI+ + HG+
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
+A+ LF M++ I+PNGV F+ V+ ACSH+GLVE G K F M + I +HYG
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
MVDL RA L +A + I MP P V ++G+++ ACQ+H V E AA+++ EL PD
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQS 612
G V+L+NIY W VG +R SM +G+ K S VEI NEVH F H S
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700
Query: 613 REIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKES 672
++IY LE+++ +K Y P T+ HSEKLA+ +GL++ +
Sbjct: 701 KKIYAFLEKLICHIKEAGYVPDTN-LVLGVENDVKEQLLSTHSEKLAISFGLLNT-TAGT 758
Query: 673 CIRIVKNLRICEDCHSFMK 691
I + KNLR+C DCH+ K
Sbjct: 759 TIHVRKNLRVCADCHNATK 777
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 215/427 (50%), Gaps = 35/427 (8%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
+I L K G + + F QT L++++ + +A VF+ + + V ++ M+ G+ +
Sbjct: 55 QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVS 114
Query: 198 NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
+ D+ L+ + M+ D +P +L CG L GK IH ++ +G +L +
Sbjct: 115 DLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMT 174
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC 317
L NMY C R+ V +AR +FD++ E+DLV
Sbjct: 175 GLENMYAKC------RQ-------------------------VNEARKVFDRMPERDLVS 203
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
W+ +++GY+++ + AL++ M N+ P IT++S + A + + ++ + IH YA
Sbjct: 204 WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
++GF ++++ AL+DMYAKCG+L A+++F+ M +NV+SW+SMI+A+ + AM
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAML 323
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLY 497
+F +M +E ++P V +G L+AC+ G +E G + + E G+ ++ +Y
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMY 382
Query: 498 CRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEV--ELGEFAAKQILELEPDHDGA 555
C+ + A + + + ++ W +++ +G L F+ + ++PD
Sbjct: 383 CKCKEVDTAASMFGKLQ-SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 441
Query: 556 LVVLSNI 562
+ V++ I
Sbjct: 442 VSVITAI 448
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 97/223 (43%), Gaps = 4/223 (1%)
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR 403
RN +P + A +L + R I KNG + L+ ++ + G++
Sbjct: 28 RNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87
Query: 404 AKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
A VFE + K + + +M+ FA + A+ F RM+ +D+EP F +L C
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGD 147
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWG 523
+ G+++ ++ + G + + ++Y + + +A ++ + MP +++ W
Sbjct: 148 EAELRVGKEIHGLLV-KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWN 205
Query: 524 SLMSACQVHGEVELGEFAAKQILE--LEPDHDGALVVLSNIYA 564
++++ +G + K + E L+P + VL + A
Sbjct: 206 TIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/519 (37%), Positives = 301/519 (57%), Gaps = 3/519 (0%)
Query: 171 ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTS--DTKPDGVILCTVLSAC 228
A + D+ N MI +C+S ++ Y + +S D KPD + ++ AC
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 229 GHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVST 288
G +H + G H+Q+ L+++Y G +D ++++ + V T
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 289 AMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVP 348
AM++ A+ G V AR +F+ + E+D + W+AMISGYA+ + +EAL +F+ MQL +
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 349 DQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVF 408
+ + M+S +SAC +GAL Q RW H+Y ++N ++ + L+D+YAKCG++ +A EVF
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF 298
Query: 409 ENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVE 468
M KNV +WSS +N AM+G+ + LF MK++ + PN V F+ VL CS G V+
Sbjct: 299 WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVD 358
Query: 469 EGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
EGQ+ F SM NE GI P+ EHYGC+VDLY RA L A+ +I+ MP P+ +W SL+ A
Sbjct: 359 EGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Query: 529 CQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEK 588
+++ +ELG A+K++LELE + GA V+LSNIYA W++V +RQSM +KG+ K+
Sbjct: 419 SRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQP 478
Query: 589 ASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXX 648
S +E+N EVH F + D+ H + +I +++ L+L Y T+
Sbjct: 479 GCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKE 538
Query: 649 XXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCH 687
HSEK A+ +G++S +++ IRIVKNLR+C DCH
Sbjct: 539 DALCLHSEKAAIAFGIMS-LKEDVPIRIVKNLRVCGDCH 576
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 177/393 (45%), Gaps = 68/393 (17%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXX--XXXXXXXXKAVSKA 130
+ + P N ++R +SP P+ + Y+++ G +A +
Sbjct: 62 ILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGL 121
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGLIAMY---------------------------- 162
GL++HG+ + GF +DP +QTGLI++Y
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMV 181
Query: 163 SACRRIMD---ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGV 219
+AC R D AR +F+ M RD + WN MI GY Q G + L ++ M+ K +GV
Sbjct: 182 TACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGV 241
Query: 220 ILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL 279
+ +VLSAC G L G+ H +I N + ++ L + LV++Y CG M+ A E
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAME----- 296
Query: 280 SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFN 339
+F + EK++ WS+ ++G A + ++ L+LF+
Sbjct: 297 --------------------------VFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFS 330
Query: 340 EMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFG--RSLSVNNALIDMYAK 397
M+ + P+ +T +S + C+ VG + + + H + +N FG L L+D+YA+
Sbjct: 331 LMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEPQLEHYGCLVDLYAR 389
Query: 398 CGNLIRAKEVFENMPRK-NVISWSSMINAFAMH 429
G L A + + MP K + WSS+++A M+
Sbjct: 390 AGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMY 422
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/536 (36%), Positives = 315/536 (58%), Gaps = 13/536 (2%)
Query: 158 LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPD 217
L+ + ++I++AR FD M+ RD V+WN +I GY QSG D+ +L++E D
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD---- 280
Query: 218 GVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYD 277
V T + + G+ N +A F D + +A++ YV M++A+EL+D
Sbjct: 281 -VFTWTAMVS-GYIQNRMVEEARELF--DKMPERNEVSWNAMLAGYVQGERMEMAKELFD 336
Query: 278 KLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKL 337
+ +++ M++GYA+ G + +A+ +FD++ ++D V W+AMI+GY++S EAL+L
Sbjct: 337 VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRL 396
Query: 338 FNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAK 397
F +M+ ++ + SA+S CA+V AL + +H K G+ V NAL+ MY K
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456
Query: 398 CGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGV 457
CG++ A ++F+ M K+++SW++MI ++ HG+ A+ F MK E ++P+ + V
Sbjct: 457 CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 458 LYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAP 517
L ACSH GLV++G++ F +M ++G+ P +HY CMVDL RA LL A L+++MPF P
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576
Query: 518 NVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQ 577
+ IWG+L+ A +VHG EL E AA +I +EP++ G V+LSN+YA RW DVG +R
Sbjct: 577 DAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRV 636
Query: 578 SMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSG 637
M +KG+ K S +EI N+ H F + D +H + EI+ LEE+ +K Y TS
Sbjct: 637 RMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSV 696
Query: 638 XXXXXXXXXXXXXXXWHSEKLALCYGL--ISKRRKESCIRIVKNLRICEDCHSFMK 691
+HSE+LA+ YG+ +S R IR++KNLR+CEDCH+ +K
Sbjct: 697 VLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRP---IRVIKNLRVCEDCHNAIK 749
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 215/440 (48%), Gaps = 55/440 (12%)
Query: 156 TGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTK 215
G+I+ Y AR +FD+M RD V+WN+MI GY ++ N + +L+E M D
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV- 157
Query: 216 PDGVILCTVLSACGHSGNLSYGKAIHEFIMD------NGLALSAHLQSA----------- 258
T+LS +G + +++ + + + N L LSA++Q++
Sbjct: 158 ---CSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL-LSAYVQNSKMEEACMLFKS 213
Query: 259 -----------LVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIF 307
L+ +V + AR+ +D ++ + +V +++GYA+ G + +AR +F
Sbjct: 214 RENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF 273
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
D+ +D+ W+AM+SGY ++ +EA +LF++M RN +++ + ++ +
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN----EVSWNAMLAGYVQGERME 329
Query: 368 QARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFA 427
A+ + R++S N +I YA+CG + AK +F+ MP+++ +SW++MI ++
Sbjct: 330 MAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 385
Query: 428 MHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
G++ A+ LF +M+ E N F L C+ +E G++L ++
Sbjct: 386 QSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG------G 439
Query: 488 EHYGCMVD-----LYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVH--GEVELGEF 540
GC V +YC+ + +A +L + M +++ W ++++ H GEV L F
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 541 AAKQILELEPDHDGALVVLS 560
+ + L+PD + VLS
Sbjct: 499 ESMKREGLKPDDATMVAVLS 518
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 160/346 (46%), Gaps = 34/346 (9%)
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEM- 209
D F T +++ Y R + +AR +FDKM R+ V+WN M+ GY Q + +L++ M
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 210 ----KTSDTKPDGVILCTVLSA--------------------CGHSGNLSYGKAIHEFIM 245
T +T G C +S G+S + +A+ F+
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 246 --DNGLALSAHLQSALVNMYVNCGAMDLARELYDKL----SSKHLVVSTAMLSGYAKHGM 299
G L+ S+ ++ + A++L ++L+ +L V A+L Y K G
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 300 VKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISA 359
+++A +F ++ KD+V W+ MI+GY+ + AL+ F M+ + PD TM++ +SA
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 360 CANVGALAQAR-WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVI 417
C++ G + + R + +T G + ++D+ + G L A + +NMP +
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA 579
Query: 418 SWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGV-IFIGVLYACS 462
W +++ A +HG A ++ + E +G+ + + LYA S
Sbjct: 580 IWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASS 625
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++P D ++ S+S L L+ ++ R G + A
Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L LG ++HG K G+ + F+ L+ MY C I +A +F +M+ +D V+WN MI G
Sbjct: 425 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAG 484
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKA-IHEFIMDNGLAL 251
Y + G + L+ +E MK KPD + VLSAC H+G + G+ + D G+
Sbjct: 485 YSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP 544
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAK-HGMVKDARFIFDQI 310
++ + +V++ G ++ A L + + L G ++ HG + A D+I
Sbjct: 545 NSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKI 604
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/521 (38%), Positives = 305/521 (58%), Gaps = 11/521 (2%)
Query: 182 DAVTWNIMIDGYCQSGNYDQ---VLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGK 238
++ WNI+I + + Q + +Y M+ PD +L + + +L G+
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 239 AIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHG 298
H I+ GL ++++L+NMY +CG + A+ ++D SK L ++++ YAK G
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 299 MVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN-----IVPDQITM 353
++ DAR +FD++ E++++ WS +I+GY + +EAL LF EMQL + P++ TM
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM-P 412
+ +SAC +GAL Q +W+H Y DK + + ALIDMYAKCG+L RAK VF +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 413 RKNVISWSSMINAFAMHGYANSAMNLFHRMKEED-IEPNGVIFIGVLYACSHAGLVEEGQ 471
+K+V ++S+MI AM+G + LF M D I PN V F+G+L AC H GL+ EG+
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 472 KLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQV 531
F MI E GI P +HYGCMVDLY R+ L+++A I SMP P+V+IWGSL+S ++
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 532 HGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASS 591
G+++ E A K+++EL+P + GA V+LSN+YAK RW +V IR M KGI+K S
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 442
Query: 592 RVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXX 651
VE+ VH F++ D ++S IY L+E++ L+ Y T
Sbjct: 443 YVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIAL 502
Query: 652 XWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
+HSEKLA+ + L+ K R + +RI+KNLRIC DCH MK+
Sbjct: 503 SYHSEKLAIAFCLM-KTRPGTPVRIIKNLRICGDCHLVMKM 542
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 163/368 (44%), Gaps = 70/368 (19%)
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSAC------RRIM----------------- 169
L LG H G DPF++T L+ MYS+C +R+
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 170 --------DARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD-----TKP 216
DAR +FD+M R+ ++W+ +I+GY G Y + L L+ EM+ +P
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 217 DGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELY 276
+ + TVLSACG G L GK +H +I + + L +AL++MY CG+++ A+ ++
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 277 DKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALK 336
+ L SK KD+ +SAMI A E +
Sbjct: 258 NALGSK------------------------------KDVKAYSAMICCLAMYGLTDECFQ 287
Query: 337 LFNEMQLR-NIVPDQITMLSAISACANVGALAQAR-WIHTYADKNGFGRSLSVNNALIDM 394
LF+EM NI P+ +T + + AC + G + + + + ++ G S+ ++D+
Sbjct: 288 LFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDL 347
Query: 395 YAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGV- 452
Y + G + A+ +MP +V+ W S+++ M G + R+ E D +G
Sbjct: 348 YGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAY 407
Query: 453 IFIGVLYA 460
+ + +YA
Sbjct: 408 VLLSNVYA 415
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 7/228 (3%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKM-SHRDAV 184
A + AL G +H K D + T LI MY+ C + A+ VF+ + S +D
Sbjct: 208 ACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVK 267
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDT-KPDGVILCTVLSACGHSGNLSYGKAIHEF 243
++ MI G D+ +L+ EM TSD P+ V +L AC H G ++ GK+ +
Sbjct: 268 AYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKM 327
Query: 244 IMDN-GLALSAHLQSALVNMYVNCGAMDLARELYDKLS-SKHLVVSTAMLSGYAKHGMVK 301
+++ G+ S +V++Y G + A + +++ ++LSG G +K
Sbjct: 328 MIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIK 387
Query: 302 DARFIFDQIVEKDLVCWSAMI---SGYAESDQPQEALKLFNEMQLRNI 346
+++E D + A + + YA++ + E + +EM+++ I
Sbjct: 388 TCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGI 435
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/593 (34%), Positives = 320/593 (53%), Gaps = 39/593 (6%)
Query: 137 LEIHGLASKLGFHSDPFIQTGLIAMYSACRR----IMDARLVFDKMSHRDAVTW------ 186
++ H A K G + L+++YS C + AR VFD++ +D +W
Sbjct: 169 VQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTG 228
Query: 187 --------------------------NIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVI 220
N MI GY G Y + L++ M +S + D
Sbjct: 229 YVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFT 288
Query: 221 LCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLS 280
+V+ AC +G L GK +H +++ S H ++LV++Y CG D AR +++K+
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 281 SKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNE 340
+K LV A+LSGY G + +A+ IF ++ EK+++ W MISG AE+ +E LKLF+
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 341 MQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGN 400
M+ P AI +CA +GA + H K GF SLS NALI MYAKCG
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV 467
Query: 401 LIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYA 460
+ A++VF MP + +SW+++I A HG+ A++++ M ++ I P+ + + VL A
Sbjct: 468 VEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA 527
Query: 461 CSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVI 520
CSHAGLV++G+K F SM + I P +HY ++DL CR+ A +IES+PF P
Sbjct: 528 CSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAE 587
Query: 521 IWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMA 580
IW +L+S C+VHG +ELG AA ++ L P+HDG ++LSN++A +W +V +R+ M
Sbjct: 588 IWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMR 647
Query: 581 NKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXX- 639
++G+ KE A S +E+ +VH F++ D H ++ +Y L+++ E++ + Y P TS
Sbjct: 648 DRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLH 707
Query: 640 XXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
HSEK+A+ +GL+ K + IRI KNLR C DCH+F +
Sbjct: 708 DVESDGHKEDMLTTHSEKIAVAFGLM-KLPPGTTIRIFKNLRTCGDCHNFFRF 759
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 203/452 (44%), Gaps = 46/452 (10%)
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDK--MSHRDAVTWNIMIDGYCQSGNYDQVLKLYEE 208
D +T +++ Y A I AR VF+K + RD V +N MI G+ + + + L+ +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 209 MKTSDTKPDGVILCTVLSACGH-SGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCG 267
MK KPD +VL+ + + H + +G + +ALV++Y C
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 268 A----MDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK-DLVCWSAMI 322
+ + AR+++D++ K T M++GY K+G + + + + LV ++AMI
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 323 SGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYA-DKNGF 381
SGY QEAL++ M I D+ T S I ACA G L + +H Y + F
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 382 GRSLSVNNALIDMYAKCGNLIRAKEVFENMP----------------------------- 412
S +N+L+ +Y KCG A+ +FE MP
Sbjct: 319 --SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 413 --RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEG 470
KN++SW MI+ A +G+ + LF MK E EP F G + +C+ G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 471 QKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQ 530
Q+ + ++ + G ++ +Y + ++ +A ++ +MP + + W +L++A
Sbjct: 437 QQYHAQLL-KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP-CLDSVSWNALIAALG 494
Query: 531 VHGEVELGEFAAKQILE--LEPDHDGALVVLS 560
HG +++L+ + PD L VL+
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 526
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 171/354 (48%), Gaps = 42/354 (11%)
Query: 233 NLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLS 292
+L +A+H I+ G AH+ + L+++Y ++ AR+L+D++S + T M+S
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 293 GYAKHGMVKDARFIFDQ--IVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQ 350
GY G + AR +F++ + +D V ++AMI+G++ ++ A+ LF +M+ PD
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 351 ITMLSAISACANVG-ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGN----LIRAK 405
T S ++ A V Q H A K+G G SV+NAL+ +Y+KC + L A+
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208
Query: 406 EVFENMPRKNVISWSSMINAFAMHGYAN-------------------------------- 433
+VF+ + K+ SW++M+ + +GY +
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268
Query: 434 SAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCM 493
A+ + RM IE + + V+ AC+ AGL++ G+++ + ++ + ++ +
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SL 326
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILE 547
V LY + +A + E MP A +++ W +L+S G + + K++ E
Sbjct: 327 VSLYYKCGKFDEARAIFEKMP-AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 155/336 (46%), Gaps = 23/336 (6%)
Query: 125 KAVSKASALYLGLEIHGLASK---LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR 181
+A + A L LG ++H + FH D L+++Y C + +AR +F+KM +
Sbjct: 294 RACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAK 349
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D V+WN ++ GY SG+ + +++EMK + + ++S +G G +
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI----LSWMIMISGLAENGFGEEGLKLF 405
Query: 242 EFIMDNGL-----ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAK 296
+ G A S ++S V + C +L L A+++ YAK
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAV-LGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAK 464
Query: 297 HGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSA 356
G+V++AR +F + D V W+A+I+ + EA+ ++ EM + I PD+IT+L+
Sbjct: 465 CGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTV 524
Query: 357 ISACANVGALAQAR-WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKN 415
++AC++ G + Q R + + LID+ + G A+ V E++P K
Sbjct: 525 LTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKP 584
Query: 416 VIS-WSSMINAFAMHGYAN----SAMNLFHRMKEED 446
W ++++ +HG +A LF + E D
Sbjct: 585 TAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 92 LSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSD 151
L+ + + L L+ ++R G K+ + A G + H K+GF S
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS 451
Query: 152 PFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKT 211
LI MY+ C + +AR VF M D+V+WN +I Q G+ + + +YEEM
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Query: 212 SDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMD-NGLALSAHLQSALVNMYVNCGAMD 270
+PD + L TVL+AC H+G + G+ + + + A + L+++ G
Sbjct: 512 KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571
Query: 271 LARELYDKLSSKHLV-VSTAMLSGYAKHG 298
A + + L K + A+LSG HG
Sbjct: 572 DAESVIESLPFKPTAEIWEALLSGCRVHG 600
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/462 (41%), Positives = 277/462 (59%), Gaps = 33/462 (7%)
Query: 232 GNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAML 291
++ G+ IH ++ +G ++Q++L+++Y NCG
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGD----------------------- 38
Query: 292 SGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQI 351
V A +FD++ EKDLV W+++I+G+AE+ +P+EAL L+ EM + I PD
Sbjct: 39 --------VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 90
Query: 352 TMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM 411
T++S +SACA +GAL + +H Y K G R+L +N L+D+YA+CG + AK +F+ M
Sbjct: 91 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
Query: 412 PRKNVISWSSMINAFAMHGYANSAMNLFHRMKE-EDIEPNGVIFIGVLYACSHAGLVEEG 470
KN +SW+S+I A++G+ A+ LF M+ E + P + F+G+LYACSH G+V+EG
Sbjct: 151 VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 210
Query: 471 QKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQ 530
+ F M E+ I PR EH+GCMVDL RA ++KA E I+SMP PNV+IW +L+ AC
Sbjct: 211 FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 270
Query: 531 VHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKAS 590
VHG+ +L EFA QIL+LEP+H G V+LSN+YA E+RW+DV IR+ M G+ K
Sbjct: 271 VHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGH 330
Query: 591 SRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXX 650
S VE+ N VH F+M D+ H QS IY KL+E+ L+ Y P S
Sbjct: 331 SLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENA 390
Query: 651 XXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
+HSEK+A+ + LIS + S I +VKNLR+C DCH +KL
Sbjct: 391 VVYHSEKIAIAFMLISTPER-SPITVVKNLRVCADCHLAIKL 431
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 165/319 (51%), Gaps = 36/319 (11%)
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
LG IH + + GF S ++Q L+ +Y+ C + A VFDKM +D V WN +I+G+
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
++G ++ L LY EM + KPDG + ++LSAC G L+ GK +H +++ GL + H
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
+ L+++Y CG ++ A+ L+D++ K+ V T+++ G A +G K
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGK------------- 172
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQ-LRNIVPDQITMLSAISACANVGALAQA-RWI 372
EA++LF M+ ++P +IT + + AC++ G + + +
Sbjct: 173 ------------------EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYF 214
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMHGY 431
++ + ++D+ A+ G + +A E ++MP + NV+ W +++ A +HG
Sbjct: 215 RRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG- 273
Query: 432 ANSAMNLFHRMKEEDIEPN 450
+S + F R++ +EPN
Sbjct: 274 -DSDLAEFARIQILQLEPN 291
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++P D N ++ + + P+ L LY ++ G A +K A
Sbjct: 45 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 104
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L LG +H K+G + L+ +Y+ C R+ +A+ +FD+M +++V+W +I G
Sbjct: 105 LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 164
Query: 193 YCQSGNYDQVLKLYEEMKTSDT-KPDGVILCTVLSACGHSGNLSYG 237
+G + ++L++ M++++ P + +L AC H G + G
Sbjct: 165 LAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 210
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/623 (33%), Positives = 326/623 (52%), Gaps = 37/623 (5%)
Query: 77 IPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLG 136
+ D N ++ L+RS L + +R++ KA S ++ G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 137 LEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQS 196
+ H A G+ SD F+ + LI MYS C ++ DAR VFD++ R+ V+W MI GY +
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 197 GNYDQVLKLYEEMKTSDTKPDGVI------LCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
GN + L++++ + D + L +V+SAC ++IH F++ G
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+ + L++ Y G G V AR IFDQI
Sbjct: 216 RGVSVGNTLLDAYAKGG-----------------------------EGGVAVARKIFDQI 246
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVP-DQITMLSAISACANVGALAQA 369
V+KD V +++++S YA+S EA ++F + +V + IT+ + + A ++ GAL
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
+ IH + G + V ++IDMY KCG + A++ F+ M KNV SW++MI + MH
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
G+A A+ LF M + + PN + F+ VL ACSHAGL EG + F++M G+ P EH
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH 426
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
YGCMVDL RA L+KA +LI+ M P+ IIW SL++AC++H VEL E + ++ EL+
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
Query: 550 PDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYH 609
+ G ++LS+IYA RW DV +R M N+G+ K S +E+N EVHVF++ D H
Sbjct: 487 SSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEH 546
Query: 610 KQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRR 669
Q +IY+ L E+ +L Y +TS HSEKLA+ +G+++
Sbjct: 547 PQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNT-V 605
Query: 670 KESCIRIVKNLRICEDCHSFMKL 692
S + +VKNLR+C DCH+ +KL
Sbjct: 606 PGSTVNVVKNLRVCSDCHNVIKL 628
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 155/317 (48%), Gaps = 43/317 (13%)
Query: 280 SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK-DLVCWSAMISGYAESDQPQEALKLF 338
S K L S + L +H ++ +F++ V+K D+ W+++I+ A S EAL F
Sbjct: 5 SKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAF 64
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC 398
+ M+ ++ P + + AI AC+++ + + H A G+ + V++ALI MY+ C
Sbjct: 65 SSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTC 124
Query: 399 GNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIF---- 454
G L A++VF+ +P++N++SW+SMI + ++G A A++LF + ++ + + +F
Sbjct: 125 GKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSM 184
Query: 455 --IGVLYACSHA---GLVE------------EGQKLFSSMIN------EHGIAPRHEHYG 491
+ V+ ACS GL E G + +++++ E G+A + +
Sbjct: 185 GLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFD 244
Query: 492 CMVD-----------LYCRANLLRKAME----LIESMPFAPNVIIWGSLMSACQVHGEVE 536
+VD +Y ++ + +A E L+++ N I +++ A G +
Sbjct: 245 QIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALR 304
Query: 537 LGEFAAKQILELEPDHD 553
+G+ Q++ + + D
Sbjct: 305 IGKCIHDQVIRMGLEDD 321
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKL-RRVGXXXXXXXXXXXXKAVSKAS 131
+F QI + D N ++ + ++S ++++L + AVS +
Sbjct: 242 IFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG 301
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
AL +G IH ++G D + T +I MY C R+ AR FD+M +++ +W MI
Sbjct: 302 ALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIA 361
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSG 232
GY G+ + L+L+ M S +P+ + +VL+AC H+G
Sbjct: 362 GYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/691 (29%), Positives = 356/691 (51%), Gaps = 72/691 (10%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++ F N L+ L++S ++ L++K+ G K+ S +
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
++ G ++HG K GF + L+A Y +R+ AR VFD+M+ RD ++WN +I+G
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y +G ++ L ++ +M S + D + +V + C S +S G+A+H + +
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ L++MY CG +D A+ ++ ++S + +V T+M++GYA+ G+ +A +F+++ E
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 313 K---------------------------------------DLVCWSAMISGYAESDQPQE 333
+ D+ +A++ YA+ QE
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 334 ALKLFNEMQLRNIV--------------------------------PDQITMLSAISACA 361
A +F+EM++++I+ PD+ T+ + ACA
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 362 NVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSS 421
++ A + R IH Y +NG+ V N+L+DMYAKCG L+ A +F+++ K+++SW+
Sbjct: 511 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 570
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
MI + MHG+ A+ LF++M++ IE + + F+ +LYACSH+GLV+EG + F+ M +E
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 482 GIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFA 541
I P EHY C+VD+ R L KA IE+MP P+ IWG+L+ C++H +V+L E
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 542 AKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHV 601
A+++ ELEP++ G V+++NIYA+ +W V +R+ + +G+ K S +EI V++
Sbjct: 691 AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNI 750
Query: 602 FMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALC 661
F+ D + ++ I L +V + + Y+P T HSEKLA+
Sbjct: 751 FVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMA 810
Query: 662 YGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
G+IS + IR+ KNLR+C DCH K
Sbjct: 811 LGIISSGHGK-IIRVTKNLRVCGDCHEMAKF 840
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 198/401 (49%), Gaps = 33/401 (8%)
Query: 128 SKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWN 187
+ + +L G E+ GF D + + L MY+ C + +A VFD++ A+ WN
Sbjct: 105 ADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWN 164
Query: 188 IMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN 247
I+++ +SG++ + L+++M +S + D V + ++ G+ +H FI+ +
Sbjct: 165 ILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS 224
Query: 248 GLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIF 307
G + ++LV Y+ K+ V AR +F
Sbjct: 225 GFGERNSVGNSLVAFYL-------------------------------KNQRVDSARKVF 253
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
D++ E+D++ W+++I+GY + ++ L +F +M + I D T++S + CA+ ++
Sbjct: 254 DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLIS 313
Query: 368 QARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFA 427
R +H+ K F R N L+DMY+KCG+L AK VF M ++V+S++SMI +A
Sbjct: 314 LGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA 373
Query: 428 MHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
G A A+ LF M+EE I P+ VL C+ L++EG+++ I E+ +
Sbjct: 374 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV-HEWIKENDLGFDI 432
Query: 488 EHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
++D+Y + +++A EL+ S ++I W +++
Sbjct: 433 FVSNALMDMYAKCGSMQEA-ELVFSEMRVKDIISWNTIIGG 472
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 325 YAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS 384
+ ES + A+KL +I P T+ S + CA+ +L + + + NGF
Sbjct: 71 FCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVID 128
Query: 385 LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE 444
++ + L MY CG+L A VF+ + + + W+ ++N A G + ++ LF +M
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 445 EDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLR 504
+E + F V + S V G++L I + G R+ +V Y + +
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVHGGEQL-HGFILKSGFGERNSVGNSLVAFYLKNQRVD 247
Query: 505 KAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVV 558
A ++ + M +VI W S+++ +G E G Q+L + D A +V
Sbjct: 248 SARKVFDEMT-ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/559 (35%), Positives = 310/559 (55%), Gaps = 5/559 (0%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAM---YSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
+IH K G D + T ++ ++ + A++VFD D WN+MI G+
Sbjct: 32 QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS 91
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
S ++ L LY+ M S + ++L AC + IH I G +
Sbjct: 92 CSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVY 151
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
++L+N Y G LA L+D++ V +++ GY K G + A +F ++ EK+
Sbjct: 152 AVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKN 211
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
+ W+ MISGY ++D +EAL+LF+EMQ ++ PD +++ +A+SACA +GAL Q +WIH+
Sbjct: 212 AISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHS 271
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
Y +K + LIDMYAKCG + A EVF+N+ +K+V +W+++I+ +A HG+
Sbjct: 272 YLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGRE 331
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV 494
A++ F M++ I+PN + F VL ACS+ GLVEEG+ +F SM ++ + P EHYGC+V
Sbjct: 332 AISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIV 391
Query: 495 DLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDG 554
DL RA LL +A I+ MP PN +IWG+L+ AC++H +ELGE + ++ ++P H G
Sbjct: 392 DLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGG 451
Query: 555 ALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSRE 614
V +NI+A +++W+ R+ M +G++K S + + H F+ DR H + +
Sbjct: 452 RYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEK 511
Query: 615 IYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXX-WHSEKLALCYGLISKRRKESC 673
I K + +L+ Y P HSEKLA+ YGLI K + +
Sbjct: 512 IQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLI-KTKPGTI 570
Query: 674 IRIVKNLRICEDCHSFMKL 692
IRI+KNLR+C+DCH KL
Sbjct: 571 IRIMKNLRVCKDCHKVTKL 589
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 181/432 (41%), Gaps = 65/432 (15%)
Query: 32 QLKQIHAQILRSN-PSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLR 90
+LKQIHA++L++ + VF PDT N ++R
Sbjct: 29 ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88
Query: 91 LLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHS 150
S S P+ +L LYQ++ KA S SA +IH +KLG+ +
Sbjct: 89 GFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYD---------- 200
D + LI Y+ A L+FD++ D V+WN +I GY ++G D
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 201 ---------------------QVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKA 239
+ L+L+ EM+ SD +PD V L LSAC G L GK
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 240 IHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGM 299
IH ++ + + + L L++MY CG M+ A E++ + K + TA++SGYA HG
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG- 327
Query: 300 VKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISA 359
+EA+ F EMQ I P+ IT + ++A
Sbjct: 328 ------------------------------HGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 360 CANVGALAQARWIHTYADKN-GFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-NVI 417
C+ G + + + I +++ ++ ++D+ + G L AK + MP K N +
Sbjct: 358 CSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV 417
Query: 418 SWSSMINAFAMH 429
W +++ A +H
Sbjct: 418 IWGALLKACRIH 429
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/602 (34%), Positives = 315/602 (52%), Gaps = 81/602 (13%)
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
LG ++H A + F+ L+ MY+ C + +A VF MS +D V+WN M+ GY
Sbjct: 247 LGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYS 306
Query: 195 QSGNYDQVLKLYEEMK-----------------------------------TSDTKPDGV 219
Q G ++ ++L+E+M+ +S KP+ V
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 220 ILCTVLSACGHSGNLSYGKAIHEF-------IMDNGLALSAHLQSALVNMYVNCGAMDLA 272
L +VLS C G L +GK IH + + NG + + L++MY C +D A
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 273 RELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQ 332
R ++D LS K E+D+V W+ MI GY++
Sbjct: 427 RAMFDSLSPK-----------------------------ERDVVTWTVMIGGYSQHGDAN 457
Query: 333 EALKLFNEM-----QLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGR-SLS 386
+AL+L +EM Q R P+ T+ A+ ACA++ AL + IH YA +N L
Sbjct: 458 KALELLSEMFEEDCQTR---PNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 387 VNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEED 446
V+N LIDMYAKCG++ A+ VF+NM KN ++W+S++ + MHGY A+ +F M+
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Query: 447 IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKA 506
+ +GV + VLYACSH+G++++G + F+ M G++P EHY C+VDL RA L A
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA 634
Query: 507 MELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKE 566
+ LIE MP P ++W + +S C++HG+VELGE+AA++I EL +HDG+ +LSN+YA
Sbjct: 635 LRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 694
Query: 567 RRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSEL 626
RW DV IR M +KG+ K S VE F + D+ H ++EIY+ L + + +
Sbjct: 695 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRI 754
Query: 627 KLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDC 686
K + Y P T HSEKLAL YG+++ + + IRI KNLR+C DC
Sbjct: 755 KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAA-IRITKNLRVCGDC 813
Query: 687 HS 688
H+
Sbjct: 814 HT 815
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 257/493 (52%), Gaps = 21/493 (4%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N L+R + L+L+ + + KA + S++ G H L+
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL 205
GF S+ F+ L+AMYS CR + DAR VFD+MS D V+WN +I+ Y + G L++
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 206 YEEMKTS-DTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYV 264
+ M +PD + L VL C G S GK +H F + + + + + + LV+MY
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 265 NCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK----DLVCWSA 320
CG MD A ++ +S K +V AM++GY++ G +DA +F+++ E+ D+V WSA
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 321 MISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYA---- 376
ISGYA+ EAL + +M I P+++T++S +S CA+VGAL + IH YA
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 377 ---DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK--NVISWSSMINAFAMHGY 431
KNG G V N LIDMYAKC + A+ +F+++ K +V++W+ MI ++ HG
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 432 ANSAMNLFHRMKEEDIE--PNGVIFIGVLYACSHAGLVEEGQKLFS-SMINEHGIAPRHE 488
AN A+ L M EED + PN L AC+ + G+++ + ++ N+ P
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 489 HYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVH--GEVELGEFAAKQIL 546
C++D+Y + + A + ++M A N + W SLM+ +H GE LG F + +
Sbjct: 516 S-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI 573
Query: 547 ELEPDHDGALVVL 559
+ D LVVL
Sbjct: 574 GFKLDGVTLLVVL 586
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 175/393 (44%), Gaps = 76/393 (19%)
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
WN +I Y +G ++ L L+ M + PD V ACG ++ G++ H +
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
G + + +ALV MY C ++ DAR
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSL-------------------------------SDARK 183
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLR-NIVPDQITMLSAISACANVG 364
+FD++ D+V W+++I YA+ +P+ AL++F+ M PD IT+++ + CA++G
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
+ + +H +A + +++ V N L+DMYAKCG + A VF NM K+V+SW++M+
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 425 AFAMHGYANSAMNLFHRMKEED-----------------------------------IEP 449
++ G A+ LF +M+EE I+P
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 450 NGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG-------CMVDLYCRANL 502
N V I VL C+ G + G+++ I ++ I R +G ++D+Y +
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAI-KYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 503 LRKAMELIESM-PFAPNVIIWGSLMSACQVHGE 534
+ A + +S+ P +V+ W ++ HG+
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/557 (36%), Positives = 314/557 (56%), Gaps = 38/557 (6%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMS-HRDAVTWNIMIDGYCQS 196
++H K GF D I+T L+ YS C ++DA +F ++ + V+W MI G+ Q+
Sbjct: 316 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 375
Query: 197 GNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQ 256
++ + L+ EMK +P+ +L+A I + H Q
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL-------------PVISPS----EVHAQ 418
Query: 257 SALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV 316
N Y++ S+ V TA+L Y K G V++A +F I +KD+V
Sbjct: 419 VVKTN--------------YERSST----VGTALLDAYVKLGKVEEAAKVFSGIDDKDIV 460
Query: 317 CWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA-LAQARWIHTY 375
WSAM++GYA++ + + A+K+F E+ I P++ T S ++ CA A + Q + H +
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 520
Query: 376 ADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSA 435
A K+ SL V++AL+ MYAK GN+ A+EVF+ K+++SW+SMI+ +A HG A A
Sbjct: 521 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 580
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
+++F MK+ ++ +GV FIGV AC+HAGLVEEG+K F M+ + IAP EH CMVD
Sbjct: 581 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 640
Query: 496 LYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGA 555
LY RA L KAM++IE+MP IW ++++AC+VH + ELG AA++I+ ++P+ A
Sbjct: 641 LYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAA 700
Query: 556 LVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREI 615
V+LSN+YA+ W + +R+ M + + KE S +E+ N+ + F+ DR H +I
Sbjct: 701 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQI 760
Query: 616 YKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIR 675
Y KLE++ + LK + Y P TS HSE+LA+ +GLI+ K S +
Sbjct: 761 YMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIAT-PKGSPLL 819
Query: 676 IVKNLRICEDCHSFMKL 692
I+KNLR+C DCH +KL
Sbjct: 820 IIKNLRVCGDCHLVIKL 836
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/539 (24%), Positives = 227/539 (42%), Gaps = 88/539 (16%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F + P D LL SR Q L+ + R+G K +
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
G ++H K GF D + T L+ Y D R VFD+M R+ VTW +I G
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y ++ D+VL L+ M+ T+P+ L G G +H ++ NGL +
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGM------------- 299
+ ++L+N+Y+ CG + AR L+DK K +V +M+SGYA +G+
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 300 -------------------VKDAR-------------FIFDQIVE--------------- 312
+K+ R F+FDQ +
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
Query: 313 -----KDLVC------WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACA 361
K++ C W+AMISG+ ++D +EA+ LF+EM+ + + P++ T ++A
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 362 NVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSS 421
+ +H K + RS +V AL+D Y K G + A +VF + K++++WS+
Sbjct: 409 VISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
M+ +A G +A+ +F + + I+PN F +L C+ K F H
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF------H 518
Query: 482 GIA--PRHEHYGC----MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE 534
G A R + C ++ +Y + + A E+ + +++ W S++S HG+
Sbjct: 519 GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQ 576
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 174/362 (48%), Gaps = 32/362 (8%)
Query: 167 RIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLS 226
R+ +A +FDK RD ++ ++ G+ + G + +L+ + + D C++ S
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMD----CSIFS 97
Query: 227 ACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVV 286
+ L +SA L L ++C + D +S V
Sbjct: 98 SV--------------------LKVSATLCDELFGRQLHCQCIKFG--FLDDVS-----V 130
Query: 287 STAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI 346
T+++ Y K KD R +FD++ E+++V W+ +ISGYA + E L LF MQ
Sbjct: 131 GTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGT 190
Query: 347 VPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKE 406
P+ T +A+ A G + +HT KNG +++ V+N+LI++Y KCGN+ +A+
Sbjct: 191 QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARI 250
Query: 407 VFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGL 466
+F+ K+V++W+SMI+ +A +G A+ +F+ M+ + + F V+ C++
Sbjct: 251 LFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKE 310
Query: 467 VEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLM 526
+ ++L S++ + ++ MV Y + + A+ L + + NV+ W +++
Sbjct: 311 LRFTEQLHCSVVKYGFLFDQNIRTALMV-AYSKCTAMLDALRLFKEIGCVGNVVSWTAMI 369
Query: 527 SA 528
S
Sbjct: 370 SG 371
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 113/232 (48%), Gaps = 2/232 (0%)
Query: 302 DARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACA 361
+A +FD+ +D + +++ G++ + QEA +LF + + D S + A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 362 NVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSS 421
+ R +H K GF +SV +L+D Y K N ++VF+ M +NV++W++
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
+I+ +A + + + LF RM+ E +PN F L + G+ G ++ + ++ ++
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV-KN 223
Query: 482 GIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
G+ +++LY + +RKA L + +V+ W S++S +G
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTE-VKSVVTWNSMISGYAANG 274
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 6/280 (2%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VFS I + D + +L +++ + + ++ +L + G + +A
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Query: 133 -LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
+ G + HG A K S + + L+ MY+ I A VF + +D V+WN MI
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM-DNGLA 250
GY Q G + L +++EMK K DGV V +AC H+G + G+ + ++ D +A
Sbjct: 570 GYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIA 629
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKL-SSKHLVVSTAMLSGYAKHGMVKDARFIFDQ 309
+ S +V++Y G ++ A ++ + + + + +L+ H + R ++
Sbjct: 630 PTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEK 689
Query: 310 IVE---KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI 346
I+ +D + + + YAES QE K+ M RN+
Sbjct: 690 IIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNV 729
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/621 (32%), Positives = 327/621 (52%), Gaps = 36/621 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++P D N ++ +S + L L LR + A ++A
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGD 262
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
G+ IH + K G S+ F+ LI +Y+ R+ D + VFD+M RD ++WN +I
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y + + + L++EM+ S +PD + L ++ S G++ +++ F + G L
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL- 381
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ + + A++ YAK G+V AR +F+ +
Sbjct: 382 -----------------------------EDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRN-IVPDQITMLSAISACANVGALAQARW 371
D++ W+ +ISGYA++ EA++++N M+ I +Q T +S + AC+ GAL Q
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
+H KNG + V +L DMY KCG L A +F +PR N + W+++I HG+
Sbjct: 473 LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGH 532
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
A+ LF M +E ++P+ + F+ +L ACSH+GLV+EGQ F M ++GI P +HYG
Sbjct: 533 GEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYG 592
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPD 551
CMVD+Y RA L A++ I+SM P+ IWG+L+SAC+VHG V+LG+ A++ + E+EP+
Sbjct: 593 CMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPE 652
Query: 552 HDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQ 611
H G V+LSN+YA +W V IR KG+ K S +E++N+V VF ++ H
Sbjct: 653 HVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPM 712
Query: 612 SREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKE 671
E+Y++L + ++LK++ Y P HSE+LA+ + LI+ K
Sbjct: 713 YEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKT 772
Query: 672 SCIRIVKNLRICEDCHSFMKL 692
+ IRI KNLR+C DCHS K
Sbjct: 773 T-IRIFKNLRVCGDCHSVTKF 792
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 232/429 (54%), Gaps = 41/429 (9%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G +IH LA K GF D ++ LI +YS + + +AR++FD+M RD +WN MI GYCQ
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
SGN + L L ++ D+ V + ++LSAC +G+ + G IH + + +GL +
Sbjct: 229 SGNAKEALTLSNGLRAMDS----VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
+ L+++Y A+ G ++D + +FD++ +DL
Sbjct: 285 SNKLIDLY-------------------------------AEFGRLRDCQKVFDRMYVRDL 313
Query: 316 VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTY 375
+ W+++I Y ++QP A+ LF EM+L I PD +T++S S + +G + R + +
Sbjct: 314 ISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGF 373
Query: 376 ADKNG-FGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
+ G F +++ NA++ MYAK G + A+ VF +P +VISW+++I+ +A +G+A+
Sbjct: 374 TLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASE 433
Query: 435 AMNLFHRMKEE-DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCM 493
A+ +++ M+EE +I N ++ VL ACS AG + +G KL ++ ++G+ +
Sbjct: 434 AIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL-KNGLYLDVFVVTSL 492
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILE--LEPD 551
D+Y + L A+ L +P N + W +L++ HG E K++L+ ++PD
Sbjct: 493 ADMYGKCGRLEDALSLFYQIPRV-NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPD 551
Query: 552 HDGALVVLS 560
H + +LS
Sbjct: 552 HITFVTLLS 560
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 189/403 (46%), Gaps = 51/403 (12%)
Query: 154 IQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYE-EMKTS 212
I L+ +Y + AR FD + +RD WN+MI GY ++GN +V++ + M +S
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 213 DTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLA 272
PD +VL AC + G IH + G ++ ++L+++Y
Sbjct: 148 GLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLY--------- 195
Query: 273 RELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQ 332
+++ V +AR +FD++ +D+ W+AMISGY +S +
Sbjct: 196 ----------------------SRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 333 EALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALI 392
EAL L N ++ D +T++S +SAC G + IH+Y+ K+G L V+N LI
Sbjct: 234 EALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 393 DMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGV 452
D+YA+ G L ++VF+ M +++ISW+S+I A+ ++ A++LF M+ I+P+ +
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349
Query: 453 IFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIES 512
I + S G + + + + + +V +Y + L+ A +
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 513 MPFAPNVIIWGSLMSACQVHGEV-----------ELGEFAAKQ 544
+P +VI W +++S +G E GE AA Q
Sbjct: 410 LP-NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQ 451
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/545 (34%), Positives = 291/545 (53%), Gaps = 33/545 (6%)
Query: 148 FHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYE 207
F D + L+ MY+ C + +AR VF+KM RD VTW +I GY Q L +
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFN 150
Query: 208 EMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCG 267
+M P+ L +V+ A G +H F + G + H+ SAL+++Y
Sbjct: 151 QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYT--- 207
Query: 268 AMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAE 327
++G++ DA+ +FD + ++ V W+A+I+G+A
Sbjct: 208 ----------------------------RYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 328 SDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSV 387
++AL+LF M P + S AC++ G L Q +W+H Y K+G
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 388 NNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDI 447
N L+DMYAK G++ A+++F+ + +++V+SW+S++ A+A HG+ A+ F M+ I
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 448 EPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAM 507
PN + F+ VL ACSH+GL++EG + ++ + GI P HY +VDL RA L +A+
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 508 ELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKER 567
IE MP P IW +L++AC++H ELG +AA+ + EL+PD G V+L NIYA
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGG 478
Query: 568 RWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELK 627
RWND +R+ M G+ KE A S VEI N +H+F+ D H Q EI +K EEV++++K
Sbjct: 479 RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538
Query: 628 LVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCH 687
+ Y P TS +HSEK+AL + L++ S I I KN+R+C DCH
Sbjct: 539 ELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNT-PPGSTIHIKKNIRVCGDCH 597
Query: 688 SFMKL 692
+ +KL
Sbjct: 598 TAIKL 602
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 169/358 (47%), Gaps = 32/358 (8%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++P D L+ S+ P + L + ++ R G KA +
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
G ++HG K GF S+ + + L+ +Y+ + DA+LVFD + R+ V+WN +I G
Sbjct: 177 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 236
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
+ + ++ L+L++ M +P ++ AC +G L GK +H +++ +G L
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
A + L++MY G++ AR+++D+L+ + +V ++L+ YA+HG K+A
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA--------- 347
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
V W F EM+ I P++I+ LS ++AC++ G L +
Sbjct: 348 ---VWW-------------------FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 385
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMINAFAMH 429
+ K+G ++D+ + G+L RA E MP + + W +++NA MH
Sbjct: 386 YELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 150/326 (46%), Gaps = 33/326 (10%)
Query: 208 EMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCG 267
+++ S D T+L C L G+ +H I+ + + + L+NMY CG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 268 AMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAE 327
+++ AR++++K+ + V T ++SGY++H
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQH------------------------------ 139
Query: 328 SDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSV 387
D+P +AL FN+M P++ T+ S I A A +H + K GF ++ V
Sbjct: 140 -DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 388 NNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDI 447
+AL+D+Y + G + A+ VF+ + +N +SW+++I A A+ LF M +
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 448 EPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAM 507
P+ + + ACS G +E+G+ + + MI G ++D+Y ++ + A
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS-GEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 508 ELIESMPFAPNVIIWGSLMSACQVHG 533
++ + + +V+ W SL++A HG
Sbjct: 318 KIFDRLA-KRDVVSWNSLLTAYAQHG 342
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 126/285 (44%), Gaps = 44/285 (15%)
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC 398
N+++ I D+ + + C L Q R +H + ++ F + + N L++MYAKC
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 399 GNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVL 458
G+L A++VFE MP+++ ++W+++I+ ++ H A+ F++M PN V+
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 459 YA--------CSHA---------------------------GLVEEGQKLFSSMINEHGI 483
A C H GL+++ Q +F ++ + + +
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSACQVHGEVELGEF 540
+ + ++ + R + KA+EL + M F P+ + SL AC G +E G++
Sbjct: 229 S-----WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283
Query: 541 A-AKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGI 584
A I E A L ++YAK +D I +A + +
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/568 (35%), Positives = 310/568 (54%), Gaps = 38/568 (6%)
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMI 190
S+L L +H G DPF+ T LI MYS + AR VFDK R WN +
Sbjct: 91 SSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALF 150
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHS----GNLSYGKAIHEFIMD 246
+G+ ++VL LY +M + D VL AC S +L GK IH
Sbjct: 151 RALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIH----- 205
Query: 247 NGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFI 306
AHL R Y S H+ + T ++ YA+ G V A ++
Sbjct: 206 ------AHL----------------TRRGY----SSHVYIMTTLVDMYARFGCVDYASYV 239
Query: 307 FDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEM--QLRNIVPDQITMLSAISACANVG 364
F + +++V WSAMI+ YA++ + EAL+ F EM + ++ P+ +TM+S + ACA++
Sbjct: 240 FGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLA 299
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
AL Q + IH Y + G L V +AL+ MY +CG L + VF+ M ++V+SW+S+I+
Sbjct: 300 ALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLIS 359
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
++ +HGY A+ +F M P V F+ VL ACSH GLVEEG++LF +M +HGI
Sbjct: 360 SYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIK 419
Query: 485 PRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQ 544
P+ EHY CMVDL RAN L +A ++++ M P +WGSL+ +C++HG VEL E A+++
Sbjct: 420 PQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRR 479
Query: 545 ILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMM 604
+ LEP + G V+L++IYA+ + W++V +++ + ++G+ K +E+ +++ F+
Sbjct: 480 LFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVS 539
Query: 605 ADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGL 664
D ++ +I+ L ++ ++K Y P T G HSEKLAL +GL
Sbjct: 540 VDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGL 599
Query: 665 ISKRRKESCIRIVKNLRICEDCHSFMKL 692
I+ + E IRI KNLR+CEDCH F K
Sbjct: 600 INTSKGEP-IRITKNLRLCEDCHLFTKF 626
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 1/159 (0%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
+A + +AL G IHG + G S + + L+ MY C ++ + VFD+M RD V
Sbjct: 293 QACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV 352
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
+WN +I Y G + ++++EEM + P V +VL AC H G + GK + E +
Sbjct: 353 SWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412
Query: 245 M-DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK 282
D+G+ + +V++ +D A ++ + ++
Sbjct: 413 WRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 7/186 (3%)
Query: 348 PDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEV 407
P Q T I C + +L+ A +H + NG + + LI MY+ G++ A++V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 408 FENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGL- 466
F+ ++ + W+++ A + G+ + L+ +M +E + + VL AC +
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 467 ---VEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWG 523
+ +G+++ + + G + +VD+Y R + A + MP NV+ W
Sbjct: 195 VNHLMKGKEIHAHL-TRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSW- 251
Query: 524 SLMSAC 529
S M AC
Sbjct: 252 SAMIAC 257
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/511 (35%), Positives = 300/511 (58%), Gaps = 4/511 (0%)
Query: 125 KAVSKASALYLG---LEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR 181
KA+S +LG ++HG + GF SD F+ G+I Y+ C I AR VFD+MS R
Sbjct: 137 KALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSER 196
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAI 240
D V+WN MI GY QSG+++ K+Y+ M SD KP+GV + +V ACG S +L +G +
Sbjct: 197 DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEV 256
Query: 241 HEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMV 300
H+ +++N + + L +A++ Y CG++D AR L+D++S K V A++SGY HG+V
Sbjct: 257 HKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLV 316
Query: 301 KDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISAC 360
K+A +F ++ L W+AMISG +++ +E + F EM P+ +T+ S + +
Sbjct: 317 KEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSL 376
Query: 361 ANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWS 420
L + IH +A +NG ++ V ++ID YAK G L+ A+ VF+N +++I+W+
Sbjct: 377 TYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWT 436
Query: 421 SMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINE 480
++I A+A+HG ++SA +LF +M+ +P+ V VL A +H+G + Q +F SM+ +
Sbjct: 437 AIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTK 496
Query: 481 HGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEF 540
+ I P EHY CMV + RA L AME I MP P +WG+L++ V G++E+ F
Sbjct: 497 YDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARF 556
Query: 541 AAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVH 600
A ++ E+EP++ G +++N+Y + RW + ++R M G+ K +S +E +
Sbjct: 557 ACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLR 616
Query: 601 VFMMADRYHKQSREIYKKLEEVVSELKLVSY 631
F+ D ++S+E+Y+ +E +V + Y
Sbjct: 617 SFIAKDSSCERSKEMYEIIEGLVESMSDKEY 647
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 198/466 (42%), Gaps = 74/466 (15%)
Query: 137 LEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQS 196
L++H D F+ + LI+ Y+ R A VFD+++ R+A ++N ++ Y
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 197 GNYDQVLKLY-----EEMKTSD-TKPDGVILCTVLSACGHSGNL---SYGKAIHEFIMDN 247
Y L+ +SD +PD + + VL A + S + +H F++
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG 161
Query: 248 GLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIF 307
G + + ++ Y C ++ AR+++D++S + +V +M+SGY++ G +D + ++
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
+ L C + P+ +T++S AC L
Sbjct: 222 KAM----LAC--------------------------SDFKPNGVTVISVFQACGQSSDLI 251
Query: 368 QARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFA 427
+H +N LS+ NA+I YAKCG+L A+ +F+ M K+ +++ ++I+ +
Sbjct: 252 FGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYM 311
Query: 428 MHGYANSAMNLFHRMK--------------------EEDI-----------EPNGVIFIG 456
HG AM LF M+ EE I PN V
Sbjct: 312 AHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSS 371
Query: 457 VLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFA 516
+L + +++ ++ G+++ + I +G ++D Y + L A + ++
Sbjct: 372 LLPSLTYSSNLKGGKEIHAFAI-RNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK-D 429
Query: 517 PNVIIWGSLMSACQVHGEVE--LGEFAAKQILELEPDHDGALVVLS 560
++I W ++++A VHG+ + F Q L +PD VLS
Sbjct: 430 RSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLS 475
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 131/275 (47%), Gaps = 5/275 (1%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+FS++ + N ++ L ++ + + ++++ R G +++ +S
Sbjct: 322 LFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSN 381
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L G EIH A + G ++ ++ T +I Y+ ++ A+ VFD R + W +I
Sbjct: 382 LKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITA 441
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN-GLAL 251
Y G+ D L+++M+ TKPD V L VLSA HSG+ + I + ++ +
Sbjct: 442 YAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEP 501
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLV-VSTAMLSGYAKHGMVKDARFIFDQI 310
+ +V++ G + A E K+ + V A+L+G + G ++ ARF D++
Sbjct: 502 GVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRL 561
Query: 311 VE---KDLVCWSAMISGYAESDQPQEALKLFNEMQ 342
E ++ ++ M + Y ++ + +EA + N+M+
Sbjct: 562 FEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMK 596
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/650 (31%), Positives = 327/650 (50%), Gaps = 63/650 (9%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKL-RRVGXXXXXXXXXXXXKAVSKAS 131
F ++P+ D N L+ S S + Y + R K S
Sbjct: 94 TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNG 153
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR---------- 181
+ LG +IHG KLGF S + + L+ MY+ I DA+ VF + R
Sbjct: 154 HVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMG 213
Query: 182 --------------------DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVIL 221
D+V+W MI G Q+G + ++ + EMK K D
Sbjct: 214 GLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 222 CTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSS 281
+VL ACG G ++ GK IH I+ ++ SAL++MY C + A
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA--------- 324
Query: 282 KHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEM 341
+ +FD++ +K++V W+AM+ GY ++ + +EA+K+F +M
Sbjct: 325 ----------------------KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Query: 342 QLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNL 401
Q I PD T+ AISACANV +L + H A +G ++V+N+L+ +Y KCG++
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 402 IRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYAC 461
+ +F M ++ +SW++M++A+A G A + LF +M + ++P+GV GV+ AC
Sbjct: 423 DDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482
Query: 462 SHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVII 521
S AGLVE+GQ+ F M +E+GI P HY CM+DL+ R+ L +AM I MPF P+ I
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIG 542
Query: 522 WGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMAN 581
W +L+SAC+ G +E+G++AA+ ++EL+P H +LS+IYA + +W+ V +R+ M
Sbjct: 543 WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMRE 602
Query: 582 KGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXX 641
K + KE S ++ ++H F D +IY KLEE+ +++ Y P TS
Sbjct: 603 KNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHD 662
Query: 642 XXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMK 691
+HSE+LA+ +GLI + IR+ KNLR+C DCH+ K
Sbjct: 663 VEEAVKVKMLNYHSERLAIAFGLIFVPSGQP-IRVGKNLRVCVDCHNATK 711
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 204/406 (50%), Gaps = 14/406 (3%)
Query: 153 FIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEM-KT 211
F L+ YS I + F+K+ RD VTWN++I+GY SG +K Y M +
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132
Query: 212 SDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDL 271
V L T+L +G++S GK IH ++ G + S L+ MY N G +
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 272 ARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQP 331
A++++ L ++ V+ +++ G GM++DA +F + +EKD V W+AMI G A++
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLA 251
Query: 332 QEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNAL 391
+EA++ F EM+++ + DQ S + AC +GA+ + + IH + F + V +AL
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 392 IDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNG 451
IDMY KC L AK VF+ M +KNV+SW++M+ + G A A+ +F M+ I+P+
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371
Query: 452 VIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY----GCMVDLYCRANLLRKAM 507
+ AC++ +EEG + I I HY +V LY + + +
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLI-----HYVTVSNSLVTLYGKCGDIDDST 426
Query: 508 ELIESMPFAPNVIIWGSLMSACQVHGE-VELGEFAAKQILE-LEPD 551
L M + + W +++SA G VE + K + L+PD
Sbjct: 427 RLFNEMN-VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPD 471
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 164/355 (46%), Gaps = 45/355 (12%)
Query: 236 YGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYA 295
Y K IH I+ L + +V+ Y + AR ++D++ +L +L Y+
Sbjct: 24 YVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYS 83
Query: 296 KHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPD--QITM 353
K G++ + F+++ ++D V W+ +I GY+ S A+K +N M +R+ + ++T+
Sbjct: 84 KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDFSANLTRVTL 142
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
++ + ++ G ++ + IH K GF L V + L+ MYA G + AK+VF +
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 414 KNV------------------------------ISWSSMINAFAMHGYANSAMNLFHRMK 443
+N +SW++MI A +G A A+ F MK
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 444 EEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG-CMVDLYCRANL 502
+ ++ + F VL AC G + EG+++ + +I + H + G ++D+YC+
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN--FQDHIYVGSALIDMYCKCKC 320
Query: 503 LRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE-----PDH 552
L A + + M NV+ W +++ +G+ E A K L+++ PDH
Sbjct: 321 LHYAKTVFDRMK-QKNVVSWTAMVVG---YGQTGRAEEAVKIFLDMQRSGIDPDH 371
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 361 bits (926), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 204/620 (32%), Positives = 326/620 (52%), Gaps = 34/620 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSK-AS 131
VF + D N ++ ++++ + L+ +L R G KA S
Sbjct: 372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPE 431
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
L L ++H A K+ SD F+ T LI YS R + +A ++F++ + D V WN M+
Sbjct: 432 GLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMA 490
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
GY QS + + LKL+ M + D L TV CG ++ GK +H + + +G L
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL 550
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ S +++MYV C G + A+F FD I
Sbjct: 551 DLWVSSGILDMYVKC-------------------------------GDMSAAQFAFDSIP 579
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
D V W+ MISG E+ + + A +F++M+L ++PD+ T+ + A + + AL Q R
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ 639
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
IH A K V +L+DMYAKCG++ A +F+ + N+ +W++M+ A HG
Sbjct: 640 IHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
+ LF +MK I+P+ V FIGVL ACSH+GLV E K SM ++GI P EHY
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYS 759
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPD 551
C+ D RA L+++A LIESM + ++ +L++AC+V G+ E G+ A ++LELEP
Sbjct: 760 CLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPL 819
Query: 552 HDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQ 611
A V+LSN+YA +W+++ L R M + K+ S +E+ N++H+F++ DR ++Q
Sbjct: 820 DSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQ 879
Query: 612 SREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKE 671
+ IY+K+++++ ++K Y P T +HSEKLA+ +GL+S
Sbjct: 880 TELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLST-PPS 938
Query: 672 SCIRIVKNLRICEDCHSFMK 691
+ IR++KNLR+C DCH+ MK
Sbjct: 939 TPIRVIKNLRVCGDCHNAMK 958
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 211/437 (48%), Gaps = 41/437 (9%)
Query: 129 KASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNI 188
K +L LG ++H +A KLG + LI MY R+ AR VFD MS RD ++WN
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386
Query: 189 MIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNG 248
+I G Q+G + + L+ ++ KPD + +VL A + G
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS--------------LPEG 432
Query: 249 LALS--AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFI 306
L+LS H+ + +N + VSTA++ Y+++ +K+A +
Sbjct: 433 LSLSKQVHVHAIKINNVSDS------------------FVSTALIDAYSRNRCMKEAEIL 474
Query: 307 FDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGAL 366
F++ DLV W+AM++GY +S + LKLF M + D T+ + C + A+
Sbjct: 475 FER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAI 533
Query: 367 AQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAF 426
Q + +H YA K+G+ L V++ ++DMY KCG++ A+ F+++P + ++W++MI+
Sbjct: 534 NQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGC 593
Query: 427 AMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPR 486
+G A ++F +M+ + P+ + A S +E+G+++ ++ + +
Sbjct: 594 IENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN--CTN 651
Query: 487 HEHYGC-MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFAAK 543
G +VD+Y + + A L + + N+ W +++ HGE + L F
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGKETLQLFKQM 710
Query: 544 QILELEPDHDGALVVLS 560
+ L ++PD + VLS
Sbjct: 711 KSLGIKPDKVTFIGVLS 727
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 200/448 (44%), Gaps = 57/448 (12%)
Query: 130 ASALYLGLEIHGLASKLGFHSDP--FIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWN 187
+S L LG H A L F +P F+ LI+MYS C + AR VFDKM RD V+WN
Sbjct: 52 SSDLMLGKCTH--ARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWN 109
Query: 188 IMIDGYCQSG-----NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE 242
++ Y QS N Q L+ ++ + L +L C HSG + ++ H
Sbjct: 110 SILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHG 169
Query: 243 FIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKD 302
+ GL + ALVN+Y+ G + + L++++ + +V+ ML Y + G ++
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEE 229
Query: 303 A-------------------RFIF-------------------DQIVEKDLVCWSAMISG 324
A R + D +++ + +S
Sbjct: 230 AIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSE 289
Query: 325 YAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS 384
Y S Q LK F +M ++ DQ+T + ++ V +LA + +H A K G
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 385 LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE 444
L+V+N+LI+MY K A+ VF+NM +++ISW+S+I A +G A+ LF ++
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 445 EDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH----YGCMVDLYCRA 500
++P+ VL A S + EG L S ++ H I + ++D Y R
Sbjct: 410 CGLKPDQYTMTSVLKAASS---LPEGLSL-SKQVHVHAIKINNVSDSFVSTALIDAYSRN 465
Query: 501 NLLRKAMELIESMPFAPNVIIWGSLMSA 528
+++A L E F +++ W ++M+
Sbjct: 466 RCMKEAEILFERHNF--DLVAWNAMMAG 491
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/533 (21%), Positives = 229/533 (42%), Gaps = 65/533 (12%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSP-----TPQNTLFLYQKLRRVGXXXXXXXXXXXXKAV 127
VF ++P+ D N +L ++S Q L++ LR+ K
Sbjct: 96 VFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC 155
Query: 128 SKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWN 187
+ ++ HG A K+G D F+ L+ +Y ++ + +++F++M +RD V WN
Sbjct: 156 LHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWN 215
Query: 188 IMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHS---------GNLSYGK 238
+M+ Y + G ++ + L +S P+ + L + G N +
Sbjct: 216 LMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDAS 275
Query: 239 AIHEFIMDNG------------------------------------LALSAHLQSALVNM 262
++ E I N LA + + S +
Sbjct: 276 SVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQ 335
Query: 263 YVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMI 322
V+C A+ L +L L VS ++++ Y K AR +FD + E+DL+ W+++I
Sbjct: 336 QVHCMALKLGLDLM-------LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVI 388
Query: 323 SGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVG-ALAQARWIHTYADK-NG 380
+G A++ EA+ LF ++ + PDQ TM S + A +++ L+ ++ +H +A K N
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN 448
Query: 381 FGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFH 440
S V+ ALID Y++ + A+ +FE ++++W++M+ + + + LF
Sbjct: 449 VSDSF-VSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFA 506
Query: 441 RMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRA 500
M ++ + V C + +G+++ + I G ++D+Y +
Sbjct: 507 LMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG-ILDMYVKC 565
Query: 501 NLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFAAKQILELEPD 551
+ A +S+P P+ + W +++S C +GE E F+ +++ + PD
Sbjct: 566 GDMSAAQFAFDSIP-VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 617
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/596 (32%), Positives = 321/596 (53%), Gaps = 45/596 (7%)
Query: 32 QLKQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLRL 91
Q+KQ+HAQI+R N VF+Q+ P+ H CN L+R
Sbjct: 34 QVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVR--VFNQVQEPNVHLCNSLIRA 91
Query: 92 LSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSD 151
+++ P F++ +++R G KA S S L + +H KLG SD
Sbjct: 92 HAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSD 151
Query: 152 PFIQTGLIAMYSACRR--IMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEM 209
++ LI YS C + DA +F+KMS RD V+WN M+ G ++G +L++EM
Sbjct: 152 IYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM 211
Query: 210 KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAM 269
D +S+ + +++ Y C M
Sbjct: 212 PQRDL-------------------ISW--------------------NTMLDGYARCREM 232
Query: 270 DLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQ--IVEKDLVCWSAMISGYAE 327
A EL++K+ ++ V + M+ GY+K G ++ AR +FD+ + K++V W+ +I+GYAE
Sbjct: 233 SKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAE 292
Query: 328 SDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSV 387
+EA +L ++M + D ++S ++AC G L+ IH+ ++ G + V
Sbjct: 293 KGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYV 352
Query: 388 NNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDI 447
NAL+DMYAKCGNL +A +VF ++P+K+++SW++M++ +HG+ A+ LF RM+ E I
Sbjct: 353 LNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGI 412
Query: 448 EPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAM 507
P+ V FI VL +C+HAGL++EG F SM + + P+ EHYGC+VDL R L++A+
Sbjct: 413 RPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAI 472
Query: 508 ELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKER 567
+++++MP PNV+IWG+L+ AC++H EV++ + +++L+P G +LSNIYA
Sbjct: 473 KVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAE 532
Query: 568 RWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVV 623
W V IR M + G+ K +S VE+ + +H F + D+ H +S +IY+ L ++
Sbjct: 533 DWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLI 588
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 360 bits (923), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 194/609 (31%), Positives = 324/609 (53%), Gaps = 42/609 (6%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N LR L+ ++ LY+ + R G K+ + S G ++H +K
Sbjct: 22 NVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTK 81
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDK--MSHRDAVTWNIMIDGYCQSGNYDQVL 203
G ++PF+ T LI+MY C + DAR VF++ S + +V +N +I GY +
Sbjct: 82 GGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAA 141
Query: 204 KLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMY 263
++ MK + D V + ++ C L G+++H + GL + ++ + MY
Sbjct: 142 YMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMY 201
Query: 264 VNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMIS 323
+ CG+++ R L FD++ K L+ W+A+IS
Sbjct: 202 MKCGSVEAGRRL-------------------------------FDEMPVKGLITWNAVIS 230
Query: 324 GYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGR 383
GY+++ + L+L+ +M+ + PD T++S +S+CA++GA + + NGF
Sbjct: 231 GYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVP 290
Query: 384 SLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMK 443
++ V+NA I MYA+CGNL +A+ VF+ MP K+++SW++MI + MHG + LF M
Sbjct: 291 NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMI 350
Query: 444 EEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLL 503
+ I P+G +F+ VL ACSH+GL ++G +LF +M E+ + P EHY C+VDL RA L
Sbjct: 351 KRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRL 410
Query: 504 RKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIY 563
+AME IESMP P+ +WG+L+ AC++H V++ E A +++E EP++ G V++SNIY
Sbjct: 411 DEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIY 470
Query: 564 AKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEV- 622
+ + + IR M + K+ S VE VH+F+ DR H+Q+ E+++ L+E+
Sbjct: 471 SDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELE 530
Query: 623 VSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRI 682
S ++L G HSE+LA+ +G+++ I ++KNLR+
Sbjct: 531 TSVMELAGNMDCDRGEEVSSTTRE-------HSERLAIAFGILNSIPGTE-ILVIKNLRV 582
Query: 683 CEDCHSFMK 691
CEDCH F+K
Sbjct: 583 CEDCHVFLK 591
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 10/246 (4%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++P N ++ S++ + L LY++++ G + + A
Sbjct: 213 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGA 272
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+G E+ L GF + F+ I+MY+ C + AR VFD M + V+W MI
Sbjct: 273 KKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGC 332
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAI-----HEFIMDN 247
Y G + L L+++M +PDG + VLSAC HSG G + E+ ++
Sbjct: 333 YGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEP 392
Query: 248 GLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK-HLVVSTAMLSGYAKHGMVKDARFI 306
G S LV++ G +D A E + + + V A+L H V A
Sbjct: 393 G----PEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELA 448
Query: 307 FDQIVE 312
F +++E
Sbjct: 449 FAKVIE 454
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 4/218 (1%)
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
W+ + A E++ L+ M PD + + +CA++ + +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS--WSSMINAFAMHGYANSA 435
K G V ALI MY KCG + A++VFE P+ + +S ++++I+ + + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
+F RMKE + + V +G++ C+ + G+ L + + G+ +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCV-KGGLDSEVAVLNSFIT 199
Query: 496 LYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
+Y + + L + MP +I W +++S +G
Sbjct: 200 MYMKCGSVEAGRRLFDEMP-VKGLITWNAVISGYSQNG 236
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 213/648 (32%), Positives = 329/648 (50%), Gaps = 84/648 (12%)
Query: 125 KAVSKASALYLGLEIHGLASKLG-FHSDPFIQTGLIAMY-SACRRIMDARLVFDKMSHRD 182
+A S + + +G G K G F SD + LI M+ +A VFDKMS +
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN 233
Query: 183 AVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE 242
VTW +MI Q G + ++ + +M S + D L +V SAC NLS GK +H
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Query: 243 FIMDNGLALSAHLQSALVNMYVNC---GAMDLARELYDKLSSKHLVVSTAMLSGYAKH-- 297
+ + +GL ++ +LV+MY C G++D R+++D++ ++ TA+++GY K+
Sbjct: 294 WAIRSGLV--DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCN 351
Query: 298 ---------------GMVKDARFIFD--------------------QIVEKDLVCWS--- 319
G V+ F F Q ++ L S
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVA 411
Query: 320 -AMISGYAESDQPQEALKLFNEMQLRNIVP------------------------------ 348
++IS + +SD+ ++A + F + +N+V
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471
Query: 349 -DQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEV 407
T S +S ANVG++ + IH+ K G + V NALI MY+KCG++ A V
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 408 FENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLV 467
F M +NVISW+SMI FA HG+A + F++M EE ++PN V ++ +L ACSH GLV
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 468 EEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMS 527
EG + F+SM +H I P+ EHY CMVDL CRA LL A E I +MPF +V++W + +
Sbjct: 592 SEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLG 651
Query: 528 ACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKE 587
AC+VH ELG+ AA++ILEL+P+ A + LSNIYA +W + +R+ M + + KE
Sbjct: 652 ACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKE 711
Query: 588 KASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTS----GXXXXXX 643
S +E+ +++H F + D H + +IY +L+ +++E+K Y P T
Sbjct: 712 GGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEEND 771
Query: 644 XXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMK 691
HSEK+A+ +GLIS + +R+ KNLR+C DCH+ MK
Sbjct: 772 EAEKERLLYQHSEKIAVAFGLISTSKSRP-VRVFKNLRVCGDCHNAMK 818
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 180/397 (45%), Gaps = 40/397 (10%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKM---SHR 181
K+ +A LG +H + D + LI++YS A VF+ M R
Sbjct: 70 KSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKR 129
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D V+W+ M+ Y +G +K++ E P+ V+ AC +S + G+
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTL 189
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVK 301
F+M G H +S ++ V C +D+ + G +
Sbjct: 190 GFLMKTG-----HFES---DVCVGCSLIDM------------------FVKG---ENSFE 220
Query: 302 DARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACA 361
+A +FD++ E ++V W+ MI+ + P+EA++ F +M L D+ T+ S SACA
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 362 NVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC---GNLIRAKEVFENMPRKNVIS 418
+ L+ + +H++A ++G V +L+DMYAKC G++ ++VF+ M +V+S
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVD--DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS 338
Query: 419 WSSMINAFAMH-GYANSAMNLFHRM-KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSS 476
W+++I + + A A+NLF M + +EPN F AC + G+++
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ 398
Query: 477 MINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
+ G+A ++ ++ +++ + A ES+
Sbjct: 399 AF-KRGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 190/458 (41%), Gaps = 62/458 (13%)
Query: 195 QSGNYDQVLKLYEEMKTSDTKP-DGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
+G+ + + M +P D V ++L +C + + GK +H +++ + +
Sbjct: 38 NAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDS 97
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
L ++L+++Y G A ++++ + + ++
Sbjct: 98 VLYNSLISLYSKSGDSAKAEDVFETMR----------------------------RFGKR 129
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
D+V WSAM++ Y + + +A+K+F E +VP+ + I AC+N + R
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTL 189
Query: 374 TYADKNG-FGRSLSVNNALIDMYAKCGNLIR-AKEVFENMPRKNVISWSSMINAFAMHGY 431
+ K G F + V +LIDM+ K N A +VF+ M NV++W+ MI G+
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
A+ F M E + V AC+ + G++L S I G+ E
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS-GLVDDVE--C 306
Query: 492 CMVDLYCRANL------LRKAMELIESMPFAPNVIIWGSLMSA----CQVHGEVELGEFA 541
+VD+Y + + RK + +E +V+ W +L++ C + E
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMED----HSVMSWTALITGYMKNCNL--ATEAINLF 360
Query: 542 AKQILE--LEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEV 599
++ I + +EP+H S+ + +D + +Q + + + AS+ N+ +
Sbjct: 361 SEMITQGHVEPNH----FTFSSAFKACGNLSDPRVGKQVLG-QAFKRGLASNSSVANSVI 415
Query: 600 HVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSG 637
+F+ +DR R E +SE LVSY G
Sbjct: 416 SMFVKSDRMEDAQRAF-----ESLSEKNLVSYNTFLDG 448
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 357 bits (916), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/557 (35%), Positives = 305/557 (54%), Gaps = 42/557 (7%)
Query: 140 HGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNY 199
HG ++ D + LI YS C + AR VFD M R V+WN MI Y ++
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSAL 259
+ L ++ EM+ K + +VLSACG
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACG------------------------------ 173
Query: 260 VNMYVNCGAMDLARELYDKLSSK-----HLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
VNC A++ + LS K +L V TA+L YAK GM+KDA +F+ + +K
Sbjct: 174 ----VNCDALECKK--LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKS 227
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
V WS+M++GY ++ +EAL L+ Q ++ +Q T+ S I AC+N+ AL + + +H
Sbjct: 228 SVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHA 287
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
K+GFG ++ V ++ +DMYAKCG+L + +F + KN+ W+++I+ FA H
Sbjct: 288 VICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKE 347
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV 494
M LF +M+++ + PN V F +L C H GLVEEG++ F M +G++P HY CMV
Sbjct: 348 VMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMV 407
Query: 495 DLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDG 554
D+ RA LL +A ELI+S+PF P IWGSL+++C+V+ +EL E AA+++ ELEP++ G
Sbjct: 408 DILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAG 467
Query: 555 ALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSRE 614
V+LSNIYA ++W ++ R+ + + + K + S ++I ++VH F + + H + RE
Sbjct: 468 NHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIRE 527
Query: 615 IYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCI 674
I L+ +V + + Y PS HSEKLAL +GL+ + S +
Sbjct: 528 ICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMC-LPESSPV 586
Query: 675 RIVKNLRICEDCHSFMK 691
RI+KNLRIC DCH FMK
Sbjct: 587 RIMKNLRICVDCHEFMK 603
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 155/341 (45%), Gaps = 35/341 (10%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N ++ L +R+ L ++ ++R G A ++H L+ K
Sbjct: 131 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVK 190
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL 205
+ ++ T L+ +Y+ C I DA VF+ M + +VTW+ M+ GY Q+ NY++ L L
Sbjct: 191 TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLL 250
Query: 206 YEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVN 265
Y + + + L +V+ AC + L GK +H I +G + + S+ V+MY
Sbjct: 251 YRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK 310
Query: 266 CGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGY 325
CG++ + ++ ++ K+L + ++SG+AKH
Sbjct: 311 CGSLRESYIIFSEVQEKNLELWNTIISGFAKHA--------------------------- 343
Query: 326 AESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSL 385
+P+E + LF +MQ + P+++T S +S C + G + + R + +G S
Sbjct: 344 ----RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM-RTTYGLSP 398
Query: 386 SV--NNALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMI 423
+V + ++D+ + G L A E+ +++P S W S++
Sbjct: 399 NVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/563 (33%), Positives = 302/563 (53%), Gaps = 34/563 (6%)
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
AL G +H K + +++T L+ Y C + DAR V D+M ++ V+W MI
Sbjct: 67 ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 126
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
Y Q+G+ + L ++ EM SD KP+ TVL++C + L GK IH I+
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV------ 180
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ YD H+ V +++L YAK G +K+AR IF+ +
Sbjct: 181 ---------------------KWNYDS----HIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
E+D+V +A+I+GYA+ +EAL++F+ + + P+ +T S ++A + + L +
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
H + + + N+LIDMY+KCGNL A+ +F+NMP + ISW++M+ ++ HG
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335
Query: 432 ANSAMNLFHRMKEED-IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI-NEHGIAPRHEH 489
+ LF M++E ++P+ V + VL CSH + + G +F M+ E+G P EH
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH 395
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
YGC+VD+ RA + +A E I+ MP P + GSL+ AC+VH V++GE ++++E+E
Sbjct: 396 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIE 455
Query: 550 PDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYH 609
P++ G V+LSN+YA RW DV +R M K ++KE S ++ +H F DR H
Sbjct: 456 PENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTH 515
Query: 610 KQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRR 669
+ E+ K++E+ ++K Y P S HSEKLAL +GLI+
Sbjct: 516 PRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGE 575
Query: 670 KESCIRIVKNLRICEDCHSFMKL 692
IR+ KNLRIC DCH+F K+
Sbjct: 576 GIP-IRVFKNLRICVDCHNFAKI 597
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 174/394 (44%), Gaps = 38/394 (9%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
V ++P + ++ S++ L ++ ++ R + +AS
Sbjct: 109 VLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASG 168
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L LG +IHGL K + S F+ + L+ MY+ +I +AR +F+ + RD V+ +I G
Sbjct: 169 LGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG 228
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y Q G ++ L+++ + + P+ V ++L+A L +GK H ++ L
Sbjct: 229 YAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY 288
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
A LQ++L++MY CG + AR L+D + + + AML GY+KHG+
Sbjct: 289 AVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL------------- 335
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQ-LRNIVPDQITMLSAISACANVGALAQAR- 370
+E L+LF M+ + + PD +T+L+ +S C++ G +
Sbjct: 336 ------------------GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH-GRMEDTGL 376
Query: 371 --WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMINAFA 427
+ A + G ++DM + G + A E + MP K S++ A
Sbjct: 377 NIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACR 436
Query: 428 MHGYANSAMNLFHRMKEEDIEPNG-VIFIGVLYA 460
+H + ++ R+ E + E G + + LYA
Sbjct: 437 VHLSVDIGESVGRRLIEIEPENAGNYVILSNLYA 470
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 86/159 (54%), Gaps = 3/159 (1%)
Query: 357 ISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNV 416
++AC + AL + +H + K + + + L+ Y KC L A++V + MP KNV
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 417 ISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSS 476
+SW++MI+ ++ G+++ A+ +F M D +PN F VL +C A + G+++
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 477 MINEHGIAPRHEHYG-CMVDLYCRANLLRKAMELIESMP 514
++ + H G ++D+Y +A +++A E+ E +P
Sbjct: 179 IVKWN--YDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 210/626 (33%), Positives = 322/626 (51%), Gaps = 38/626 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF +P + + L+ + + +L L+ ++ R G KA +A
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L GL+IHG K+GF + L+ MYS C RI +A VF ++ R ++WN MI G
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 193 YCQSGNYDQVLKLYEEMKTSDTK--PDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
+ +G + L + M+ ++ K PD L ++L AC +G + GK IH F++ +G
Sbjct: 183 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 251 L--SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFD 308
SA + +LV++YV CG + AR+ FD
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARK-------------------------------AFD 271
Query: 309 QIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQ 368
QI EK ++ WS++I GYA+ + EA+ LF +Q N D + S I A+ L Q
Sbjct: 272 QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ 331
Query: 369 ARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAM 428
+ + A K G SV N+++DMY KCG + A++ F M K+VISW+ +I +
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 429 HGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHE 488
HG ++ +F+ M +IEP+ V ++ VL ACSH+G+++EG++LFS ++ HGI PR E
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451
Query: 489 HYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILEL 548
HY C+VDL RA L++A LI++MP PNV IW +L+S C+VHG++ELG+ K +L +
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 511
Query: 549 EPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRY 608
+ + V++SN+Y + WN+ G R+ KG+ KE S VEI EVH F +
Sbjct: 512 DAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDS 571
Query: 609 HKQSREIYKKLEEVVSELK-LVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISK 667
H + I + L+E L+ + Y HSEKLA+ L +
Sbjct: 572 HPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATG 631
Query: 668 --RRKESCIRIVKNLRICEDCHSFMK 691
+K IR+ KNLR+C DCH F+K
Sbjct: 632 GLNQKGKTIRVFKNLRVCVDCHEFIK 657
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 202/435 (46%), Gaps = 47/435 (10%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G ++H K G + LI MY CR + A VFD M R+ V+W+ ++ G+
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
+G+ L L+ EM P+ T L ACG L G IH F + G + +
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
++LV+MY CG ++ A +++ ++ + L+ AM++G+
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH------------------- 185
Query: 316 VCWSAMISGYAESDQPQEALKLFNEMQLRNIV--PDQITMLSAISACANVGALAQARWIH 373
+GY +AL F MQ NI PD+ T+ S + AC++ G + + IH
Sbjct: 186 -------AGYG-----SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIH 233
Query: 374 TYADKNGF--GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
+ ++GF S ++ +L+D+Y KCG L A++ F+ + K +ISWSS+I +A G
Sbjct: 234 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE 293
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMIN-EHGIAPRHEHY 490
AM LF R++E + + + ++ + L+ +G+++ + + G+
Sbjct: 294 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET--SVL 351
Query: 491 GCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILEL-- 548
+VD+Y + L+ +A + M +VI W +++ HG LG+ + + E+
Sbjct: 352 NSVVDMYLKCGLVDEAEKCFAEMQL-KDVISWTVVITGYGKHG---LGKKSVRIFYEMLR 407
Query: 549 ---EPDHDGALVVLS 560
EPD L VLS
Sbjct: 408 HNIEPDEVCYLAVLS 422
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 172/365 (47%), Gaps = 48/365 (13%)
Query: 221 LCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLS 280
L ++L C G G +H +++ +G L+ + L++MY C +A +
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK------ 62
Query: 281 SKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNE 340
+FD + E+++V WSA++SG+ + + +L LF+E
Sbjct: 63 -------------------------VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSE 97
Query: 341 MQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGN 400
M + I P++ T + + AC + AL + IH + K GF + V N+L+DMY+KCG
Sbjct: 98 MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 157
Query: 401 LIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIE--PNGVIFIGVL 458
+ A++VF + +++ISW++MI F GY + A++ F M+E +I+ P+ +L
Sbjct: 158 INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 217
Query: 459 YACSHAGLVEEGQKLFSSMINEHGIAPRHEHY-GCMVDLYCRANLL---RKAMELIESMP 514
ACS G++ G+++ ++ P G +VDLY + L RKA + I+
Sbjct: 218 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE-- 275
Query: 515 FAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDG-ALVVLSNIYAKERRWNDVG 573
+I W SL+ GE K++ EL D AL + ++A D
Sbjct: 276 --KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA------DFA 327
Query: 574 LIRQS 578
L+RQ
Sbjct: 328 LLRQG 332
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 97/184 (52%), Gaps = 3/184 (1%)
Query: 346 IVPDQ-ITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRA 404
++P+Q ++S + C G Q +H Y K+G G +L +N LIDMY KC + A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 405 KEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHA 464
+VF++MP +NV+SWS++++ ++G +++LF M + I PN F L AC
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 465 GLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGS 524
+E+G ++ + + G E +VD+Y + + +A ++ + ++I W +
Sbjct: 121 NALEKGLQIHGFCL-KIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNA 178
Query: 525 LMSA 528
+++
Sbjct: 179 MIAG 182
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 356 bits (913), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 187/568 (32%), Positives = 298/568 (52%), Gaps = 32/568 (5%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
K + L LG +IH K F + ++ + LI MY+ ++ A + + + +D V
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 557
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
+W MI GY Q D+ L + +M + D V L +SAC L G+ IH
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 617
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDAR 304
+G + Q+ALV +Y CG ++++
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGK-------------------------------IEESY 646
Query: 305 FIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVG 364
F+Q D + W+A++SG+ +S +EAL++F M I + T SA+ A +
Sbjct: 647 LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA 706
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
+ Q + +H K G+ V NALI MYAKCG++ A++ F + KN +SW+++IN
Sbjct: 707 NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 766
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
A++ HG+ + A++ F +M ++ PN V +GVL ACSH GLV++G F SM +E+G++
Sbjct: 767 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLS 826
Query: 485 PRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQ 544
P+ EHY C+VD+ RA LL +A E I+ MP P+ ++W +L+SAC VH +E+GEFAA
Sbjct: 827 PKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHH 886
Query: 545 ILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMM 604
+LELEP+ V+LSN+YA ++W+ L RQ M KG+ KE S +E+ N +H F +
Sbjct: 887 LLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYV 946
Query: 605 ADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGL 664
D+ H + EI++ +++ + Y HSEKLA+ +GL
Sbjct: 947 GDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGL 1006
Query: 665 ISKRRKESCIRIVKNLRICEDCHSFMKL 692
+S I ++KNLR+C DCH+++K
Sbjct: 1007 LSLPATVP-INVMKNLRVCNDCHAWIKF 1033
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 204/445 (45%), Gaps = 33/445 (7%)
Query: 92 LSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSD 151
LS++ + L+ + +G A K +L +G ++HGL KLGF SD
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 152 PFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKT 211
++ L+++Y ++ A +F MS RDAVT+N +I+G Q G ++ ++L++ M
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 212 SDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDL 271
+PD L +++ AC G L G+ +H + G A + ++ AL+N+Y C ++
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 272 ARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQP 331
A + + + VE ++V W+ M+ Y D
Sbjct: 443 ALD------------------------------YFLETEVE-NVVLWNVMLVAYGLLDDL 471
Query: 332 QEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNAL 391
+ + ++F +MQ+ IVP+Q T S + C +G L IH+ K F + V + L
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL 531
Query: 392 IDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNG 451
IDMYAK G L A ++ K+V+SW++MI + + + + A+ F +M + I +
Sbjct: 532 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 591
Query: 452 VIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIE 511
V + AC+ ++EGQ++ + G + +V LY R + ++ E
Sbjct: 592 VGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGKIEESYLAFE 650
Query: 512 SMPFAPNVIIWGSLMSACQVHGEVE 536
N I W +L+S Q G E
Sbjct: 651 QTEAGDN-IAWNALVSGFQQSGNNE 674
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 190/420 (45%), Gaps = 36/420 (8%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G ++H KLG S+ + L Y + A VFD+M R TWN MI
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSAC-GHSGNLSYGKAIHEFIMDNGLALSAH 254
+V L+ M + + P+ VL AC G S + IH I+ GL S
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV 223
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
+ + L+++Y G +DLAR ++D L KD
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRL-------------------------------KD 252
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
W AMISG ++++ EA++LF +M + I+P S +SAC + +L +H
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
K GF V NAL+ +Y GNLI A+ +F NM +++ ++++++IN + GY
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 372
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV 494
AM LF RM + +EP+ ++ ACS G + GQ+L + + G A ++ G ++
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALL 431
Query: 495 DLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFAAKQILELEPDH 552
+LY + + A++ NV++W ++ A + ++ F QI E+ P+
Sbjct: 432 NLYAKCADIETALDYFLETE-VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 211/460 (45%), Gaps = 40/460 (8%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++P N++++ L+ L+ ++ +A S
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 133 LYLGLE-IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
+ +E IH G + LI +YS + AR VFD + +D +W MI
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
G ++ + ++L+ +M P +VLSAC +L G+ +H ++ G +
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
++ +ALV++Y + G + +S++H IF +
Sbjct: 322 DTYVCNALVSLYFHLGNL---------ISAEH----------------------IFSNMS 350
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
++D V ++ +I+G ++ ++A++LF M L + PD T+ S + AC+ G L + +
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
+H Y K GF + + AL+++YAKC ++ A + F +NV+ W+ M+ A+ +
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
++ +F +M+ E+I PN + +L C G +E G+++ S +I + + Y
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN---FQLNAYV 527
Query: 492 C--MVDLYCRANLLRKAMELIESMPFA-PNVIIWGSLMSA 528
C ++D+Y + L A +++ + FA +V+ W ++++
Sbjct: 528 CSVLIDMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMIAG 565
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 2/241 (0%)
Query: 74 FSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASAL 133
F Q D N L+ +S + L ++ ++ R G KA S+ + +
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 134 YLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGY 193
G ++H + +K G+ S+ + LI+MY+ C I DA F ++S ++ V+WN +I+ Y
Sbjct: 709 KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAY 768
Query: 194 CQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI-MDNGLALS 252
+ G + L +++M S+ +P+ V L VLSAC H G + G A E + + GL+
Sbjct: 769 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSK-HLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+V+M G + A+E ++ K +V +LS H ++ F ++
Sbjct: 829 PEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 888
Query: 312 E 312
E
Sbjct: 889 E 889
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 133/309 (43%), Gaps = 27/309 (8%)
Query: 267 GAMDLARELYDKLSSKHL----VVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMI 322
G++D R+L+ ++ L +S + Y G + A +FD++ E+ + W+ MI
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 323 SGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISAC-ANVGALAQARWIHTYADKNGF 381
A + E LF M N+ P++ T + AC A IH G
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 382 GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHR 441
S V N LID+Y++ G + A+ VF+ + K+ SW +MI+ + + A+ LF
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 442 MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPR----HEHYGC--MVD 495
M I P F VL AC +E G++L HG+ + + Y C +V
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQL-------HGLVLKLGFSSDTYVCNALVS 331
Query: 496 LYCRANLLRKAMELIESM----PFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPD 551
LY L A + +M N +I G +S C +GE + F + LEPD
Sbjct: 332 LYFHLGNLISAEHIFSNMSQRDAVTYNTLING--LSQCG-YGEKAMELFKRMHLDGLEPD 388
Query: 552 HD--GALVV 558
+ +LVV
Sbjct: 389 SNTLASLVV 397
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 320 AMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV-GALAQARWIHTYADK 378
A IS Y D+ + K + ++ R I P+ T+ + C G+L + R +H+ K
Sbjct: 55 AAISVYISEDESFQE-KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILK 113
Query: 379 NGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNL 438
G + ++ L D Y G+L A +VF+ MP + + +W+ MI A L
Sbjct: 114 LGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGL 173
Query: 439 FHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYC 498
F RM E++ PN F GVL AC + + + + I G+ ++DLY
Sbjct: 174 FVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYS 233
Query: 499 RANLLRKAMELIESM 513
R + A + + +
Sbjct: 234 RNGFVDLARRVFDGL 248
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 355 bits (910), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 323/622 (51%), Gaps = 35/622 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F +IP D+ N L+ + ++ L+ K+R+ G KAV
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
LG ++H L+ GF D + ++ YS R+++ R++FD+M D V++N++I
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y Q+ Y+ L + EM+ T+LS + +L G+ +H +
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
H+ ++LV+MY C M ++A IF + +
Sbjct: 386 LHVGNSLVDMYAKCE-------------------------------MFEEAELIFKSLPQ 414
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
+ V W+A+ISGY + LKLF +M+ N+ DQ T + + A A+ +L + +
Sbjct: 415 RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQL 474
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H + ++G ++ + L+DMYAKCG++ A +VFE MP +N +SW+++I+A A +G
Sbjct: 475 HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDG 534
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
+A+ F +M E ++P+ V +GVL ACSH G VE+G + F +M +GI P+ +HY C
Sbjct: 535 EAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYAC 594
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
M+DL R +A +L++ MPF P+ I+W S+++AC++H L E AA+++ +E
Sbjct: 595 MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR 654
Query: 553 DGALVV-LSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQ 611
D A V +SNIYA W V ++++M +GI K A S VE+N+++HVF D+ H
Sbjct: 655 DAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPN 714
Query: 612 SREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKE 671
EI +K+ E+ +E++ Y P TS +HSE+LA+ + LIS E
Sbjct: 715 GDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALIST--PE 772
Query: 672 SC-IRIVKNLRICEDCHSFMKL 692
C I ++KNLR C DCH+ +KL
Sbjct: 773 GCPIVVMKNLRACRDCHAAIKL 794
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 208/427 (48%), Gaps = 37/427 (8%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSAC--RRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
++H A KLGF ++PF+ + + S C RR+ A ++F+++ +D+VT+N +I GY +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
G Y + + L+ +M+ S +P VL A + + G+ +H + G
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGF------ 281
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
S+ V +L Y+KH V + R +FD++ E D
Sbjct: 282 -------------------------SRDASVGNQILDFYSKHDRVLETRMLFDEMPELDF 316
Query: 316 VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTY 375
V ++ +IS Y+++DQ + +L F EMQ + +S AN+ +L R +H
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 376 ADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSA 435
A L V N+L+DMYAKC A+ +F+++P++ +SW+++I+ + G +
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
+ LF +M+ ++ + F VL A + + G++L + +I + G +VD
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVD 495
Query: 496 LYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFAAKQILELEPDHD 553
+Y + ++ A+++ E MP N + W +L+SA +G+ E +G FA L+PD
Sbjct: 496 MYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554
Query: 554 GALVVLS 560
L VL+
Sbjct: 555 SILGVLT 561
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 169/383 (44%), Gaps = 35/383 (9%)
Query: 149 HSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEE 208
H + +I+ + + AR +FD M R VTW I++ Y ++ ++D+ KL+ +
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 209 M--KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNC 266
M +S T PD V T+L C + + +H F + G
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD---------------- 179
Query: 267 GAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYA 326
++ L VS +L Y + + A +F++I EKD V ++ +I+GY
Sbjct: 180 -------------TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 327 ESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLS 386
+ E++ LF +M+ P T + A + A + +H + GF R S
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 387 VNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEED 446
V N ++D Y+K ++ + +F+ MP + +S++ +I++++ ++++ F M+
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 447 IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG-CMVDLYCRANLLRK 505
+ F +L ++ ++ G++L + A H G +VD+Y + + +
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQAL--LATADSILHVGNSLVDMYAKCEMFEE 404
Query: 506 AMELIESMPFAPNVIIWGSLMSA 528
A + +S+P + W +L+S
Sbjct: 405 AELIFKSLP-QRTTVSWTALISG 426
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 135/275 (49%), Gaps = 5/275 (1%)
Query: 244 IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDA 303
I+ G + +V + G + AR++YD++ K+ V + M+SG+ K G V A
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSA 98
Query: 304 RFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN--IVPDQITMLSAISACA 361
R +FD + ++ +V W+ ++ YA + EA KLF +M + +PD +T + + C
Sbjct: 99 RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Query: 362 NVGALAQARWIHTYADKNGFGRS--LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISW 419
+ +H +A K GF + L+V+N L+ Y + L A +FE +P K+ +++
Sbjct: 159 DAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTF 218
Query: 420 SSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMIN 479
+++I + G +++LF +M++ +P+ F GVL A GQ+L + +
Sbjct: 219 NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVT 278
Query: 480 EHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP 514
G + ++D Y + + + + L + MP
Sbjct: 279 T-GFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 354 bits (909), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 288/523 (55%), Gaps = 24/523 (4%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF I P + N ++R S SP P L YQ++ R G KA S
Sbjct: 63 VFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRD 122
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+ G +HG K GF + ++ T L+ MY C + VF+ + + V W +I G
Sbjct: 123 IQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISG 182
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
+ + + ++ + EM+++ K + I+ +L ACG ++ GK H F+ GL
Sbjct: 183 FVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL--QGLGFD 240
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ QS + +++++T+++ YAK G ++ AR++FD + E
Sbjct: 241 PYFQSKV---------------------GFNVILATSLIDMYAKCGDLRTARYLFDGMPE 279
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
+ LV W+++I+GY+++ +EAL +F +M I PD++T LS I A G + I
Sbjct: 280 RTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSI 339
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H Y K GF + ++ AL++MYAK G+ AK+ FE++ +K+ I+W+ +I A HG+
Sbjct: 340 HAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHG 399
Query: 433 NSAMNLFHRMKEE-DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
N A+++F RM+E+ + P+G+ ++GVLYACSH GLVEEGQ+ F+ M + HG+ P EHYG
Sbjct: 400 NEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYG 459
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPD 551
CMVD+ RA +A L+++MP PNV IWG+L++ C +H +EL + + E E
Sbjct: 460 CMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEEL 519
Query: 552 HDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVE 594
G V+LSNIYAK RW DV LIR+SM +K + K S VE
Sbjct: 520 GSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 12/267 (4%)
Query: 303 ARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACAN 362
AR +F+ I + W++MI GY+ S P +AL + EM + PD T + AC+
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 363 VGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSM 422
+ + +H + K GF ++ V+ L+ MY CG + VFE++P+ NV++W S+
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 423 INAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHG 482
I+ F + + A+ F M+ ++ N I + +L AC + G K F + G
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLG 238
Query: 483 IAPRHEH--------YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE 534
P + ++D+Y + LR A L + MP ++ W S+++ +G+
Sbjct: 239 FDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMP-ERTLVSWNSIITGYSQNGD 297
Query: 535 VE--LGEFAAKQILELEPDHDGALVVL 559
E L F L + PD L V+
Sbjct: 298 AEEALCMFLDMLDLGIAPDKVTFLSVI 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 5/175 (2%)
Query: 357 ISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCG---NLIRAKEVFENMPR 413
+S N +L + +H K+ R++ + LID C NL A+ VFE++
Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69
Query: 414 KNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKL 473
+V W+SMI ++ + A+ + M + P+ F VL ACS ++ G +
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 474 FSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
++ + G C++ +Y + + + E +P NV+ WGSL+S
Sbjct: 130 HGFVV-KTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP-QWNVVAWGSLISG 182
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 181/536 (33%), Positives = 303/536 (56%), Gaps = 5/536 (0%)
Query: 75 SQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALY 134
S + P N++L+ L+ + L L+ +LR G K++ + +
Sbjct: 4 SLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVI 63
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
G ++HG A K G D ++ L+ MY++ +I VFD+M RD V+WN +I Y
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 195 QSGNYDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
+G ++ + +++ M + S+ K D + + LSAC NL G+ I+ F++ +S
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSV 182
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
+ +ALV+M+ CG +D AR ++D + K++ T+M+ GY G + +AR +F++ K
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
D+V W+AM++GY + ++ EAL+LF MQ I PD ++S ++ CA GAL Q +WIH
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 374 TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYAN 433
Y ++N V AL+DMYAKCG + A EVF + ++ SW+S+I AM+G +
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSG 362
Query: 434 SAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCM 493
A++L++ M+ + + + F+ VL AC+H G V EG+K+F SM H + P+ EH C+
Sbjct: 363 RALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCL 422
Query: 494 VDLYCRANLLRKAMELIESMPFAPN---VIIWGSLMSACQVHGEVELGEFAAKQILELEP 550
+DL CRA LL +A ELI+ M + V ++ SL+SA + +G V++ E A+++ ++E
Sbjct: 423 IDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 482
Query: 551 DHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMAD 606
A +L+++YA RW DV +R+ M + GI K S +EI+ H F++ D
Sbjct: 483 SDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGD 538
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 190/540 (35%), Positives = 294/540 (54%), Gaps = 37/540 (6%)
Query: 153 FIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTS 212
F+ LI MY + DA +FD+M R+ ++W MI Y + + + L+L M
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 213 DTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLA 272
+ +P+ +VL +C +S + +H I+ GL ++SAL++++
Sbjct: 157 NVRPNVYTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVF--------- 204
Query: 273 RELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQ 332
AK G +DA +FD++V D + W+++I G+A++ +
Sbjct: 205 ----------------------AKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSD 242
Query: 333 EALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALI 392
AL+LF M+ + +Q T+ S + AC + L H + K + + L +NNAL+
Sbjct: 243 VALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALV 300
Query: 393 DMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGV 452
DMY KCG+L A VF M ++VI+WS+MI+ A +GY+ A+ LF RMK +PN +
Sbjct: 301 DMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYI 360
Query: 453 IFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIES 512
+GVL+ACSHAGL+E+G F SM +GI P EHYGCM+DL +A L A++L+
Sbjct: 361 TIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNE 420
Query: 513 MPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDV 572
M P+ + W +L+ AC+V + L E+AAK+++ L+P+ G +LSNIYA ++W+ V
Sbjct: 421 MECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSV 480
Query: 573 GLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYT 632
IR M ++GI KE S +E+N ++H F++ D H Q E+ KKL +++ L + Y
Sbjct: 481 EEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYV 540
Query: 633 PSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
P T+ HSEKLAL +GL++ E IRI KNLRIC DCH F KL
Sbjct: 541 PETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMT-LPIEKVIRIRKNLRICGDCHVFCKL 599
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 152/329 (46%), Gaps = 11/329 (3%)
Query: 209 MKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGA 268
++ S + D +L + + + +L + + +GL + S L+ ++ A
Sbjct: 17 LRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRA 76
Query: 269 MD----LARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISG 324
+ + R LY + + +++ Y K ++ DA +FDQ+ +++++ W+ MIS
Sbjct: 77 VHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISA 136
Query: 325 YAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS 384
Y++ Q+AL+L M N+ P+ T S + +C ++ R +H K G
Sbjct: 137 YSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESD 193
Query: 385 LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE 444
+ V +ALID++AK G A VF+ M + I W+S+I FA + ++ A+ LF RMK
Sbjct: 194 VFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKR 253
Query: 445 EDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLR 504
VL AC+ L+E G + ++ + +VD+YC+ L
Sbjct: 254 AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN---NALVDMYCKCGSLE 310
Query: 505 KAMELIESMPFAPNVIIWGSLMSACQVHG 533
A+ + M +VI W +++S +G
Sbjct: 311 DALRVFNQMK-ERDVITWSTMISGLAQNG 338
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 134/286 (46%), Gaps = 41/286 (14%)
Query: 145 KLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLK 204
K G SD F+++ LI +++ DA VFD+M DA+ WN +I G+ Q+ D L+
Sbjct: 187 KEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 246
Query: 205 LYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM--DNGLALSAHLQSALVNM 262
L++ MK + + L +VL AC L G H I+ D L L+ +ALV+M
Sbjct: 247 LFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN----NALVDM 302
Query: 263 YVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMI 322
Y CG+++ A +++++ + ++ + M+SG A++G
Sbjct: 303 YCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY----------------------- 339
Query: 323 SGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFG 382
QEALKLF M+ P+ IT++ + AC++ G L W + + K +G
Sbjct: 340 --------SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYG 390
Query: 383 RSLSVNN--ALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINA 425
+ +ID+ K G L A ++ M + ++W +++ A
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++ D N ++ +++ L L+++++R G +A + +
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L LG++ H K + D + L+ MY C + DA VF++M RD +TW+ MI G
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYG 237
Q+G + LKL+E MK+S TKP+ + + VL AC H+G L G
Sbjct: 334 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/562 (33%), Positives = 320/562 (56%), Gaps = 9/562 (1%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAM------YSACRRIMD-ARLVFDKMSHRDAVTWNIMID 191
IHG + SD F+ + L+A+ ++ ++ A +F ++ + + +N++I
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
+ + Y +M S PD + ++ A + G+ H I+ G
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN 150
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+++++LV+MY NCG + A ++ ++ + +V T+M++GY K GMV++AR +FD++
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
++L WS MI+GYA+++ ++A+ LF M+ +V ++ M+S IS+CA++GAL
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGER 270
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
+ Y K+ +L + AL+DM+ +CG++ +A VFE +P + +SWSS+I A+HG+
Sbjct: 271 AYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGH 330
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
A+ AM+ F +M P V F VL ACSH GLVE+G +++ +M +HGI PR EHYG
Sbjct: 331 AHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYG 390
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPD 551
C+VD+ RA L +A I M PN I G+L+ AC+++ E+ E +++++P+
Sbjct: 391 CIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPE 450
Query: 552 HDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMA-DRYHK 610
H G V+LSNIYA +W+ + +R M K + K S +EI+ +++ F M D+ H
Sbjct: 451 HSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHP 510
Query: 611 QSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRK 670
+ +I +K EE++ +++L+ Y +T HSEKLA+ YG++ K +
Sbjct: 511 EMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMM-KTKP 569
Query: 671 ESCIRIVKNLRICEDCHSFMKL 692
+ IRIVKNLR+CEDCH+ KL
Sbjct: 570 GTTIRIVKNLRVCEDCHTVTKL 591
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 162/349 (46%), Gaps = 13/349 (3%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+FSQI NP+ N L+R S P Y ++ + KA S+
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+ +G + H + GF +D +++ L+ MY+ C I A +F +M RD V+W M+ G
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAI--HEFIMDNGLA 250
YC+ G + ++++EM P + + G++ N + KAI EF+ G+
Sbjct: 193 YCKCGMVENAREMFDEM------PHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKH----LVVSTAMLSGYAKHGMVKDARFI 306
+ + ++++ + GA++ Y+ + H L++ TA++ + + G ++ A +
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 307 FDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGAL 366
F+ + E D + WS++I G A +A+ F++M +P +T + +SAC++ G +
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 367 AQARWIHTYADKN-GFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK 414
+ I+ K+ G L ++DM + G L A+ M K
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVK 415
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 309/557 (55%), Gaps = 5/557 (0%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGN 198
+H KLG + L+ +Y C A VFD+M HRD + W ++ Q+
Sbjct: 25 LHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANL 84
Query: 199 YDQVLKLYEEMKTSDT-KPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
+ L ++ + +S +PD + ++ AC + G++ +G+ +H + + A ++S
Sbjct: 85 SGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKS 144
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC 317
+LV+MY CG ++ A+ ++D + K+ + TAM+SGYAK G ++A +F + K+L
Sbjct: 145 SLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYS 204
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNI-VPDQITMLSAISACANVGALAQARWIHTYA 376
W+A+ISG+ +S + EA +F EM+ + + D + + S + ACAN+ A R +H
Sbjct: 205 WTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLV 264
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAM 436
GF + ++NALIDMYAKC ++I AK++F M ++V+SW+S+I A HG A A+
Sbjct: 265 IALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKAL 324
Query: 437 NLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDL 496
L+ M ++PN V F+G++YACSH G VE+G++LF SM ++GI P +HY C++DL
Sbjct: 325 ALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDL 384
Query: 497 YCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELG-EFAAKQILELEPDHDGA 555
R+ LL +A LI +MPF P+ W +L+SAC+ G ++G A + +
Sbjct: 385 LGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPST 444
Query: 556 LVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREI 615
++LSNIYA W V R+ + + K+ S VE+ E VF + H +I
Sbjct: 445 YILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDI 504
Query: 616 YKKLEEVVSELKLVS-YTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCI 674
++ L+++ E+++ + Y P TS WHSE+ A+ YGL+ K + I
Sbjct: 505 FRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLL-KAVPGTPI 563
Query: 675 RIVKNLRICEDCHSFMK 691
RIVKNLR+C DCH +K
Sbjct: 564 RIVKNLRVCGDCHVVLK 580
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 9/229 (3%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVT 185
A + +A G ++HGL LGF S FI LI MY+ C ++ A+ +F +M HRD V+
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
W +I G Q G ++ L LY++M + KP+ V ++ AC H G + G+ + + +
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 246 -DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLS-SKHLVVSTAMLSGYAKHGMVKDA 303
D G+ S + L+++ G +D A L + A+LS + G +
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 426
Query: 304 RFIFDQIVE----KDLVCWSAMISGYAESD---QPQEALKLFNEMQLRN 345
I D +V KD + + + YA + + EA + EM++R
Sbjct: 427 IRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRK 475
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 3/184 (1%)
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
L + CA L A+ +H + K G + + N L+++Y KCG A +VF+ MP
Sbjct: 7 LHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH 66
Query: 414 KNVISWSSMINAFAMHGYANSAM-NLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQK 472
++ I+W+S++ A + + + P+ +F ++ AC++ G ++ G++
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 473 LFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVH 532
+ I A +VD+Y + LL A + +S+ N I W +++S
Sbjct: 127 VHCHFIVSE-YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR-VKNTISWTAMVSGYAKS 184
Query: 533 GEVE 536
G E
Sbjct: 185 GRKE 188
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 352 bits (903), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 195/576 (33%), Positives = 312/576 (54%), Gaps = 46/576 (7%)
Query: 126 AVSKASALYLGLEIHGLASKLG-FHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
A S L G E+H A K G + F+ + L+ MY C++++ R VFD M R
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 370
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTS-DTKPDGVILCTVLSACGHSGNLSYGKAIHEF 243
WN MI GY Q+ + + L L+ M+ S + + V+ AC SG S +AIH F
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 244 IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDA 303
++ GL +Q+ L++MY G +D+A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR----------------------------- 461
Query: 304 RFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQ-----------LRNIVPDQIT 352
IF ++ ++DLV W+ MI+GY S+ ++AL L ++MQ ++ P+ IT
Sbjct: 462 --IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 353 MLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP 412
+++ + +CA + ALA+ + IH YA KN ++V +AL+DMYAKCG L +++VF+ +P
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 413 RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQK 472
+KNVI+W+ +I A+ MHG A++L M + ++PN V FI V ACSH+G+V+EG +
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 473 LFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPN-VIIWGSLMSACQV 531
+F M ++G+ P +HY C+VDL RA +++A +L+ MP N W SL+ A ++
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699
Query: 532 HGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASS 591
H +E+GE AA+ +++LEP+ V+L+NIY+ W+ +R++M +G+ KE S
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 592 RVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXX 651
+E +EVH F+ D H QS ++ LE + ++ Y P TS
Sbjct: 760 WIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILL 819
Query: 652 XWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCH 687
HSEKLA+ +G+++ + IR+ KNLR+C DCH
Sbjct: 820 CGHSEKLAIAFGILNT-SPGTIIRVAKNLRVCNDCH 854
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 197/415 (47%), Gaps = 47/415 (11%)
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
L +G ++H + G + FI L+AMY ++ ++++ RD VTWN ++
Sbjct: 217 GLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNG-LA 250
CQ+ + L+ EM +PD + +VL AC H L GK +H + + NG L
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 335
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
++ + SALV+MY NC + R ++D + + + + AM++G
Sbjct: 336 ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG----------------- 378
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLR-NIVPDQITMLSAISACANVGALAQA 369
Y++++ +EAL LF M+ ++ + TM + AC GA ++
Sbjct: 379 --------------YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
IH + K G R V N L+DMY++ G + A +F M +++++W++MI +
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 430 GYANSAMNLFHRMKEED-----------IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI 478
+ A+ L H+M+ + ++PN + + +L +C+ + +G+++ + I
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 479 NEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
++ +A +VD+Y + L+ + ++ + +P NVI W ++ A +HG
Sbjct: 545 -KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHG 597
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 198/448 (44%), Gaps = 40/448 (8%)
Query: 87 QLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKL 146
LLR RS + + Y + +G KAV+ + LG +IH K
Sbjct: 67 DLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKF 126
Query: 147 GFHSDPF-IQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL 205
G+ D + L+ +Y C VFD++S R+ V+WN +I C ++ L+
Sbjct: 127 GYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA 186
Query: 206 YEEMKTSDTKPDGVILCTVLSACGH---SGNLSYGKAIHEFIMDNGLALSAHLQSALVNM 262
+ M + +P L +V++AC + L GK +H + + G L S ++N
Sbjct: 187 FRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-----ELNSFIINT 241
Query: 263 YVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMI 322
V AM Y K G + ++ + +DLV W+ ++
Sbjct: 242 LV---AM------------------------YGKLGKLASSKVLLGSFGGRDLVTWNTVL 274
Query: 323 SGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNG-F 381
S +++Q EAL+ EM L + PD+ T+ S + AC+++ L + +H YA KNG
Sbjct: 275 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 334
Query: 382 GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHR 441
+ V +AL+DMY C ++ + VF+ M + + W++MI ++ + + A+ LF
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 442 MKEE-DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRA 500
M+E + N GV+ AC +G + + ++ + G+ ++D+Y R
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV-KRGLDRDRFVQNTLMDMYSRL 453
Query: 501 NLLRKAMELIESMPFAPNVIIWGSLMSA 528
+ AM + M +++ W ++++
Sbjct: 454 GKIDIAMRIFGKME-DRDLVTWNTMITG 480
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 150/352 (42%), Gaps = 37/352 (10%)
Query: 181 RDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAI 240
R W ++ +S + + Y +M KPD +L A ++ GK I
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 241 HEFIMDNGLAL-SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGM 299
H + G + S + + LVN+Y CG +++D++S
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS------------------- 160
Query: 300 VKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISA 359
E++ V W+++IS ++ + AL+ F M N+ P T++S ++A
Sbjct: 161 ------------ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTA 208
Query: 360 CANVG---ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNV 416
C+N+ L + +H Y + G S +N L+ MY K G L +K + + +++
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 417 ISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSS 476
++W++++++ + A+ M E +EP+ VL ACSH ++ G++L +
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 477 MINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
+ + +VD+YC + + + M F + +W ++++
Sbjct: 328 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAG 378
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 121/240 (50%), Gaps = 9/240 (3%)
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
W ++ S+ +EA+ + +M + I PD + + A A++ + + IH +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 378 KNGFG-RSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAM 436
K G+G S++V N L+++Y KCG+ +VF+ + +N +SW+S+I++ A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 437 NLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH---YGCM 493
F M +E++EP+ + V+ ACS+ + E + ++ +G+ + +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE--GLMMGKQVHAYGLRKGELNSFIINTL 242
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA-CQVHGEVELGEFAAKQILE-LEPD 551
V +Y + L + L+ S +++ W +++S+ CQ +E E+ + +LE +EPD
Sbjct: 243 VAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 352 bits (903), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 312/591 (52%), Gaps = 37/591 (6%)
Query: 138 EIHGLASKLGFHSDPFIQTGLI--AMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
+IHGL K G +D + LI S + AR + DA +N ++ GY +
Sbjct: 23 QIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSE 82
Query: 196 SGN-YDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
S ++ V E M+ PD V+ A + +L G +H + +GL
Sbjct: 83 SDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLF 142
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTA------------------------- 289
+ + L+ MY CG ++ AR+++D++ +LV A
Sbjct: 143 VGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRN 202
Query: 290 ------MLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL 343
ML+GY K G ++ A+ IF ++ +D V WS MI G A + E+ F E+Q
Sbjct: 203 HTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQR 262
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR 403
+ P+++++ +SAC+ G+ + +H + +K G+ +SVNNALIDMY++CGN+
Sbjct: 263 AGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Query: 404 AKEVFENMPRKN-VISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACS 462
A+ VFE M K ++SW+SMI AMHG A+ LF+ M + P+G+ FI +L+ACS
Sbjct: 323 ARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACS 382
Query: 463 HAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIW 522
HAGL+EEG+ FS M + I P EHYGCMVDLY R+ L+KA + I MP P I+W
Sbjct: 383 HAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVW 442
Query: 523 GSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANK 582
+L+ AC HG +EL E +++ EL+P++ G LV+LSN YA +W DV IR+SM +
Sbjct: 443 RTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQ 502
Query: 583 GISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELK-LVSYTPSTSGXXXX 641
I K A S VE+ ++ F ++ E ++KL+E++ LK YTP +
Sbjct: 503 RIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYD 562
Query: 642 XXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
HSEKLAL +++ K + IRIVKNLRIC DCH+ MKL
Sbjct: 563 VEEEEKEDQVSKHSEKLAL-AFALARLSKGANIRIVKNLRICRDCHAVMKL 612
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 197/476 (41%), Gaps = 114/476 (23%)
Query: 77 IPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXX-XXXXXXXXXKAVSKASALYL 135
P PD N L+R S S P N++ ++ ++ R G KAV +L
Sbjct: 65 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSAC------RRIMD------------------- 170
G ++H A K G S F+ T LI MY C R++ D
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 171 ------ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDT---------- 214
AR +FDKM R+ +WN+M+ GY ++G + +++ EM D
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 215 ---------------------KPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
P+ V L VLSAC SG+ +GK +H F+ G +
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVS-TAMLSGYAKHGMVKDARFIFDQIVE 312
+ +AL++MY CG + +AR +++ + K +VS T+M++G A HG
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHG-------------- 350
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA--- 369
Q +EA++LFNEM + PD I+ +S + AC++ G + +
Sbjct: 351 -----------------QGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDY 393
Query: 370 -----RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMI 423
R H + +G ++D+Y + G L +A + MP I W +++
Sbjct: 394 FSEMKRVYHIEPEIEHYG-------CMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNG-VIFIGVLYACSHAGLVEEGQKLFSSMI 478
A + HG A + R+ E D +G ++ + YA AG ++ + SMI
Sbjct: 447 GACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYAT--AGKWKDVASIRKSMI 500
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+FS++P+ D + ++ ++ + + + +++L+R G A S++ +
Sbjct: 225 IFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGS 284
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSH-RDAVTWNIMID 191
G +HG K G+ + LI MYS C + ARLVF+ M R V+W MI
Sbjct: 285 FEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIA 344
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGK 238
G G ++ ++L+ EM PDG+ ++L AC H+G + G+
Sbjct: 345 GLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGE 391
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 348 bits (893), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 188/562 (33%), Positives = 307/562 (54%), Gaps = 43/562 (7%)
Query: 73 VFSQIPNPDTHF-CNQLLRLLSRSPTPQNTLFLYQKLRR-VGXXXXXXXXXXXXKAVSKA 130
+F Q P D F N +++ + ++ LY+ LR+ K+ S +
Sbjct: 32 LFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLS 91
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMI 190
+Y GL++H + GF +D ++ TG++ MY+ ++ AR FD+M HR V+W +I
Sbjct: 92 MCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALI 151
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
GY + G D KL+++M + + ++ N
Sbjct: 152 SGYIRCGELDLASKLFDQMP----------------------------HVKDVVIYN--- 180
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
A+++ +V G M AR L+D+++ K ++ T M+ GY + AR +FD +
Sbjct: 181 -------AMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQ-LRNIVPDQITMLSAISACANVGALAQA 369
E++LV W+ MI GY ++ QPQE ++LF EMQ ++ PD +T+LS + A ++ GAL+
Sbjct: 234 PERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG 293
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
W H + + + + V A++DMY+KCG + +AK +F+ MP K V SW++MI+ +A++
Sbjct: 294 EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALN 353
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
G A +A++LF M E+ +P+ + + V+ AC+H GLVEEG+K F M E G+ + EH
Sbjct: 354 GNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEH 411
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
YGCMVDL RA L++A +LI +MPF PN II S +SAC + ++E E K+ +ELE
Sbjct: 412 YGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELE 471
Query: 550 PDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYH 609
P +DG V+L N+YA ++RW+D G+++ M KE S +EIN V F+ D H
Sbjct: 472 PQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTH 531
Query: 610 KQSREIYKKLEEVVSELKLVSY 631
R I+ L +++ + Y
Sbjct: 532 PHRRSIHLVLGDLLMHMNEEKY 553
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 25/292 (8%)
Query: 278 KLSSKHLVVSTAMLS-GYAKHGMVKDARFIFDQIVEKDLVCWS-AMISGYAESDQPQEAL 335
++ +K LV+S + + GYA R +FDQ ++D S +MI Y E+ Q ++
Sbjct: 11 QIFTKFLVISASAVGIGYA--------RKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSF 62
Query: 336 KLFNEMQLRN-IVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDM 394
L+ +++ PD T + +C+ + Q +H+ + GF + V+ ++DM
Sbjct: 63 ALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDM 122
Query: 395 YAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE-EDIEPNGVI 453
YAK G + A+ F+ MP ++ +SW+++I+ + G + A LF +M +D+ VI
Sbjct: 123 YAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV----VI 178
Query: 454 FIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
+ ++ +G + ++LF M ++ I + M+ YC + A +L ++M
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEMTHKTVIT-----WTTMIHGYCNIKDIDAARKLFDAM 233
Query: 514 PFAPNVIIWGSLMSA-CQVHGEVE-LGEFAAKQ-ILELEPDHDGALVVLSNI 562
P N++ W +++ CQ E + F Q L+PD L VL I
Sbjct: 234 P-ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAI 284
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 348 bits (892), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 195/575 (33%), Positives = 307/575 (53%), Gaps = 53/575 (9%)
Query: 138 EIHGLASKLGFHSDP---FIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
++H + + +P F+ ++ + S+ + A VFD + + + WN +I
Sbjct: 66 QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACA 125
Query: 195 QS-GNYDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
++ LY +M + ++ PD VL AC + S GK +H I+ +G
Sbjct: 126 HDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGD 185
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
++ + L+++Y +CG +DLAR+ +FD++ E
Sbjct: 186 VYVNNGLIHLYGSCGCLDLARK-------------------------------VFDEMPE 214
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
+ LV W++MI + AL+LF EMQ R+ PD TM S +SACA +G+L+ W
Sbjct: 215 RSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWA 273
Query: 373 HTYADKN---GFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
H + + + V N+LI+MY KCG+L A++VF+ M ++++ SW++MI FA H
Sbjct: 274 HAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATH 333
Query: 430 GYANSAMNLFHRM--KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
G A AMN F RM K E++ PN V F+G+L AC+H G V +G++ F M+ ++ I P
Sbjct: 334 GRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPAL 393
Query: 488 EHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG-EVELGEFAAKQIL 546
EHYGC+VDL RA + +A++++ SMP P+ +IW SL+ AC G VEL E A+ I+
Sbjct: 394 EHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNII 453
Query: 547 ELEPDHD-------GALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEV 599
+ D++ GA V+LS +YA RWNDVG++R+ M+ GI KE S +EIN
Sbjct: 454 GTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGIS 513
Query: 600 HVFMMADRYHKQSREIYKKLEEVVSELKLVSYTP--STSGXXXXXXXXXXXXXXXWHSEK 657
H F D H Q+++IY++L+ + L+ + Y P S + HSE+
Sbjct: 514 HEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSER 573
Query: 658 LALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
LA+ +GLI+ ++ IRI KNLR+C DCH KL
Sbjct: 574 LAIAFGLIN-LPPQTPIRIFKNLRVCNDCHEVTKL 607
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 182/407 (44%), Gaps = 38/407 (9%)
Query: 32 QLKQIHAQILRSN-PSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLR 90
QLKQ+HA LR+ P VF I N + N L+R
Sbjct: 63 QLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIR 122
Query: 91 LLSRSPTPQNTLF-LYQK-LRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGF 148
+ + + F LY+K L R KA + G ++H K GF
Sbjct: 123 ACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGF 182
Query: 149 HSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEE 208
D ++ GLI +Y +C + AR VFD+M R V+WN MID + G YD L+L+ E
Sbjct: 183 GGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFRE 242
Query: 209 MKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM---DNGLALSAHLQSALVNMYVN 265
M+ S +PDG + +VLSAC G+LS G H F++ D +A+ ++++L+ MY
Sbjct: 243 MQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCK 301
Query: 266 CGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGY 325
CG++ +A +++ + + L AM+ G+A HG ++A FD++V+K
Sbjct: 302 CGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR----------- 350
Query: 326 AESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR-WIHTYADKNGFGRS 384
N+ P+ +T + + AC + G + + R + +
Sbjct: 351 ------------------ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPA 392
Query: 385 LSVNNALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMHG 430
L ++D+ A+ G + A ++ +MP K + + W S+++A G
Sbjct: 393 LEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/557 (35%), Positives = 293/557 (52%), Gaps = 34/557 (6%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
+IH + + GF + T L+ + AR VFD+M WN + GY ++
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 198 NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
+ L LY++M+ +PD V+ A G+ S G A+H ++ G + +
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC 317
LV MY+ K G + A F+F+ + KDLV
Sbjct: 149 ELVMMYM-------------------------------KFGELSSAEFLFESMQVKDLVA 177
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
W+A ++ ++ AL+ FN+M + D T++S +SAC +G+L I+ A
Sbjct: 178 WNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRAR 237
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
K ++ V NA +DM+ KCGN A+ +FE M ++NV+SWS+MI +AM+G + A+
Sbjct: 238 KEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALT 297
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI--NEHGIAPRHEHYGCMVD 495
LF M+ E + PN V F+GVL ACSHAGLV EG++ FS M+ N+ + PR EHY CMVD
Sbjct: 298 LFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVD 357
Query: 496 LYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGA 555
L R+ LL +A E I+ MP P+ IWG+L+ AC VH ++ LG+ A ++E PD
Sbjct: 358 LLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSY 417
Query: 556 LVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREI 615
V+LSNIYA +W+ V +R M G K A S VE ++H F D+ H QS+ I
Sbjct: 418 HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAI 477
Query: 616 YKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIR 675
Y+KL+E++ +++ + Y P T HSEKLA+ +GLI K R IR
Sbjct: 478 YEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLI-KGRPGHPIR 536
Query: 676 IVKNLRICEDCHSFMKL 692
++KNLR C+DCH+F K
Sbjct: 537 VMKNLRTCDDCHAFSKF 553
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 174/403 (43%), Gaps = 39/403 (9%)
Query: 32 QLKQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLRL 91
QLK+IHA +LR+ S VF ++ P N L +
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQ--VFDEMHKPRIFLWNTLFKG 83
Query: 92 LSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSD 151
R+ P +L LY+K+R +G KA+S+ G +H K GF
Sbjct: 84 YVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCL 143
Query: 152 PFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKT 211
+ T L+ MY + A +F+ M +D V WN + Q+GN L+ + +M
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 212 SDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDL 271
+ D + ++LSACG G+L G+ I++ + + +++A ++M++ CG +
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 272 ARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQP 331
AR L++++ +++V + M+ GYA +G D+R
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNG---DSR--------------------------- 293
Query: 332 QEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYA----DKNGFGRSLSV 387
EAL LF MQ + P+ +T L +SAC++ G + + + + DKN R
Sbjct: 294 -EALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHY 352
Query: 388 NNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMH 429
++D+ + G L A E + MP + W +++ A A+H
Sbjct: 353 -ACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 368 QARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFA 427
Q + IH + GF S+ L++ G++ A++VF+ M + + W+++ +
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 428 MHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
+ ++ L+ +M++ + P+ + V+ A S G G L + ++ ++G
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV-KYG----- 139
Query: 488 EHYGC-------MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
+GC +V +Y + L A L ESM +++ W + ++ C G
Sbjct: 140 --FGCLGIVATELVMMYMKFGELSSAEFLFESMQ-VKDLVAWNAFLAVCVQTG 189
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/536 (35%), Positives = 302/536 (56%), Gaps = 10/536 (1%)
Query: 158 LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPD 217
LI + R+M+A +FD++ D ++NIM+ Y ++ N+++ ++ M D
Sbjct: 99 LIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAAS- 157
Query: 218 GVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYD 277
T+++ G + + + +M+ +A+++ Y+ CG ++ A +
Sbjct: 158 ---WNTMITGYARRGEMEKARELFYSMMEKNEVS----WNAMISGYIECGDLEKASHFFK 210
Query: 278 KLSSKHLVVSTAMLSGYAKHGMVKDARFIF-DQIVEKDLVCWSAMISGYAESDQPQEALK 336
+ +V TAM++GY K V+ A +F D V K+LV W+AMISGY E+ +P++ LK
Sbjct: 211 VAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLK 270
Query: 337 LFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYA 396
LF M I P+ + SA+ C+ + AL R IH K+ ++ +LI MY
Sbjct: 271 LFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYC 330
Query: 397 KCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIG 456
KCG L A ++FE M +K+V++W++MI+ +A HG A+ A+ LF M + I P+ + F+
Sbjct: 331 KCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVA 390
Query: 457 VLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFA 516
VL AC+HAGLV G F SM+ ++ + P+ +HY CMVDL RA L +A++LI SMPF
Sbjct: 391 VLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Query: 517 PNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIR 576
P+ ++G+L+ AC+VH VEL EFAA+++L+L + V L+NIYA + RW DV +R
Sbjct: 451 PHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVR 510
Query: 577 QSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTS 636
+ M + K S +EI N+VH F +DR H + I+KKL+E+ ++KL Y P
Sbjct: 511 KRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELE 570
Query: 637 GXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
WHSEKLA+ +G I K + S I++ KNLRIC DCH +K
Sbjct: 571 FALHNVEEEQKEKLLLWHSEKLAVAFGCI-KLPQGSQIQVFKNLRICGDCHKAIKF 625
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 122/255 (47%), Gaps = 5/255 (1%)
Query: 98 PQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTG 157
P++ L L++ + G S+ SAL LG +IH + SK +D T
Sbjct: 265 PEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS 324
Query: 158 LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPD 217
LI+MY C + DA +F+ M +D V WN MI GY Q GN D+ L L+ EM + +PD
Sbjct: 325 LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD 384
Query: 218 GVILCTVLSACGHSGNLSYGKAIHE-FIMDNGLALSAHLQSALVNMYVNCGAMDLARELY 276
+ VL AC H+G ++ G A E + D + + +V++ G ++ A +L
Sbjct: 385 WITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLI 444
Query: 277 DKLSSK-HLVVSTAMLSGYAKHGMVKDARFIFDQIVE---KDLVCWSAMISGYAESDQPQ 332
+ + H V +L H V+ A F +++++ ++ + + + YA ++ +
Sbjct: 445 RSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWE 504
Query: 333 EALKLFNEMQLRNIV 347
+ ++ M+ N+V
Sbjct: 505 DVARVRKRMKESNVV 519
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 161/354 (45%), Gaps = 22/354 (6%)
Query: 214 TKP---DGVI-LCTVLSACGHSGNLSYG-KAIHEFIMDNGLALSAHLQSALVNMYVNCGA 268
TKP D + L +++ C SG++ + H N + + S L+ + +
Sbjct: 53 TKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWN----SLLIGISKDPSR 108
Query: 269 MDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAES 328
M A +L+D++ MLS Y ++ + A+ FD++ KD W+ MI+GYA
Sbjct: 109 MMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARR 168
Query: 329 DQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVN 388
+ ++A +LF M +N +++ + IS G L +A A G +
Sbjct: 169 GEMEKARELFYSMMEKN----EVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAW 220
Query: 389 NALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDI 447
A+I Y K + A+ +F++M KN+++W++MI+ + + + LF M EE I
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 448 EPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAM 507
PN L CS ++ G+++ ++++ + ++ +YC+ L A
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQI-HQIVSKSTLCNDVTALTSLISMYCKCGELGDAW 339
Query: 508 ELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILE--LEPDHDGALVVL 559
+L E M +V+ W +++S HG + +++++ + PD + VL
Sbjct: 340 KLFEVMK-KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVL 392
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 176/530 (33%), Positives = 291/530 (54%), Gaps = 34/530 (6%)
Query: 101 TLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIA 160
+ Y+ +RR G KAV K + H K G SDPF++ LI+
Sbjct: 88 SFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLIS 146
Query: 161 MYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVI 220
YS+ A +FD +D VTW MIDG+ ++G+ + + + EMK + + +
Sbjct: 147 GYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMT 206
Query: 221 LCTVLSACGHSGNLSYGKAIHEFIMDNG-LALSAHLQSALVNMYVNCGAMDLARELYDKL 279
+ +VL A G ++ +G+++H ++ G + + S+LV+MY C D
Sbjct: 207 VVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYD--------- 257
Query: 280 SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFN 339
DA+ +FD++ +++V W+A+I+GY +S + + +F
Sbjct: 258 ----------------------DAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFE 295
Query: 340 EMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCG 399
EM ++ P++ T+ S +SACA+VGAL + R +H Y KN + + LID+Y KCG
Sbjct: 296 EMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCG 355
Query: 400 NLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLY 459
L A VFE + KNV +W++MIN FA HGYA A +LF+ M + PN V F+ VL
Sbjct: 356 CLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLS 415
Query: 460 ACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNV 519
AC+H GLVEEG++LF SM + P+ +HY CMVDL+ R LL +A LIE MP P
Sbjct: 416 ACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTN 475
Query: 520 IIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSM 579
++WG+L +C +H + ELG++AA ++++L+P H G +L+N+Y++ + W++V +R+ M
Sbjct: 476 VVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQM 535
Query: 580 ANKGISKEKASSRVEINNEVHVFM-MADRYHKQSREIYKKLEEVVSELKL 628
++ + K S +E+ ++ F+ D+ +S ++YK L+ V +++L
Sbjct: 536 KDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 197/697 (28%), Positives = 333/697 (47%), Gaps = 71/697 (10%)
Query: 32 QLKQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLRL 91
Q KQ+HAQ +R+ +F + +P ++R
Sbjct: 23 QAKQLHAQFIRTQS---LSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRC 79
Query: 92 LSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSD 151
+ L + ++R G K+ + L G +HG +LG D
Sbjct: 80 FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139
Query: 152 PFIQTGLIAMYS---------ACRRIMD---------------------------ARLVF 175
+ L+ MY+ + + D R VF
Sbjct: 140 LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF 199
Query: 176 DKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLS 235
+ M +D V++N +I GY QSG Y+ L++ EM T+D KPD L +VL ++
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVI 259
Query: 236 YGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYA 295
GK IH +++ G+ ++ S+LV+MY A
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMY-------------------------------A 288
Query: 296 KHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLS 355
K ++D+ +F ++ +D + W+++++GY ++ + EAL+LF +M + P + S
Sbjct: 289 KSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSS 348
Query: 356 AISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKN 415
I ACA++ L + +H Y + GFG ++ + +AL+DMY+KCGN+ A+++F+ M +
Sbjct: 349 VIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLD 408
Query: 416 VISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFS 475
+SW+++I A+HG+ + A++LF MK + ++PN V F+ VL ACSH GLV+E F+
Sbjct: 409 EVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFN 468
Query: 476 SMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEV 535
SM +G+ EHY + DL RA L +A I M P +W +L+S+C VH +
Sbjct: 469 SMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNL 528
Query: 536 ELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEI 595
EL E A++I ++ ++ GA V++ N+YA RW ++ +R M KG+ K+ A S +E+
Sbjct: 529 ELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEM 588
Query: 596 NNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHS 655
N+ H F+ DR H +I + L+ V+ +++ Y TSG HS
Sbjct: 589 KNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHS 648
Query: 656 EKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
E+LA+ +G+I+ + IR+ KN+RIC DCH +K
Sbjct: 649 ERLAVAFGIINT-EPGTTIRVTKNIRICTDCHVAIKF 684
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 206/626 (32%), Positives = 320/626 (51%), Gaps = 37/626 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F +IP PDT N L+ + + + L++++R++G A
Sbjct: 96 LFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDR 153
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSH-RDAVTWNIMID 191
+ L ++H + GF S + + YS + +A VF M RD V+WN MI
Sbjct: 154 VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIV 213
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
Y Q + L LY+EM K D L +VL+A +L G+ H ++ G
Sbjct: 214 AYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ 273
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
++H+ S L++ Y CG D GM D+ +F +I+
Sbjct: 274 NSHVGSGLIDFYSKCGGCD---------------------------GMY-DSEKVFQEIL 305
Query: 312 EKDLVCWSAMISGYAESDQ-PQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR 370
DLV W+ MISGY+ +++ +EA+K F +MQ PD + + SAC+N+ + +Q +
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 371 WIHTYADKNGF-GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
IH A K+ +SVNNALI +Y K GNL A+ VF+ MP N +S++ MI +A H
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
G+ A+ L+ RM + I PN + F+ VL AC+H G V+EGQ+ F++M I P EH
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH 485
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
Y CM+DL RA L +A I++MP+ P + W +L+ AC+ H + L E AA +++ ++
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQ 545
Query: 550 PDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYH 609
P V+L+N+YA R+W ++ +R+SM K I K+ S +E+ + HVF+ D H
Sbjct: 546 PLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSH 605
Query: 610 KQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXW---HSEKLALCYGLIS 666
RE+ + LEE++ ++K V Y HSEKLA+ +GL+S
Sbjct: 606 PMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMS 665
Query: 667 KRRKESCIRIVKNLRICEDCHSFMKL 692
R E + +VKNLRIC DCH+ +K
Sbjct: 666 TRDGEELV-VVKNLRICGDCHNAIKF 690
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 209/469 (44%), Gaps = 60/469 (12%)
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L+ G +H L K S ++ + +YS C R+ AR F + ++N+++
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y + +L++E+ +PD V T++S + + + + G +
Sbjct: 84 YAKDSKIHIARQLFDEI----PQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 253 AHLQSALVNMYVNCGAMDLAREL--------YDKLSSKHLVVSTAMLSGYAKHGMVKDAR 304
S L+ C +DL ++L +D SS V+ A ++ Y+K G++++A
Sbjct: 140 GFTLSGLIA--ACCDRVDLIKQLHCFSVSGGFDSYSS----VNNAFVTYYSKGGLLREAV 193
Query: 305 FIFDQIVE-KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV 363
+F + E +D V W++MI Y + + +AL L+ EM + D T+ S ++A ++
Sbjct: 194 SVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSL 253
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCG---NLIRAKEVFENMPRKNVISWS 420
L R H K GF ++ V + LID Y+KCG + +++VF+ + +++ W+
Sbjct: 254 DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWN 313
Query: 421 SMINAFAMH-GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMIN 479
+MI+ ++M+ + A+ F +M+ P+ F+ V ACS+ + +++ I
Sbjct: 314 TMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIK 373
Query: 480 EHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP------------------------- 514
H + R ++ LY ++ L+ A + + MP
Sbjct: 374 SHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALL 433
Query: 515 ---------FAPNVIIWGSLMSACQVHGEVELGE---FAAKQILELEPD 551
APN I + +++SAC G+V+ G+ K+ ++EP+
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPE 482
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 156/321 (48%), Gaps = 10/321 (3%)
Query: 233 NLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLS 292
+L GK++H + + +A S +L + VN+Y CG + AR + ++ ++
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 293 GYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQIT 352
YAK + AR +FD+I + D V ++ +ISGYA++ + A+ LF M+ D T
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 353 MLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP 412
+ I+AC + L + +H ++ GF SVNNA + Y+K G L A VF M
Sbjct: 143 LSGLIAACCDRVDLIKQ--LHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 413 R-KNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQ 471
++ +SW+SMI A+ H A+ L+ M + + + VL A + + G+
Sbjct: 201 ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR 260
Query: 472 KLFSSMINEHGIAPRHEHYGCMVDLYCR---ANLLRKAMELIESMPFAPNVIIWGSLMSA 528
+ +I H G ++D Y + + + + ++ + + +P++++W +++S
Sbjct: 261 QFHGKLIKAGFHQNSHVGSG-LIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISG 318
Query: 529 CQVHGEVELGEFAAKQILELE 549
++ EL E A K +++
Sbjct: 319 YSMNE--ELSEEAVKSFRQMQ 337
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 341 bits (875), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 187/576 (32%), Positives = 316/576 (54%), Gaps = 17/576 (2%)
Query: 131 SALYLGLEIHGLASKLGFHSDP--FIQTGLIAMYSACRRIMDARLVFDK--MSHRDAVTW 186
S L G E+H + + G P ++ L Y++ ++ A+ +FD+ +S +D V W
Sbjct: 20 SFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDW 79
Query: 187 NIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMD 246
++ + + G +KL+ EM+ + D V + + C +L + + H +
Sbjct: 80 TTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVK 139
Query: 247 NGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFI 306
G+ S + +AL++MY CG + + ++++L K +V T +L K ++ R +
Sbjct: 140 MGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREV 199
Query: 307 FDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLR-NIVPDQITMLSAISACANVGA 365
F ++ E++ V W+ M++GY + +E L+L EM R + +T+ S +SACA G
Sbjct: 200 FHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGN 259
Query: 366 LAQARWIHTYADKNGF--GRSLS-----VNNALIDMYAKCGNLIRAKEVFENMPRKNVIS 418
L RW+H YA K G S V AL+DMYAKCGN+ + VF M ++NV++
Sbjct: 260 LVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVT 319
Query: 419 WSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI 478
W+++ + AMHG +++F +M E ++P+ + F VL ACSH+G+V+EG + F S+
Sbjct: 320 WNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL- 377
Query: 479 NEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELG 538
+G+ P+ +HY CMVDL RA L+ +A L+ MP PN ++ GSL+ +C VHG+VE+
Sbjct: 378 RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIA 437
Query: 539 EFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNE 598
E ++++++ P + +++SN+Y E R + +R S+ +GI K S + +N+
Sbjct: 438 ERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDS 497
Query: 599 VHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXW--HSE 656
VH F DR H +++EIY KL EV+ ++ Y P SG HSE
Sbjct: 498 VHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSE 557
Query: 657 KLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
KLA+C+GL+ + + + + + KNLRIC DCHS MK+
Sbjct: 558 KLAVCFGLL-ETKPSTPLLVFKNLRICRDCHSAMKI 592
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 158/380 (41%), Gaps = 75/380 (19%)
Query: 224 VLSACGHSGNLSYGKAIHEFIMDNGL--ALSAHLQSALVNMYVNCGAMDLARELYDK--L 279
+L C H L GK +H + +GL A ++L +AL Y + G M A++L+D+ L
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 280 SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFN 339
S K V T +LS ++++G++ + ++KLF
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVN-------------------------------SMKLFV 100
Query: 340 EMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCG 399
EM+ + + D ++++ CA + L A+ H A K G S+ V NAL+DMY KCG
Sbjct: 101 EMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCG 160
Query: 400 -------------------------------NLIRAKEVFENMPRKNVISWSSMINAFAM 428
L R +EVF MP +N ++W+ M+ +
Sbjct: 161 LVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLG 220
Query: 429 HGYANSAMNLFHRMKEEDIEP-NGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
G+ + L M N V +L AC+ +G + G+ + + + +
Sbjct: 221 AGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEE 280
Query: 488 EHYG------CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELG-EF 540
Y +VD+Y + + +M + M NV+ W +L S +HG+ + +
Sbjct: 281 ASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRMVIDM 339
Query: 541 AAKQILELEPDHDGALVVLS 560
+ I E++PD VLS
Sbjct: 340 FPQMIREVKPDDLTFTAVLS 359
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/561 (33%), Positives = 293/561 (52%), Gaps = 33/561 (5%)
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L L I+ K GF + ++ LI +Y+ C ++ AR VF+ M +D V+WN +I G
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISG 382
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y QSG+ + +KL++ M + + D + ++S +L +GK +H + +G+ +
Sbjct: 383 YIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID 442
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ +AL++MY AK G V D+ IF +
Sbjct: 443 LSVSNALIDMY-------------------------------AKCGEVGDSLKIFSSMGT 471
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
D V W+ +IS L++ +M+ +VPD T L + CA++ A + I
Sbjct: 472 GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEI 531
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H + G+ L + NALI+MY+KCG L + VFE M R++V++W+ MI A+ M+G
Sbjct: 532 HCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEG 591
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
A+ F M++ I P+ V+FI ++YACSH+GLV+EG F M + I P EHY C
Sbjct: 592 EKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYAC 651
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
+VDL R+ + KA E I++MP P+ IW S++ AC+ G++E E +++I+EL PD
Sbjct: 652 VVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDD 711
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQS 612
G ++ SN YA R+W+ V LIR+S+ +K I+K S +E+ VHVF D QS
Sbjct: 712 PGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQS 771
Query: 613 REIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXX-WHSEKLALCYGLISKRRKE 671
IYK LE + S + Y P HSE+LA+ +GL++
Sbjct: 772 EAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNT-EPG 830
Query: 672 SCIRIVKNLRICEDCHSFMKL 692
+ ++++KNLR+C DCH KL
Sbjct: 831 TPLQVMKNLRVCGDCHEVTKL 851
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 238/490 (48%), Gaps = 37/490 (7%)
Query: 73 VFSQI-PNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKAS 131
VF ++ P + + N ++R S++ L Y KLR KA +
Sbjct: 61 VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
+G ++ +GF SD F+ L+ MYS + AR VFD+M RD V+WN +I
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
GY G Y++ L++Y E+K S PD + +VL A G+ + G+ +H F + +G+
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ + LV MY+ K DAR +FD++
Sbjct: 241 VVVVNNGLVAMYL-------------------------------KFRRPTDARRVFDEMD 269
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
+D V ++ MI GY + + +E++++F E L PD +T+ S + AC ++ L+ A++
Sbjct: 270 VRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKY 328
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
I+ Y K GF +V N LID+YAKCG++I A++VF +M K+ +SW+S+I+ + G
Sbjct: 329 IYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGD 388
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
AM LF M + + + + ++ ++ + ++ G+ L S+ I + GI
Sbjct: 389 LMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI-KSGICIDLSVSN 447
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQIL--ELE 549
++D+Y + + ++++ SM + + W +++SAC G+ G Q+ E+
Sbjct: 448 ALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV 506
Query: 550 PDHDGALVVL 559
PD LV L
Sbjct: 507 PDMATFLVTL 516
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 209/439 (47%), Gaps = 37/439 (8%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMS-HRDA 183
+A+S +S L IH L LG S F LI YS R + VF ++S ++
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 184 VTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEF 243
WN +I + ++G + + L+ Y +++ S PD +V+ AC + G ++E
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 244 IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDA 303
I+D G + +ALV+MY ++ G++ A
Sbjct: 132 ILDMGFESDLFVGNALVDMY-------------------------------SRMGLLTRA 160
Query: 304 RFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV 363
R +FD++ +DLV W+++ISGY+ +EAL++++E++ IVPD T+ S + A N+
Sbjct: 161 RQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL 220
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMI 423
+ Q + +H +A K+G + VNN L+ MY K A+ VF+ M ++ +S+++MI
Sbjct: 221 LVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMI 280
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
+ ++ +F ++ +P+ + VL AC H + + +++ M+ + G
Sbjct: 281 CGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYML-KAGF 338
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEV--ELGEFA 541
++D+Y + + A ++ SM + + W S++S G++ + F
Sbjct: 339 VLESTVRNILIDVYAKCGDMITARDVFNSME-CKDTVSWNSIISGYIQSGDLMEAMKLFK 397
Query: 542 AKQILELEPDHDGALVVLS 560
I+E + DH L+++S
Sbjct: 398 MMMIMEEQADHITYLMLIS 416
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 141/329 (42%), Gaps = 39/329 (11%)
Query: 128 SKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWN 187
++ + L G +H K G D + LI MY+ C + D+ +F M D VTWN
Sbjct: 419 TRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWN 478
Query: 188 IMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN 247
+I + G++ L++ +M+ S+ PD L C GK IH ++
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 248 GLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIF 307
G + +AL+ MY CG ++ + +++++S + +V
Sbjct: 539 GYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT--------------------- 577
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVG--- 364
W+ MI Y + ++AL+ F +M+ IVPD + ++ I AC++ G
Sbjct: 578 ----------WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVD 627
Query: 365 -ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSM 422
LA + T+ + + ++D+ ++ + +A+E + MP K S W+S+
Sbjct: 628 EGLACFEKMKTHYKIDPMIEHYA---CVVDLLSRSQKISKAEEFIQAMPIKPDASIWASV 684
Query: 423 INAFAMHGYANSAMNLFHRMKEEDIEPNG 451
+ A G +A + R+ E + + G
Sbjct: 685 LRACRTSGDMETAERVSRRIIELNPDDPG 713
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 270/422 (63%), Gaps = 2/422 (0%)
Query: 203 LKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNM 262
+ +Y ++ KPD VL ++ +G+ IH ++ G S H+ + L+ M
Sbjct: 101 ITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQM 160
Query: 263 YVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI--VEKDLVCWSA 320
Y +CG + AR+++D++ K + V A+L+GY K G + +AR + + + ++ V W+
Sbjct: 161 YFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTC 220
Query: 321 MISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNG 380
+ISGYA+S + EA+++F M + N+ PD++T+L+ +SACA++G+L I +Y D G
Sbjct: 221 VISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRG 280
Query: 381 FGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFH 440
R++S+NNA+IDMYAK GN+ +A +VFE + +NV++W+++I A HG+ A+ +F+
Sbjct: 281 MNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFN 340
Query: 441 RMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRA 500
RM + + PN V FI +L ACSH G V+ G++LF+SM +++GI P EHYGCM+DL RA
Sbjct: 341 RMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRA 400
Query: 501 NLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLS 560
LR+A E+I+SMPF N IWGSL++A VH ++ELGE A ++++LEP++ G ++L+
Sbjct: 401 GKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLA 460
Query: 561 NIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLE 620
N+Y+ RW++ ++R M G+ K S +E+ N V+ F+ D H Q I++ L+
Sbjct: 461 NLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQ 520
Query: 621 EV 622
E+
Sbjct: 521 EM 522
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 176/395 (44%), Gaps = 69/395 (17%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQN---TLFLYQKLRRVGXXXXXXXXXXXXKAVSK 129
VF+ P P+T+ N ++R LS P + +Y+KL + K +
Sbjct: 69 VFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVR 128
Query: 130 ASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDA------ 183
S ++ G +IHG GF S + TGLI MY +C + DAR +FD+M +D
Sbjct: 129 VSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNAL 188
Query: 184 ---------------------------VTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKP 216
V+W +I GY +SG + +++++ M + +P
Sbjct: 189 LAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEP 248
Query: 217 DGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELY 276
D V L VLSAC G+L G+ I ++ G+ + L +A+++MY G + A +++
Sbjct: 249 DEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVF 308
Query: 277 DKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALK 336
+ ++ +++V T +++G A HG EAL
Sbjct: 309 ECVNERNVVTWTTIIAGLATHG-------------------------------HGAEALA 337
Query: 337 LFNEMQLRNIVPDQITMLSAISACANVGALAQA-RWIHTYADKNGFGRSLSVNNALIDMY 395
+FN M + P+ +T ++ +SAC++VG + R ++ K G ++ +ID+
Sbjct: 338 MFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLL 397
Query: 396 AKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMH 429
+ G L A EV ++MP K N W S++ A +H
Sbjct: 398 GRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH 432
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 38/251 (15%)
Query: 319 SAMISGYAESDQPQE---ALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTY 375
+ MI + D+P A+ ++ ++ PD T + V + R IH
Sbjct: 82 NTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQ 141
Query: 376 ADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNV------------------- 416
GF S+ V LI MY CG L A+++F+ M K+V
Sbjct: 142 VVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEA 201
Query: 417 --------------ISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACS 462
+SW+ +I+ +A G A+ A+ +F RM E++EP+ V + VL AC+
Sbjct: 202 RSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACA 261
Query: 463 HAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIW 522
G +E G+++ S ++ G+ ++D+Y ++ + KA+++ E + NV+ W
Sbjct: 262 DLGSLELGERI-CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTW 319
Query: 523 GSLMSACQVHG 533
++++ HG
Sbjct: 320 TTIIAGLATHG 330
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 189/594 (31%), Positives = 305/594 (51%), Gaps = 31/594 (5%)
Query: 99 QNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGL 158
+++L L +R G KA A +HG K + DP + GL
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 159 IAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDG 218
+ +Y+ + DA VF++M D V W+ MI +CQ+G ++ + L+ M+ + P+
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNE 348
Query: 219 VILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDK 278
L ++L+ C G+ +H ++ G L ++ +AL+++Y C MD A +L+ +
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE 408
Query: 279 LSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLF 338
LSS K+ V W+ +I GY + +A +F
Sbjct: 409 LSS-------------------------------KNEVSWNTVIVGYENLGEGGKAFSMF 437
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC 398
E + ++T SA+ ACA++ ++ +H A K + ++V+N+LIDMYAKC
Sbjct: 438 REALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKC 497
Query: 399 GNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVL 458
G++ A+ VF M +V SW+++I+ ++ HG A+ + MK+ D +PNG+ F+GVL
Sbjct: 498 GDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVL 557
Query: 459 YACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPN 518
CS+AGL+++GQ+ F SMI +HGI P EHY CMV L R+ L KAM+LIE +P+ P+
Sbjct: 558 SGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPS 617
Query: 519 VIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQS 578
V+IW +++SA E +A++IL++ P + V++SN+YA ++W +V IR+S
Sbjct: 618 VMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKS 677
Query: 579 MANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGX 638
M G+ KE S +E +VH F + H + I LE + + Y P +
Sbjct: 678 MKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAV 737
Query: 639 XXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
HSE+LAL YGL+ + I I+KNLRIC DCHS MK+
Sbjct: 738 LLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKV 791
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 178/365 (48%), Gaps = 14/365 (3%)
Query: 174 VFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGN 233
+ K S D NI+++ Y ++G L L++EM P+ + V A G++
Sbjct: 75 ILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM------PERNNVSFVTLAQGYACQ 128
Query: 234 LSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLS----SKHLVVSTA 289
G ++ + G L+ H+ ++ + ++V+ ++ L+ + + V A
Sbjct: 129 DPIG--LYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAA 186
Query: 290 MLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPD 349
+++ Y+ G V AR +F+ I+ KD+V W+ ++S Y E+ +++LKL + M++ +P+
Sbjct: 187 LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPN 246
Query: 350 QITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFE 409
T +A+ A +GA A+ +H K + V L+ +Y + G++ A +VF
Sbjct: 247 NYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFN 306
Query: 410 NMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEE 469
MP+ +V+ WS MI F +G+ N A++LF RM+E + PN +L C+
Sbjct: 307 EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGL 366
Query: 470 GQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSAC 529
G++L ++ + G ++D+Y + + A++L + + N + W +++
Sbjct: 367 GEQL-HGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS-SKNEVSWNTVIVGY 424
Query: 530 QVHGE 534
+ GE
Sbjct: 425 ENLGE 429
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 117/258 (45%), Gaps = 7/258 (2%)
Query: 274 ELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQE 333
++ K S L + +L+ Y K G KDA +FD++ E++ V + + GYA Q+
Sbjct: 74 DILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQD 129
Query: 334 ALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALID 393
+ L++ + + S + ++ W+H+ K G+ + V ALI+
Sbjct: 130 PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALIN 189
Query: 394 MYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVI 453
Y+ CG++ A+ VFE + K+++ W+ +++ + +GY ++ L M+ PN
Sbjct: 190 AYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYT 249
Query: 454 FIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
F L A G + + + ++ + G ++ LY + + A ++ M
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG-LLQLYTQLGDMSDAFKVFNEM 308
Query: 514 PFAPNVIIWGSLMSA-CQ 530
P +V+ W +++ CQ
Sbjct: 309 P-KNDVVPWSFMIARFCQ 325
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 190/570 (33%), Positives = 296/570 (51%), Gaps = 71/570 (12%)
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
LG+++HGL G + I+ L++MYS C R DA +F MS D VTWN MI GY
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYV 316
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
QSG ++ L + EM +S PD + ++L + NL Y K IH +IM + ++L
Sbjct: 317 QSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIF 376
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV--- 311
L SAL++ Y C + +A+ ++ + +S +VV TAM+SGY +G+ D+ +F +V
Sbjct: 377 LTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK 436
Query: 312 ----EKDLVC--------------------------------WSAMISGYAESDQPQEAL 335
E LV A+I YA+ + A
Sbjct: 437 ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAY 496
Query: 336 KLFNEMQLRNIVP-------------------------------DQITMLSAISACANVG 364
++F + R+IV D +++ +A+SACAN+
Sbjct: 497 EIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLP 556
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
+ + + IH + K+ + + LIDMYAKCGNL A VF+ M KN++SW+S+I
Sbjct: 557 SESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616
Query: 425 AFAMHGYANSAMNLFHRMKEED-IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
A HG ++ LFH M E+ I P+ + F+ ++ +C H G V+EG + F SM ++GI
Sbjct: 617 ACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAK 543
P+ EHY C+VDL+ RA L +A E ++SMPF P+ +WG+L+ AC++H VEL E A+
Sbjct: 677 QPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASS 736
Query: 544 QILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFM 603
++++L+P + G V++SN +A R W V +R M + + K S +EIN H+F+
Sbjct: 737 KLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFV 796
Query: 604 MADRYHKQSREIYKKLEEVVSELKLVSYTP 633
D H +S IY L ++ EL+L Y P
Sbjct: 797 SGDVNHPESSHIYSLLNSLLGELRLEGYIP 826
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 221/492 (44%), Gaps = 75/492 (15%)
Query: 143 ASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQV 202
S LG + F+ + LI Y +I +FD++ +D V WN+M++GY + G D V
Sbjct: 164 VSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV 223
Query: 203 LKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNM 262
+K + M+ P+ V VLS C + G +H ++ +G+ ++++L++M
Sbjct: 224 IKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSM 283
Query: 263 YVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK--------- 313
Y CG D A +L+ +S V M+SGY + G+++++ F +++
Sbjct: 284 YSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITF 343
Query: 314 ------------------------------DLVCWSAMISGYAESDQPQEALKLFNEMQL 343
D+ SA+I Y + A +F++
Sbjct: 344 SSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNS 403
Query: 344 RNIV-------------------------------PDQITMLSAISACANVGALAQARWI 372
++V P++IT++S + + AL R +
Sbjct: 404 VDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGREL 463
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H + K GF ++ A+IDMYAKCG + A E+FE + +++++SW+SMI A
Sbjct: 464 HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNP 523
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
++A+++F +M I + V L AC++ G+ + MI +H +A
Sbjct: 524 SAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI-KHSLASDVYSEST 582
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILE---LE 549
++D+Y + L+ AM + ++M N++ W S+++AC HG+++ +++E +
Sbjct: 583 LIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIR 641
Query: 550 PDHDGALVVLSN 561
PD L ++S+
Sbjct: 642 PDQITFLEIISS 653
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
AL LG E+HG K GF + I +I MY+ C R+ A +F+++S RD V+WN MI
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMIT 515
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
QS N + ++ +M S D V + LSAC + + S+GKAIH F++ + LA
Sbjct: 516 RCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLAS 575
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ +S L++MY CG + A ++ + K++V ++++ HG +KD+ +F ++V
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA-R 370
EK I PDQIT L IS+C +VG + + R
Sbjct: 636 EKS------------------------------GIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMH 429
+ + + G ++D++ + G L A E ++MP + W +++ A +H
Sbjct: 666 FFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLH 725
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 144/340 (42%), Gaps = 33/340 (9%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
+A S + L G ++H D + ++ MY+ C D +F ++ R +
Sbjct: 43 QACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSS 102
Query: 185 T--WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE 242
WN +I + ++G +Q L Y +M PD ++ AC N + +
Sbjct: 103 IRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSD 162
Query: 243 FIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKD 302
+ G+ + + S+L+ Y+ G +D+ +L+D++ K V+ ML+GYAK G +
Sbjct: 163 TVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL-- 220
Query: 303 ARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACAN 362
+K F+ M++ I P+ +T +S CA+
Sbjct: 221 -----------------------------DSVIKGFSVMRMDQISPNAVTFDCVLSVCAS 251
Query: 363 VGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSM 422
+ +H +G S+ N+L+ MY+KCG A ++F M R + ++W+ M
Sbjct: 252 KLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCM 311
Query: 423 INAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACS 462
I+ + G ++ F+ M + P+ + F +L + S
Sbjct: 312 ISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 75/147 (51%), Gaps = 6/147 (4%)
Query: 319 SAMISGYAESDQP-QEALKLFNEMQ-LRNIVPDQITMLSAISACANVGALAQARWIHTYA 376
S++ +A + P +++L L N + L +P ++++L + AC+N L Q + +H +
Sbjct: 4 SSVAKRFAPAIAPYKKSLPLRNSSRFLEETIPRRLSLL--LQACSNPNLLRQGKQVHAFL 61
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFE--NMPRKNVISWSSMINAFAMHGYANS 434
N + ++ MYA CG+ ++F ++ R ++ W+S+I++F +G N
Sbjct: 62 IVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQ 121
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYAC 461
A+ + +M + P+ F ++ AC
Sbjct: 122 ALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 279/476 (58%), Gaps = 5/476 (1%)
Query: 148 FHS-DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLY 206
FH D F+ LI + S + A VF +S+ + + MIDG+ SG + LY
Sbjct: 56 FHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLY 115
Query: 207 EEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNC 266
M + PD ++ +VL AC +L + IH ++ G S + ++ +Y
Sbjct: 116 HRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKS 171
Query: 267 GAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYA 326
G + A++++D++ + V +T M++ Y++ G +K+A +F + KD VCW+AMI G
Sbjct: 172 GELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLV 231
Query: 327 ESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLS 386
+ + +AL+LF EMQ+ N+ ++ T + +SAC+++GAL RW+H++ + S
Sbjct: 232 RNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNF 291
Query: 387 VNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEED 446
V NALI+MY++CG++ A+ VF M K+VIS+++MI+ AMHG + A+N F M
Sbjct: 292 VGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG 351
Query: 447 IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKA 506
PN V + +L ACSH GL++ G ++F+SM + P+ EHYGC+VDL R L +A
Sbjct: 352 FRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEA 411
Query: 507 MELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKE 566
IE++P P+ I+ G+L+SAC++HG +ELGE AK++ E E G V+LSN+YA
Sbjct: 412 YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASS 471
Query: 567 RRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEV 622
+W + IR+SM + GI KE S +E++N++H F++ D H IY++L+E+
Sbjct: 472 GKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 184/478 (38%), Gaps = 113/478 (23%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VFS + NP+ + ++ S + + LY ++ +V KA
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRM----IHNSVLPDNYVITSVLKACD 138
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----------- 181
L + EIH KLGF S + ++ +Y +++A+ +FD+M R
Sbjct: 139 LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINC 198
Query: 182 --------------------DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVIL 221
D V W MIDG ++ ++ L+L+ EM+ + +
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 222 CTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSS 281
VLSAC G L G+ +H F+ + + LS + +AL+NMY CG ++ AR ++ +
Sbjct: 259 VCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD 318
Query: 282 KHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEM 341
K ++ M+SG A HG EA+ F +M
Sbjct: 319 KDVISYNTMISGLAMHG-------------------------------ASVEAINEFRDM 347
Query: 342 QLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVN------NALIDMY 395
R P+Q+T+++ ++AC++ G L + N R +V ++D+
Sbjct: 348 VNRGFRPNQVTLVALLNACSHGGLLDIGLEVF-----NSMKRVFNVEPQIEHYGCIVDLL 402
Query: 396 AKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFI 455
+ G L A EN+P IEP+ ++
Sbjct: 403 GRVGRLEEAYRFIENIP----------------------------------IEPDHIMLG 428
Query: 456 GVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
+L AC G +E G+K+ + P Y + +LY + +++ E+ ESM
Sbjct: 429 TLLSACKIHGNMELGEKIAKRLFESEN--PDSGTYVLLSNLYASSGKWKESTEIRESM 484
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 104/246 (42%), Gaps = 50/246 (20%)
Query: 352 TMLSAISACANVGALA--QARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFE 409
T++S + +C N+ + A+ I T+ D++ F V LI + + ++ A +VF
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRTFHDQDAF-----VVFELIRVCSTLDSVDYAYDVFS 85
Query: 410 NMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACS------- 462
+ NV +++MI+ F G + ++L+HRM + P+ + VL AC
Sbjct: 86 YVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREI 145
Query: 463 HAGLVEEG------------------------QKLFSSMINEHGIAPRHEHYGC--MVDL 496
HA +++ G +K+F M P +H M++
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEM-------PDRDHVAATVMINC 198
Query: 497 YCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFAAKQILELEPDHDG 554
Y +++A+EL + + + + W +++ + E+ L F Q+ + +
Sbjct: 199 YSECGFIKEALELFQDVKI-KDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFT 257
Query: 555 ALVVLS 560
A+ VLS
Sbjct: 258 AVCVLS 263
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 293/561 (52%), Gaps = 35/561 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F+ +PN + LL ++ + + L+ + + G + + A
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L G ++H K +D ++ LI MY+ C + DAR VFD + D V +N MI+G
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425
Query: 193 YCQSGN---YDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGL 249
Y + G + L ++ +M+ +P + ++L A +L K IH + GL
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL 485
Query: 250 ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQ 309
L SAL+++Y NC + KD+R +FD+
Sbjct: 486 NLDIFAGSALIDVYSNCYCL-------------------------------KDSRLVFDE 514
Query: 310 IVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
+ KDLV W++M +GY + + +EAL LF E+QL PD+ T + ++A N+ ++
Sbjct: 515 MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG 574
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
+ H K G + + NAL+DMYAKCG+ A + F++ ++V+ W+S+I+++A H
Sbjct: 575 QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANH 634
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
G A+ + +M E IEPN + F+GVL ACSHAGLVE+G K F M+ GI P EH
Sbjct: 635 GEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEH 693
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
Y CMV L RA L KA ELIE MP P I+W SL+S C G VEL E AA+ + +
Sbjct: 694 YVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSD 753
Query: 550 PDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYH 609
P G+ +LSNIYA + W + +R+ M +G+ KE S + IN EVH+F+ D+ H
Sbjct: 754 PKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSH 813
Query: 610 KQSREIYKKLEEVVSELKLVS 630
++ +IY+ L++++ +++ VS
Sbjct: 814 CKANQIYEVLDDLLVQIRGVS 834
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 198/424 (46%), Gaps = 40/424 (9%)
Query: 134 YLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGY 193
++ ++ K GF D ++ T LI Y I ARLVFD + + VTW MI G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 194 CQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
+ G L+L+ ++ + PDG IL TVLSAC L GK IH I+ GL + A
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
L + L++ YV CG + A +L F+ + K
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKL-------------------------------FNGMPNK 313
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
+++ W+ ++SGY ++ +EA++LF M + PD S +++CA++ AL +H
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVH 373
Query: 374 TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA- 432
Y K G V N+LIDMYAKC L A++VF+ +V+ +++MI ++ G
Sbjct: 374 AYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQW 433
Query: 433 --NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEG-QKLFSSMINEHGIAPRHEH 489
+ A+N+F M+ I P+ + F+ +L A A L G K ++ ++G+
Sbjct: 434 ELHEALNIFRDMRFRLIRPSLLTFVSLLRA--SASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSAC--QVHGEVELGEFAAKQILE 547
++D+Y L+ + + + M +++IW S+ + Q E L F Q+
Sbjct: 492 GSALIDVYSNCYCLKDSRLVFDEMK-VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSR 550
Query: 548 LEPD 551
PD
Sbjct: 551 ERPD 554
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 188/392 (47%), Gaps = 34/392 (8%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGN 198
+HG G D ++ LI +YS ++ AR VF+KM R+ V+W+ M+ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 199 YDQVLKLYEEM-KTSDTKPDGVILCTVLSAC-GHSGNLSYGKAIHEFIMDNGLALSAHLQ 256
Y++ L ++ E +T P+ IL + + AC G G G + LQ
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR--------------GRWMVFQLQ 171
Query: 257 SALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV 316
S LV + R++Y V T ++ Y K G + AR +FD + EK V
Sbjct: 172 SFLVKSGFD-------RDVY---------VGTLLIDFYLKDGNIDYARLVFDALPEKSTV 215
Query: 317 CWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYA 376
W+ MISG + + +L+LF ++ N+VPD + + +SAC+ + L + IH +
Sbjct: 216 TWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHI 275
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAM 436
+ G S+ N LID Y KCG +I A ++F MP KN+ISW+++++ + + AM
Sbjct: 276 LRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAM 335
Query: 437 NLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDL 496
LF M + ++P+ +L +C+ + G ++ + I + + ++D+
Sbjct: 336 ELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN-LGNDSYVTNSLIDM 394
Query: 497 YCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
Y + + L A ++ + A +V+++ +++
Sbjct: 395 YAKCDCLTDARKVFDIFA-AADVVLFNAMIEG 425
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 161/326 (49%), Gaps = 44/326 (13%)
Query: 234 LSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSG 293
L Y +H I+ GL L +L + L+N+Y G M AR++++K+ ++LV + M+S
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 294 YAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM 353
HG+ +++ +F L W + R P++ +
Sbjct: 120 CNHHGIYEESLVVF-------LEFW-----------------------RTRKDSPNEYIL 149
Query: 354 LSAISACANVGALAQARW----IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFE 409
S I AC+ G + RW + ++ K+GF R + V LID Y K GN+ A+ VF+
Sbjct: 150 SSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFD 207
Query: 410 NMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEE 469
+P K+ ++W++MI+ G + ++ LF+++ E+++ P+G I VL ACS +E
Sbjct: 208 ALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEG 267
Query: 470 GQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSAC 529
G+++ + ++ +G+ ++D Y + + A +L MP N+I W +L+S
Sbjct: 268 GKQIHAHIL-RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSGY 325
Query: 530 Q---VHGE-VELGEFAAKQILELEPD 551
+ +H E +EL F + L+PD
Sbjct: 326 KQNALHKEAMEL--FTSMSKFGLKPD 349
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 335 bits (859), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 189/556 (33%), Positives = 298/556 (53%), Gaps = 35/556 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F +P L++ +++ + L++++R +G A S
Sbjct: 129 LFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGG 188
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
++ + LA KL F+ T L+ MY C + DAR +FD+M R+ VTWN+M++G
Sbjct: 189 IWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNG 248
Query: 193 YCQSG-------------------------------NYDQVLKLYEEMKTSDTKPDGVIL 221
Y ++G D+ L Y EM KP V++
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 222 CTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSS 281
+LSA S S G +H I+ G LQ+ +++ Y + LA + ++
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 282 KHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEM 341
H+ A+++G+ K+GMV+ AR +FDQ +KD+ W+AMISGYA+S PQ AL LF EM
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 428
Query: 342 -QLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGN 400
+ PD ITM+S SA +++G+L + + H Y + + + ++ A+IDMYAKCG+
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGS 488
Query: 401 LIRAKEVF---ENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGV 457
+ A +F +N+ + W+++I A HG+A A++L+ ++ I+PN + F+GV
Sbjct: 489 IETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGV 548
Query: 458 LYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAP 517
L AC HAGLVE G+ F SM ++HGI P +HYGCMVDL +A L +A E+I+ MP
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKA 608
Query: 518 NVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQ 577
+V+IWG L+SA + HG VE+ E AA ++ ++P H G V+LSN+YA RW DV L+R+
Sbjct: 609 DVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVRE 668
Query: 578 SMANKGISKEKASSRV 593
M + + +A S V
Sbjct: 669 EMRTRDVEWSRAFSGV 684
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 233/529 (44%), Gaps = 106/529 (20%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACR----------------------------- 166
G +IH K G S+ +I ++ MY+ CR
Sbjct: 60 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVR 119
Query: 167 --RIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTV 224
R+ DA +FD M R V++ +I GY Q+ + + ++L+ EM+ + V L TV
Sbjct: 120 SRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATV 179
Query: 225 LSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL 284
+SAC H G + + + + L + + L++MY C + AR+L+D++ ++L
Sbjct: 180 ISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL 239
Query: 285 VVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLR 344
V ML+GY+K G+++ A +FDQI EKD+V W MI G +Q EAL + EM
Sbjct: 240 VTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRC 299
Query: 345 NIVPDQITMLSAISACA-NVGA-------------------LAQARWIHTYADKNGFGRS 384
+ P ++ M+ +SA A +VG+ QA IH YA N +
Sbjct: 300 GMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLA 359
Query: 385 L-----------SVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYAN 433
L + NALI + K G + +A+EVF+ K++ SW++MI+ +A
Sbjct: 360 LQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQ 419
Query: 434 SAMNLFHRM-KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
A++LF M ++P+ + + V A S G +EEG++ +N I P
Sbjct: 420 LALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAH-DYLNFSTIPPNDNLTAA 478
Query: 493 MVDLYCRANLLRKAMEL-------------------------------------IESMPF 515
++D+Y + + A+ + ++S+P
Sbjct: 479 IIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPI 538
Query: 516 APNVIIWGSLMSACQVHGEVELGEF---AAKQILELEPD--HDGALVVL 559
PN I + ++SAC G VELG+ + K +EPD H G +V L
Sbjct: 539 KPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDL 587
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 140/249 (56%), Gaps = 3/249 (1%)
Query: 210 KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAM 269
++SDT+ L + L +C S +++ G+ IH ++ +GL + ++ ++++NMY C +
Sbjct: 36 ESSDTER---ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLL 92
Query: 270 DLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESD 329
A ++ + M+ GY + + DA +FD + E+ V ++ +I GYA+++
Sbjct: 93 ADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNN 152
Query: 330 QPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNN 389
Q EA++LF EM+ I+ +++T+ + ISAC+++G + R + + A K + V+
Sbjct: 153 QWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVST 212
Query: 390 ALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEP 449
L+ MY C L A+++F+ MP +N+++W+ M+N ++ G A LF ++ E+DI
Sbjct: 213 NLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVS 272
Query: 450 NGVIFIGVL 458
G + G L
Sbjct: 273 WGTMIDGCL 281
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 207/634 (32%), Positives = 327/634 (51%), Gaps = 21/634 (3%)
Query: 7 TMTHTPLPLPQLNHXXXXXXXX--XXXQLKQIHAQILRSNPSNXXXXXXXXXXXXXXXXX 64
T P+ QLNH Q KQ+ AQI+R N
Sbjct: 22 TTKWDPVQSLQLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYP 81
Query: 65 XXXXXXXXVFSQI-PNPDTHFCNQLLRLLSRSPTPQNTLF-LYQKLRRVGXXXXXXXXXX 122
+F PNP+ N ++ +S S +N F LY + R
Sbjct: 82 ENLDLAKLLFLNFTPNPNVFVYNTMISAVSSS---KNECFGLYSSMIRHRVSPDRQTFLY 138
Query: 123 XXKA---VSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMS 179
KA +S+ ++ + + G S LG ++ L+ Y A VF +M
Sbjct: 139 LMKASSFLSEVKQIHCHIIVSGCLS-LG----NYLWNSLVKFYMELGNFGVAEKVFARMP 193
Query: 180 HRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKA 239
H D ++N+MI GY + G + LKLY +M + +PD + ++L CGH ++ GK
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKG 253
Query: 240 IHEFIMDNGLALSAHL--QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKH 297
+H +I G S++L +AL++MY C LA+ +D + K + M+ G+ +
Sbjct: 254 VHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRL 313
Query: 298 GMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALK-LFNEMQL-RNIVPDQITMLS 355
G ++ A+ +FDQ+ ++DLV W++++ GY++ Q ++ LF EM + + PD++TM+S
Sbjct: 314 GDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVS 373
Query: 356 AISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKN 415
IS AN G L+ RW+H + +++ALIDMY KCG + RA VF+ K+
Sbjct: 374 LISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKD 433
Query: 416 VISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFS 475
V W+SMI A HG A+ LF RM+EE + PN V + VL ACSH+GLVEEG +F+
Sbjct: 434 VALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFN 493
Query: 476 SMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIE-SMPFAPNVIIWGSLMSACQVHGE 534
M ++ G P EHYG +VDL CRA + +A ++++ MP P+ +WGS++SAC+ +
Sbjct: 494 HMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGED 553
Query: 535 VELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVE 594
+E E A ++L+LEP+ +G V+LSNIYA RW R++M N+G+ K S V
Sbjct: 554 IETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVV 613
Query: 595 INNEVHVFMMADRY-HKQSREIYKKLEEVVSELK 627
+H F+ A++ H + EI + L+ + +E+K
Sbjct: 614 GVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 333 bits (854), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 288/527 (54%), Gaps = 36/527 (6%)
Query: 74 FSQIP--NPDTHFCNQLLRLLSRSPTP--QNTLFLYQKLRRVGXXXXXXXXXXXXKAVSK 129
F++IP + H N +L S+S T + L LY ++RR KA
Sbjct: 62 FNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVG 121
Query: 130 ASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIM 189
L G+ IHGLA K G D ++ L+ MY+ + A+ VFD++ R++V W ++
Sbjct: 122 LGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVL 181
Query: 190 IDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEF-IMDNG 248
+ GY + +V +L+ M+ + D + L ++ ACG+ GK +H I +
Sbjct: 182 MKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF 241
Query: 249 LALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFD 308
+ S +LQ+++++MYV C +D AR+L F+
Sbjct: 242 IDQSDYLQASIIDMYVKCRLLDNARKL-------------------------------FE 270
Query: 309 QIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQ 368
V++++V W+ +ISG+A+ ++ EA LF +M +I+P+Q T+ + + +C+++G+L
Sbjct: 271 TSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRH 330
Query: 369 ARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAM 428
+ +H Y +NG + IDMYA+CGN+ A+ VF+ MP +NVISWSSMINAF +
Sbjct: 331 GKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGI 390
Query: 429 HGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHE 488
+G A++ FH+MK +++ PN V F+ +L ACSH+G V+EG K F SM ++G+ P E
Sbjct: 391 NGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEE 450
Query: 489 HYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILEL 548
HY CMVDL RA + +A I++MP P WG+L+SAC++H EV+L A+++L +
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSM 510
Query: 549 EPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEI 595
EP+ V+LSNIYA W V +R+ M KG K S E+
Sbjct: 511 EPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 200/426 (46%), Gaps = 47/426 (11%)
Query: 73 VFSQIPNPDTHFCNQLLR-LLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKAS 131
VF +IP ++ L++ L S P+ L+ +R G KA
Sbjct: 166 VFDEIPVRNSVLWGVLMKGYLKYSKDPE-VFRLFCLMRDTGLALDALTLICLVKACGNVF 224
Query: 132 ALYLGLEIHGLASKLGF--HSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIM 189
A +G +HG++ + F SD ++Q +I MY CR + +AR +F+ R+ V W +
Sbjct: 225 AGKVGKCVHGVSIRRSFIDQSD-YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTL 283
Query: 190 IDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGL 249
I G+ + + L+ +M P+ L +L +C G+L +GK++H +++ NG+
Sbjct: 284 ISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI 343
Query: 250 ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQ 309
+ A ++ ++MY CG + +AR ++D + ++++ ++M++ + +G+
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLF--------- 394
Query: 310 IVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
+EAL F++M+ +N+VP+ +T +S +SAC++ G + +
Sbjct: 395 ----------------------EEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEG 432
Query: 370 RWIHTYADKNGFGRSLSVNN--ALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMINAF 426
W + +G + ++D+ + G + AK +NMP K + S W ++++A
Sbjct: 433 -WKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSAC 491
Query: 427 AMHGYANSAMNLFHRMKEEDIEPNGV-IFIGVLYACSHAGLVEEGQKLFSSMINEHGIAP 485
+H + A + ++ + E + V + + +YA AG+ E + + + + GI
Sbjct: 492 RIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYA--DAGMWE----MVNCVRRKMGIKG 545
Query: 486 RHEHYG 491
+H G
Sbjct: 546 YRKHVG 551
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 136/310 (43%), Gaps = 35/310 (11%)
Query: 221 LCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLS 280
L T+LS + L++ + +H ++ +G L S+L N Y+ +D A ++++
Sbjct: 10 LLTILS---QAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIP 66
Query: 281 SKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQP--QEALKLF 338
+++ W+ ++SGY++S + L L+
Sbjct: 67 CW-----------------------------KRNRHSWNTILSGYSKSKTCCYSDVLLLY 97
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC 398
N M+ D ++ AI AC +G L IH A KNG + V +L++MYA+
Sbjct: 98 NRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQL 157
Query: 399 GNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVL 458
G + A++VF+ +P +N + W ++ + + LF M++ + + + I ++
Sbjct: 158 GTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLV 217
Query: 459 YACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPN 518
AC + + G+ + I I ++D+Y + LL A +L E+ N
Sbjct: 218 KACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET-SVDRN 276
Query: 519 VIIWGSLMSA 528
V++W +L+S
Sbjct: 277 VVMWTTLISG 286
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 284/472 (60%), Gaps = 13/472 (2%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMD---ARLVFDKMSHRDAVTWNIMIDGYCQ 195
IHGL+ F+ T ++ C +I D A +F+++S+ + +N +I Y
Sbjct: 35 IHGLSQS------SFMVTKMVDF---CDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTH 85
Query: 196 SGNYDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
+ Y V+++Y+++ + S PD + +C G+ GK +H + G
Sbjct: 86 NSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVV 145
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
++AL++MY+ + A +++D++ + ++ ++LSGYA+ G +K A+ +F +++K
Sbjct: 146 TENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKT 205
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
+V W+AMISGY EA+ F EMQL I PD+I+++S + +CA +G+L +WIH
Sbjct: 206 IVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHL 265
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
YA++ GF + V NALI+MY+KCG + +A ++F M K+VISWS+MI+ +A HG A+
Sbjct: 266 YAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHG 325
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV 494
A+ F+ M+ ++PNG+ F+G+L ACSH G+ +EG + F M ++ I P+ EHYGC++
Sbjct: 326 AIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLI 385
Query: 495 DLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDG 554
D+ RA L +A+E+ ++MP P+ IWGSL+S+C+ G +++ A ++ELEP+ G
Sbjct: 386 DVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMG 445
Query: 555 ALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMAD 606
V+L+NIYA +W DV +R+ + N+ + K S +E+NN V F+ D
Sbjct: 446 NYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGD 497
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 178/423 (42%), Gaps = 66/423 (15%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLY-QKLRRVGXXXXXXXXXXXXKAVSKAS 131
+F+Q+ NP+ N ++R + + + + +Y Q LR+ K+ +
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLG 123
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWN---- 187
+ YLG ++HG K G + LI MY ++DA VFD+M RD ++WN
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 188 ---------------------------IMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVI 220
MI GY G Y + + + EM+ + +PD +
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 221 LCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLS 280
L +VL +C G+L GK IH + G + +AL+ MY CG + A +L+ ++
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 281 SKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNE 340
K ++ + M+SGYA HG A++ FNE
Sbjct: 304 GKDVISWSTMISGYAYHG-------------------------------NAHGAIETFNE 332
Query: 341 MQLRNIVPDQITMLSAISACANVGALAQA-RWIHTYADKNGFGRSLSVNNALIDMYAKCG 399
MQ + P+ IT L +SAC++VG + R+ + LID+ A+ G
Sbjct: 333 MQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAG 392
Query: 400 NLIRAKEVFENMPRK-NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNG-VIFIGV 457
L RA E+ + MP K + W S++++ G + A+ + E + E G + +
Sbjct: 393 KLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLAN 452
Query: 458 LYA 460
+YA
Sbjct: 453 IYA 455
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 194/693 (27%), Positives = 335/693 (48%), Gaps = 75/693 (10%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++P D N+++ + RS + + L+++++ G + S
Sbjct: 45 LFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEG 104
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
G +IHG +LG S+ + LI MYS ++ +R VF+ M R+ +WN ++
Sbjct: 105 FAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSS 164
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVI-------------------------------- 220
Y + G D + L +EM+ KPD V
Sbjct: 165 YTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPS 224
Query: 221 ---LCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYD 277
+ ++L A G+L GKAIH +I+ N L ++++ L++MY+ G + AR ++D
Sbjct: 225 TSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 284
Query: 278 KLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI----VEKDLVCWSAMISGYAESDQPQE 333
+ +K++V +++SG + ++KDA + ++ ++ D + W+++ SGYA +P++
Sbjct: 285 MMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344
Query: 334 ALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLS------- 386
AL + +M+ + + P+ ++ + S C+ G A + + G G + +
Sbjct: 345 ALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLK 404
Query: 387 ----------------------------VNNALIDMYAKCGNLIRAKEVFENMPRKNVIS 418
V AL+DMY K G+L A E+F + K++ S
Sbjct: 405 ILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLAS 464
Query: 419 WSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI 478
W+ M+ +AM G + F M E +EP+ + F VL C ++GLV+EG K F M
Sbjct: 465 WNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMR 524
Query: 479 NEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELG 538
+ +GI P EH CMVDL R+ L +A + I++M P+ IWG+ +S+C++H ++EL
Sbjct: 525 SRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELA 584
Query: 539 EFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNE 598
E A K++ LEP + +++ N+Y+ RW DV IR M N + + S ++I+
Sbjct: 585 EIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQT 644
Query: 599 VHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKL 658
VH+F + H +IY +L ++VSE+K Y P TS H+EKL
Sbjct: 645 VHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKL 704
Query: 659 ALCYGLISKRRKESCIRIVKNLRICEDCHSFMK 691
A+ YGLI K++ + IR+VKN IC D H+ K
Sbjct: 705 AMTYGLI-KKKGLAPIRVVKNTNICSDSHTVAK 736
Score = 179 bits (454), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 208/418 (49%), Gaps = 19/418 (4%)
Query: 134 YLGLEIHGLASKLGF-HSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+LGL IHG K G +SD + + + Y C + A +FD+M RD + WN ++
Sbjct: 4 FLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
+SGN+++ ++L+ EM+ S K + +L C + + G+ IH +++ GL +
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI-- 310
+ ++L+ MY G ++L+R++++ + ++L ++LS Y K G V DA + D++
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 311 --VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQ 368
++ D+V W++++SGYA ++A+ + MQ+ + P ++ S + A A G L
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 369 ARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAM 428
+ IH Y +N + V LIDMY K G L A+ VF+ M KN+++W+S+++ +
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 429 HGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHE 488
A L RM++E I+P+ + + + + G E+ + M E G+AP
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNVV 362
Query: 489 HYGCMVDLYCRANLLRKAMELIESMP---FAPNVIIWGSLM----------SACQVHG 533
+ + + R A+++ M PN +L+ S +VHG
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHG 420
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 279/512 (54%), Gaps = 37/512 (7%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N LL + P+ T+F Y+ G KA K S + G +IHG+ +K
Sbjct: 75 NTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTK 134
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL 205
+GF+ D ++Q L+ Y C +A VF +M RD V+W +I G+ ++G Y + L
Sbjct: 135 MGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDT 194
Query: 206 YEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVN 265
+ +M D +P+ VL + G G LS GK IH I+ +S +AL++MYV
Sbjct: 195 FSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVK 251
Query: 266 CGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGY 325
C ++LS DA +F ++ +KD V W++MISG
Sbjct: 252 C----------EQLS---------------------DAMRVFGELEKKDKVSWNSMISGL 280
Query: 326 AESDQPQEALKLFNEMQLRN-IVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS 384
++ +EA+ LF+ MQ + I PD + S +SACA++GA+ RW+H Y G
Sbjct: 281 VHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWD 340
Query: 385 LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE 444
+ A++DMYAKCG + A E+F + KNV +W++++ A+HG+ ++ F M +
Sbjct: 341 THIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVK 400
Query: 445 EDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMIN-EHGIAPRHEHYGCMVDLYCRANLL 503
+PN V F+ L AC H GLV+EG++ F M + E+ + P+ EHYGCM+DL CRA LL
Sbjct: 401 LGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLL 460
Query: 504 RKAMELIESMPFAPNVIIWGSLMSACQVHGEV-ELGEFAAKQILELEPDHDGALVVLSNI 562
+A+EL+++MP P+V I G+++SAC+ G + EL + L++E + G V+LSNI
Sbjct: 461 DEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNI 520
Query: 563 YAKERRWNDVGLIRQSMANKGISKEKASSRVE 594
+A RRW+DV IR+ M KGISK SS +E
Sbjct: 521 FAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 6/217 (2%)
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
++ ++S YA D+P+ + + PD T AC + + + IH
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
K GF + V N+L+ Y CG A +VF MP ++V+SW+ +I F G A++
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLY 497
F +M D+EPN ++ VL + G + G+ + ++ + E ++D+Y
Sbjct: 194 TFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISL-ETGNALIDMY 249
Query: 498 CRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE 534
+ L AM + + + + W S++S VH E
Sbjct: 250 VKCEQLSDAMRVFGELE-KKDKVSWNSMISGL-VHCE 284
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 294/558 (52%), Gaps = 37/558 (6%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
++H G+ + T LI + + R I L+F + D +N +I +
Sbjct: 27 QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLR 86
Query: 198 NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
+ Y M +S+ P +V+ +C L GK +H + +G L ++Q+
Sbjct: 87 LPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQA 146
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC 317
ALV Y CG M+ AR +FD++ EK +V
Sbjct: 147 ALVTFYSKCGDME-------------------------------GARQVFDRMPEKSIVA 175
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
W++++SG+ ++ EA+++F +M+ PD T +S +SACA GA++ W+H Y
Sbjct: 176 WNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII 235
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
G ++ + ALI++Y++CG++ +A+EVF+ M NV +W++MI+A+ HGY A+
Sbjct: 236 SEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVE 295
Query: 438 LFHRMKEE-DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDL 496
LF++M+++ PN V F+ VL AC+HAGLVEEG+ ++ M + + P EH+ CMVD+
Sbjct: 296 LFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDM 355
Query: 497 YCRANLLRKAMELIESMPF---APNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHD 553
RA L +A + I + A +W +++ AC++H +LG AK+++ LEPD+
Sbjct: 356 LGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNP 415
Query: 554 GALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSR 613
G V+LSNIYA + ++V IR M + K+ S +E+ N+ ++F M D H+++
Sbjct: 416 GHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETG 475
Query: 614 EIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESC 673
EIY+ LE ++S K + Y P + +HSEKLA+ +GL+ + +
Sbjct: 476 EIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLL--KTVDVA 533
Query: 674 IRIVKNLRICEDCHSFMK 691
I IVKNLRICEDCHS K
Sbjct: 534 ITIVKNLRICEDCHSAFK 551
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 189/397 (47%), Gaps = 38/397 (9%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F +P PD N +++ S+ P + + Y+++ K+ + SA
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L +G +H A GF D ++Q L+ YS C + AR VFD+M + V WN ++ G
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
+ Q+G D+ ++++ +M+ S +PD ++LSAC +G +S G +H++I+ GL L+
Sbjct: 183 FEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN 242
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
L +AL+N+Y CG + ARE++DK+ ++ TAM+S Y HG
Sbjct: 243 VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGY------------- 289
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLR-NIVPDQITMLSAISACANVGALAQARW 371
Q+A++LFN+M+ +P+ +T ++ +SACA+ G + + R
Sbjct: 290 ------------------GQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRS 331
Query: 372 IHTYADKN-GFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS----WSSMINAF 426
++ K+ + + ++DM + G L A + + + W++M+ A
Sbjct: 332 VYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGAC 391
Query: 427 AMHGYANSAMNLFHRMKE-EDIEPNGVIFIGVLYACS 462
MH + + + R+ E P + + +YA S
Sbjct: 392 KMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALS 428
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 186/596 (31%), Positives = 297/596 (49%), Gaps = 36/596 (6%)
Query: 100 NTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLI 159
L + ++RR G KAV+ G +IH LA K G D F+
Sbjct: 91 TALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAF 150
Query: 160 AMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGV 219
MY R DAR +FD++ R+ TWN I G + ++ + E + D P+ +
Sbjct: 151 DMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSI 210
Query: 220 ILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL 279
C L+AC +L+ G +H ++ +G + + L++ Y C
Sbjct: 211 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK------------ 258
Query: 280 SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFN 339
++ + IF ++ K+ V W ++++ Y ++ + ++A L+
Sbjct: 259 -------------------QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 340 EMQLRNIVPDQITMLSAI-SACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC 398
+ ++IV M+S++ SACA + L R IH +A K R++ V +AL+DMY KC
Sbjct: 300 RSR-KDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC 358
Query: 399 GNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDI--EPNGVIFIG 456
G + +++ F+ MP KN+++ +S+I +A G + A+ LF M PN + F+
Sbjct: 359 GCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVS 418
Query: 457 VLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFA 516
+L ACS AG VE G K+F SM + +GI P EHY C+VD+ RA ++ +A E I+ MP
Sbjct: 419 LLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQ 478
Query: 517 PNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIR 576
P + +WG+L +AC++HG+ +LG AA+ + +L+P G V+LSN +A RW + +R
Sbjct: 479 PTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVR 538
Query: 577 QSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTS 636
+ + GI K S + + N+VH F DR H ++EI L ++ +E++ Y P
Sbjct: 539 EELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLK 598
Query: 637 GXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
HSEKLAL +GL+S IRI KNLRIC DCHSF K
Sbjct: 599 LSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVP-IRITKNLRICGDCHSFFKF 653
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 183/411 (44%), Gaps = 36/411 (8%)
Query: 130 ASALYLGLEIHG-LASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNI 188
AS++ LG +H + L PF+ LI MYS ARLV R+ V+W
Sbjct: 19 ASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTS 78
Query: 189 MIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNG 248
+I G Q+G++ L + EM+ P+ A GK IH + G
Sbjct: 79 LISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG 138
Query: 249 LALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFD 308
+++++V C A D+ Y K + DAR +FD
Sbjct: 139 ---------RILDVFVGCSAFDM----------------------YCKTRLRDDARKLFD 167
Query: 309 QIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQ 368
+I E++L W+A IS +P+EA++ F E + + P+ IT + ++AC++ L
Sbjct: 168 EIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNL 227
Query: 369 ARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAM 428
+H ++GF +SV N LID Y KC + ++ +F M KN +SW S++ A+
Sbjct: 228 GMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ 287
Query: 429 HGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHE 488
+ A L+ R +++ +E + + VL AC+ +E G+ + + + R
Sbjct: 288 NHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK--ACVERTI 345
Query: 489 HYG-CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELG 538
G +VD+Y + + + + + MP N++ SL+ G+V++
Sbjct: 346 FVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMA 395
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 165/375 (44%), Gaps = 39/375 (10%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F +IP + N + P+ + + + RR+ A S
Sbjct: 165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH 224
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L LG+++HGL + GF +D + GLI Y C++I + ++F +M ++AV+W ++
Sbjct: 225 LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y Q+ ++ LY + + ++ +VLSAC L G++IH + + +
Sbjct: 285 YVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERT 344
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ SALV+MY CG ++ + + +D++ K+LV +++ GYA G V
Sbjct: 345 IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQV------------ 392
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI--VPDQITMLSAISACANVGALAQA- 369
AL LF EM R P+ +T +S +SAC+ GA+
Sbjct: 393 -------------------DMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGM 433
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMINAFAM 428
+ + G + ++DM + G + RA E + MP + IS W ++ NA M
Sbjct: 434 KIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRM 493
Query: 429 HGYAN----SAMNLF 439
HG +A NLF
Sbjct: 494 HGKPQLGLLAAENLF 508
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 7/283 (2%)
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKL-----SSKHLVVSTAMLSGYAKHGMVKDARF 305
LSA L+ ++ +M L R ++ ++ S ++ +++ Y+K + AR
Sbjct: 4 LSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARL 63
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA 365
+ +++V W+++ISG A++ AL F EM+ +VP+ T A A A++
Sbjct: 64 VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRL 123
Query: 366 LAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINA 425
+ IH A K G + V + DMY K A+++F+ +P +N+ +W++ I+
Sbjct: 124 PVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN 183
Query: 426 FAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAP 485
G A+ F + D PN + F L ACS + G +L ++ G
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQL-HGLVLRSGFDT 242
Query: 486 RHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
++D Y + +R + E+I + N + W SL++A
Sbjct: 243 DVSVCNGLIDFYGKCKQIRSS-EIIFTEMGTKNAVSWCSLVAA 284
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 183/600 (30%), Positives = 308/600 (51%), Gaps = 64/600 (10%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
+ S+ AL G ++H GF I L+ MY+ C ++DAR VFD+M +RD
Sbjct: 93 QVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLC 152
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDT--------------KPD-GVILCTVLSACG 229
+WN+M++GY + G ++ KL++EM D+ +P+ ++L +++
Sbjct: 153 SWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVP 212
Query: 230 HSGN-----------------LSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLA 272
+S + GK IH I+ GL L S+L++MY CG +D
Sbjct: 213 NSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCID-- 270
Query: 273 RELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQ 332
+AR IFD+IVEKD+V W++MI Y +S + +
Sbjct: 271 -----------------------------EARNIFDKIVEKDVVSWTSMIDRYFKSSRWR 301
Query: 333 EALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALI 392
E LF+E+ P++ T ++ACA++ + +H Y + GF +++L+
Sbjct: 302 EGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLV 361
Query: 393 DMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGV 452
DMY KCGN+ AK V + P+ +++SW+S+I A +G + A+ F + + +P+ V
Sbjct: 362 DMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHV 421
Query: 453 IFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIES 512
F+ VL AC+HAGLVE+G + F S+ +H ++ +HY C+VDL R+ + +I
Sbjct: 422 TFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISE 481
Query: 513 MPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDV 572
MP P+ +W S++ C +G ++L E AA+++ ++EP++ V ++NIYA +W +
Sbjct: 482 MPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEE 541
Query: 573 GLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYT 632
G +R+ M G++K SS EI + HVF+ AD H +I + L E+ ++K Y
Sbjct: 542 GKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYV 601
Query: 633 PSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
P+TS +HSEKLA+ + ++S + + I++ KNLR C DCH +K
Sbjct: 602 PATSLVLHDVEDEQKEENLVYHSEKLAVAFAILST-EEGTAIKVFKNLRSCVDCHGAIKF 660
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 219/433 (50%), Gaps = 19/433 (4%)
Query: 140 HGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNY 199
H A KL ++ L + +++ +R D + F +H D ++++ C++ +
Sbjct: 3 HSNARKLTTLHGFILKRNLSSFHASLKRFSDKK--FFNPNHEDG---GVVVERLCRANRF 57
Query: 200 DQVL------KLYEE---MKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
+ + KL E + KP C ++ C + L GK +HE I +G
Sbjct: 58 GEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFV 117
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+ + L+ MY CG++ AR+++D++ ++ L M++GYA+ G++++AR +FD++
Sbjct: 118 PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQ-LRNIVPDQITMLSAISACANVGALAQA 369
EKD W+AM++GY + DQP+EAL L++ MQ + N P+ T+ A++A A V + +
Sbjct: 178 TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRG 237
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
+ IH + + G + ++L+DMY KCG + A+ +F+ + K+V+SW+SMI+ +
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKS 297
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
+LF + PN F GVL AC+ E G+++ M G P
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFA 356
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFAAKQILE 547
+VD+Y + + A +++ P P+++ W SL+ C +G+ + L F
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Query: 548 LEPDHDGALVVLS 560
+PDH + VLS
Sbjct: 416 TKPDHVTFVNVLS 428
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 184/422 (43%), Gaps = 46/422 (10%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRV-GXXXXXXXXXXXXKAVSKAS 131
+F ++ D++ ++ + P+ L LY ++RV A +
Sbjct: 173 LFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVK 232
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
+ G EIHG + G SD + + L+ MY C I +AR +FDK+ +D V+W MID
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
Y +S + + L+ E+ S +P+ VL+AC GK +H ++ G
Sbjct: 293 RYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ S+LV+MY CG ++ A+ + D LV T+++ G A++G
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNG------------- 399
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA-R 370
QP EALK F+ + PD +T ++ +SAC + G + +
Sbjct: 400 ------------------QPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLE 441
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMH 429
+ ++ +K+ + L+D+ A+ G + K V MP K + W+S++ + +
Sbjct: 442 FFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTY 501
Query: 430 GYAN----SAMNLFHRMKEEDIEP-NGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
G + +A LF IEP N V ++ + + AG EE K+ M E G+
Sbjct: 502 GNIDLAEEAAQELFK------IEPENPVTYVTMANIYAAAGKWEEEGKMRKRM-QEIGVT 554
Query: 485 PR 486
R
Sbjct: 555 KR 556
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 290/535 (54%), Gaps = 33/535 (6%)
Query: 158 LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPD 217
LI Y +++AR VFD+M R TWN MI G Q ++ L L+ EM PD
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 218 GVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYD 277
L +V S ++S G+ IH + + GL L + S+L +MY+
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM------------- 137
Query: 278 KLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKL 337
++G ++D + + ++LV W+ +I G A++ P+ L L
Sbjct: 138 ------------------RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYL 179
Query: 338 FNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAK 397
+ M++ P++IT ++ +S+C+++ Q + IH A K G ++V ++LI MY+K
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 398 CGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEE-DIEPNGVIFIG 456
CG L A + F ++ + WSSMI+A+ HG + A+ LF+ M E+ ++E N V F+
Sbjct: 240 CGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLN 299
Query: 457 VLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFA 516
+LYACSH+GL ++G +LF M+ ++G P +HY C+VDL RA L +A +I SMP
Sbjct: 300 LLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIK 359
Query: 517 PNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIR 576
+++IW +L+SAC +H E+ + K+IL+++P+ V+L+N++A +RW DV +R
Sbjct: 360 TDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVR 419
Query: 577 QSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTS 636
+SM +K + KE S E EVH F M DR +S+EIY L+E+ E+KL Y P T+
Sbjct: 420 KSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTA 479
Query: 637 GXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMK 691
HSEKLA+ + L+ + + IRI+KNLR+C DCH K
Sbjct: 480 SVLHDMDEEEKESDLVQHSEKLAVAFALMI-LPEGAPIRIIKNLRVCSDCHVAFK 533
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 149/289 (51%), Gaps = 6/289 (2%)
Query: 260 VNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWS 319
++MY G A +Y ++ K+ + S +++GY + G + +AR +FD++ ++ L W+
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 320 AMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKN 379
AMI+G + + +E L LF EM PD+ T+ S S A + +++ + IH Y K
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 380 GFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLF 439
G L VN++L MY + G L + V +MP +N+++W+++I A +G + + L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 440 HRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCR 499
MK PN + F+ VL +CS + +GQ++ + I + G + ++ +Y +
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI-KIGASSVVAVVSSLISMYSK 239
Query: 500 ANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE----VELGEFAAKQ 544
L A + + ++W S++SA HG+ +EL A+Q
Sbjct: 240 CGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 287
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 209/690 (30%), Positives = 331/690 (47%), Gaps = 74/690 (10%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++ D N +++ + + Y ++ G K+V+ S+
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISS 145
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L G +IH + KLGF SD ++ LI++Y DA VF++M RD V+WN MI G
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y G+ L L++EM KPD + L AC H + GK IH + + +
Sbjct: 206 YLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 253 -AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ +++++MY G + A +++ + +++V M+ YA++G V DA F ++
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 312 EKD------------------------------------LVCWSAMISGYAESDQPQEA- 334
E++ +V +A+I Y E Q + A
Sbjct: 326 EQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAE 385
Query: 335 ------------------------------LKLFNEMQLRNIVPDQITMLSAISACANVG 364
L+LF E+ ++VPD T+ S + A A
Sbjct: 386 VIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESL 445
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
+L++ R IH Y K+ + + + N+L+ MYA CG+L A++ F ++ K+V+SW+S+I
Sbjct: 446 SLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIM 505
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
A+A+HG+ ++ LF M + PN F +L ACS +G+V+EG + F SM E+GI
Sbjct: 506 AYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGID 565
Query: 485 PRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQ 544
P EHYGCM+DL R A +E MPF P IWGSL++A + H ++ + EFAA+Q
Sbjct: 566 PGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQ 625
Query: 545 ILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMM 604
I ++E D+ G V+L N+YA+ RW DV I+ M +KGIS+ + S VE + HVF
Sbjct: 626 IFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTN 685
Query: 605 ADRYHKQSREIYKKLEEV---VSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALC 661
DR H + +IY+ L+ V V E + Y S HS +LA C
Sbjct: 686 GDRSHVATNKIYEVLDVVSRMVGEEDI--YVHCVSRLRPETLVKSRSNSPRRHSVRLATC 743
Query: 662 YGLISKRRKESCIRIVKNLRICEDCHSFMK 691
+GLIS + + N RIC CH F++
Sbjct: 744 FGLISTETGRR-VTVRNNTRICRKCHEFLE 772
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 198/462 (42%), Gaps = 91/462 (19%)
Query: 150 SDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEM 209
+DP + L ++ R + DA +FD+M+ DA WN+MI G+ G Y + ++ Y M
Sbjct: 63 NDPALTRALRG-FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM 121
Query: 210 KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAM 269
+ K D V+ + +L GK IH ++ G ++ ++L+++Y+ G
Sbjct: 122 VFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA 181
Query: 270 DLARELYDKLSSKHLVVSTAMLSGYAKHG---------------MVKDARF--------- 305
A ++++++ + +V +M+SGY G K RF
Sbjct: 182 WDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241
Query: 306 ----------------IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIV-- 347
+ +I D++ ++++ Y++ + A ++FN M RNIV
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAW 301
Query: 348 ------------------------------PDQITMLSAISACANVGALAQARWIHTYAD 377
PD IT ++ + A A+ + R IH YA
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAM 357
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
+ GF + + ALIDMY +CG L A+ +F+ M KNVISW+S+I A+ +G SA+
Sbjct: 358 RRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 417
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG------ 491
LF + + + P+ +L A + + + EG+++ H + ++
Sbjct: 418 LFQELWDSSLVPDSTTIASILPAYAESLSLSEGREI-------HAYIVKSRYWSNTIILN 470
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
+V +Y L A + + +V+ W S++ A VHG
Sbjct: 471 SLVHMYAMCGDLEDARKCFNHI-LLKDVVSWNSIIMAYAVHG 511
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 14/272 (5%)
Query: 288 TAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIV 347
T L G+A +++DA +FD++ + D W+ MI G+ EA++ ++ M +
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 348 PDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEV 407
D T I + A + +L + + IH K GF + V N+LI +Y K G A++V
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 408 FENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLV 467
FE MP ++++SW+SMI+ + G S++ LF M + +P+ + L ACSH
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 468 EEGQKLFSSMINEHGIAPRHEHYGCMV-----DLYCRANLLRKAMELIESMPFAPNVIIW 522
+ G++ I+ H + R E MV D+Y + + A + M N++ W
Sbjct: 248 KMGKE-----IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAW 301
Query: 523 GSLMSACQVHGEVELGEFAAKQILE---LEPD 551
++ +G V +++ E L+PD
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPD 333
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 328 bits (842), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 177/519 (34%), Positives = 287/519 (55%), Gaps = 33/519 (6%)
Query: 174 VFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGN 233
+F + +N MI GY ++++ L Y EM +PD +L AC +
Sbjct: 88 IFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKS 147
Query: 234 LSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSG 293
+ GK IH + GL +Q++L+NMY CG M+L+ +++KL SK ++M+S
Sbjct: 148 IREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA 207
Query: 294 YAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEM-QLRNIVPDQIT 352
A GM WS E L LF M N+ ++
Sbjct: 208 RAGMGM------------------WS-------------ECLLLFRGMCSETNLKAEESG 236
Query: 353 MLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP 412
M+SA+ ACAN GAL IH + +N ++ V +L+DMY KCG L +A +F+ M
Sbjct: 237 MVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME 296
Query: 413 RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQK 472
++N +++S+MI+ A+HG SA+ +F +M +E +EP+ V+++ VL ACSH+GLV+EG++
Sbjct: 297 KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRR 356
Query: 473 LFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVH 532
+F+ M+ E + P EHYGC+VDL RA LL +A+E I+S+P N +IW + +S C+V
Sbjct: 357 VFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVR 416
Query: 533 GEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSR 592
+ELG+ AA+++L+L + G +++SN+Y++ + W+DV R +A KG+ + S
Sbjct: 417 QNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSI 476
Query: 593 VEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXX 652
VE+ + H F+ DR H + +EIYK L ++ +LK Y+P +
Sbjct: 477 VELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLK 536
Query: 653 WHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMK 691
HS+K+A+ +GL+ S I+I +NLR+C DCH++ K
Sbjct: 537 GHSQKVAIAFGLLYT-PPGSIIKIARNLRMCSDCHTYTK 574
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 169/355 (47%), Gaps = 34/355 (9%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F I +P T N ++R + + L Y ++ + G KA ++ +
Sbjct: 88 IFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKS 147
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+ G +IHG KLG +D F+Q LI MY C + + VF+K+ + A +W+ M+
Sbjct: 148 IREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA 207
Query: 193 YCQSGNYDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
G + + L L+ M ++ K + + + L AC ++G L+ G +IH F++ N L
Sbjct: 208 RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL 267
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ +Q++LV+MYV CG +D A ++ K+ ++ + +AM+SG A HG
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHG------------- 314
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
+ + AL++F++M + PD + +S ++AC++ G + + R
Sbjct: 315 ------------------EGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRR 356
Query: 372 IHTYADKNGFGRSLSVN-NALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMIN 424
+ K G + + L+D+ + G L A E +++P KN + W + ++
Sbjct: 357 VFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/621 (30%), Positives = 302/621 (48%), Gaps = 33/621 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF Q+P D N L+ + L L + G A
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
G +HGL G + I L++MY + ++R V +M RD V WN +I G
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNL-SYGKAIHEFIMDNGLAL 251
Y + + D+ L ++ M+ + + + +VLSAC G+L GK +H +I+ G
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
H++++L+ MY CG + +++L F+ +
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDL-------------------------------FNGLD 509
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
++++ W+AM++ A +E LKL ++M+ + DQ + +SA A + L + +
Sbjct: 510 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 569
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
+H A K GF + NA DMY+KCG + ++ +++ SW+ +I+A HGY
Sbjct: 570 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 629
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
FH M E I+P V F+ +L ACSH GLV++G + + + G+ P EH
Sbjct: 630 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 689
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPD 551
C++DL R+ L +A I MP PN ++W SL+++C++HG ++ G AA+ + +LEP+
Sbjct: 690 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 749
Query: 552 HDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQ 611
D V+ SN++A RW DV +R+ M K I K++A S V++ ++V F + DR H Q
Sbjct: 750 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQ 809
Query: 612 SREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKE 671
+ EIY KLE++ +K Y TS HSE+LAL Y L+S +
Sbjct: 810 TMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMST-PEG 868
Query: 672 SCIRIVKNLRICEDCHSFMKL 692
S +RI KNLRIC DCHS K
Sbjct: 869 STVRIFKNLRICSDCHSVYKF 889
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 206/465 (44%), Gaps = 34/465 (7%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++P+ + L+ S P+ + +Y+ +R G +
Sbjct: 99 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 158
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
LG +I G K G S ++ LI+M + + A +FD+MS RD ++WN +
Sbjct: 159 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 218
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y Q+G+ ++ +++ M+ + + + T+LS GH + +G+ IH ++ G
Sbjct: 219 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG---- 274
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+D + + V +L YA G +A +F Q+
Sbjct: 275 -----------------------FDSV----VCVCNTLLRMYAGAGRSVEANLVFKQMPT 307
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
KDL+ W+++++ + + +AL L M + +T SA++AC + R +
Sbjct: 308 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 367
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H +G + + NAL+ MY K G + ++ V MPR++V++W+++I +A
Sbjct: 368 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDP 427
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAG-LVEEGQKLFSSMINEHGIAPRHEHYG 491
+ A+ F M+ E + N + + VL AC G L+E G+ L + +++ G
Sbjct: 428 DKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKN 486
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
++ +Y + L + +L + N+I W ++++A HG E
Sbjct: 487 SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGE 530
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 212/462 (45%), Gaps = 35/462 (7%)
Query: 104 LYQKLRRVGXXXXXXXXXXXXKAVSKASALYL-GLEIHGLASKLGFHSDPFIQTGLIAMY 162
++K+ +G A ++ +++ G+++HG +K G SD ++ T ++ +Y
Sbjct: 28 FFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLY 87
Query: 163 SACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILC 222
+ +R VF++M R+ V+W ++ GY G ++V+ +Y+ M+ + +
Sbjct: 88 GVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMS 147
Query: 223 TVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK 282
V+S+CG + S G+ I ++ +GL ++++L++M + G +D A
Sbjct: 148 LVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYAN--------- 198
Query: 283 HLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQ 342
+IFDQ+ E+D + W+++ + YA++ +E+ ++F+ M+
Sbjct: 199 ----------------------YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 343 LRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLI 402
+ + T+ + +S +V R IH K GF + V N L+ MYA G +
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 403 RAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACS 462
A VF+ MP K++ISW+S++ +F G + A+ L M N V F L AC
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356
Query: 463 HAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIW 522
E+G ++ ++ G+ +V +Y + + ++ ++ MP +V+ W
Sbjct: 357 TPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAW 414
Query: 523 GSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYA 564
+L+ E AA Q + +E + V+S + A
Sbjct: 415 NALIGG-YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 455
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 168/358 (46%), Gaps = 46/358 (12%)
Query: 178 MSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNL-SY 236
M R+ V+WN M+ G + G Y + ++ + +M KP ++ ++++ACG SG++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 237 GKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAK 296
G +H F+ +GL ++ +A++++Y G + +R++++++ +++V T+++ GY+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 297 HGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSA 356
G +P+E + ++ M+ + ++ +M
Sbjct: 121 KG-------------------------------EPEEVIDIYKGMRGEGVGCNENSMSLV 149
Query: 357 ISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNV 416
IS+C + + R I K+G L+V N+LI M GN+ A +F+ M ++
Sbjct: 150 ISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT 209
Query: 417 ISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSS 476
ISW+S+ A+A +G+ + +F M+ E N +L H + G+ +
Sbjct: 210 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI--- 266
Query: 477 MINEHGIAPR--HEHYGC----MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
HG+ + + C ++ +Y A +A + + MP ++I W SLM++
Sbjct: 267 ----HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMAS 319
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 281/531 (52%), Gaps = 43/531 (8%)
Query: 165 CR--RIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILC 222
CR R+ +ARL+FD+M R+ VTW MI GY Q+ D KL+E M P+
Sbjct: 183 CREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM------PEKT--- 233
Query: 223 TVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK 282
+S+ ++++ Y G ++ A E ++ + K
Sbjct: 234 ----------EVSW--------------------TSMLLGYTLSGRIEDAEEFFEVMPMK 263
Query: 283 HLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQ 342
++ AM+ G+ + G + AR +FD + ++D W MI Y EAL LF +MQ
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 343 LRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLI 402
+ + P +++S +S CA + +L R +H + + F + V + L+ MY KCG L+
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383
Query: 403 RAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACS 462
+AK VF+ K++I W+S+I+ +A HG A+ +FH M PN V I +L ACS
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Query: 463 HAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIW 522
+AG +EEG ++F SM ++ + P EHY C VD+ RA + KAMELIESM P+ +W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 523 GSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANK 582
G+L+ AC+ H ++L E AAK++ E EPD+ G V+LS+I A +W DV ++R++M
Sbjct: 504 GALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTN 563
Query: 583 GISKEKASSRVEINNEVHVFMMAD-RYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXX 641
+SK S +E+ +VH+F + H + I LE+ L+ Y+P S
Sbjct: 564 NVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHD 623
Query: 642 XXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
HSE+LA+ YGL+ K + IR++KNLR+C DCH+ +KL
Sbjct: 624 VDEEEKVDSLSRHSERLAVAYGLL-KLPEGVPIRVMKNLRVCGDCHAAIKL 673
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 210/474 (44%), Gaps = 70/474 (14%)
Query: 88 LLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXX--XXXXXKAVSKASALYLGLEIHGLASK 145
+LR + T N F +L R+G KA+ +++ G +GL +
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKE 66
Query: 146 LGFHSDPFIQ------TGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNY 199
D + GL++ Y R I++AR VF+ M R+ V+W M+ GY Q G
Sbjct: 67 ARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMV 126
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSAL 259
+ L+ M + + +M GL
Sbjct: 127 GEAESLFWRMPERN-------------------------EVSWTVMFGGL---------- 151
Query: 260 VNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWS 319
++ G +D AR+LYD + K +V ST M+ G + G V +AR IFD++ E+++V W+
Sbjct: 152 ----IDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWT 207
Query: 320 AMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKN 379
MI+GY ++++ A KLF M + +++ S + G + A
Sbjct: 208 TMITGYRQNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSGRIEDAEEFFEVMPM- 262
Query: 380 GFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLF 439
+ + NA+I + + G + +A+ VF+ M ++ +W MI A+ G+ A++LF
Sbjct: 263 ---KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLF 319
Query: 440 HRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI-----NEHGIAPRHEHYGCMV 494
+M+++ + P+ I +L C+ ++ G+++ + ++ ++ +A ++
Sbjct: 320 AQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVA------SVLM 373
Query: 495 DLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILEL 548
+Y + L KA +L+ + ++I+W S++S HG LGE A K E+
Sbjct: 374 TMYVKCGELVKA-KLVFDRFSSKDIIMWNSIISGYASHG---LGEEALKIFHEM 423
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 33/275 (12%)
Query: 157 GLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKP 216
+I + I AR VFD M RD TW MI Y + G + L L+ +M+ +P
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP 329
Query: 217 DGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELY 276
L ++LS C +L YG+ +H ++ ++ S L+ MYV CG + A+ ++
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVF 389
Query: 277 DKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALK 336
D+ SSK +++ +++SGYA HG+ +EALK
Sbjct: 390 DRFSSKDIIMWNSIISGYASHGL-------------------------------GEEALK 418
Query: 337 LFNEMQLRNIVPDQITMLSAISACANVGALAQARWI-HTYADKNGFGRSLSVNNALIDMY 395
+F+EM +P+++T+++ ++AC+ G L + I + K ++ + +DM
Sbjct: 419 IFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDML 478
Query: 396 AKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMH 429
+ G + +A E+ E+M K + W +++ A H
Sbjct: 479 GRAGQVDKAMELIESMTIKPDATVWGALLGACKTH 513
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 115/245 (46%), Gaps = 4/245 (1%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF + + D +++ R L L+ ++++ G + ++
Sbjct: 287 VFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLAS 346
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L G ++H + F D ++ + L+ MY C ++ A+LVFD+ S +D + WN +I G
Sbjct: 347 LQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISG 406
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y G ++ LK++ EM +S T P+ V L +L+AC ++G L G I E M++ ++
Sbjct: 407 YASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFES-MESKFCVT 465
Query: 253 AHLQ--SALVNMYVNCGAMDLARELYDKLSSK-HLVVSTAMLSGYAKHGMVKDARFIFDQ 309
++ S V+M G +D A EL + ++ K V A+L H + A +
Sbjct: 466 PTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKK 525
Query: 310 IVEKD 314
+ E +
Sbjct: 526 LFENE 530
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 146/313 (46%), Gaps = 38/313 (12%)
Query: 256 QSALVNMYVNC----------GAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
++ L + VNC G ++ AR+ +D L K + +++SGY +G+ K+AR
Sbjct: 10 RTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQ 69
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA 365
+FD++ E+++V W+ ++SGY ++ EA +F M RN+V M+ VG
Sbjct: 70 LFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV-SWTAMVKGYMQEGMVGE 128
Query: 366 LAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINA 425
W ++N ++ + D G + +A+++++ MP K+V++ ++MI
Sbjct: 129 AESLFW--RMPERNEVSWTVMFGGLIDD-----GRIDKARKLYDMMPVKDVVASTNMIGG 181
Query: 426 FAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAP 485
G + A +F M+E ++ V + ++ V+ +KLF M + ++
Sbjct: 182 LCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS- 236
Query: 486 RHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQ--VHGEVELGEFA-A 542
+ M+ Y + + A E E MP P + AC + G E+GE + A
Sbjct: 237 ----WTSMLLGYTLSGRIEDAEEFFEVMPMKPVI--------ACNAMIVGFGEVGEISKA 284
Query: 543 KQILELEPDHDGA 555
+++ +L D D A
Sbjct: 285 RRVFDLMEDRDNA 297
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 147/306 (48%), Gaps = 20/306 (6%)
Query: 257 SALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV 316
+++V+ Y + G AR+L+D++S +++V ++SGY K+ M+ +AR +F+ + E+++V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 317 CWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYA 376
W+AM+ GY + EA LF M RN +++ + G + +AR ++
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERN----EVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAM 436
+ + + +I + G + A+ +F+ M +NV++W++MI + + + A
Sbjct: 168 PV----KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223
Query: 437 NLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDL 496
LF M E+ V + +L + +G +E+ ++ F M + IA M+
Sbjct: 224 KLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIA-----CNAMIVG 274
Query: 497 YCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG-EVE-LGEFAAKQILELEPDHDG 554
+ + KA + + M N W ++ A + G E+E L FA Q + P
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNA-TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPS 333
Query: 555 ALVVLS 560
+ +LS
Sbjct: 334 LISILS 339
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 272/457 (59%), Gaps = 4/457 (0%)
Query: 176 DKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGH--SGN 233
++ + V+W I+ ++G + K + +M + +P+ + +LS CG SG+
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 234 LSYGKAIHEFIMDNGLALS-AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLS 292
+ G +H + GL + + +A++ MY G AR ++D + K+ V M+
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 293 GYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQIT 352
GY + G V +A +FD++ E+DL+ W+AMI+G+ + +EAL F EMQ+ + PD +
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 353 MLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP 412
+++A++AC N+GAL+ W+H Y F ++ V+N+LID+Y +CG + A++VF NM
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 413 RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQK 472
++ V+SW+S+I FA +G A+ ++ F +M+E+ +P+ V F G L ACSH GLVEEG +
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 473 LFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVH 532
F M ++ I+PR EHYGC+VDLY RA L A++L++SMP PN ++ GSL++AC H
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 533 G-EVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASS 591
G + L E K + +L V+LSN+YA + +W +R+ M G+ K+ S
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 592 RVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKL 628
+EI++ +HVFM D H ++ I + LE + S+L+L
Sbjct: 449 SIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRL 485
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 148/330 (44%), Gaps = 65/330 (19%)
Query: 135 LGLEIHGLASKLGFHSD-PFIQTGLIAMYSACRRIMDARLVFD----------------- 176
LG +HG A KLG + + T +I MYS R ARLVFD
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGY 150
Query: 177 --------------KMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILC 222
KM RD ++W MI+G+ + G ++ L + EM+ S KPD V +
Sbjct: 151 MRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAII 210
Query: 223 TVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK 282
L+AC + G LS+G +H +++ + + ++L+++Y CG ++ AR+++ + +
Sbjct: 211 AALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR 270
Query: 283 HLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQ 342
+V +++ G+A +G E+L F +MQ
Sbjct: 271 TVVSWNSVIVGFAANG-------------------------------NAHESLVYFRKMQ 299
Query: 343 LRNIVPDQITMLSAISACANVGALAQA-RWIHTYADKNGFGRSLSVNNALIDMYAKCGNL 401
+ PD +T A++AC++VG + + R+ + L+D+Y++ G L
Sbjct: 300 EKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRL 359
Query: 402 IRAKEVFENMPRK-NVISWSSMINAFAMHG 430
A ++ ++MP K N + S++ A + HG
Sbjct: 360 EDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 4/229 (1%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++P D ++ + + L +++++ G A + A
Sbjct: 162 MFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGA 221
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L GL +H F ++ + LI +Y C + AR VF M R V+WN +I G
Sbjct: 222 LSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVG 281
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
+ +GN + L + +M+ KPD V L+AC H G + G + IM +S
Sbjct: 282 FAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQ-IMKCDYRIS 340
Query: 253 AHLQ--SALVNMYVNCGAMDLARELYDKLSSK-HLVVSTAMLSGYAKHG 298
++ LV++Y G ++ A +L + K + VV ++L+ + HG
Sbjct: 341 PRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 189/621 (30%), Positives = 302/621 (48%), Gaps = 33/621 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF Q+P D N L+ + L L + G A
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
G +HGL G + I L++MY + ++R V +M RD V WN +I G
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNL-SYGKAIHEFIMDNGLAL 251
Y + + D+ L ++ M+ + + + +VLSAC G+L GK +H +I+ G
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
H++++L+ MY CG + +++L F+ +
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDL-------------------------------FNGLD 526
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
++++ W+AM++ A +E LKL ++M+ + DQ + +SA A + L + +
Sbjct: 527 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 586
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
+H A K GF + NA DMY+KCG + ++ +++ SW+ +I+A HGY
Sbjct: 587 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 646
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
FH M E I+P V F+ +L ACSH GLV++G + + + G+ P EH
Sbjct: 647 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 706
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPD 551
C++DL R+ L +A I MP PN ++W SL+++C++HG ++ G AA+ + +LEP+
Sbjct: 707 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 766
Query: 552 HDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQ 611
D V+ SN++A RW DV +R+ M K I K++A S V++ ++V F + DR H Q
Sbjct: 767 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQ 826
Query: 612 SREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKE 671
+ EIY KLE++ +K Y TS HSE+LAL Y L+S +
Sbjct: 827 TMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMST-PEG 885
Query: 672 SCIRIVKNLRICEDCHSFMKL 692
S +RI KNLRIC DCHS K
Sbjct: 886 STVRIFKNLRICSDCHSVYKF 906
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 206/465 (44%), Gaps = 34/465 (7%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++P+ + L+ S P+ + +Y+ +R G +
Sbjct: 116 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 175
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
LG +I G K G S ++ LI+M + + A +FD+MS RD ++WN +
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 235
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y Q+G+ ++ +++ M+ + + + T+LS GH + +G+ IH ++ G
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG---- 291
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+D + + V +L YA G +A +F Q+
Sbjct: 292 -----------------------FDSV----VCVCNTLLRMYAGAGRSVEANLVFKQMPT 324
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
KDL+ W+++++ + + +AL L M + +T SA++AC + R +
Sbjct: 325 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 384
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H +G + + NAL+ MY K G + ++ V MPR++V++W+++I +A
Sbjct: 385 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDP 444
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAG-LVEEGQKLFSSMINEHGIAPRHEHYG 491
+ A+ F M+ E + N + + VL AC G L+E G+ L + +++ G
Sbjct: 445 DKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKN 503
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
++ +Y + L + +L + N+I W ++++A HG E
Sbjct: 504 SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGE 547
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 223/493 (45%), Gaps = 35/493 (7%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F +P + N ++ + R + ++K+ +G A ++ +
Sbjct: 14 LFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGS 73
Query: 133 LYL-GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
++ G+++HG +K G SD ++ T ++ +Y + +R VF++M R+ V+W ++
Sbjct: 74 MFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMV 133
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
GY G ++V+ +Y+ M+ + + V+S+CG + S G+ I ++ +GL
Sbjct: 134 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 193
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
++++L++M + G +D A +IFDQ+
Sbjct: 194 KLAVENSLISMLGSMGNVDYAN-------------------------------YIFDQMS 222
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
E+D + W+++ + YA++ +E+ ++F+ M+ + + T+ + +S +V R
Sbjct: 223 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 282
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
IH K GF + V N L+ MYA G + A VF+ MP K++ISW+S++ +F G
Sbjct: 283 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 342
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
+ A+ L M N V F L AC E+G ++ ++ G+
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGN 401
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPD 551
+V +Y + + ++ ++ MP +V+ W +L+ E AA Q + +E
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG-YAEDEDPDKALAAFQTMRVEGV 459
Query: 552 HDGALVVLSNIYA 564
+ V+S + A
Sbjct: 460 SSNYITVVSVLSA 472
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 176/369 (47%), Gaps = 34/369 (9%)
Query: 161 MYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVI 220
MY+ R+ AR +FD M R+ V+WN M+ G + G Y + ++ + +M KP +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 221 LCTVLSACGHSGNL-SYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL 279
+ ++++ACG SG++ G +H F+ +GL ++ +A++++Y G + +R++++++
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 280 SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFN 339
+++V T+++ GY+ G +P+E + ++
Sbjct: 121 PDRNVVSWTSLMVGYSDKG-------------------------------EPEEVIDIYK 149
Query: 340 EMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCG 399
M+ + ++ +M IS+C + + R I K+G L+V N+LI M G
Sbjct: 150 GMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMG 209
Query: 400 NLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLY 459
N+ A +F+ M ++ ISW+S+ A+A +G+ + +F M+ E N +L
Sbjct: 210 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 269
Query: 460 ACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNV 519
H + G+ + ++ + G ++ +Y A +A + + MP ++
Sbjct: 270 VLGHVDHQKWGRGI-HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDL 327
Query: 520 IIWGSLMSA 528
I W SLM++
Sbjct: 328 ISWNSLMAS 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 394 MYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVI 453
MY K G + A+ +F+ MP +N +SW++M++ G M F +M + I+P+ +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 454 FIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRA---------NLLR 504
++ AC +G +F + HG + G + D+Y L+
Sbjct: 61 IASLVTACGRSG------SMFREGVQVHGFVAKS---GLLSDVYVSTAILHLYGVYGLVS 111
Query: 505 KAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
+ ++ E MP NV+ W SLM GE E
Sbjct: 112 CSRKVFEEMP-DRNVVSWTSLMVGYSDKGEPE 142
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 327 bits (837), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 305/572 (53%), Gaps = 37/572 (6%)
Query: 126 AVSKASALYLGLEIHGLA-SKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
A A +L+ G++I L + +P + + LI ++S CRR+ AR +FD ++ +
Sbjct: 140 ACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLL 199
Query: 185 T---WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
T W M GY ++G+ L +Y +M S +P + L AC +L G+ IH
Sbjct: 200 TEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIH 259
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVK 301
I+ +E D+ VV +L Y + G+
Sbjct: 260 AQIVKR-------------------------KEKVDQ------VVYNVLLKLYMESGLFD 288
Query: 302 DARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACA 361
DAR +FD + E+++V W+++IS ++ + E LF +MQ I T+ + + AC+
Sbjct: 289 DARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACS 348
Query: 362 NVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSS 421
V AL + IH K+ + + N+L+DMY KCG + ++ VF+ M K++ SW+
Sbjct: 349 RVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNI 408
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
M+N +A++G +NLF M E + P+G+ F+ +L CS GL E G LF M E
Sbjct: 409 MLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEF 468
Query: 482 GIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFA 541
++P EHY C+VD+ RA +++A+++IE+MPF P+ IWGSL+++C++HG V +GE A
Sbjct: 469 RVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIA 528
Query: 542 AKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHV 601
AK++ LEP + G V++SNIYA + W++V IR+ M +G+ KE S V++ +++ +
Sbjct: 529 AKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQI 588
Query: 602 FMMADRYHKQSREIYKKL-EEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLAL 660
F+ Y ++ + YKK+ E+ ++ Y+P+TS HSE+LA
Sbjct: 589 FVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLAT 648
Query: 661 CYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
Y LI IRI KNLR+C DCHS+MK+
Sbjct: 649 TYSLIHTGEGVP-IRITKNLRVCADCHSWMKI 679
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 35/341 (10%)
Query: 93 SRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDP 152
SR+ +P++ L +Y + KA L +G IH K D
Sbjct: 212 SRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQ 271
Query: 153 FIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTS 212
+ L+ +Y DAR VFD MS R+ VTWN +I + ++ L+ +M+
Sbjct: 272 VVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEE 331
Query: 213 DTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLA 272
L T+L AC L GK IH I+ + L ++L++MY CG ++ +
Sbjct: 332 MIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYS 391
Query: 273 RELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQ 332
R ++D + +K L ML+ YA +G +++ +F+ ++E SG A
Sbjct: 392 RRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE----------SGVA------ 435
Query: 333 EALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNN--A 390
PD IT ++ +S C++ G + K F S ++ +
Sbjct: 436 ---------------PDGITFVALLSGCSDTGLTEYGLSLFERM-KTEFRVSPALEHYAC 479
Query: 391 LIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMINAFAMHG 430
L+D+ + G + A +V E MP K S W S++N+ +HG
Sbjct: 480 LVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 325 bits (833), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 175/556 (31%), Positives = 299/556 (53%), Gaps = 13/556 (2%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F N + N ++ S+ L L+ +L G +A +
Sbjct: 338 LFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKG 397
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L GL+I+GLA K D + I MY C+ + +A VFD+M RDAV+WN +I
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
+ Q+G + L L+ M S +PD ++L AC G+L YG IH I+ +G+A +
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASN 516
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ + +L++MY CG ++ A +++ + + V G +++ + ++ ++
Sbjct: 517 SSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV-----------SGTMEELEKMHNKRLQ 565
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
+ V W+++ISGY +Q ++A LF M I PD+ T + + CAN+ + + I
Sbjct: 566 EMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQI 625
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H K + + + L+DMY+KCG+L ++ +FE R++ ++W++MI +A HG
Sbjct: 626 HAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKG 685
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
A+ LF RM E+I+PN V FI +L AC+H GL+++G + F M ++G+ P+ HY
Sbjct: 686 EEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSN 745
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVH-GEVELGEFAAKQILELEPD 551
MVD+ ++ +++A+ELI MPF + +IW +L+ C +H VE+ E A +L L+P
Sbjct: 746 MVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQ 805
Query: 552 HDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQ 611
A +LSN+YA W V +R++M + KE S VE+ +E+HVF++ D+ H +
Sbjct: 806 DSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPR 865
Query: 612 SREIYKKLEEVVSELK 627
EIY++L + SE+K
Sbjct: 866 WEEIYEELGLIYSEMK 881
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 205/443 (46%), Gaps = 36/443 (8%)
Query: 74 FSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASAL 133
F+ +P D N +L ++ ++ ++ + R G K S
Sbjct: 137 FNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDT 196
Query: 134 YLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGY 193
LG++IHG+ ++G +D + L+ MY+ +R +++ VF + +++V+W+ +I G
Sbjct: 197 SLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGC 256
Query: 194 CQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
Q+ LK ++EM+ + I +VL +C L G +H + + A
Sbjct: 257 VQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG 316
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
+V TA L YAK ++DA+ +FD
Sbjct: 317 -------------------------------IVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
+ ++AMI+GY++ + +AL LF+ + + D+I++ ACA V L++ I+
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 374 TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYAN 433
A K+ + V NA IDMY KC L A VF+ M R++ +SW+++I A +G
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGY 465
Query: 434 SAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC- 492
+ LF M IEP+ F +L AC+ G + G ++ SS++ + G+A + GC
Sbjct: 466 ETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIV-KSGMAS-NSSVGCS 522
Query: 493 MVDLYCRANLLRKAMELIESMPF 515
++D+Y + ++ +A E I S F
Sbjct: 523 LIDMYSKCGMIEEA-EKIHSRFF 544
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/504 (24%), Positives = 226/504 (44%), Gaps = 60/504 (11%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF IP ++ + ++ ++ L ++++++V ++ + S
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L LG ++H A K F +D ++T + MY+ C + DA+++FD + + ++N MI G
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 356
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y Q + + L L+ + +S D + L V AC LS G I+ + + L+L
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 416
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ +A ++MY C A+ A ++D++
Sbjct: 417 VCVANAAIDMYGKCQALAEAFRVFDEMR-------------------------------R 445
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
+D V W+A+I+ + ++ + E L LF M I PD+ T S + AC G+L I
Sbjct: 446 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEI 504
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEV----------------FENMPRKNV 416
H+ K+G + SV +LIDMY+KCG + A+++ E M K +
Sbjct: 505 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 564
Query: 417 ----ISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQK 472
+SW+S+I+ + M + A LF RM E I P+ + VL C++ G++
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 624
Query: 473 LFSSMINEHGIAPRHEHYGC--MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQ 530
+ + +I + + + Y C +VD+Y + L + + E + + W +++
Sbjct: 625 IHAQVIKKE---LQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYA 680
Query: 531 VHGEVELG-EFAAKQILE-LEPDH 552
HG+ E + + ILE ++P+H
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNH 704
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 203/446 (45%), Gaps = 36/446 (8%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
K +K AL LG + H GF F+ L+ +Y+ R + A +VFDKM RD V
Sbjct: 56 KECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVV 115
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH--E 242
+WN MI+GY +S + + + M D +L SG L G+++ E
Sbjct: 116 SWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSML---------SGYLQNGESLKSIE 166
Query: 243 FIMDNG--------------LALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVST 288
+D G L + + L+ + M ++ + + +V ++
Sbjct: 167 VFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVG-------CDTDVVAAS 219
Query: 289 AMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVP 348
A+L YAK ++ +F I EK+ V WSA+I+G +++ ALK F EMQ N
Sbjct: 220 ALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV 279
Query: 349 DQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVF 408
Q S + +CA + L +H +A K+ F V A +DMYAKC N+ A+ +F
Sbjct: 280 SQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILF 339
Query: 409 ENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVE 468
+N N S+++MI ++ + A+ LFHR+ + + + GV AC+ +
Sbjct: 340 DNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLS 399
Query: 469 EGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
EG +++ I + ++ +D+Y + L +A + + M + + W ++++A
Sbjct: 400 EGLQIYGLAI-KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Query: 529 CQVHGEVELGEFAAKQIL--ELEPDH 552
+ +G+ F +L +EPD
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIEPDE 483
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 122/250 (48%)
Query: 224 VLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKH 283
V C G L GK H ++ +G + + + L+ +Y N A ++DK+ +
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL 343
+V M++GY+K + A F+ + +D+V W++M+SGY ++ + +++++F +M
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR 403
I D T + C+ + + IH + G + +AL+DMYAK +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 404 AKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
+ VF+ +P KN +SWS++I + + A+ F M++ + + I+ VL +C+
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 464 AGLVEEGQKL 473
+ G +L
Sbjct: 294 LSELRLGGQL 303
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 297/555 (53%), Gaps = 37/555 (6%)
Query: 140 HGLASKLGFH-SDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGN 198
HGLA LG S+ F+ + L+ MY + +A+LV D++ +D V +I GY Q G
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 199 YDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSA 258
+ +K ++ M +P+ +VL +CG+ ++ GK IH ++ +G + Q++
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307
Query: 259 LVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCW 318
L+ MY+ C +V D+ +F I + V W
Sbjct: 308 LLTMYLRCS-------------------------------LVDDSLRVFKCIEYPNQVSW 336
Query: 319 SAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADK 378
+++ISG ++ + + AL F +M +I P+ T+ SA+ C+N+ + R IH K
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK 396
Query: 379 NGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNL 438
GF R + LID+Y KCG A+ VF+ + +VIS ++MI ++A +G+ A++L
Sbjct: 397 YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDL 456
Query: 439 FHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYC 498
F RM ++PN V + VL AC+++ LVEEG +LF S + I ++HY CMVDL
Sbjct: 457 FERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDS-FRKDKIMLTNDHYACMVDLLG 515
Query: 499 RANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVV 558
RA L +A E++ + P++++W +L+SAC+VH +VE+ E ++ILE+EP +G L++
Sbjct: 516 RAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLIL 574
Query: 559 LSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRY-HKQSREIYK 617
+SN+YA +WN V ++ M + + K A S VEIN E H FM D + H S +I +
Sbjct: 575 MSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILE 634
Query: 618 KLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIV 677
LEE++ + K + Y S HSEKLA+ + + R IRI+
Sbjct: 635 NLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVW--RNVGGSIRIL 692
Query: 678 KNLRICEDCHSFMKL 692
KNLR+C DCHS++K+
Sbjct: 693 KNLRVCVDCHSWIKI 707
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 133/263 (50%), Gaps = 3/263 (1%)
Query: 285 VVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLR 344
+ + ++ K G + AR +FD + E+ +V W+++I+ + + +EA++++ M
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 345 NIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS-LSVNNALIDMYAKCGNLIR 403
N++PD+ T+ S A +++ +A+ H A G S + V +AL+DMY K G
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 404 AKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
AK V + + K+V+ +++I ++ G A+ F M E ++PN + VL +C +
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWG 523
+ G KL ++ + G ++ +Y R +L+ ++ + + + + PN + W
Sbjct: 280 LKDIGNG-KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWT 337
Query: 524 SLMSACQVHGEVELGEFAAKQIL 546
SL+S +G E+ ++++
Sbjct: 338 SLISGLVQNGREEMALIEFRKMM 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 104/226 (46%), Gaps = 20/226 (8%)
Query: 339 NEMQLRNIVPDQITMLSAISA----CANVGALAQARWIHTYADKNGFGRSLSVNNALIDM 394
N+ +L I D +T S C + +++ + I + K+GF +S + L+D
Sbjct: 50 NQFRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDA 108
Query: 395 YAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIF 454
KCG++ A++VF+ M +++++W+S+I H + A+ ++ M ++ P+
Sbjct: 109 SLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTL 168
Query: 455 IGVLYACSHAGLVEEGQKLFSSMINEHGIA------PRHEHYG-CMVDLYCRANLLRKAM 507
V A S L +E Q+ HG+A + G +VD+Y + R+A
Sbjct: 169 SSVFKAFSDLSLEKEAQR-------SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAK 221
Query: 508 ELIESMPFAPNVIIWGSLMSACQVHGEVE-LGEFAAKQILELEPDH 552
+++ + V+I ++ Q + E + F + + +++P+
Sbjct: 222 LVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNE 267
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 185/601 (30%), Positives = 306/601 (50%), Gaps = 75/601 (12%)
Query: 157 GLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKP 216
GL++ Y I +AR VFD M R+ V+W ++ GY +G D L+ +M +
Sbjct: 84 GLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVS 143
Query: 217 DGVILCTVLSACGHSGNLSYGKAIHEFIMD-NGLALSAHLQSALVNMYVNCGAMDLAREL 275
V+L L G + ++E I D + +A ++++++ G +D ARE+
Sbjct: 144 WTVMLIGFL----QDGRIDDACKLYEMIPDKDNIA-----RTSMIHGLCKEGRVDEAREI 194
Query: 276 YDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWS---------------- 319
+D++S + ++ T M++GY ++ V DAR IFD + EK V W+
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAE 254
Query: 320 ---------------AMISGYAESDQPQEALKLFNEMQLRN------------------- 345
AMISG + + +A ++F+ M+ RN
Sbjct: 255 ELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELE 314
Query: 346 ------------IVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALID 393
+ P T++S +S CA++ +L + +H + F + V + L+
Sbjct: 315 ALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMT 374
Query: 394 MYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMK-EEDIEPNGV 452
MY KCG L+++K +F+ P K++I W+S+I+ +A HG A+ +F M +PN V
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 453 IFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIES 512
F+ L ACS+AG+VEEG K++ SM + G+ P HY CMVD+ RA +AME+I+S
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 513 MPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDV 572
M P+ +WGSL+ AC+ H ++++ EF AK+++E+EP++ G ++LSN+YA + RW DV
Sbjct: 495 MTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADV 554
Query: 573 GLIRQSMANKGISKEKASSRVEINNEVHVFMMAD-RYHKQSREIYKKLEEVVSELKLVSY 631
+R+ M + + K S E+ N+VH F H + I K L+E+ L+ Y
Sbjct: 555 AELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGY 614
Query: 632 TPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMK 691
P S +HSE+LA+ Y L+ K + IR++KNLR+C DCH+ +K
Sbjct: 615 NPDCSYALHDVDEEEKVNSLKYHSERLAVAYALL-KLSEGIPIRVMKNLRVCSDCHTAIK 673
Query: 692 L 692
+
Sbjct: 674 I 674
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 193/392 (49%), Gaps = 23/392 (5%)
Query: 158 LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPD 217
++A Y A DAR +FD+M R+ ++WN ++ GY ++G D+ K+++ M +
Sbjct: 54 MVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV--- 110
Query: 218 GVILCTVLSACGHSGNLSYGKAIH-EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELY 276
V ++ H+G + +++ + N ++ + L L + G +D A +LY
Sbjct: 111 -VSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD-----GRIDDACKLY 164
Query: 277 DKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALK 336
+ + K + T+M+ G K G V +AR IFD++ E+ ++ W+ M++GY ++++ +A K
Sbjct: 165 EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARK 224
Query: 337 LFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYA 396
+F+ M + +++ S + G + A + + + NA+I
Sbjct: 225 IFDVMPEKT----EVSWTSMLMGYVQNGRIEDAEELFEVMPV----KPVIACNAMISGLG 276
Query: 397 KCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIG 456
+ G + +A+ VF++M +N SW ++I +G+ A++LF M+++ + P I
Sbjct: 277 QKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLIS 336
Query: 457 VLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFA 516
+L C+ + G+++ + ++ + ++ +Y + L K+ + + P +
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA-SVLMTMYIKCGELVKSKLIFDRFP-S 394
Query: 517 PNVIIWGSLMSACQVHGEVELGEFAAKQILEL 548
++I+W S++S HG LGE A K E+
Sbjct: 395 KDIIMWNSIISGYASHG---LGEEALKVFCEM 423
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 159/347 (45%), Gaps = 49/347 (14%)
Query: 156 TGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTK 215
T ++ Y R+ DAR +FD M + V+W M+ GY Q+G + +L+E M K
Sbjct: 207 TTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP---VK 263
Query: 216 PDGVILC-TVLSACGHSGNLSYGKAIHEFIMD---------------NGLALSA------ 253
P VI C ++S G G ++ + + + + + NG L A
Sbjct: 264 P--VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFIL 321
Query: 254 -------HLQSALVNMYVNCGAMDLARELYDKLSSKHLV---------VSTAMLSGYAKH 297
L+++ C + LA + K LV V++ +++ Y K
Sbjct: 322 MQKQGVRPTFPTLISILSVCAS--LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 298 GMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLR-NIVPDQITMLSA 356
G + ++ IFD+ KD++ W+++ISGYA +EALK+F EM L + P+++T ++
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 357 ISACANVGALAQARWIHTYADKNGFGRSLSVNNA-LIDMYAKCGNLIRAKEVFENMP-RK 414
+SAC+ G + + I+ + + ++ + A ++DM + G A E+ ++M
Sbjct: 440 LSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEP 499
Query: 415 NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGV-IFIGVLYA 460
+ W S++ A H + A ++ E + E +G I + +YA
Sbjct: 500 DAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYA 546
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 128/284 (45%), Gaps = 53/284 (18%)
Query: 267 GAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYA 326
G + AR+L+D SK + +M++GY + M +DAR +FD++ +++++ W+ ++SGY
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYM 90
Query: 327 ESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLS 386
++ + EA K+F+ M RN+V W
Sbjct: 91 KNGEIDEARKVFDLMPERNVVS----------------------W--------------- 113
Query: 387 VNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEED 446
AL+ Y G + A+ +F MP KN +SW+ M+ F G + A L+ + ++D
Sbjct: 114 --TALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKD 171
Query: 447 IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKA 506
+ +++ G V+E +++F M I + MV Y + N + A
Sbjct: 172 ----NIARTSMIHGLCKEGRVDEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDA 222
Query: 507 MELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEP 550
++ + MP V W S++ +G +E A+++ E+ P
Sbjct: 223 RKIFDVMPEKTEV-SWTSMLMGYVQNGRIE----DAEELFEVMP 261
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 115/245 (46%), Gaps = 7/245 (2%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF + + ++++ R+ L L+ +++ G + ++
Sbjct: 287 VFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLAS 346
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L+ G ++H + F D ++ + L+ MY C ++ ++L+FD+ +D + WN +I G
Sbjct: 347 LHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISG 406
Query: 193 YCQSGNYDQVLKLYEEMKTS-DTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA- 250
Y G ++ LK++ EM S TKP+ V LSAC ++G + G I+E M++
Sbjct: 407 YASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYES-MESVFGV 465
Query: 251 --LSAHLQSALVNMYVNCGAMDLARELYDKLSSK-HLVVSTAMLSGYAKHGMVKDARFIF 307
++AH + +V+M G + A E+ D ++ + V ++L H + A F
Sbjct: 466 KPITAHY-ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCA 524
Query: 308 DQIVE 312
+++E
Sbjct: 525 KKLIE 529
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 321 bits (823), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 171/498 (34%), Positives = 269/498 (54%), Gaps = 34/498 (6%)
Query: 99 QNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGL 158
+ L L+ ++R A +K SAL+ G HG K G + T L
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSL 283
Query: 159 IAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDG 218
+ MY C I +AR VF++ SH D V W MI GY +G+ ++ L L+++MK + KP+
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 219 VILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDK 278
V + +VLS CG NL G+++H + G+ ++ +ALV+MY C Y
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKC---------YQN 393
Query: 279 LSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLF 338
+DA+++F+ EKD+V W+++ISG++++ EAL LF
Sbjct: 394 ----------------------RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLF 431
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGF--GRSLSVNNALIDMYA 396
+ M ++ P+ +T+ S SACA++G+LA +H Y+ K GF S+ V AL+D YA
Sbjct: 432 HRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYA 491
Query: 397 KCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIG 456
KCG+ A+ +F+ + KN I+WS+MI + G ++ LF M ++ +PN F
Sbjct: 492 KCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTS 551
Query: 457 VLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFA 516
+L AC H G+V EG+K FSSM ++ P +HY CMVD+ RA L +A+++IE MP
Sbjct: 552 ILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQ 611
Query: 517 PNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIR 576
P+V +G+ + C +H +LGE K++L+L PD V++SN+YA + RWN +R
Sbjct: 612 PDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVR 671
Query: 577 QSMANKGISKEKASSRVE 594
M +G+SK S +E
Sbjct: 672 NLMKQRGLSKIAGHSTME 689
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 194/401 (48%), Gaps = 45/401 (11%)
Query: 140 HGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNY 199
HG+ + G D I T L+++Y DARLVFD++ D W +M+ YC +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSAL 259
+V+KLY+ + + D ++ L AC +L GK IH L
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH---------------CQL 168
Query: 260 VNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWS 319
V K+ S VV T +L YAK G +K A +F+ I +++VCW+
Sbjct: 169 V-----------------KVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWT 211
Query: 320 AMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKN 379
+MI+GY ++D +E L LFN M+ N++ ++ T + I AC + AL Q +W H K+
Sbjct: 212 SMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS 271
Query: 380 GFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLF 439
G S + +L+DMY KCG++ A+ VF +++ W++MI + +G N A++LF
Sbjct: 272 GIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLF 331
Query: 440 HRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY-----GCMV 494
+MK +I+PN V VL C +E G+ + HG++ + + +V
Sbjct: 332 QKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV-------HGLSIKVGIWDTNVANALV 384
Query: 495 DLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEV 535
+Y + R A + E M +++ W S++S +G +
Sbjct: 385 HMYAKCYQNRDAKYVFE-MESEKDIVAWNSIISGFSQNGSI 424
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 357 ISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNV 416
+S C N+ +L Q+ H NG +S+ L+ +Y G A+ VF+ +P +
Sbjct: 51 LSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDF 107
Query: 417 ISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSS 476
W M+ + ++ + + L+ + + + ++F L AC+ ++ G+K+
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 477 MINEHGIAPRHEH--YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
++ P ++ ++D+Y + ++ A ++ + NV+ W S+++
Sbjct: 168 LVK----VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR-NVVCWTSMIAG 216
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/557 (31%), Positives = 291/557 (52%), Gaps = 33/557 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++ + D N ++ + L++++ G KA +
Sbjct: 485 IFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHG 544
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
LY G ++H L+ K G D + LI MYS C I DAR VF + V+ N +I G
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y Q+ N ++ + L++EM T P + T++ AC +L+ G H I G +
Sbjct: 605 YSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE 663
Query: 253 A-HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+L +L+ MY+N M A L+ +LSS
Sbjct: 664 GEYLGISLLGMYMNSRGMTEACALFSELSSP----------------------------- 694
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
K +V W+ M+SG++++ +EALK + EM+ ++PDQ T ++ + C+ + +L + R
Sbjct: 695 -KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA 753
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMHG 430
IH+ +N LIDMYAKCG++ + +VF+ M R+ NV+SW+S+IN +A +G
Sbjct: 754 IHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG 813
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY 490
YA A+ +F M++ I P+ + F+GVL ACSHAG V +G+K+F MI ++GI R +H
Sbjct: 814 YAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV 873
Query: 491 GCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEP 550
CMVDL R L++A + IE+ P+ +W SL+ AC++HG+ GE +A++++ELEP
Sbjct: 874 ACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEP 933
Query: 551 DHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHK 610
+ A V+LSNIYA + W +R+ M ++G+ K S +++ H+F D+ H
Sbjct: 934 QNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHS 993
Query: 611 QSREIYKKLEEVVSELK 627
+ +I LE++ +K
Sbjct: 994 EIGKIEMFLEDLYDLMK 1010
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 228/485 (47%), Gaps = 39/485 (8%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++ +PD N ++ + + + +R+ A+ +
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L LGL +H A KLG S+ ++ + L++MYS C ++ A VF+ + ++ V WN MI G
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y +G +V++L+ +MK+S D ++LS C S +L G H I+ LA
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA-- 460
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
K+L V A++ YAK G ++DAR IF+++ +
Sbjct: 461 -----------------------------KNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
+D V W+ +I Y + + EA LF M L IV D + S + AC +V L Q + +
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H + K G R L ++LIDMY+KCG + A++VF ++P +V+S +++I ++ +
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL- 610
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG- 491
A+ LF M + P+ + F ++ AC + G + F I + G + E+ G
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ-FHGQITKRGFSSEGEYLGI 669
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPD 551
++ +Y + + +A L + ++++W +MS H + E A K E+
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG---HSQNGFYEEALKFYKEMR-- 724
Query: 552 HDGAL 556
HDG L
Sbjct: 725 HDGVL 729
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 201/434 (46%), Gaps = 38/434 (8%)
Query: 130 ASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIM 189
A AL +G +H + LG S+ + ++ +Y+ C ++ A FD + +D WN M
Sbjct: 73 ALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSM 131
Query: 190 IDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGL 249
+ Y G +VL+ + + + P+ VLS C N+ +G+ IH ++ GL
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 250 ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGM---------- 299
+++ ALV+MY C + AR +++ + + V T + SGY K G+
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 300 -------------------------VKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEA 334
+KDAR +F ++ D+V W+ MISG+ + A
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 335 LKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDM 394
++ F M+ ++ + T+ S +SA V L +H A K G ++ V ++L+ M
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 395 YAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIF 454
Y+KC + A +VFE + KN + W++MI +A +G ++ M LF MK + F
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 455 IGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP 514
+L C+ + +E G + F S+I + +A +VD+Y + L A ++ E M
Sbjct: 432 TSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 515 FAPNVIIWGSLMSA 528
NV W +++ +
Sbjct: 491 DRDNV-TWNTIIGS 503
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 179/369 (48%), Gaps = 34/369 (9%)
Query: 147 GFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLY 206
G D +I Y ++ DARL+F +MS D V WN+MI G+ + G ++ +
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 207 EEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNC 266
M+ S K L +VLSA G NL G +H + GLA + ++ S+LV+MY C
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 267 GAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYA 326
M+ A + +F+ + EK+ V W+AMI GYA
Sbjct: 376 EKMEAAAK-------------------------------VFEALEEKNDVFWNAMIRGYA 404
Query: 327 ESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLS 386
+ + + ++LF +M+ D T S +S CA L H+ K ++L
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF 464
Query: 387 VNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEED 446
V NAL+DMYAKCG L A+++FE M ++ ++W+++I ++ + A +LF RM
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG 524
Query: 447 IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG-CMVDLYCRANLLRK 505
I +G L AC+H + +G+++ + + G+ R H G ++D+Y + +++
Sbjct: 525 IVSDGACLASTLKACTHVHGLYQGKQVHCLSV-KCGL-DRDLHTGSSLIDMYSKCGIIKD 582
Query: 506 AMELIESMP 514
A ++ S+P
Sbjct: 583 ARKVFSSLP 591
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 143/341 (41%), Gaps = 57/341 (16%)
Query: 204 KLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMY 263
KL++ K D P + L L GKA+H + G+ L +A+V++Y
Sbjct: 57 KLFKSRKVFDEMPQRLALA-----------LRIGKAVHSKSLILGIDSEGRLGNAIVDLY 105
Query: 264 VNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMIS 323
C + A + +D L EKD+ W++M+S
Sbjct: 106 AKCAQVSYAEKQFDFL--------------------------------EKDVTAWNSMLS 133
Query: 324 GYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGR 383
Y+ +P + L+ F + I P++ T +S CA + R IH K G R
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 384 SLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMK 443
+ AL+DMYAKC + A+ VFE + N + W+ + + + G A+ +F RM+
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 444 EEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA-----PRHEHYGC-MVDLY 497
+E P+ + F+ V+ G +++ + LF M + +A H GC V +
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIE 313
Query: 498 CRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELG 538
N+ + +++ S GS++SA + ++LG
Sbjct: 314 YFFNMRKSSVKSTRS--------TLGSVLSAIGIVANLDLG 346
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/562 (32%), Positives = 295/562 (52%), Gaps = 37/562 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTP-QNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKAS 131
+FS P+ + N ++R L+ + + L LY++++ G A +K
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
+ +G +H K+G D I LI MY+ C ++ AR +FD+++ RD V+WN MI
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMIS 206
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
GY ++G + L+ +M+ +PD L ++L AC H G+L G+ + E + + L
Sbjct: 207 GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL 266
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
S L S L++MY CG +D AR +F+Q++
Sbjct: 267 STFLGSKLISMYGKCGDLD-------------------------------SARRVFNQMI 295
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
+KD V W+AMI+ Y+++ + EA KLF EM+ + PD T+ + +SAC +VGAL +
Sbjct: 296 KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ 355
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
I T+A + ++ V L+DMY KCG + A VFE MP KN +W++MI A+A G+
Sbjct: 356 IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGH 415
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
A A+ LF RM + P+ + FIGVL AC HAGLV +G + F M + G+ P+ EHY
Sbjct: 416 AKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYT 472
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILEL-EP 550
++DL RA +L +A E +E P P+ I+ +++ AC +V + E A + ++E+ E
Sbjct: 473 NIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEA 532
Query: 551 DHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHK 610
+ G V+ SN+ A + W++ +R M ++G+ K S +EI E+ F+ Y +
Sbjct: 533 KNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQ 592
Query: 611 QSREIYKKLEE-VVSELKLVSY 631
RE L + +V E+K Y
Sbjct: 593 CGREDSGSLFDLLVEEMKRERY 614
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 150/318 (47%), Gaps = 45/318 (14%)
Query: 305 FIFDQIVEKDLVCWSAMISGYAESDQPQEA-LKLFNEMQLRNIVPDQITMLSAISACANV 363
F+F E + ++ MI G + EA L L+ M+ + PD+ T ACA +
Sbjct: 86 FLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKL 145
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMI 423
+ R +H+ K G R + +N++LI MYAKCG + A+++F+ + ++ +SW+SMI
Sbjct: 146 EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 205
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAG------LVEE-------- 469
+ ++ GYA AM+LF +M+EE EP+ + +L ACSH G L+EE
Sbjct: 206 SGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG 265
Query: 470 ---------------------GQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAME 508
+++F+ MI + +A + M+ +Y + +A +
Sbjct: 266 LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVA-----WTAMITVYSQNGKSSEAFK 320
Query: 509 L---IESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVV-LSNIYA 564
L +E +P+ +++SAC G +ELG+ EL H+ + L ++Y
Sbjct: 321 LFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYG 380
Query: 565 KERRWNDVGLIRQSMANK 582
K R + + ++M K
Sbjct: 381 KCGRVEEALRVFEAMPVK 398
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 284/523 (54%), Gaps = 34/523 (6%)
Query: 145 KLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLK 204
K + D + I ++ +R+ A +M + +N + G+ + + L+
Sbjct: 798 KTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLE 857
Query: 205 LYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYV 264
LY M P +++ A + +G+++ I G +Q+ L++ Y
Sbjct: 858 LYVRMLRDSVSPSSYTYSSLVKASSFASR--FGESLQAHIWKFGFGFHVKIQTTLIDFYS 915
Query: 265 NCGAMDLARELYD-------------------------------KLSSKHLVVSTAMLSG 293
G + AR+++D ++S K+ S +++G
Sbjct: 916 ATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLING 975
Query: 294 YAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM 353
Y G ++ A +F+Q+ KD++ W+ MI GY+++ + +EA+ +F +M I+PD++TM
Sbjct: 976 YMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTM 1035
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
+ ISACA++G L + +H Y +NGF + + +AL+DMY+KCG+L RA VF N+P+
Sbjct: 1036 STVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPK 1095
Query: 414 KNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKL 473
KN+ W+S+I A HG+A A+ +F +M+ E ++PN V F+ V AC+HAGLV+EG+++
Sbjct: 1096 KNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRI 1155
Query: 474 FSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
+ SMI+++ I EHYG MV L+ +A L+ +A+ELI +M F PN +IWG+L+ C++H
Sbjct: 1156 YRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHK 1215
Query: 534 EVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKE-KASSR 592
+ + E A +++ LEP + G +L ++YA++ RW DV IR M GI K +S
Sbjct: 1216 NLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSS 1275
Query: 593 VEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPST 635
+ I+ H+F AD+ H S E+ L+E+ ++ L Y T
Sbjct: 1276 IRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQET 1318
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 117/255 (45%), Gaps = 7/255 (2%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F+Q+P D +++ S++ + + ++ K+ G A +
Sbjct: 988 LFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGV 1047
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L +G E+H + GF D +I + L+ MYS C + A LVF + ++ WN +I+G
Sbjct: 1048 LEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEG 1107
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN-GLAL 251
G + LK++ +M+ KP+ V +V +AC H+G + G+ I+ ++D+ +
Sbjct: 1108 LAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVS 1167
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLS-SKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+ +V+++ G + A EL + + V+ A+L G H + A F++
Sbjct: 1168 NVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNK- 1226
Query: 311 VEKDLVCWSAMISGY 325
L+ M SGY
Sbjct: 1227 ----LMVLEPMNSGY 1237
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/462 (35%), Positives = 265/462 (57%), Gaps = 3/462 (0%)
Query: 158 LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPD 217
+++ Y ++ AR+VFD M RD V+WN M+ GY Q GN + L Y+E + S K +
Sbjct: 119 MVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN 178
Query: 218 GVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYD 277
+L+AC S L + H ++ G + L ++++ Y CG M+ A+ +D
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 278 KLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKL 337
+++ K + + T ++SGYAK G ++ A +F ++ EK+ V W+A+I+GY AL L
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 338 FNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAK 397
F +M + P+Q T S + A A++ +L + IH Y + + V ++LIDMY+K
Sbjct: 299 FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK 358
Query: 398 CGNLIRAKEVFENMPRK-NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIG 456
G+L ++ VF K + + W++MI+A A HG + A+ + M + ++PN +
Sbjct: 359 SGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVV 418
Query: 457 VLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFA 516
+L ACSH+GLVEEG + F SM +HGI P EHY C++DL RA ++ M IE MPF
Sbjct: 419 ILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFE 478
Query: 517 PNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIR 576
P+ IW +++ C++HG ELG+ AA ++++L+P+ ++LS+IYA +W V +R
Sbjct: 479 PDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLR 538
Query: 577 QSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSR--EIY 616
M + ++KEKA S +EI +V F ++D H +R EIY
Sbjct: 539 GVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIY 580
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 176/392 (44%), Gaps = 46/392 (11%)
Query: 220 ILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSA-LVNMYVNCGAMDLARELYDK 278
+L ++L CG + +L GK IH + G L S L+ MY+ CG A +++D+
Sbjct: 48 LLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQ 107
Query: 279 LSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLF 338
+ ++L M+SGY K GM+ AR +FD + E+D+V W+ M+ GYA+ EAL +
Sbjct: 108 MHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC 398
E + I ++ + ++AC L R H GF ++ ++ ++ID YAKC
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 227
Query: 399 GNLIRAKEVFE-------------------------------NMPRKNVISWSSMINAFA 427
G + AK F+ MP KN +SW+++I +
Sbjct: 228 GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 287
Query: 428 MHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
G N A++LF +M ++P F L A + + G+++ MI + + P
Sbjct: 288 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN-VRPNA 346
Query: 488 EHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQI-- 545
++D+Y ++ L + + + + W +++SA HG LG A + +
Sbjct: 347 IVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHG---LGHKALRMLDD 403
Query: 546 ---LELEPDHDGALVVL-----SNIYAKERRW 569
++P+ +V+L S + + RW
Sbjct: 404 MIKFRVQPNRTTLVVILNACSHSGLVEEGLRW 435
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 159/394 (40%), Gaps = 69/394 (17%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF +P D N ++ ++ L+ Y++ RR G A K+
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L L + HG GF S+ + +I Y+ C ++ A+ FD+M+ +D W +I G
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 193 YCQSGNYDQVLKLYEEMKTSD-------------------------------TKPDGVIL 221
Y + G+ + KL+ EM + KP+
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 222 CTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSS 281
+ L A +L +GK IH +++ + +A + S+L++MY G+++ + ++
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374
Query: 282 KH-LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNE 340
KH V M+S A+HG+ +AL++ ++
Sbjct: 375 KHDCVFWNTMISALAQHGL-------------------------------GHKALRMLDD 403
Query: 341 MQLRNIVPDQITMLSAISACANVGALAQA-RWIHTYADKNGFGRSLSVNNALIDMYAKCG 399
M + P++ T++ ++AC++ G + + RW + ++G LID+ + G
Sbjct: 404 MIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAG 463
Query: 400 ---NLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
L+R E P K++ W++++ +HG
Sbjct: 464 CFKELMRKIEEMPFEPDKHI--WNAILGVCRIHG 495
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 124/302 (41%), Gaps = 58/302 (19%)
Query: 320 AMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKN 379
+ +S +A + +A+ + + I + S + C + +L Q +WIH +
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 380 GFGRSLS-VNNALIDMYAKCGN-------------------------------LIRAKEV 407
GF R + ++N LI MY KCG L+RA+ V
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 408 FENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLV 467
F++MP ++V+SW++M+ +A G + A+ + + I+ N F G+L AC + +
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 468 E-----EGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIW 522
+ GQ L + ++ ++ ++D Y + + A + M ++ IW
Sbjct: 196 QLNRQAHGQVLVAGFLSNVVLS------CSIIDAYAKCGQMESAKRCFDEMT-VKDIHIW 248
Query: 523 GSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANK 582
+L+S G++E E ++ E P AL+ G +RQ N+
Sbjct: 249 TTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALI--------------AGYVRQGSGNR 294
Query: 583 GI 584
+
Sbjct: 295 AL 296
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 319 bits (817), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 191/642 (29%), Positives = 319/642 (49%), Gaps = 75/642 (11%)
Query: 125 KAVSKASALYLGLEIHG---LASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR 181
K + +S L +G IH + ++ D + LI +Y CR + AR +FD M R
Sbjct: 39 KVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPER 98
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTS-DTKPDGVILCTVLSACGHSGNLSYGKAI 240
+ V+W M+ GY SG +VLKL++ M S +++P+ + V +C +SG + GK
Sbjct: 99 NVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQF 158
Query: 241 HEFIMDNGLALSAHLQSALVNM-------------------------------YVNCGA- 268
H + GL +++ LV M Y+ CGA
Sbjct: 159 HGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAF 218
Query: 269 ---MDLARE------------------LYDKLSSKHLVVST-----------------AM 290
+D+ R+ L+ L +L + A+
Sbjct: 219 KEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGAL 278
Query: 291 LSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQ 350
++ Y K G V A+ +FD +++ + ++ Y + +EAL LF++M + + P++
Sbjct: 279 INMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNE 338
Query: 351 ITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFEN 410
T +++ A + L Q +H K+G+ + V NAL++MYAK G++ A++ F
Sbjct: 339 YTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSG 398
Query: 411 MPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEG 470
M +++++W++MI+ + HG A+ F RM PN + FIGVL ACSH G VE+G
Sbjct: 399 MTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQG 458
Query: 471 QKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQ 530
F+ ++ + + P +HY C+V L +A + + A + + + P +V+ W +L++AC
Sbjct: 459 LHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACY 518
Query: 531 VHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKAS 590
V LG+ A+ +E P+ G V+LSNI+AK R W V +R M N+G+ KE
Sbjct: 519 VRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGV 578
Query: 591 SRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXX 650
S + I N+ HVF+ D H + IY K++EV+S++K + Y+P +G
Sbjct: 579 SWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDN 638
Query: 651 XXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
+HSEKLA+ YGLI K ++S + + KN+RIC+DCHS +KL
Sbjct: 639 LSYHSEKLAVAYGLI-KTPEKSPLYVTKNVRICDDCHSAIKL 679
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 110/235 (46%), Gaps = 26/235 (11%)
Query: 310 IVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
++E+ L+ W + S +S + + NE+ + CAN L
Sbjct: 6 VIEQRLLKWDKLASLVPKSKKTPFPIDRLNEL---------------LKVCANSSYLRIG 50
Query: 370 RWIHTY---ADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAF 426
IH + +++ N+LI++Y KC +RA+++F+ MP +NV+SW +M+ +
Sbjct: 51 ESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGY 110
Query: 427 AMHGYANSAMNLFHRM-KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAP 485
G+ + LF M + PN + V +CS++G +EEG++ F ++G+
Sbjct: 111 QNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ-FHGCFLKYGLIS 169
Query: 486 RHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEF 540
+V +Y + +A+ +++ +P+ ++ ++ S +S G +E G F
Sbjct: 170 HEFVRNTLVYMYSLCSGNGEAIRVLDDLPYC-DLSVFSSALS-----GYLECGAF 218
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 318 bits (815), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 191/594 (32%), Positives = 312/594 (52%), Gaps = 33/594 (5%)
Query: 34 KQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLRLLS 93
K+IHA +L+S+ ++ + Q+ N D N L++
Sbjct: 304 KEIHASVLKSS-THSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 94 RSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPF 153
++ + L + + G A + S L G+E+H K G+ S+
Sbjct: 363 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 422
Query: 154 IQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD 213
+ LI MYS C F +M +D ++W +I GY Q+ + + L+L+ ++
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 214 TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAR 273
+ D +IL ++L A ++ K IH I+ GL L +Q+ LV++Y C M
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNM---- 537
Query: 274 ELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQE 333
GYA +F+ I KD+V W++MIS A + E
Sbjct: 538 -------------------GYATR--------VFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 334 ALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALID 393
A++LF M + D + +L +SA A++ AL + R IH Y + GF S+ A++D
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630
Query: 394 MYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVI 453
MYA CG+L AK VF+ + RK ++ ++SMINA+ MHG +A+ LF +M+ E++ P+ +
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690
Query: 454 FIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
F+ +LYACSHAGL++EG+ M +E+ + P EHY C+VD+ RAN + +A E ++ M
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 750
Query: 514 PFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVG 573
P +W +L++AC+ H E E+GE AA+++LELEP + G LV++SN++A++ RWNDV
Sbjct: 751 KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVE 810
Query: 574 LIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELK 627
+R M G+ K S +E++ +VH F D+ H +S+EIY+KL EV +L+
Sbjct: 811 KVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/515 (24%), Positives = 225/515 (43%), Gaps = 59/515 (11%)
Query: 32 QLKQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLRL 91
Q +Q+H++I ++ PS VF ++P+ N ++
Sbjct: 98 QGRQLHSRIFKTFPS-FELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGA 156
Query: 92 LSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSD 151
+ P + L LY +R G KA +K + G E+H L KLG+HS
Sbjct: 157 YVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHST 216
Query: 152 PFIQTGLIAMYSACRRIMDARLVFDKMSHR-DAVTWNIMIDGYCQSGNYDQVLKLYEEMK 210
FI L++MY+ + AR +FD + DAV WN ++ Y SG + L+L+ EM
Sbjct: 217 GFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 276
Query: 211 TSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA-HLQSALVNMYVNCGAM 269
+ P+ + + L+AC GK IH ++ + S ++ +AL+ MY CG M
Sbjct: 277 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKM 336
Query: 270 DLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESD 329
A + ++++ +V +++ GY ++ M K
Sbjct: 337 PQAERILRQMNNADVVTWNSLIKGYVQNLMYK---------------------------- 368
Query: 330 QPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNN 389
EAL+ F++M D+++M S I+A + L +H Y K+G+ +L V N
Sbjct: 369 ---EALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGN 425
Query: 390 ALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEP 449
LIDMY+KC F M K++ISW+++I +A + A+ LF + ++ +E
Sbjct: 426 TLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 450 NGVIFIGVLYACS-----------HAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYC 498
+ +I +L A S H ++ +G L ++I +VD+Y
Sbjct: 486 DEMILGSILRASSVLKSMLIVKEIHCHILRKG--LLDTVIQNE-----------LVDVYG 532
Query: 499 RANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
+ + A + ES+ +V+ W S++S+ ++G
Sbjct: 533 KCRNMGYATRVFESIK-GKDVVSWTSMISSSALNG 566
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 192/441 (43%), Gaps = 40/441 (9%)
Query: 129 KASALYLGLEIHGLASKL--GFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTW 186
K A+ G ++H K F D F+ L+ MY C + DA VFD+M R A W
Sbjct: 92 KRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAW 150
Query: 187 NIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMD 246
N MI Y +G L LY M+ +L AC ++ G +H ++
Sbjct: 151 NTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK 210
Query: 247 NGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFI 306
G + + +ALV+MY + AR L+D G+ + G
Sbjct: 211 LGYHSTGFIVNALVSMYAKNDDLSAARRLFD---------------GFQEKG-------- 247
Query: 307 FDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGAL 366
D V W++++S Y+ S + E L+LF EM + P+ T++SA++AC
Sbjct: 248 -------DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 367 AQARWIHTYADKNGFGRS-LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINA 425
+ IH K+ S L V NALI MY +CG + +A+ + M +V++W+S+I
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 426 FAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAP 485
+ + A+ F M + + V ++ A + G +L + +I +HG
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI-KHGWDS 419
Query: 486 RHEHYGCMVDLYCRANLL----RKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFA 541
+ ++D+Y + NL R + + + + +I G + C V +EL
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEA-LELFRDV 478
Query: 542 AKQILELEPDHDGALVVLSNI 562
AK+ +E++ G+++ S++
Sbjct: 479 AKKRMEIDEMILGSILRASSV 499
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 143/333 (42%), Gaps = 39/333 (11%)
Query: 199 YDQVL-KLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH-LQ 256
+D VL + ++ + S+ VL CG +S G+ +H I + L
Sbjct: 60 FDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLA 119
Query: 257 SALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV 316
LV MY CG++D DA +FD++ ++
Sbjct: 120 GKLVFMYGKCGSLD-------------------------------DAEKVFDEMPDRTAF 148
Query: 317 CWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYA 376
W+ MI Y + +P AL L+ M++ + + + + ACA + + +H+
Sbjct: 149 AWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLL 208
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMHGYANSA 435
K G+ + + NAL+ MYAK +L A+ +F+ K + + W+S++++++ G +
Sbjct: 209 VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLET 268
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC--M 493
+ LF M PN + L AC + G+++ +S++ E Y C +
Sbjct: 269 LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS--THSSELYVCNAL 326
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLM 526
+ +Y R + +A ++ M A +V+ W SL+
Sbjct: 327 IAMYTRCGKMPQAERILRQMNNA-DVVTWNSLI 358
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 318 bits (815), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 261/491 (53%), Gaps = 30/491 (6%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G +IHGL K + L MY+ C + AR VFD++ D +WN++I G
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
+G D+ + ++ +M++S PD + L ++L A LS G IH +I+ G +
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTV 408
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
++L+ MY C + Y + +D R D
Sbjct: 409 CNSLLTMYTFCSDL------------------------YCCFNLFEDFR------NNADS 438
Query: 316 VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTY 375
V W+ +++ + +QP E L+LF M + PD ITM + + C + +L +H Y
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498
Query: 376 ADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSA 435
+ K G + N LIDMYAKCG+L +A+ +F++M ++V+SWS++I +A G+ A
Sbjct: 499 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
+ LF MK IEPN V F+GVL ACSH GLVEEG KL+++M EHGI+P EH C+VD
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 618
Query: 496 LYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGA 555
L RA L +A I+ M P+V++W +L+SAC+ G V L + AA+ IL+++P + A
Sbjct: 619 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA 678
Query: 556 LVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREI 615
V+L +++A W + L+R SM + K S +EI +++H+F D +H + +I
Sbjct: 679 HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDI 738
Query: 616 YKKLEEVVSEL 626
Y L + S++
Sbjct: 739 YTVLHNIWSQM 749
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 199/437 (45%), Gaps = 49/437 (11%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVT 185
A S + +L G +IH D + +++MY C + DAR VFD M R+ V+
Sbjct: 76 ACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVS 135
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
+ +I GY Q+G + ++LY +M D PD +++ AC S ++ GK +H ++
Sbjct: 136 YTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI 195
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKL-SSKHLVVSTAMLSGYAKHGMVKDAR 304
KL SS HL+ A+++ Y + + DA
Sbjct: 196 --------------------------------KLESSSHLIAQNALIAMYVRFNQMSDAS 223
Query: 305 FIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIV-PDQITMLSAISACANV 363
+F I KDL+ WS++I+G+++ EAL EM + P++ S++ AC+++
Sbjct: 224 RVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSL 283
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMI 423
IH K+ + +L DMYA+CG L A+ VF+ + R + SW+ +I
Sbjct: 284 LRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVII 343
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
A +GYA+ A+++F +M+ P+ + +L A + + +G ++ S +I +
Sbjct: 344 AGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFL 403
Query: 484 APRH------EHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE-VE 536
A Y DLYC NL E + + W ++++AC H + VE
Sbjct: 404 ADLTVCNSLLTMYTFCSDLYCCFNLF-------EDFRNNADSVSWNTILTACLQHEQPVE 456
Query: 537 -LGEFAAKQILELEPDH 552
L F + E EPDH
Sbjct: 457 MLRLFKLMLVSECEPDH 473
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 201/441 (45%), Gaps = 39/441 (8%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
KA + +S + LG ++H KL S Q LIAMY ++ DA VF + +D +
Sbjct: 176 KACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLI 235
Query: 185 TWNIMIDGYCQSG-NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEF 243
+W+ +I G+ Q G ++ + L E + P+ I + L AC YG IH
Sbjct: 236 SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGL 295
Query: 244 IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDA 303
+ + LA +A +L +MY CG ++ AR ++D
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARRVFD-------------------------- 329
Query: 304 RFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV 363
QI D W+ +I+G A + EA+ +F++M+ +PD I++ S + A
Sbjct: 330 -----QIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKP 384
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNV--ISWSS 421
AL+Q IH+Y K GF L+V N+L+ MY C +L +FE+ R N +SW++
Sbjct: 385 MALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDF-RNNADSVSWNT 443
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
++ A H + LF M + EP+ + +L C ++ G ++ + +
Sbjct: 444 ILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL-KT 502
Query: 482 GIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMS--ACQVHGEVELGE 539
G+AP ++D+Y + L +A + +SM +V+ W +L+ A GE L
Sbjct: 503 GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLIVGYAQSGFGEEALIL 561
Query: 540 FAAKQILELEPDHDGALVVLS 560
F + +EP+H + VL+
Sbjct: 562 FKEMKSAGIEPNHVTFVGVLT 582
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 172/361 (47%), Gaps = 34/361 (9%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF QI PDT N ++ L+ + + ++ ++R G A +K A
Sbjct: 327 VFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMA 386
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVF-DKMSHRDAVTWNIMID 191
L G++IH K GF +D + L+ MY+ C + +F D ++ D+V+WN ++
Sbjct: 387 LSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILT 446
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
Q ++L+L++ M S+ +PD + + +L C +L G +H + + GLA
Sbjct: 447 ACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAP 506
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+++ L++MY CG++ AR ++D + ++ +V + ++ GYA+
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQ--------------- 551
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
SG+ E EAL LF EM+ I P+ +T + ++AC++VG + +
Sbjct: 552 -----------SGFGE-----EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLK 595
Query: 372 IH-TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMH 429
++ T ++G + + ++D+ A+ G L A+ + M +V+ W ++++A
Sbjct: 596 LYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQ 655
Query: 430 G 430
G
Sbjct: 656 G 656
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 166/355 (46%), Gaps = 47/355 (13%)
Query: 187 NIMIDGYCQSGNYDQVLKLYE-EMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
N I+ C+S Y + L+ ++ K S K +++ AC S +L+ G+ IH+ I+
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
++ NC YD + + H+ LS Y K G ++DAR
Sbjct: 95 NS-----------------NCK--------YDTILNNHI------LSMYGKCGSLRDARE 123
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA 365
+FD + E++LV ++++I+GY+++ Q EA++L+ +M ++VPDQ S I ACA+
Sbjct: 124 VFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSD 183
Query: 366 LAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINA 425
+ + +H K L NALI MY + + A VF +P K++ISWSS+I
Sbjct: 184 VGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAG 243
Query: 426 FAMHGYANSAMNLFHRMKEEDI-EPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
F+ G+ A++ M + PN IF L ACS + G ++ HG+
Sbjct: 244 FSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQI-------HGLC 296
Query: 485 PRHEHYG------CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
+ E G + D+Y R L A + + + P+ W +++ +G
Sbjct: 297 IKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNG 350
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 121/227 (53%), Gaps = 7/227 (3%)
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMI 190
S+L LG ++H + K G + FI+ GLI MY+ C + AR +FD M +RD V+W+ +I
Sbjct: 487 SSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI-MDNGL 249
GY QSG ++ L L++EMK++ +P+ V VL+AC H G + G ++ + ++G+
Sbjct: 547 VGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606
Query: 250 ALSAHLQSALVNMYVNCGAMDLARELYDKLS-SKHLVVSTAMLSGYAKHGMVKDARFIFD 308
+ + S +V++ G ++ A D++ +VV +LS G V A+ +
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAE 666
Query: 309 QIVEKDLVCWSA---MISGYAESDQPQEALKLFNEMQLRNI--VPDQ 350
I++ D +A + S +A S + A L + M+ ++ +P Q
Sbjct: 667 NILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQ 713
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 317 bits (813), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/557 (29%), Positives = 292/557 (52%), Gaps = 32/557 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++P N ++ + SR P L LY ++ KA
Sbjct: 72 VFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLV 131
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L G + A G+ +D F+ + ++ +Y C ++ +A ++F KM+ RD + W M+ G
Sbjct: 132 LEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTG 191
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
+ Q+G + ++ Y EM+ D V++ +L A G G+ G+++H ++ GL ++
Sbjct: 192 FAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMN 251
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
++++LV+MY AK G ++ A +F +++
Sbjct: 252 VVVETSLVDMY-------------------------------AKVGFIEVASRVFSRMMF 280
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
K V W ++ISG+A++ +A + EMQ PD +T++ + AC+ VG+L R +
Sbjct: 281 KTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLV 340
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H Y K ++ AL+DMY+KCG L ++E+FE++ RK+++ W++MI+ + +HG
Sbjct: 341 HCYILKRHVLDRVTAT-ALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNG 399
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
++LF +M E +IEP+ F +L A SH+GLVE+GQ FS MIN++ I P +HY C
Sbjct: 400 QEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVC 459
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
++DL RA + +A+++I S + IW +L+S C H + +G+ AA +IL+L PD
Sbjct: 460 LIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDS 519
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQS 612
G ++SN +A +W +V +R+ M N + K S +E+N E+ F+M D H +
Sbjct: 520 IGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEH 579
Query: 613 REIYKKLEEVVSELKLV 629
+ + L + +E++ V
Sbjct: 580 YHMLQVLRNLKTEIRDV 596
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 130/264 (49%), Gaps = 5/264 (1%)
Query: 286 VSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN 345
+S +++ + G + AR +FD++ ++ + +++MI Y+ P E L+L+++M
Sbjct: 52 ISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEK 111
Query: 346 IVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAK 405
I PD T I AC + L + + A G+ + V ++++++Y KCG + A+
Sbjct: 112 IQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAE 171
Query: 406 EVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAG 465
+F M +++VI W++M+ FA G + A+ + M+ E + V+ +G+L A G
Sbjct: 172 VLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLG 231
Query: 466 LVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSL 525
+ G+ + + G+ +VD+Y + + A + M F + WGSL
Sbjct: 232 DTKMGRSVHGYLYRT-GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMF-KTAVSWGSL 289
Query: 526 MSACQVHGEVELGEFAAKQILELE 549
+S +G L A + ++E++
Sbjct: 290 ISGFAQNG---LANKAFEAVVEMQ 310
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 346 IVPDQITMLSAISACANVGALAQARWIHTYADKNG-FGRSLSVNNALIDMYAKCGNLIRA 404
+ P +I L +IS IH + G S++ LI + G + A
Sbjct: 15 LCPKRIKFLQSISKLKR-----HITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYA 69
Query: 405 KEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHA 464
++VF+ +P++ V ++SMI ++ + + L+ +M E I+P+ F + AC
Sbjct: 70 RKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSG 129
Query: 465 GLVEEGQKLFSSMINEHGIAPRHEHYGC--MVDLYCRANLLRKAMELIESMPFAPNVIIW 522
++E+G+ ++ ++ +++ + C +++LY + + +A L M +VI W
Sbjct: 130 LVLEKGEAVWCKAVD---FGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMA-KRDVICW 185
Query: 523 GSLMSA 528
++++
Sbjct: 186 TTMVTG 191
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 291/557 (52%), Gaps = 33/557 (5%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
GL++HG K G P + LI YS + D+R F+ + + TW+ +I + Q
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
+ L+ ++M + +PD +L + +C G+++H M G +
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
S+LV+MY C G + AR +FD++ ++++
Sbjct: 154 GSSLVDMYAKC-------------------------------GEIVYARKMFDEMPQRNV 182
Query: 316 VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTY 375
V WS M+ GYA+ + +EAL LF E N+ + + S IS CAN L R IH
Sbjct: 183 VTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGL 242
Query: 376 ADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSA 435
+ K+ F S V ++L+ +Y+KCG A +VF +P KN+ W++M+ A+A H +
Sbjct: 243 SIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKV 302
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
+ LF RMK ++PN + F+ VL ACSHAGLV+EG+ F M E I P +HY +VD
Sbjct: 303 IELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVD 361
Query: 496 LYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGA 555
+ RA L++A+E+I +MP P +WG+L+++C VH EL FAA ++ EL P G
Sbjct: 362 MLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGM 421
Query: 556 LVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREI 615
+ LSN YA + R+ D R+ + ++G KE S VE N+VH F +R H++S+EI
Sbjct: 422 HISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEI 481
Query: 616 YKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIR 675
Y+KL E+ E++ Y TS +HSE+LA+ +GLI+ + IR
Sbjct: 482 YEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLIT-FPADRPIR 540
Query: 676 IVKNLRICEDCHSFMKL 692
++KNLR+C DCH+ +K
Sbjct: 541 VMKNLRVCGDCHNAIKF 557
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 147/296 (49%), Gaps = 32/296 (10%)
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
+G +H L+ K G+ +D F+ + L+ MY+ C I+ AR +FD+M R+ VTW+ M+ GY
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
Q G ++ L L++E + + +V+S C +S L G+ IH + + S+
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
+ S+LV++Y CG + A ++++++ K+L + AML YA+H
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHS---------------- 297
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
Q+ ++LF M+L + P+ IT L+ ++AC++ G + + R+
Sbjct: 298 ---------------HTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFD 342
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMINAFAMH 429
++ + +L+DM + G L A EV NMP S W +++ + +H
Sbjct: 343 QMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVH 398
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 4/213 (1%)
Query: 128 SKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWN 187
+ ++ L LG +IHGL+ K F S F+ + L+++YS C A VF+++ ++ WN
Sbjct: 228 ANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWN 287
Query: 188 IMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN 247
M+ Y Q + +V++L++ MK S KP+ + VL+AC H+G + G+ + + ++
Sbjct: 288 AMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKES 347
Query: 248 GLALSAHLQSALVNMYVNCGAMDLARELYDKLS-SKHLVVSTAMLSGYAKHGMVKDARFI 306
+ + ++LV+M G + A E+ + V A+L+ H + A F
Sbjct: 348 RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFA 407
Query: 307 FDQIVEKDLVCWSAMIS---GYAESDQPQEALK 336
D++ E V IS YA + ++A K
Sbjct: 408 ADKVFELGPVSSGMHISLSNAYAADGRFEDAAK 440
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 271/461 (58%), Gaps = 3/461 (0%)
Query: 171 ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGH 230
AR +FD + +N +I Y + + LY + +P + +A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 231 SGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAM 290
+ + +H +G + + L+ Y GA+ AR ++D++S + + V AM
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 291 LSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL-RNIVPD 349
++GY + G +K A +FD + K++ W+ +ISG++++ EALK+F M+ +++ P+
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 350 QITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFE 409
IT++S + ACAN+G L R + YA +NGF ++ V NA I+MY+KCG + AK +FE
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 410 NMP-RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVE 468
+ ++N+ SW+SMI + A HG + A+ LF +M E +P+ V F+G+L AC H G+V
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVV 334
Query: 469 EGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
+GQ+LF SM H I+P+ EHYGCM+DL R L++A +LI++MP P+ ++WG+L+ A
Sbjct: 335 KGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
Query: 529 CQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEK 588
C HG VE+ E A++ + +LEP + G V++SNIYA +W+ V +R+ M + ++K
Sbjct: 395 CSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAA 454
Query: 589 ASSR-VEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKL 628
S VE+ +VH F + D+ H +S EIY+ LEE+ +KL
Sbjct: 455 GYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKL 495
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 155/360 (43%), Gaps = 71/360 (19%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGY----- 193
+H + GF SD F T LI Y+ + AR VFD+MS RD WN MI GY
Sbjct: 104 LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGD 163
Query: 194 --------------------------CQSGNYDQVLKLYEEM-KTSDTKPDGVILCTVLS 226
Q+GNY + LK++ M K KP+ + + +VL
Sbjct: 164 MKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLP 223
Query: 227 ACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVV 286
AC + G L G+ + + +NG + ++ +A + MY CG +D+A+ L+++L +
Sbjct: 224 ACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGN----- 278
Query: 287 STAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI 346
+++L W++MI A + EAL LF +M
Sbjct: 279 -------------------------QRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGE 313
Query: 347 VPDQITMLSAISACANVGALAQARWIHTYADK-NGFGRSLSVNNALIDMYAKCGNLIRAK 405
PD +T + + AC + G + + + + ++ + L +ID+ + G L A
Sbjct: 314 KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAY 373
Query: 406 EVFENMPRK-NVISWSSMINAFAMHGYAN----SAMNLFHRMKEEDIEPNGVIFIGVLYA 460
++ + MP K + + W +++ A + HG ++ LF K E P + + +YA
Sbjct: 374 DLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALF---KLEPTNPGNCVIMSNIYA 430
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 263/489 (53%), Gaps = 33/489 (6%)
Query: 128 SKASALYLGL--EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVT 185
S A+ +Y+GL +IH + K G + L+ MYS C + +A +FD R+++T
Sbjct: 230 SLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSIT 289
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
W+ M+ GY Q+G + +KL+ M ++ KP + VL+AC L GK +H F++
Sbjct: 290 WSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL 349
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
G +HL +TA++ YAK G + DAR
Sbjct: 350 KLGF-------------------------------ERHLFATTALVDMYAKAGCLADARK 378
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA 365
FD + E+D+ W+++ISGY ++ +EAL L+ M+ I+P+ TM S + AC+++
Sbjct: 379 GFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT 438
Query: 366 LAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINA 425
L + +H + K+GFG + + +AL MY+KCG+L VF P K+V+SW++MI+
Sbjct: 439 LELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISG 498
Query: 426 FAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAP 485
+ +G + A+ LF M E +EP+ V F+ ++ ACSH G VE G F+ M ++ G+ P
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDP 558
Query: 486 RHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQI 545
+ +HY CMVDL RA L++A E IES + +W L+SAC+ HG+ ELG +A +++
Sbjct: 559 KVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKL 618
Query: 546 LELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMA 605
+ L V LS IY R DV + + M G+SKE S +E+ N+ HVF++
Sbjct: 619 MALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVG 678
Query: 606 DRYHKQSRE 614
D H E
Sbjct: 679 DTMHPMIEE 687
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 139/573 (24%), Positives = 247/573 (43%), Gaps = 54/573 (9%)
Query: 10 HTPLPLPQLNHXXXXXXXXXXXQLKQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXX 69
HT L +L H + +H QI+R+ S
Sbjct: 13 HTSTLLKKLTHHSQQRNLVAG---RAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 70 XXXVFSQIPNPDTHFCNQLLRLLSRS---PTPQNTLFLYQKLRRVGXXXXXXXXXXXXKA 126
+F+ I D N L+ S++ + + L++++R KA
Sbjct: 70 S--IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 127 VSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTW 186
S + +G + H L K+ D ++ T L+ MY + D VF M R+ TW
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTW 187
Query: 187 NIMIDGYCQSGNYDQVLKLY-----EEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
+ M+ GY G ++ +K++ E+ + SD+ + VLS+ + + G+ IH
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD---YVFTAVLSSLAATIYVGLGRQIH 244
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVK 301
+ NGL L +ALV MY C +++ A ++
Sbjct: 245 CITIKNGLLGFVALSNALVTMYSKCESLNEACKM-------------------------- 278
Query: 302 DARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACA 361
FD +++ + WSAM++GY+++ + EA+KLF+ M I P + T++ ++AC+
Sbjct: 279 -----FDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACS 333
Query: 362 NVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSS 421
++ L + + +H++ K GF R L AL+DMYAK G L A++ F+ + ++V W+S
Sbjct: 334 DICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTS 393
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
+I+ + + A+ L+ RMK I PN VL ACS +E G+++ I +H
Sbjct: 394 LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI-KH 452
Query: 482 GIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEV-ELGEF 540
G + +Y + L + P +V+ W +++S +G+ E E
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP-NKDVVSWNAMISGLSHNGQGDEALEL 511
Query: 541 AAKQILE-LEPDHDGALVVLSNIYAK---ERRW 569
+ + E +EPD + ++S K ER W
Sbjct: 512 FEEMLAEGMEPDDVTFVNIISACSHKGFVERGW 544
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 146/330 (44%), Gaps = 35/330 (10%)
Query: 104 LYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYS 163
L+ ++ G A S L G ++H KLGF F T L+ MY+
Sbjct: 309 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYA 368
Query: 164 ACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCT 223
+ DAR FD + RD W +I GY Q+ + ++ L LY MKT+ P+ + +
Sbjct: 369 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS 428
Query: 224 VLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKH 283
VL AC L GK +H + +G L + SAL MY CG+++ ++ + +K
Sbjct: 429 VLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 488
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL 343
+V AM+SG + +G Q EAL+LF EM
Sbjct: 489 VVSWNAMISGLSHNG-------------------------------QGDEALELFEEMLA 517
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIH--TYADKNGFGRSLSVNNALIDMYAKCGNL 401
+ PD +T ++ ISAC++ G + + W + +D+ G + ++D+ ++ G L
Sbjct: 518 EGMEPDDVTFVNIISACSHKGFVERG-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQL 576
Query: 402 IRAKEVFENMPRKNVIS-WSSMINAFAMHG 430
AKE E+ + + W +++A HG
Sbjct: 577 KEAKEFIESANIDHGLCLWRILLSACKNHG 606
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 2/227 (0%)
Query: 74 FSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASAL 133
F + D L+ ++ + L LY++++ G KA S + L
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 134 YLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGY 193
LG ++HG K GF + I + L MYS C + D LVF + ++D V+WN MI G
Sbjct: 440 ELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGL 499
Query: 194 CQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN-GLALS 252
+G D+ L+L+EEM +PD V ++SAC H G + G + D GL
Sbjct: 500 SHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPK 559
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKH-LVVSTAMLSGYAKHG 298
+ +V++ G + A+E + + H L + +LS HG
Sbjct: 560 VDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 348 PDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEV 407
P T+L ++ + L R +H + G + N L++ YAKCG L +A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 408 FENMPRKNVISWSSMINAFAMHGYANSA---MNLFHRMKEEDIEPNGVIFIGVLYACSHA 464
F + K+V+SW+S+I ++ +G +S+ M LF M+ +DI PN G+ A S
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES-- 129
Query: 465 GLVEEGQKLFSSMINE--HGIAPRHEHYG------CMVDLYCRANLLRKAMELIESMPFA 516
L SS + H + + +G +V +YC+A L+ +++ MP
Sbjct: 130 -------SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-E 181
Query: 517 PNVIIWGSLMSACQVHGEVE 536
N W +++S G VE
Sbjct: 182 RNTYTWSTMVSGYATRGRVE 201
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/458 (36%), Positives = 260/458 (56%), Gaps = 7/458 (1%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G +IH K GF D I L+ ++ C + AR VFD++ +N MI GY +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNL-----SYGKAIHEFIMDNGLA 250
G ++L L + M S K DG L VL A G+ S + +H I+ +
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
L L +ALV+ YV G ++ AR +++ + +++V T+M+SGY G V+DA IF+
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 311 VEKDLVCWSAMISGYAES-DQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
KD+V ++AM+ G++ S + + ++ ++ MQ P+ T S I AC+ + +
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
+ +H K+G + + ++L+DMYAKCG + A+ VF+ M KNV SW+SMI+ + +
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
G A+ LF RMKE IEPN V F+G L ACSH+GLV++G ++F SM ++ + P+ EH
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
Y C+VDL RA L KA E +MP P+ IW +L+S+C +HG VEL AA ++ +L
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLN 472
Query: 550 PD-HDGALVVLSNIYAKERRWNDVGLIRQSMANKGISK 586
D GA + LSN+YA +W++V IR+ M + ISK
Sbjct: 473 ADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISK 510
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 132/284 (46%), Gaps = 13/284 (4%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRS-PTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKAS 131
+F+ D N ++ SRS T + ++ +Y ++R G A S +
Sbjct: 228 IFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
+ +G ++H K G ++ + + L+ MY+ C I DAR VFD+M ++ +W MID
Sbjct: 288 SHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMID 347
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM-DNGLA 250
GY ++GN ++ L+L+ MK +P+ V LSAC HSG + G I E + D +
Sbjct: 348 GYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMK 407
Query: 251 LSAHLQSALVNMYVNCG----AMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF- 305
+ +V++ G A + AR + ++ S + A+LS HG V+ A
Sbjct: 408 PKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSD---IWAALLSSCNLHGNVELASIA 464
Query: 306 ---IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI 346
+F +K + A+ + YA +D+ K+ M+ R I
Sbjct: 465 ASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRI 508
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 5/182 (2%)
Query: 362 NVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSS 421
N A + IH K GF L+++ L+ ++ KCG L A++VF+ +P+ + +++
Sbjct: 46 NSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNY 105
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAG----LVEEGQKLFSSM 477
MI+ + HG + L RM + +G VL A + G L +L +
Sbjct: 106 MISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHAR 165
Query: 478 INEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVEL 537
I + + +VD Y ++ L A + E+M NV+ S++S G VE
Sbjct: 166 IIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK-DENVVCCTSMISGYMNQGFVED 224
Query: 538 GE 539
E
Sbjct: 225 AE 226
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 287/556 (51%), Gaps = 33/556 (5%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
E+H + K F + + +A Y+ C + A+ VF + + +WN +I G+ QS
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 198 NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
+ L + +MK S PD +C++LSAC +L GK +H FI+ N L +
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC 317
+++++Y++CG + + L FD + +K LV
Sbjct: 536 SVLSLYIHCGELCTVQAL-------------------------------FDAMEDKSLVS 564
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
W+ +I+GY ++ P AL +F +M L I I+M+ AC+ + +L R H YA
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
K+ + +LIDMYAK G++ ++ +VF + K+ SW++MI + +HG A A+
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLY 497
LF M+ P+ + F+GVL AC+H+GL+ EG + M + G+ P +HY C++D+
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 744
Query: 498 CRANLLRKAMELI-ESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGAL 556
RA L KA+ ++ E M +V IW SL+S+C++H +E+GE A ++ ELEP+
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENY 804
Query: 557 VVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIY 616
V+LSN+YA +W DV +RQ M + K+ S +E+N +V F++ +R+ EI
Sbjct: 805 VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIK 864
Query: 617 KKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRI 676
+ ++ + Y P T HSEKLAL YGLI K + + IR+
Sbjct: 865 SLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLI-KTSEGTTIRV 923
Query: 677 VKNLRICEDCHSFMKL 692
KNLRIC DCH+ KL
Sbjct: 924 YKNLRICVDCHNAAKL 939
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 173/357 (48%), Gaps = 39/357 (10%)
Query: 125 KAVSKASALYLGLEIHGLAS-KLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDA 183
+A K + +G +IH L S +D + T +I MY+ C D+R VFD + ++
Sbjct: 92 QASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNL 151
Query: 184 VTWNIMIDGYCQSGNYDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE 242
WN +I Y ++ YD+VL+ + EM T+D PD V+ AC ++ G A+H
Sbjct: 152 FQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHG 211
Query: 243 FIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKD 302
++ GL + + V A++S Y HG V D
Sbjct: 212 LVVKTGLV-------------------------------EDVFVGNALVSFYGTHGFVTD 240
Query: 303 ARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN----IVPDQITMLSAIS 358
A +FD + E++LV W++MI ++++ +E+ L EM N +PD T+++ +
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 300
Query: 359 ACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS 418
CA + + +H +A K + L +NNAL+DMY+KCG + A+ +F+ KNV+S
Sbjct: 301 VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360
Query: 419 WSSMINAFAMHGYANSAMNLFHRM--KEEDIEPNGVIFIGVLYACSHAGLVEEGQKL 473
W++M+ F+ G + ++ +M ED++ + V + + C H + ++L
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 161/360 (44%), Gaps = 37/360 (10%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
KA + S + +GL +HGL K G D F+ L++ Y + DA +FD M R+ V
Sbjct: 195 KACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLV 254
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTK----PDGVILCTVLSACGHSGNLSYGKAI 240
+WN MI + +G ++ L EM + PD L TVL C + GK +
Sbjct: 255 SWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV 314
Query: 241 HEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMV 300
H G A+ L K LV++ A++ Y+K G +
Sbjct: 315 H------GWAVKLRLD-------------------------KELVLNNALMDMYSKCGCI 343
Query: 301 KDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL--RNIVPDQITMLSAIS 358
+A+ IF K++V W+ M+ G++ + +M ++ D++T+L+A+
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Query: 359 ACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS 418
C + L + +H Y+ K F + V NA + YAKCG+L A+ VF + K V S
Sbjct: 404 VCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS 463
Query: 419 WSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI 478
W+++I A +++ +MK + P+ +L ACS + G+++ +I
Sbjct: 464 WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII 523
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 173/392 (44%), Gaps = 35/392 (8%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF I + + N L+ ++S P+ +L + +++ G A SK +
Sbjct: 452 VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKS 511
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L LG E+HG + D F+ ++++Y C + + +FD M + V+WN +I G
Sbjct: 512 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITG 571
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y Q+G D+ L ++ +M + G+ + V AC +L G+ H + + + L
Sbjct: 572 YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDD 631
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
A + +L++MY G++ + ++++ L K AM+ GY HG+ K
Sbjct: 632 AFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK----------- 680
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA-RW 371
EA+KLF EMQ PD +T L ++AC + G + + R+
Sbjct: 681 --------------------EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 720
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRA-KEVFENMPRK-NVISWSSMINAFAMH 429
+ G +L +IDM + G L +A + V E M + +V W S++++ +H
Sbjct: 721 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 780
Query: 430 GYANSAMNLFHRMKE-EDIEPNGVIFIGVLYA 460
+ ++ E E +P + + LYA
Sbjct: 781 QNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 812
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/517 (32%), Positives = 271/517 (52%), Gaps = 43/517 (8%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXX-XXXKAVSKAS 131
VF ++P+P T+ N L++ S T+ + ++ R G K S
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
+ +G +HGL ++GF D + T + Y C+ + AR VF +M R+AV+W ++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
Y +SG ++ +++ M +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGS----------------------------------- 209
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ALV+ V G + A++L+D++ + ++ T+M+ GYAK G + AR +F++
Sbjct: 210 ----WNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEAR 265
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
D+ WSA+I GYA++ QP EA K+F+EM +N+ PD+ M+ +SAC+ +G
Sbjct: 266 GVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEK 325
Query: 372 IHTYADK--NGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
+ +Y + N F S V ALIDM AKCG++ RA ++FE MP+++++S+ SM+ A+H
Sbjct: 326 VDSYLHQRMNKFS-SHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIH 384
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
G + A+ LF +M +E I P+ V F +L C + LVEEG + F M ++ I +H
Sbjct: 385 GCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDH 444
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
Y C+V+L R L++A ELI+SMPF + WGSL+ C +HG E+ E A+ + ELE
Sbjct: 445 YSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELE 504
Query: 550 PDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISK 586
P G+ V+LSNIYA RW DV +R M GI+K
Sbjct: 505 PQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/589 (31%), Positives = 293/589 (49%), Gaps = 68/589 (11%)
Query: 105 YQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSA 164
++ LRR G A + SA +G+++H K GF ++ ++Q+ LI MY+
Sbjct: 215 FRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAK 274
Query: 165 CRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTV 224
CR + AR + + M D V+WN MI G + G + L ++ M D K D + ++
Sbjct: 275 CREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSI 334
Query: 225 LSACGHS-GNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKH 283
L+ S + + H I+ G A + +ALV+MY
Sbjct: 335 LNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMY-------------------- 374
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL 343
AK G++ A +F+ ++EKD++ W+A+++G + EALKLF M++
Sbjct: 375 -----------AKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRV 423
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR 403
I PD+I S +SA A + L + +H K+GF SLSVNN+L+ MY KCG+L
Sbjct: 424 GGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLED 483
Query: 404 AKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
A +F +M +++I+W+ +I +A +G
Sbjct: 484 ANVIFNSMEIRDLITWTCLIVGYAKNG--------------------------------- 510
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWG 523
L+E+ Q+ F SM +GI P EHY CM+DL+ R+ K +L+ M P+ +W
Sbjct: 511 --LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWK 568
Query: 524 SLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKG 583
++++A + HG +E GE AAK ++ELEP++ V LSN+Y+ R ++ +R+ M ++
Sbjct: 569 AILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRN 628
Query: 584 ISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXX 643
ISKE S VE +VH FM DR H + EIY K++E++ +K Y S
Sbjct: 629 ISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLD 688
Query: 644 XXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
+HSEKLA+ +GL+ IRI+KNLR+C DCHS MKL
Sbjct: 689 KEGKELGLAYHSEKLAVAFGLLVVPSGAP-IRIIKNLRVCGDCHSAMKL 736
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 197/417 (47%), Gaps = 43/417 (10%)
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMK 210
D F +I YS RR+ DA +F ++ ++WN +I GYC+SG+ + L+ EM+
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 211 TSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMD 270
+ KP+ L +VL C L G+ IH + G L ++ + L+ MY C +
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 271 LARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQ 330
A L++ + EK+ V W++M++GY+++
Sbjct: 178 EAEYLFETMEG------------------------------EKNNVTWTSMLTGYSQNGF 207
Query: 331 PQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNA 390
+A++ F +++ +Q T S ++ACA+V A +H K+GF ++ V +A
Sbjct: 208 AFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSA 267
Query: 391 LIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPN 450
LIDMYAKC + A+ + E M +V+SW+SMI G A+++F RM E D++ +
Sbjct: 268 LIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKID 327
Query: 451 GVIFIGVL--YACSHAGLVEEGQKLFSS---MINEHGIAPRHEHYGCMVDLYCRANLLRK 505
+L +A S + K+ SS +I + G A +VD+Y + ++
Sbjct: 328 DFTIPSILNCFALSRTEM-----KIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDS 382
Query: 506 AMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFAAKQILELEPDHDGALVVLS 560
A+++ E M +VI W +L++ +G + L F ++ + PD VLS
Sbjct: 383 ALKVFEGM-IEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLS 438
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 292/569 (51%), Gaps = 42/569 (7%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
K++ AL G +IH + G S+ I+TG++ MY C ++ A+ VFD+M+ + V
Sbjct: 192 KSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPV 251
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
++ GY Q+G LKL+ ++ T + D + VL AC L+ GK IH +
Sbjct: 252 ACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACV 311
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDAR 304
GL + + LV+ Y+ C + + A + ++ + V +A++S
Sbjct: 312 AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS------------ 359
Query: 305 FIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI-VPDQITMLSAISACANV 363
GY + Q +EA+K F ++ +N + + T S AC+ +
Sbjct: 360 -------------------GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVL 400
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMI 423
+H A K S +ALI MY+KCG L A EVFE+M ++++W++ I
Sbjct: 401 ADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFI 460
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
+ A +G A+ A+ LF +M ++PN V FI VL ACSHAGLVE+G+ +M+ ++ +
Sbjct: 461 SGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNV 520
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAK 543
AP +HY CM+D+Y R+ LL +A++ +++MPF P+ + W +S C H +ELGE A +
Sbjct: 521 APTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGE 580
Query: 544 QILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFM 603
++ +L+P+ V+ N+Y +W + + + M + + KE + S ++ ++H F+
Sbjct: 581 ELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFI 640
Query: 604 MADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYG 663
+ D++H Q++EIY+KL+E + G HSE+LA+ +G
Sbjct: 641 VGDKHHPQTQEIYEKLKE---------FDGFMEGDMFQCNMTERREQLLDHSERLAIAFG 691
Query: 664 LISKR-RKESCIRIVKNLRICEDCHSFMK 691
LIS + I++ KNLR C DCH F K
Sbjct: 692 LISVHGNAPAPIKVFKNLRACPDCHEFAK 720
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 171/382 (44%), Gaps = 34/382 (8%)
Query: 153 FIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTS 212
+Q ++ MY CR + DA +FD+MS +AV+ MI Y + G D+ + L+ M S
Sbjct: 119 LLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLAS 178
Query: 213 DTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLA 272
KP + T+L + + L +G+ IH ++ GL + +++ +VNMYV CG + A
Sbjct: 179 GDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGA 238
Query: 273 RELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQ 332
+ ++D+++ K V T ++ GY + G +D
Sbjct: 239 KRVFDQMAVKKPVACTGLMVGYTQAGRARD------------------------------ 268
Query: 333 EALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALI 392
ALKLF ++ + D + ACA++ L + IH K G +SV L+
Sbjct: 269 -ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLV 327
Query: 393 DMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEP-NG 451
D Y KC + A F+ + N +SWS++I+ + A+ F ++ ++ N
Sbjct: 328 DFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNS 387
Query: 452 VIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIE 511
+ + ACS G ++ + I I ++ ++ +Y + L A E+ E
Sbjct: 388 FTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE-SALITMYSKCGCLDDANEVFE 446
Query: 512 SMPFAPNVIIWGSLMSACQVHG 533
SM P+++ W + +S +G
Sbjct: 447 SMD-NPDIVAWTAFISGHAYYG 467
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 160/360 (44%), Gaps = 34/360 (9%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF Q+ C L+ +++ ++ L L+ L G KA +
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE 300
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L LG +IH +KLG S+ + T L+ Y C A F ++ + V+W+ +I G
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKP-DGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
YCQ +++ +K ++ +++ + + ++ AC + + G +H + L
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
S + +SAL+ MY CG +D A E+++ + + +V TA +SG+A +G
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYG------------- 467
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR- 370
EAL+LF +M + P+ +T ++ ++AC++ G + Q +
Sbjct: 468 ------------------NASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKH 509
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMH 429
+ T K ++ + +ID+YA+ G L A + +NMP + +SW ++ H
Sbjct: 510 CLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTH 569
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 161/356 (45%), Gaps = 34/356 (9%)
Query: 177 KMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSY 236
K+SH+ N+ + + ++ + +EM + + AC +LS+
Sbjct: 42 KISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH 101
Query: 237 GKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAK 296
G+ +H+ + S LQ+ ++ MY C +++ A +L+D++S + V T M+S YA+
Sbjct: 102 GRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAE 161
Query: 297 HGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSA 356
G++ A +F S M+ A D+P ++ T+L +
Sbjct: 162 QGILDKAVGLF-----------SGML---ASGDKPPSSM--------------YTTLLKS 193
Query: 357 ISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNV 416
+ N AL R IH + + G + S+ +++MY KCG L+ AK VF+ M K
Sbjct: 194 L---VNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP 250
Query: 417 ISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSS 476
++ + ++ + G A A+ LF + E +E + +F VL AC+ + G+++ +
Sbjct: 251 VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHAC 310
Query: 477 MINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA-CQV 531
+ + G+ +VD Y + + A + + PN + W +++S CQ+
Sbjct: 311 -VAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISGYCQM 364
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 195/623 (31%), Positives = 310/623 (49%), Gaps = 34/623 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF + + D+ N ++ L ++ + Y+ +RR + +
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
LG +IHG + KLG + + L+ +Y+ + + R +F M D V+WN +I
Sbjct: 431 AKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490
Query: 193 YCQSG-NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
+S + + + + + + K + + +VLSA GK IH + N +A
Sbjct: 491 LARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIAD 550
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
A ++AL+ Y CG MD +++ +++ +
Sbjct: 551 EATTENALIACYGKCGEMDGCEKIFSRMAER----------------------------- 581
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
+D V W++MISGY ++ +AL L M D + +SA A+V L +
Sbjct: 582 -RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGME 640
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
+H + + + V +AL+DMY+KCG L A F MP +N SW+SMI+ +A HG
Sbjct: 641 VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQ 700
Query: 432 ANSAMNLFHRMK-EEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY 490
A+ LF MK + P+ V F+GVL ACSHAGL+EEG K F SM + +G+APR EH+
Sbjct: 701 GEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHF 760
Query: 491 GCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA-CQVHG-EVELGEFAAKQILEL 548
CM D+ RA L K + IE MP PNV+IW +++ A C+ +G + ELG+ AA+ + +L
Sbjct: 761 SCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQL 820
Query: 549 EPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRY 608
EP++ V+L N+YA RW D+ R+ M + + KE S V + + VH+F+ D+
Sbjct: 821 EPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKS 880
Query: 609 HKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKR 668
H + IYKKL+E+ +++ Y P T +HSEKLA+ + L ++R
Sbjct: 881 HPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQR 940
Query: 669 RKESCIRIVKNLRICEDCHSFMK 691
IRI+KNLR+C DCHS K
Sbjct: 941 SSTLPIRIMKNLRVCGDCHSAFK 963
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 147/288 (51%), Gaps = 36/288 (12%)
Query: 145 KLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLK 204
K G +D F+ +GL++ ++ + AR VF++M R+AVT N ++ G + ++ K
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295
Query: 205 LYEEMKTS-DTKPDG-VILCTVLS--ACGHSGNLSYGKAIHEFIMDNGLA-LSAHLQSAL 259
L+ +M + D P+ VIL + + L G+ +H ++ GL + + L
Sbjct: 296 LFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGL 355
Query: 260 VNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWS 319
VNMY CG+ + DAR +F + +KD V W+
Sbjct: 356 VNMYAKCGS-------------------------------IADARRVFYFMTDKDSVSWN 384
Query: 320 AMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKN 379
+MI+G ++ EA++ + M+ +I+P T++S++S+CA++ + IH + K
Sbjct: 385 SMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL 444
Query: 380 GFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFA 427
G ++SV+NAL+ +YA+ G L +++F +MP + +SW+S+I A A
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 182/406 (44%), Gaps = 43/406 (10%)
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSAC-RRIMDARLVFDKMSHRDAVTWNIMI 190
+ G +IHGL KL + D + LI+MY C + A F + +++V+WN +I
Sbjct: 119 GILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSII 178
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCT-VLSACGHS-GNLSYGKAIHEFIMDNG 248
Y Q+G+ +++ M+ ++P + V +AC + ++ + I I +G
Sbjct: 179 SVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSG 238
Query: 249 LALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFD 308
L + S LV+ + G++ AR++++++ +++ V ++ G +
Sbjct: 239 LLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQK---------- 288
Query: 309 QIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQ-LRNIVPDQ-ITMLSAI---SACANV 363
W +EA KLF +M + ++ P+ + +LS+ S V
Sbjct: 289 ---------WG------------EEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEV 327
Query: 364 GALAQARWIHTYADKNGF-GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSM 422
G L + R +H + G + + N L++MYAKCG++ A+ VF M K+ +SW+SM
Sbjct: 328 G-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSM 386
Query: 423 INAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHG 482
I +G A+ + M+ DI P I L +C+ + GQ++ + + G
Sbjct: 387 ITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL-KLG 445
Query: 483 IAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
I ++ LY L + ++ SMP + + W S++ A
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
Query: 275 LYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEA 334
LY K + + +++ Y + G AR +FD++ ++ V W+ ++SGY+ + + +EA
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 335 LKLFNEMQLRNIVPDQITMLSAISACANVGALAQ--ARWIHTYADKNGFGRSLSVNNALI 392
L +M I +Q +S + AC +G++ R IH K + V+N LI
Sbjct: 87 LVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLI 146
Query: 393 DMYAKC-GNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNG 451
MY KC G++ A F ++ KN +SW+S+I+ ++ G SA +F M+ + P
Sbjct: 147 SMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTE 206
Query: 452 VIFIG-VLYACS 462
F V ACS
Sbjct: 207 YTFGSLVTTACS 218
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
Query: 343 LRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLI 402
+ N VP LS + +C VG AR+ H+ KN + + + N LI+ Y + G+ +
Sbjct: 1 MTNCVP-----LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSV 53
Query: 403 RAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACS 462
A++VF+ MP +N +SW+ +++ ++ +G A+ M +E I N F+ VL AC
Sbjct: 54 SARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQ 113
Query: 463 HAGLV 467
G V
Sbjct: 114 EIGSV 118
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 168/486 (34%), Positives = 275/486 (56%), Gaps = 3/486 (0%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMD-ARLVFDKMSHRDAVTWNIMIDGYCQS 196
+IH K G SD + ++A A M+ A LVF +++H++ WN +I G+ +S
Sbjct: 43 QIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRS 102
Query: 197 GNYDQVLKLYEEMKTSD--TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
+ + ++ +M S KP + +V A G G G+ +H ++ GL +
Sbjct: 103 SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSF 162
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
+++ +++MYV CG + A ++ + +V +M+ G+AK G++ A+ +FD++ +++
Sbjct: 163 IRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRN 222
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
V W++MISG+ + + ++AL +F EMQ +++ PD TM+S ++ACA +GA Q RWIH
Sbjct: 223 GVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHE 282
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
Y +N F + V ALIDMY KCG + VFE P+K + W+SMI A +G+
Sbjct: 283 YIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEER 342
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV 494
AM+LF ++ +EP+ V FIGVL AC+H+G V + F M ++ I P +HY MV
Sbjct: 343 AMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMV 402
Query: 495 DLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDG 554
++ A LL +A LI++MP + +IW SL+SAC+ G VE+ + AAK + +L+PD
Sbjct: 403 NVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETC 462
Query: 555 ALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSRE 614
V+LSN YA + + R M + + KE S +E++ EVH F+ H +S E
Sbjct: 463 GYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAE 522
Query: 615 IYKKLE 620
IY L+
Sbjct: 523 IYSLLD 528
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 196/475 (41%), Gaps = 70/475 (14%)
Query: 32 QLKQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLRL 91
+LKQIHA ++++ + VF++I + + N ++R
Sbjct: 40 ELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYL-VFTRINHKNPFVWNTIIRG 98
Query: 92 LSRSPTPQN--TLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFH 149
SRS P+ ++F+ KA + G ++HG+ K G
Sbjct: 99 FSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLE 158
Query: 150 SDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQ-------- 201
D FI+ ++ MY C +++A +F M D V WN MI G+ + G DQ
Sbjct: 159 DDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEM 218
Query: 202 -----------------------VLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGK 238
L ++ EM+ D KPDG + ++L+AC + G G+
Sbjct: 219 PQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGR 278
Query: 239 AIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHG 298
IHE+I+ N L++ + +AL++MY CG ++ +++ K L +M+ G A +G
Sbjct: 279 WIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNG 338
Query: 299 MVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAIS 358
+ A+ LF+E++ + PD ++ + ++
Sbjct: 339 F-------------------------------EERAMDLFSELERSGLEPDSVSFIGVLT 367
Query: 359 ACANVGALAQA-RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNV 416
ACA+ G + +A + +K S+ ++++ G L A+ + +NMP ++
Sbjct: 368 ACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDT 427
Query: 417 ISWSSMINAFAMHGYANSAMNLFHRMKEEDI-EPNGVIFIGVLYACSHAGLVEEG 470
+ WSS+++A G A +K+ D E G + + YA GL EE
Sbjct: 428 VIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYA--SYGLFEEA 480
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 308 bits (789), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 181/599 (30%), Positives = 292/599 (48%), Gaps = 76/599 (12%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXX--XXXXXXXXKAVSKA 130
+F ++P N ++R+ R + + ++ ++ G KA +
Sbjct: 71 LFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGEL 130
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMI 190
++ LGL +HG + F D ++Q L+AMY ++ AR VFD M +RD ++WN MI
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
GY ++G + L +++ M D + ++L CGH +L G+ +H+ + + L
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG 250
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDA------- 303
+++ALVNMY+ CG MD AR ++D++ + ++ T M++GY + G V++A
Sbjct: 251 DKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLM 310
Query: 304 --------------------------------RFIFDQIVEKDLVCWSAMISGYAESDQ- 330
+ Q V D++ +++IS YA+ +
Sbjct: 311 QFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRV 370
Query: 331 ----------------PQEA--------------LKLFNEMQLRNIVPDQITMLSAISAC 360
P A L LF M+ ++ P+ T+ S + A
Sbjct: 371 DLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAY 430
Query: 361 ANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVF----ENMPRKNV 416
A + L QA IH Y K GF SL L+ +Y+KCG L A ++F E K+V
Sbjct: 431 AALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV 490
Query: 417 ISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSS 476
+ W ++I+ + MHG ++A+ +F M + PN + F L ACSH+GLVEEG LF
Sbjct: 491 VLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRF 550
Query: 477 MINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
M+ + R HY C+VDL RA L +A LI ++PF P +WG+L++AC H V+
Sbjct: 551 MLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQ 610
Query: 537 LGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEI 595
LGE AA ++ ELEP++ G V+L+NIYA RW D+ +R M N G+ K+ S +EI
Sbjct: 611 LGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 203/441 (46%), Gaps = 64/441 (14%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
+++SK AL+ + G S I + L Y+ C I AR +F++M +
Sbjct: 29 QSISKTKALHCHVITGGRVS-------GHILSTLSVTYALCGHITYARKLFEEMPQSSLL 81
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTK--PDGVILCTVLSACGHSGNLSYGKAIHE 242
++NI+I Y + G Y + ++ M + K PDG V A G ++ G +H
Sbjct: 82 SYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHG 141
Query: 243 FIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKD 302
I+ + ++Q+AL+ MY+N G +++AR+++D + ++ ++ M+SGY ++G + D
Sbjct: 142 RILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMND 201
Query: 303 ARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACAN 362
A +FD +V E++ L D T++S + C +
Sbjct: 202 ALMMFDWMV--------------------NESVDL-----------DHATIVSMLPVCGH 230
Query: 363 VGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSM 422
+ L R +H ++ G + V NAL++MY KCG + A+ VF+ M R++VI+W+ M
Sbjct: 231 LKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCM 290
Query: 423 INAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHG 482
IN + G +A+ L M+ E + PN V ++ C A V +G+ L HG
Sbjct: 291 INGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL-------HG 343
Query: 483 IAPRHEHYG------CMVDLYC---RANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
A R + Y ++ +Y R +L + P W ++++ C V
Sbjct: 344 WAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP----WSAIIAGC-VQN 398
Query: 534 EV---ELGEFAAKQILELEPD 551
E+ LG F + ++EP+
Sbjct: 399 ELVSDALGLFKRMRREDVEPN 419
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/553 (29%), Positives = 288/553 (52%), Gaps = 34/553 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXX-XXXXXXXXXKAVSKAS 131
+F ++ PD + ++ ++ +P + ++++ A +K S
Sbjct: 118 MFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLS 177
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
LG +HG + GF +D + L+ Y+ R +A +F ++ +D ++W+ +I
Sbjct: 178 NSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIA 237
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
Y Q+G + L ++ +M T+P+ + VL AC + +L G+ HE + GL
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ +ALV+MY+ C + + +A +F +I
Sbjct: 298 EVKVSTALVDMYMKCFSPE-------------------------------EAYAVFSRIP 326
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN-IVPDQITMLSAISACANVGALAQAR 370
KD+V W A+ISG+ + +++ F+ M L N PD I M+ + +C+ +G L QA+
Sbjct: 327 RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAK 386
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
H+Y K GF + + +L+++Y++CG+L A +VF + K+ + W+S+I + +HG
Sbjct: 387 CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHG 446
Query: 431 YANSAMNLF-HRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
A+ F H +K +++PN V F+ +L ACSHAGL+ EG ++F M+N++ +AP EH
Sbjct: 447 KGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEH 506
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
Y +VDL R L A+E+ + MPF+P I G+L+ AC++H E+ E AK++ ELE
Sbjct: 507 YAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELE 566
Query: 550 PDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYH 609
+H G +++SN+Y + W +V +R S+ +GI K A S +EI +VH F+ D H
Sbjct: 567 SNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELH 626
Query: 610 KQSREIYKKLEEV 622
+ +Y L+E+
Sbjct: 627 PEKEPVYGLLKEL 639
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 225/465 (48%), Gaps = 36/465 (7%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++ + N LL+ LSR + L+ + + R KA +
Sbjct: 16 MFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELRE 75
Query: 133 LYLGLEIHGLASK-LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
+ G IHG K + SD ++ + LI MY C R+++A +FD++ D VTW+ M+
Sbjct: 76 VNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVS 135
Query: 192 GYCQSGNYDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
G+ ++G+ Q ++ + M SD PD V L T++SAC N G+ +H F++ G +
Sbjct: 136 GFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFS 195
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+LVN +NC YAK K+A +F I
Sbjct: 196 NDL----SLVNSLLNC---------------------------YAKSRAFKEAVNLFKMI 224
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR 370
EKD++ WS +I+ Y ++ EAL +FN+M P+ T+L + ACA L Q R
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGR 284
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
H A + G + V+ AL+DMY KC + A VF +PRK+V+SW ++I+ F ++G
Sbjct: 285 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344
Query: 431 YANSAMNLFHRM-KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
A+ ++ F M E + P+ ++ + VL +CS G +E+ K F S + ++G
Sbjct: 345 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFI 403
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE 534
+V+LY R L A ++ + + ++W SL++ +HG+
Sbjct: 404 GASLVELYSRCGSLGNASKVFNGIAL-KDTVVWTSLITGYGIHGK 447
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 189/374 (50%), Gaps = 38/374 (10%)
Query: 165 CRRI---MDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVIL 221
CR+ +DAR +F +M+ R WN ++ + +++VL + M + KPD L
Sbjct: 4 CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTL 63
Query: 222 CTVLSACGHSGNLSYGKAIHEFIM-DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLS 280
L ACG ++YG+ IH F+ D L ++ S+L+ MY+ CG M
Sbjct: 64 PVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRM----------- 112
Query: 281 SKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNE 340
+A +FD++ + D+V WS+M+SG+ ++ P +A++ F
Sbjct: 113 --------------------IEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRR 152
Query: 341 MQL-RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCG 399
M + ++ PD++T+++ +SAC + R +H + + GF LS+ N+L++ YAK
Sbjct: 153 MVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSR 212
Query: 400 NLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLY 459
A +F+ + K+VISWS++I + +G A A+ +F+ M ++ EPN + VL
Sbjct: 213 AFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQ 272
Query: 460 ACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNV 519
AC+ A +E+G+K I + G+ + +VD+Y + +A + +P +V
Sbjct: 273 ACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDV 330
Query: 520 IIWGSLMSACQVHG 533
+ W +L+S ++G
Sbjct: 331 VSWVALISGFTLNG 344
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/464 (35%), Positives = 258/464 (55%), Gaps = 37/464 (7%)
Query: 171 ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGH 230
A +FD++ D N ++ G QS ++ + LY EM+ PD VL AC
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK 124
Query: 231 SGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAM 290
S G A H ++ +G L+ ++++AL+ + NCG + +A EL+D + H V ++M
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSM 184
Query: 291 LSGYAKHGMVKDA-------------------------------RFIFDQIVEKDLVCWS 319
SGYAK G + +A R +FD+ EKD+V W+
Sbjct: 185 TSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWN 244
Query: 320 AMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYA-DK 378
AMISGY P+EAL +F EM+ PD +T+LS +SACA +G L + +H Y +
Sbjct: 245 AMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILET 304
Query: 379 NGFGRSLSVN----NALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
S+ V NALIDMYAKCG++ RA EVF + +++ +W+++I A+H +A
Sbjct: 305 ASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEG 363
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV 494
++ +F M+ + PN V FIGV+ ACSH+G V+EG+K FS M + + I P +HYGCMV
Sbjct: 364 SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMV 423
Query: 495 DLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDG 554
D+ RA L +A +ESM PN I+W +L+ AC+++G VELG++A +++L + D G
Sbjct: 424 DMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESG 483
Query: 555 ALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNE 598
V+LSNIYA +W+ V +R+ + + K S +E +++
Sbjct: 484 DYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDD 527
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/479 (22%), Positives = 189/479 (39%), Gaps = 107/479 (22%)
Query: 33 LKQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLRLL 92
LKQIHA ++ + + +F +IP PD CN +LR
Sbjct: 28 LKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGS 87
Query: 93 SRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDP 152
++S P+ T+ LY ++ + G KA SK G HG + GF +
Sbjct: 88 AQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNE 147
Query: 153 FIQTGLIAMYSAC-------------------------------RRIMDARLVFDKMSHR 181
+++ LI ++ C +I +A +FD+M ++
Sbjct: 148 YVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK 207
Query: 182 -------------------------------DAVTWNIMIDGYCQSGNYDQVLKLYEEMK 210
D VTWN MI GY G + L +++EM+
Sbjct: 208 DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMR 267
Query: 211 TSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNG-----LALSAHLQSALVNMYVN 265
+ PD V + ++LSAC G+L GK +H +I++ + + + +AL++MY
Sbjct: 268 DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAK 327
Query: 266 CGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGY 325
CG++D A E +F + ++DL W+ +I G
Sbjct: 328 CGSIDRAIE-------------------------------VFRGVKDRDLSTWNTLIVGL 356
Query: 326 AESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR-WIHTYADKNGFGRS 384
A + ++++F EMQ + P+++T + I AC++ G + + R + D +
Sbjct: 357 A-LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPN 415
Query: 385 LSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMHG------YANSAM 436
+ ++DM + G L A E+M N I W +++ A ++G YAN +
Sbjct: 416 IKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKL 474
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 196/634 (30%), Positives = 326/634 (51%), Gaps = 38/634 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKL--RRVGXXXXXXXXXXXXKAVSKA 130
VF+Q+P+P +++ +RS + L L+ ++ R V ++ A
Sbjct: 57 VFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTA 116
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRR---IMDARLVFDKMSHRDAVTWN 187
L+ + + S AM + C R + A +F +M +D WN
Sbjct: 117 VKLFDEMPERSVVS-------------WTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWN 163
Query: 188 IMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEF--IM 245
M+ GY Q G D LKL+++M P ++ CG N G+A+ F ++
Sbjct: 164 SMVHGYLQFGKVDDALKLFKQM------PGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLV----VSTAMLSGYAKHGMVK 301
+ ++ + ++ N A + +++ + + VS ++++ YA +
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
Query: 302 DARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACA 361
D+R +FD+ V + + W+A++SGY+ + + ++AL +F+ M +I+P+Q T S +++C+
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS 337
Query: 362 NVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSS 421
+G L + +H A K G V N+L+ MY+ GN+ A VF + +K+++SW+S
Sbjct: 338 ALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNS 397
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLF---SSMI 478
+I A HG A +F +M + EP+ + F G+L ACSH G +E+G+KLF SS I
Sbjct: 398 IIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGI 457
Query: 479 NEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELG 538
N I + +HY CMVD+ R L++A ELIE M PN ++W +L+SAC++H +V+ G
Sbjct: 458 NH--IDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRG 515
Query: 539 EFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNE 598
E AA I L+ A V+LSNIYA RW++V +R M GI K+ SS V I +
Sbjct: 516 EKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGK 575
Query: 599 VHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKL 658
H F D+ H IY+KLE + +LK + Y P +HSE+L
Sbjct: 576 KHEFFSGDQPH--CSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERL 633
Query: 659 ALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
A+ +GLI+ + S + ++KNLR+CEDCH+ +KL
Sbjct: 634 AIAFGLINT-VEGSAVTVMKNLRVCEDCHTVIKL 666
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 269 MDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAES 328
+D ARE+++++ S H+ + T M++GY + + DA +FD++ +D+V W++MISG E
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 329 DQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA-RWIHTYADKNGFGRSLSV 387
A+KLF+EM R++V + + ++ C G + QA R + K+ +
Sbjct: 111 GDMNTAVKLFDEMPERSVV----SWTAMVNGCFRSGKVDQAERLFYQMPVKD-----TAA 161
Query: 388 NNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDI 447
N+++ Y + G + A ++F+ MP KNVISW++MI + + A++LF M I
Sbjct: 162 WNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCI 221
Query: 448 EPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPR----HEHY--GCMVDLYCRAN 501
+ F V+ AC++A G I HG+ + +E Y ++ Y
Sbjct: 222 KSTSRPFTCVITACANAPAFHMG-------IQVHGLIIKLGFLYEEYVSASLITFYANCK 274
Query: 502 LLRKAMELIESMPFAPNVIIWGSLMSA 528
+ + ++ + V +W +L+S
Sbjct: 275 RIGDSRKVFDE-KVHEQVAVWTALLSG 300
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 270/462 (58%), Gaps = 8/462 (1%)
Query: 171 ARLVFDKMSHRDAVTWNIMIDGYCQSG--NYDQVLKLYEEM-KTSDTKPDGVILCTVLSA 227
AR +FD+ S + + ++ Y S + + M S +P+ I VL +
Sbjct: 76 ARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKS 135
Query: 228 CGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVN-CGAMDLARELYDKLSSKHLVV 286
+ + +H + +G L +Q+AL++ Y + + LAR+L+D++S +++V
Sbjct: 136 TPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVS 195
Query: 287 STAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEM-QLRN 345
TAMLSGYA+ G + +A +F+ + E+D+ W+A+++ ++ EA+ LF M +
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS 255
Query: 346 IVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAK 405
I P+++T++ +SACA G L A+ IH +A + + V+N+L+D+Y KCGNL A
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 406 EVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE---EDIEPNGVIFIGVLYACS 462
VF+ +K++ +W+SMIN FA+HG + A+ +F M + DI+P+ + FIG+L AC+
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT 375
Query: 463 HAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIW 522
H GLV +G+ F M N GI PR EHYGC++DL RA +A+E++ +M + IW
Sbjct: 376 HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIW 435
Query: 523 GSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANK 582
GSL++AC++HG ++L E A K ++ L P++ G + +++N+Y + W + R+ + ++
Sbjct: 436 GSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQ 495
Query: 583 GISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVS 624
K SR+EI+NEVH F D+ H ++ EIY L+ ++S
Sbjct: 496 NAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 170/401 (42%), Gaps = 66/401 (16%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRS-PTPQNTLFLYQKL--RRVGXXXXXXXXXXXXKAVSK 129
+F + P+TH +L S S P ++ F + +L R K+
Sbjct: 79 IFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPY 138
Query: 130 ASALYLGLEIHGLASKLGFHSDPFIQTGLIAMY-SACRRIMDARLVFDKMSHRDAVTWNI 188
S+ + +H K GFH +QT L+ Y S+ I AR +FD+MS R+ V+W
Sbjct: 139 LSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTA 198
Query: 189 MIDGYCQSGNYDQVLKLYEEMKTSDT--------------------------------KP 216
M+ GY +SG+ + L+E+M D +P
Sbjct: 199 MLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRP 258
Query: 217 DGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELY 276
+ V + VLSAC +G L K IH F L+ + ++LV++Y CG ++ A ++
Sbjct: 259 NEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF 318
Query: 277 DKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALK 336
S K L +M++ +A HG ++A +F++++
Sbjct: 319 KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMM------------------------- 353
Query: 337 LFNEMQLRNIVPDQITMLSAISACANVGALAQAR-WIHTYADKNGFGRSLSVNNALIDMY 395
++ + +I PD IT + ++AC + G +++ R + ++ G + LID+
Sbjct: 354 ---KLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLL 410
Query: 396 AKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMHGYANSA 435
+ G A EV M K + W S++NA +HG+ + A
Sbjct: 411 GRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLA 451
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 12/206 (5%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVT 185
A ++ L L IH A + SD F+ L+ +Y C + +A VF S +
Sbjct: 269 ACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTA 328
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEM---KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE 242
WN MI+ + G ++ + ++EEM +D KPD + +L+AC H G +S G+ +
Sbjct: 329 WNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFD 388
Query: 243 FIMDNGLALSAHLQ--SALVNMYVNCGAMDLARELYDKLSSK-HLVVSTAMLSGYAKHGM 299
+M N + ++ L+++ G D A E+ + K + ++L+ HG
Sbjct: 389 -LMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGH 447
Query: 300 VKDARFIFDQIVEKDLVCWSAMISGY 325
+ A ++ K+LV + GY
Sbjct: 448 LDLA-----EVAVKNLVALNPNNGGY 468
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 266/496 (53%), Gaps = 33/496 (6%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGN 198
IH LA G+ + + LI Y C + R VFD MSHR+ +T +I G ++
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENEL 236
Query: 199 YDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSA 258
++ L+L+ M+ P+ V + L+AC S + G+ IH + G+ ++SA
Sbjct: 237 HEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 296
Query: 259 LVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCW 318
L++MY C G ++DA IF+ E D V
Sbjct: 297 LMDMYSKC-------------------------------GSIEDAWTIFESTTEVDEVSM 325
Query: 319 SAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV-GALAQARWIHTYAD 377
+ ++ G A++ +EA++ F M L+ V ++SA+ + + +L + +H+
Sbjct: 326 TVILVGLAQNGSEEEAIQFFIRM-LQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVI 384
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
K F + VNN LI+MY+KCG+L ++ VF MP++N +SW+SMI AFA HG+ +A+
Sbjct: 385 KRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALK 444
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLY 497
L+ M +++P V F+ +L+ACSH GL+++G++L + M HGI PR EHY C++D+
Sbjct: 445 LYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDML 504
Query: 498 CRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALV 557
RA LL++A I+S+P P+ IW +L+ AC HG+ E+GE+AA+Q+ + PD A +
Sbjct: 505 GRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHI 564
Query: 558 VLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYK 617
+++NIY+ +W + + M G++KE S +EI ++ H F++ D+ H Q+ IY
Sbjct: 565 LIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYD 624
Query: 618 KLEEVVSELKLVSYTP 633
L + + Y P
Sbjct: 625 VLSGLFPVMVDEGYRP 640
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 184/402 (45%), Gaps = 42/402 (10%)
Query: 154 IQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD 213
+ L+++Y+ C +++DA +FD+M RD ++ NI+ G+ ++ + L + M S
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 214 TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAR 273
D L VLS C K IH + +G + + L+ Y CG R
Sbjct: 152 GF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 274 ELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQE 333
++D +S ++++ T A+ISG E++ ++
Sbjct: 211 GVFDGMSHRNVITLT-------------------------------AVISGLIENELHED 239
Query: 334 ALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALID 393
L+LF+ M+ + P+ +T LSA++AC+ + + + IH K G L + +AL+D
Sbjct: 240 GLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMD 299
Query: 394 MYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVI 453
MY+KCG++ A +FE+ + +S + ++ A +G A+ F RM + +E + +
Sbjct: 300 MYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANV 359
Query: 454 ---FIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELI 510
+GV + + GL G++L S +I + G ++++Y + L + +
Sbjct: 360 VSAVLGVSFIDNSLGL---GKQLHSLVIKRKFSGNTFVNNG-LINMYSKCGDLTDSQTVF 415
Query: 511 ESMPFAPNVIIWGSLMSACQVHGE--VELGEFAAKQILELEP 550
MP N + W S+++A HG L + LE++P
Sbjct: 416 RRMP-KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKP 456
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 152/334 (45%), Gaps = 33/334 (9%)
Query: 99 QNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGL 158
++ L L+ +RR A S + + G +IH L K G S+ I++ L
Sbjct: 238 EDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESAL 297
Query: 159 IAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDG 218
+ MYS C I DA +F+ + D V+ +++ G Q+G+ ++ ++ + M + + D
Sbjct: 298 MDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDA 357
Query: 219 VILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDK 278
++ VL +L GK +H ++ + + + + L+NMY CG + ++ ++ +
Sbjct: 358 NVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRR 417
Query: 279 LSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLF 338
+ ++ V +M++ +A+HG G A ALKL+
Sbjct: 418 MPKRNYVSWNSMIAAFARHG------------------------HGLA-------ALKLY 446
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQAR-WIHTYADKNGFGRSLSVNNALIDMYAK 397
EM + P +T LS + AC++VG + + R ++ + +G +IDM +
Sbjct: 447 EEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGR 506
Query: 398 CGNLIRAKEVFENMPRK-NVISWSSMINAFAMHG 430
G L AK +++P K + W +++ A + HG
Sbjct: 507 AGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 13/317 (4%)
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL 343
LVV ++LS YAK G + DA +FD++ +D++ + + G+ + + + L M L
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM-L 148
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR 403
+ D T+ +S C + IH A +G+ + +SV N LI Y KCG +
Sbjct: 149 GSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 404 AKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
+ VF+ M +NVI+ +++I+ + + LF M+ + PN V ++ L ACS
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSG 268
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWG 523
+ + EGQ++ +++ ++GI ++D+Y + + A + ES V +
Sbjct: 269 SQRIVEGQQI-HALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTV 327
Query: 524 SLMSACQVHGEVELGEFAAKQI---LELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMA 580
L+ Q E E +F + + +E++ + A++ +S I N +GL +Q
Sbjct: 328 ILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFID------NSLGLGKQ--L 379
Query: 581 NKGISKEKASSRVEINN 597
+ + K K S +NN
Sbjct: 380 HSLVIKRKFSGNTFVNN 396
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 182/575 (31%), Positives = 291/575 (50%), Gaps = 54/575 (9%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRR---IMDARLVFDKMSHRDAVTWNIMIDG 192
G ++HGLA KLG H ++ +I+MY C +A VF+ + ++ VTWN MI
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 193 Y--CQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKA------IHEFI 244
+ C G + + ++ M + D L + S+ S +L + +H
Sbjct: 236 FQCCNLGK--KAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLT 293
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDAR 304
+ +GL + +AL+ +Y + ML Y D
Sbjct: 294 VKSGLVTQTEVATALIKVY------------------------SEMLEDYT------DCY 323
Query: 305 FIFDQIVE-KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV 363
+F ++ +D+V W+ +I+ +A D P+ A+ LF +++ + PD T S + ACA +
Sbjct: 324 KLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGL 382
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMI 423
A IH K GF +NN+LI YAKCG+L VF++M ++V+SW+SM+
Sbjct: 383 VTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSML 442
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
A+++HG +S + +F +M DI P+ FI +L ACSHAG VEEG ++F SM +
Sbjct: 443 KAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPET 499
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAK 543
P+ HY C++D+ RA +A E+I+ MP P+ ++W +L+ +C+ HG LG+ AA
Sbjct: 500 LPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAAD 559
Query: 544 QILEL-EPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVF 602
++ EL EP + + + +SNIY E +N+ L + M + KE S EI N+VH F
Sbjct: 560 KLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEF 619
Query: 603 MMADRYHKQSREIYKKLEEVVSELKLVSYTPST-SGXXXXXXXXXXXXXXXWHSEKLALC 661
R+ +Y++L+ ++S LK + Y P S HSEKLAL
Sbjct: 620 ASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALA 679
Query: 662 YGLISKRRKESC----IRIVKNLRICEDCHSFMKL 692
+ ++ R+ C I+I+KN RIC DCH+FMKL
Sbjct: 680 FAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKL 714
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/503 (23%), Positives = 222/503 (44%), Gaps = 59/503 (11%)
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
+ L H L+ + + + LI MY+ C I+ AR VFD M R+ V+W +I GY
Sbjct: 79 INLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYV 138
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
Q+GN + L+ M S P+ L +VL++C + GK +H + GL S +
Sbjct: 139 QAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSIY 193
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
+ +A+++MY C A E + +F+ I K+
Sbjct: 194 VANAVISMYGRCHDGAAAYEAWT----------------------------VFEAIKFKN 225
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR---- 370
LV W++MI+ + + ++A+ +F M + D+ T+L+ S+ L
Sbjct: 226 LVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKC 285
Query: 371 --WIHTYADKNGFGRSLSVNNALIDMYAK-CGNLIRAKEVFENMPR-KNVISWSSMINAF 426
+H+ K+G V ALI +Y++ + ++F M +++++W+ +I AF
Sbjct: 286 CLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAF 345
Query: 427 AMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKL-FSSMINEHGIAP 485
A++ A++LF ++++E + P+ F VL AC AGLV L + + + G
Sbjct: 346 AVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLVTARHALSIHAQVIKGGFLA 402
Query: 486 RHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQI 545
++ Y + L M + + M + +V+ W S++ A +HG+V+ Q
Sbjct: 403 DTVLNNSLIHAYAKCGSLDLCMRVFDDMD-SRDVVSWNSMLKAYSLHGQVD-SILPVFQK 460
Query: 546 LELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMA 605
+++ PD + +LS R + + R EK + ++N+ V M
Sbjct: 461 MDINPDSATFIALLSACSHAGRVEEGLRIFRSMF-------EKPETLPQLNHYACVIDML 513
Query: 606 DRYHKQSREIYKKLEEVVSELKL 628
R E + + EEV+ ++ +
Sbjct: 514 SR-----AERFAEAEEVIKQMPM 531
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 283/527 (53%), Gaps = 36/527 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRV-GXXXXXXXXXXXXKAVSKAS 131
VF ++P D N ++ S + + L+ +RR+ G A+ +A
Sbjct: 160 VFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
AL G +HG +++GF +D ++TG++ +Y+ + I+ AR VFD ++ VTW+ MI
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKP--DGVILCTVLSACGHSGNLSYGKAIHEFIMDNGL 249
GY ++ + +++ +M +D V + +L C G+LS G+ +H + + G
Sbjct: 280 GYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGF 339
Query: 250 ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQ 309
L L V ++S YAK+G + DA F +
Sbjct: 340 ILD-------------------------------LTVQNTIISFYAKYGSLCDAFRQFSE 368
Query: 310 IVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
I KD++ ++++I+G + +P+E+ +LF+EM+ I PD T+L ++AC+++ AL
Sbjct: 369 IGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHG 428
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
H Y +G+ + S+ NAL+DMY KCG L AK VF+ M +++++SW++M+ F +H
Sbjct: 429 SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIH 488
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI-NEHGIAPRHE 488
G A++LF+ M+E + P+ V + +L ACSH+GLV+EG++LF+SM + + PR +
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRID 548
Query: 489 HYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILEL 548
HY CM DL RA L +A + + MPF P++ + G+L+SAC + ELG +K++ L
Sbjct: 549 HYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL 608
Query: 549 EPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEI 595
+ +LV+LSN Y+ RW D IR +G+ K S V++
Sbjct: 609 GETTE-SLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 225/499 (45%), Gaps = 48/499 (9%)
Query: 73 VFSQIPNPDTH--FCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKA 130
VF +IP+P + + ++R + + + L LY K+ G KA +
Sbjct: 57 VFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGL 116
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMI 190
A+ G IH + F +D ++ T L+ Y+ C + A VFD+M RD V WN MI
Sbjct: 117 RAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMI 176
Query: 191 DGYCQSGNYDQVLKLYEEMKTSD-TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGL 249
G+ V+ L+ +M+ D P+ + + A G +G L GKA+H + G
Sbjct: 177 SGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF 236
Query: 250 ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQ 309
S LVV T +L YAK + AR +FD
Sbjct: 237 -------------------------------SNDLVVKTGILDVYAKSKCIIYARRVFDL 265
Query: 310 IVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAIS------ACANV 363
+K+ V WSAMI GY E++ +EA ++F +M +V D + M++ ++ CA
Sbjct: 266 DFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM----LVNDNVAMVTPVAIGLILMGCARF 321
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMI 423
G L+ R +H YA K GF L+V N +I YAK G+L A F + K+VIS++S+I
Sbjct: 322 GDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLI 381
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
++ + LFH M+ I P+ +GVL ACSH + G + HG
Sbjct: 382 TGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCV-VHGY 440
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVH--GEVELGEFA 541
A ++D+Y + L A + ++M +++ W +++ +H G+ L F
Sbjct: 441 AVNTSICNALMDMYTKCGKLDVAKRVFDTM-HKRDIVSWNTMLFGFGIHGLGKEALSLFN 499
Query: 542 AKQILELEPDHDGALVVLS 560
+ Q + PD L +LS
Sbjct: 500 SMQETGVNPDEVTLLAILS 518
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 149/318 (46%), Gaps = 53/318 (16%)
Query: 223 TVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNM---YVNCGAMDLARELYDKL 279
++L C S NL G+ IH+ ++ L LS+ + LVN+ Y +C ++LAR
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSS--STVLVNLTRLYASCNEVELARH----- 56
Query: 280 SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL--VCWSAMISGYAESDQPQEALKL 337
+FD+I + + W MI YA +D ++AL L
Sbjct: 57 --------------------------VFDEIPHPRINPIAWDLMIRAYASNDFAEKALDL 90
Query: 338 FNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAK 397
+ +M + P + T + ACA + A+ + IH++ + + F + V AL+D YAK
Sbjct: 91 YYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAK 150
Query: 398 CGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEED-IEPNGVIFIG 456
CG L A +VF+ MP++++++W++MI+ F++H + LF M+ D + PN +G
Sbjct: 151 CGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVG 210
Query: 457 VLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV------DLYCRANLLRKAMELI 510
+ A AG + EG+ + HG R +V D+Y ++ + A +
Sbjct: 211 MFPALGRAGALREGKAV-------HGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF 263
Query: 511 ESMPFAPNVIIWGSLMSA 528
+ + F N + W +++
Sbjct: 264 D-LDFKKNEVTWSAMIGG 280
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 178/510 (34%), Positives = 283/510 (55%), Gaps = 13/510 (2%)
Query: 88 LLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLG 147
L+R LS+ + T+ +Y + G +A K + G IH A K G
Sbjct: 75 LVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNG 134
Query: 148 FHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYE 207
++QTGL+ +YS I A+ FD ++ ++ V+WN ++ GY +SG D+ ++++
Sbjct: 135 LCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFD 194
Query: 208 EMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL-SAHLQSALVNMYVNC 266
++ + D V ++S+ G++ G A F + + L S + L+ YVNC
Sbjct: 195 KI----PEKDAVSWNLIISSYAKKGDM--GNACSLF---SAMPLKSPASWNILIGGYVNC 245
Query: 267 GAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYA 326
M LAR +D + K+ V M+SGY K G V+ A +F + +KD + + AMI+ Y
Sbjct: 246 REMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYT 305
Query: 327 ESDQPQEALKLFNEMQLRN--IVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS 384
++ +P++ALKLF +M RN I PD+IT+ S +SA + +G + W+ +Y ++G
Sbjct: 306 QNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKID 365
Query: 385 LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE 444
++ +LID+Y K G+ +A ++F N+ +K+ +S+S+MI ++G A A +LF M E
Sbjct: 366 DLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIE 425
Query: 445 EDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLR 504
+ I PN V F G+L A SH+GLV+EG K F+SM +H + P +HYG MVD+ RA L
Sbjct: 426 KKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLE 484
Query: 505 KAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYA 564
+A ELI+SMP PN +WG+L+ A +H VE GE A ++LE D G L L+ IY+
Sbjct: 485 EAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYS 544
Query: 565 KERRWNDVGLIRQSMANKGISKEKASSRVE 594
RW+D +R S+ K + K S VE
Sbjct: 545 SVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 177/358 (49%), Gaps = 20/358 (5%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D+ +W ++ Q + + + +Y +M S P + +VL ACG N+ GK IH
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVK 301
+ NGL ++Q+ LV +Y G ++LA++ +D ++ K+ V ++L GY + G +
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 302 DARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACA 361
+AR +FD+I EKD V W+ +IS YA+ A LF+ M L++ P +L I
Sbjct: 188 EARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKS--PASWNIL--IGGYV 243
Query: 362 NVGALAQARWIHTYAD----KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVI 417
N + AR TY D KNG +I Y K G++ A+E+F M +K+ +
Sbjct: 244 NCREMKLAR---TYFDAMPQKNGVSWI-----TMISGYTKLGDVQSAEELFRLMSKKDKL 295
Query: 418 SWSSMINAFAMHGYANSAMNLFHRMKEED--IEPNGVIFIGVLYACSHAGLVEEGQKLFS 475
+ +MI + +G A+ LF +M E + I+P+ + V+ A S G G +
Sbjct: 296 VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV-E 354
Query: 476 SMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
S I EHGI ++DLY + KA ++ ++ + + + +++ C ++G
Sbjct: 355 SYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGING 411
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/508 (32%), Positives = 273/508 (53%), Gaps = 34/508 (6%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N ++ S+S P + L+ ++ + G +S L LG ++HG K
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSL---LSVLDCLNLGKQVHGYTLK 478
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL 205
G D + + L +YS C + ++ +F + +D W MI G+ + G + + L
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 206 YEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVN 265
+ EM T PD L VL+ C +L GK IH + + G+ L SALVNMY
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 266 CGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGY 325
CG++ LAR++YD+L V ++++SGY++HG+++D +F +D+V +SG+
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLF-----RDMV-----MSGF 648
Query: 326 AESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSL 385
+ + I +A+S +++GA +H Y K G
Sbjct: 649 T----------------MDSFAISSILKAAALSDESSLGA-----QVHAYITKIGLCTEP 687
Query: 386 SVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEE 445
SV ++L+ MY+K G++ + F + ++I+W+++I ++A HG AN A+ +++ MKE+
Sbjct: 688 SVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEK 747
Query: 446 DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRK 505
+P+ V F+GVL ACSH GLVEE +SM+ ++GI P + HY CMVD R+ LR+
Sbjct: 748 GFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLRE 807
Query: 506 AMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAK 565
A I +M P+ ++WG+L++AC++HGEVELG+ AAK+ +ELEP GA + LSNI A+
Sbjct: 808 AESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAE 867
Query: 566 ERRWNDVGLIRQSMANKGISKEKASSRV 593
W++V R+ M G+ KE S V
Sbjct: 868 VGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 215/495 (43%), Gaps = 48/495 (9%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F IP PD CN ++ + + +L + K+ +G A S A
Sbjct: 106 LFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQA 165
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+ K+G+ +++ LI ++S R DA VF + WN +I G
Sbjct: 166 PLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAG 225
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
++ NY V L+ EM KPD +VL+AC L +GK + +
Sbjct: 226 ALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARV-------- 277
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ CGA D+ V TA++ YAK G + +A +F +I
Sbjct: 278 -----------IKCGAEDV-------------FVCTAIVDLYAKCGHMAEAMEVFSRIPN 313
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
+V W+ M+SGY +S+ AL++F EM+ + + T+ S ISAC + +A +
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP---RKNVISWSSMINAFAMH 429
H + K+GF SV ALI MY+K G++ +++VFE++ R+N++ + MI +F+
Sbjct: 374 HAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQS 431
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYA--CSHAGLVEEGQKLFSSMINEHGIAPRH 487
A+ LF RM +E + + +L C + G G L S ++ + +
Sbjct: 432 KKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSS- 490
Query: 488 EHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFAAKQI 545
+ LY + L ++ +L + +PF N W S++S +G + +G F+
Sbjct: 491 -----LFTLYSKCGSLEESYKLFQGIPFKDNA-CWASMISGFNEYGYLREAIGLFSEMLD 544
Query: 546 LELEPDHDGALVVLS 560
PD VL+
Sbjct: 545 DGTSPDESTLAAVLT 559
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 155/328 (47%), Gaps = 42/328 (12%)
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMK 210
D F+ L++ YS + DA +FD + D V+ NIMI GY Q +++ L+ + +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 211 TSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMD 270
+ + + +V+SAC + LQ+ L + V C +
Sbjct: 143 FLGFEANEISYGSVISAC------------------------SALQAPLFSELVCCHTIK 178
Query: 271 LARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQ 330
+ Y+ VV +A++ ++K+ +DA +F + ++ CW+ +I+G +
Sbjct: 179 MGYFFYE-------VVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQN 231
Query: 331 PQEALKLFNEMQLRNIVPDQITMLSAISACANV-----GALAQARWIHTYADKNGFGRSL 385
LF+EM + PD T S ++ACA++ G + QAR I A+ +
Sbjct: 232 YGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAED------V 285
Query: 386 SVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEE 445
V A++D+YAKCG++ A EVF +P +V+SW+ M++ + A SA+ +F M+
Sbjct: 286 FVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHS 345
Query: 446 DIEPNGVIFIGVLYACSHAGLVEEGQKL 473
+E N V+ AC +V E ++
Sbjct: 346 GVEINNCTVTSVISACGRPSMVCEASQV 373
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 125/247 (50%), Gaps = 7/247 (2%)
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL 343
+ ++ ++LS Y+ G + DA +FD I + D+V + MISGY + +E+L+ F++M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR 403
++I+ S ISAC+ + A + + + K G+ V +ALID+++K
Sbjct: 144 LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED 203
Query: 404 AKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
A +VF + NV W+++I + + +LFH M +P+ + VL AC+
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGC--MVDLYCRANLLRKAMELIESMPFAPNVII 521
+ G+ + + +I + + C +VDLY + + +AME+ +P P+V+
Sbjct: 264 LEKLRFGKVVQARVIK----CGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVVS 318
Query: 522 WGSLMSA 528
W ++S
Sbjct: 319 WTVMLSG 325
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
V+ ++P D C+ L+ S+ Q+ L++ + G KA + +
Sbjct: 608 VYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDE 667
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
LG ++H +K+G ++P + + L+ MYS I D F +++ D + W +I
Sbjct: 668 SSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIAS 727
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSG 232
Y Q G ++ L++Y MK KPD V VLSAC H G
Sbjct: 728 YAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGG 767
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 267/514 (51%), Gaps = 42/514 (8%)
Query: 187 NIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCT-VLSACGHSGNLSYGKAIHEFIM 245
N MI + S + +L+ ++ + + P + + L C SG+L G IH I
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
+G + L + L+++Y C DA
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENS-------------------------------TDACK 169
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIV-----PDQITMLSAISAC 360
+FD+I ++D V W+ + S Y + + ++ L LF++M +N V PD +T L A+ AC
Sbjct: 170 VFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKM--KNDVDGCVKPDGVTCLLALQAC 227
Query: 361 ANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWS 420
AN+GAL + +H + D+NG +L+++N L+ MY++CG++ +A +VF M +NV+SW+
Sbjct: 228 ANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWT 287
Query: 421 SMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMIN- 479
++I+ AM+G+ A+ F+ M + I P G+L ACSH+GLV EG F M +
Sbjct: 288 ALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSG 347
Query: 480 EHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGE 539
E I P HYGC+VDL RA LL KA LI+SM P+ IW +L+ AC+VHG+VELGE
Sbjct: 348 EFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGE 407
Query: 540 FAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEV 599
++EL+ + G V+L N Y+ +W V +R M K I + S +E+ V
Sbjct: 408 RVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTV 467
Query: 600 HVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPS-TSGXXXXXXXXXXXXXXXWHSEKL 658
H F++ D H + EIYK L E+ +LK+ Y TS +HSEKL
Sbjct: 468 HEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKL 527
Query: 659 ALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
A+ +G++ + IR+ KNLR C DCH+F K
Sbjct: 528 AIAFGILVT-PPGTTIRVTKNLRTCVDCHNFAKF 560
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 192/407 (47%), Gaps = 39/407 (9%)
Query: 32 QLKQIHAQILRSN-PSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLR 90
L+QIHA +LR++ N VFSQ NP CN ++R
Sbjct: 26 HLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIR 85
Query: 91 LLSRSPTPQNTLFLYQKLRR-VGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFH 149
S S TP L++ LRR K K+ L GL+IHG GF
Sbjct: 86 AFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFL 145
Query: 150 SDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEM 209
SD + T L+ +YS C DA VFD++ RD V+WN++ Y ++ VL L+++M
Sbjct: 146 SDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKM 205
Query: 210 KTSD---TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNC 266
K KPDGV L AC + G L +GK +H+FI +NGL+ + +L + LV+MY C
Sbjct: 206 KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRC 265
Query: 267 GAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYA 326
G+MD A +++ +GM E+++V W+A+ISG A
Sbjct: 266 GSMDKAYQVF--------------------YGMR-----------ERNVVSWTALISGLA 294
Query: 327 ESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLS 386
+ +EA++ FNEM I P++ T+ +SAC++ G +A+ F +
Sbjct: 295 MNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPN 354
Query: 387 VNN--ALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMHG 430
+++ ++D+ + L +A + ++M K + W +++ A +HG
Sbjct: 355 LHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHG 401
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 116/232 (50%), Gaps = 6/232 (2%)
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVP-DQITMLSAISACANVG 364
+F Q + L + MI ++ S P E +LF ++ + +P + ++ A+ C G
Sbjct: 68 VFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSG 127
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
L IH +GF + L+D+Y+ C N A +VF+ +P+++ +SW+ + +
Sbjct: 128 DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFS 187
Query: 425 AFAMHGYANSAMNLFHRMKEED---IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
+ + + LF +MK + ++P+GV + L AC++ G ++ G+++ I+E+
Sbjct: 188 CYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV-HDFIDEN 246
Query: 482 GIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
G++ +V +Y R + KA ++ M NV+ W +L+S ++G
Sbjct: 247 GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNG 297
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 175/542 (32%), Positives = 275/542 (50%), Gaps = 35/542 (6%)
Query: 153 FIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTS 212
FI L+ Y + A +FD+M RD V+WN +I GY G + ++ M S
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 213 DT--KPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMD 270
+ +P+ V +++SAC + G+ G+ IH +M G+ + +A +N Y G +
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 271 LARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQ 330
+ +L++ LS K+LV W+ MI + ++
Sbjct: 187 SSCKLFEDLSI-------------------------------KNLVSWNTMIVIHLQNGL 215
Query: 331 PQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNA 390
++ L FN + PDQ T L+ + +C ++G + A+ IH GF + + A
Sbjct: 216 AEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTA 275
Query: 391 LIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPN 450
L+D+Y+K G L + VF + + ++W++M+ A+A HG+ A+ F M I P+
Sbjct: 276 LLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPD 335
Query: 451 GVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELI 510
V F +L ACSH+GLVEEG+ F +M + I PR +HY CMVDL R+ LL+ A LI
Sbjct: 336 HVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLI 395
Query: 511 ESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWN 570
+ MP P+ +WG+L+ AC+V+ + +LG AA+++ ELEP V+LSNIY+ W
Sbjct: 396 KEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWK 455
Query: 571 DVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKL-V 629
D IR M KG+ + S +E N++H F++ D H +S +I KKL+E+ ++K +
Sbjct: 456 DASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEM 515
Query: 630 SYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSF 689
Y T HSEK+A+ +GL+ E I I KNLRIC DCH
Sbjct: 516 GYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPII-IRKNLRICGDCHET 574
Query: 690 MK 691
K
Sbjct: 575 AK 576
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 126/292 (43%), Gaps = 33/292 (11%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G IHGL K G + + I Y + + +F+ +S ++ V+WN MI + Q
Sbjct: 153 GRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQ 212
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
+G ++ L + + +PD VL +C G + + IH IM G + + +
Sbjct: 213 NGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCI 272
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
+AL+++Y G ++ + ++ +++S + TAML+ YA HG +D
Sbjct: 273 TTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRD------------- 319
Query: 316 VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR-WIHT 374
A+K F M I PD +T ++AC++ G + + + + T
Sbjct: 320 ------------------AIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFET 361
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMINA 425
+ + L + ++D+ + G L A + + MP + W +++ A
Sbjct: 362 MSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N ++ + ++ + L + RRVG ++ + L IHGL
Sbjct: 204 NTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMF 263
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL 205
GF + I T L+ +YS R+ D+ VF +++ D++ W M+ Y G +K
Sbjct: 264 GGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKH 323
Query: 206 YEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE 242
+E M PD V +L+AC HSG + GK E
Sbjct: 324 FELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFE 360
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 166/564 (29%), Positives = 286/564 (50%), Gaps = 35/564 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++P+ D ++ + S + ++ + G K+
Sbjct: 67 LFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKV 126
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDAR-LVFDKMSHRDAVTWNIMID 191
L G +HG+ KLG ++ ++ MY+ C M+A L+F + ++ VTW +I
Sbjct: 127 LAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLIT 186
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
G+ G+ LK+Y++M + + + + A +++ GK IH ++ G
Sbjct: 187 GFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQS 246
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ + ++++++Y CG + +A+ F ++
Sbjct: 247 NLPVMNSILDLYCRCGYLS-------------------------------EAKHYFHEME 275
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
+KDL+ W+ +IS SD EAL +F + + VP+ T S ++ACAN+ AL +
Sbjct: 276 DKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQ 334
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVF-ENMPRKNVISWSSMINAFAMHG 430
+H + GF +++ + NALIDMYAKCGN+ ++ VF E + R+N++SW+SM+ + HG
Sbjct: 335 LHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY 490
Y A+ LF +M I P+ ++F+ VL AC HAGLVE+G K F+ M +E+GI P + Y
Sbjct: 395 YGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIY 454
Query: 491 GCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVEL-GEFAAKQILELE 549
C+VDL RA + +A EL+E MPF P+ WG+++ AC+ H L AA++++EL+
Sbjct: 455 NCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELK 514
Query: 550 PDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYH 609
P G V+LS IYA E +W D +R+ M G KE S + + N+V F ++D+
Sbjct: 515 PKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMC 574
Query: 610 KQSREIYKKLEEVVSELKLVSYTP 633
+ +Y L ++ E + Y P
Sbjct: 575 PNASSVYSVLGLLIEETREAGYVP 598
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 187/411 (45%), Gaps = 38/411 (9%)
Query: 154 IQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD 213
+ T LI Y + +AR +FD+M RD V W MI GY S + + + EM
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 214 TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAR 273
T P+ L +VL +C + L+YG +H ++ G+ S ++ +A++NMY C
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV----- 161
Query: 274 ELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQE 333
++ A IF I K+ V W+ +I+G+
Sbjct: 162 -------------------------TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIG 196
Query: 334 ALKLFNEMQLRN--IVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNAL 391
LK++ +M L N + P IT+ A+ A A++ ++ + IH K GF +L V N++
Sbjct: 197 GLKMYKQMLLENAEVTPYCITI--AVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSI 254
Query: 392 IDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNG 451
+D+Y +CG L AK F M K++I+W+++I+ ++ A+ +F R + + PN
Sbjct: 255 LDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RSDSSEALLMFQRFESQGFVPNC 313
Query: 452 VIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIE 511
F ++ AC++ + GQ+L I G E ++D+Y + + + +
Sbjct: 314 YTFTSLVAACANIAALNCGQQLHGR-IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFG 372
Query: 512 SMPFAPNVIIWGSLMSACQVHG-EVELGEFAAKQILE-LEPDHDGALVVLS 560
+ N++ W S+M HG E E K + + PD + VLS
Sbjct: 373 EIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLS 423
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 133/247 (53%), Gaps = 3/247 (1%)
Query: 282 KHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEM 341
KH +++T ++ Y + G+V++AR +FD++ ++D+V W+AMI+GYA S+ A + F+EM
Sbjct: 43 KHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEM 102
Query: 342 QLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNL 401
+ P++ T+ S + +C N+ LA +H K G SL V+NA+++MYA C
Sbjct: 103 VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVT 162
Query: 402 IRAK-EVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYA 460
+ A +F ++ KN ++W+++I F G + ++ +M E+ E + A
Sbjct: 163 MEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRA 222
Query: 461 CSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVI 520
+ V G+++ +S+I + G ++DLYCR L +A M ++I
Sbjct: 223 SASIDSVTTGKQIHASVI-KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLI 280
Query: 521 IWGSLMS 527
W +L+S
Sbjct: 281 TWNTLIS 287
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 298 bits (763), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 277/549 (50%), Gaps = 34/549 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++P D N ++ +S + L L+ ++ G A S+
Sbjct: 164 VFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLW 223
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L G EIH K GF D ++ + L+ MY C + AR VF KM + V WN MI G
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKG 283
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y G+ +++ M T+P L ++L AC S NL +GK IH +++ + +
Sbjct: 284 YVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD 343
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
++ +L+++Y CG +LA ++ K +
Sbjct: 344 IYVNCSLIDLYFKCGEANLAETVFSK--------------------------------TQ 371
Query: 313 KDLV-CWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
KD+ W+ MIS Y +A++++++M + PD +T S + AC+ + AL + +
Sbjct: 372 KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQ 431
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
IH ++ + +AL+DMY+KCGN A +F ++P+K+V+SW+ MI+A+ HG
Sbjct: 432 IHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQ 491
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
A+ F M++ ++P+GV + VL AC HAGL++EG K FS M +++GI P EHY
Sbjct: 492 PREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYS 551
Query: 492 CMVDLYCRANLLRKAMELIESMP-FAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEP 550
CM+D+ RA L +A E+I+ P + N + +L SAC +H E LG+ A+ ++E P
Sbjct: 552 CMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYP 611
Query: 551 DHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHK 610
D +VL N+YA W+ +R M G+ K+ S +E++++V F DR H
Sbjct: 612 DDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHL 671
Query: 611 QSREIYKKL 619
++ +Y+ L
Sbjct: 672 RAENVYECL 680
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 224/483 (46%), Gaps = 36/483 (7%)
Query: 81 DTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXX-XXXKAVSKASALYLGLEI 139
D + N L+ S++ +TL ++++L KA +LG I
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129
Query: 140 HGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNY 199
H L K G+ D + + L+ MY+ ++ VFD+M RD +WN +I + QSG
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEA 189
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSAL 259
++ L+L+ M++S +P+ V L +SAC L GK IH + G L ++ SAL
Sbjct: 190 EKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSAL 249
Query: 260 VNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWS 319
V+MY C +++ARE++ K+ K LV +M+ GY G
Sbjct: 250 VDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKG--------------------- 288
Query: 320 AMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKN 379
+ +++ N M + P Q T+ S + AC+ L ++IH Y ++
Sbjct: 289 ----------DSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS 338
Query: 380 GFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLF 439
+ VN +LID+Y KCG A+ VF + SW+ MI+++ G A+ ++
Sbjct: 339 VVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVY 398
Query: 440 HRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCR 499
+M ++P+ V F VL ACS +E+G+++ S I+E + ++D+Y +
Sbjct: 399 DQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS-ISESRLETDELLLSALLDMYSK 457
Query: 500 ANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFAAKQILELEPDHDGALV 557
++A + S+P +V+ W ++SA HG+ L +F Q L+PD L
Sbjct: 458 CGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 558 VLS 560
VLS
Sbjct: 517 VLS 519
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 208/463 (44%), Gaps = 67/463 (14%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR-DAVTWNIMIDGYCQSG 197
+H LG D + LI +Y C+ AR VF+ R D WN ++ GY ++
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 198 NYDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQ 256
+ L++++ + S PD V+ A G G G+ IH ++ +G +
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 257 SALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV 316
S+LV MY AK + +++ +FD++ E+D+
Sbjct: 146 SSLVGMY-------------------------------AKFNLFENSLQVFDEMPERDVA 174
Query: 317 CWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYA 376
W+ +IS + +S + ++AL+LF M+ P+ +++ AISAC+ + L + + IH
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC 234
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAM 436
K GF VN+AL+DMY KC L A+EVF+ MPRK++++W+SMI + G + S +
Sbjct: 235 VKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCV 294
Query: 437 NLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQ----KLFSSMIN------------- 479
+ +RM E P+ +L ACS + + G+ + S++N
Sbjct: 295 EILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLY 354
Query: 480 ----EHGIAPR---------HEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWG 523
E +A E + M+ Y KA+E+ + M P+V+ +
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 524 SLMSACQVHGEVELGEFAAKQILELEPDHDGALV-VLSNIYAK 565
S++ AC +E G+ I E + D L+ L ++Y+K
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 297 bits (761), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 286/536 (53%), Gaps = 16/536 (2%)
Query: 74 FSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASAL 133
F ++ +P N +++ S P+ L L + G KA S+ +
Sbjct: 80 FGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 134 YLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGY 193
G++IHG K G SD F+Q LI +Y C + +R +FD+M RD+V++N MIDGY
Sbjct: 138 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 194 CQSGNYDQVLKLYE----EMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGL 249
+ G +L++ EMK L + S S G I + +
Sbjct: 198 VKCGLIVSARELFDLMPMEMKN---------LISWNSMISGYAQTSDGVDIASKLFADMP 248
Query: 250 ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQ 309
+++++ YV G ++ A+ L+D + + +V M+ GYAK G V A+ +FDQ
Sbjct: 249 EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQ 308
Query: 310 IVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN-IVPDQITMLSAISACANVGALAQ 368
+ +D+V +++M++GY ++ EAL++F++M+ + ++PD T++ + A A +G L++
Sbjct: 309 MPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSK 368
Query: 369 ARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAM 428
A +H Y + F + ALIDMY+KCG++ A VFE + K++ W++MI A+
Sbjct: 369 AIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAI 428
Query: 429 HGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHE 488
HG SA ++ +++ ++P+ + F+GVL ACSH+GLV+EG F M +H I PR +
Sbjct: 429 HGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 488
Query: 489 HYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILEL 548
HYGCMVD+ R+ + A LIE MP PN +IW + ++AC H E E GE AK ++
Sbjct: 489 HYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQ 548
Query: 549 EPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMM 604
+ + V+LSN+YA W DV +R M + I K S +E++ VH F +
Sbjct: 549 AGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 207/434 (47%), Gaps = 42/434 (9%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRR--IMD-ARLVFDKM--------SHRDAVTW 186
+IHG K G + + T ++ +++ RR + D AR VF + D W
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLW 89
Query: 187 NIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMD 246
N +I + + Q L L M + D L VL AC G + G IH F+
Sbjct: 90 NAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKK 149
Query: 247 NGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFI 306
GL LQ+ L+ +Y+ CG + L+R+++D++ + V +M+ GY K G++ AR +
Sbjct: 150 TGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAREL 209
Query: 307 FD--QIVEKDLVCWSAMISGYAE-SDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV 363
FD + K+L+ W++MISGYA+ SD A KLF +M + D I+ S I
Sbjct: 210 FDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK----DLISWNSMIDGYVKH 265
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMI 423
G + A+ + + R + +ID YAK G + AK +F+ MP ++V++++SM+
Sbjct: 266 GRIEDAKGLFDVMPR----RDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMM 321
Query: 424 NAFAMHGYANSAMNLFHRM-KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH- 481
+ + Y A+ +F M KE + P+ + VL A + G + + + ++ +
Sbjct: 322 AGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQF 381
Query: 482 ------GIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEV 535
G+A ++D+Y + ++ AM + E + ++ W +++ +HG
Sbjct: 382 YLGGKLGVA--------LIDMYSKCGSIQHAMLVFEGIE-NKSIDHWNAMIGGLAIHG-- 430
Query: 536 ELGEFAAKQILELE 549
LGE A +L++E
Sbjct: 431 -LGESAFDMLLQIE 443
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 19/252 (7%)
Query: 305 FIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVG 364
F F ++ +D W+A+I ++ P++AL L M + D+ ++ + AC+ +G
Sbjct: 78 FSFGEV--EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLG 135
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
+ IH + K G L + N LI +Y KCG L ++++F+ MP+++ +S++SMI+
Sbjct: 136 FVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMID 195
Query: 425 AFAMHGYANSAMNLFHRMKEED---IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
+ G SA LF M E I N +I YA + G V+ KLF+ M +
Sbjct: 196 GYVKCGLIVSARELFDLMPMEMKNLISWNSMI---SGYAQTSDG-VDIASKLFADMPEKD 251
Query: 482 GIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFA 541
I+ + M+D Y + + A L + MP +V+ W +++ G V
Sbjct: 252 LIS-----WNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMIDGYAKLGFVH----H 301
Query: 542 AKQILELEPDHD 553
AK + + P D
Sbjct: 302 AKTLFDQMPHRD 313
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 295 bits (755), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 259/417 (62%), Gaps = 11/417 (2%)
Query: 279 LSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLF 338
LS+ L+ +T +L Y+K+G + A +FD++ +D+ W+A+I+G ++ EA++L+
Sbjct: 140 LSADSLLCTT-LLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELY 198
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQARWI-HTYADKNGFGRSLSVNNALIDMYAK 397
M+ I ++T+++A+ AC+++G + + I H Y++ N + V+NA IDMY+K
Sbjct: 199 KRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN-----VIVSNAAIDMYSK 253
Query: 398 CGNLIRAKEVFENMP-RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIG 456
CG + +A +VFE +K+V++W++MI FA+HG A+ A+ +F ++++ I+P+ V ++
Sbjct: 254 CGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLA 313
Query: 457 VLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFA 516
L AC HAGLVE G +F++M + G+ +HYGC+VDL RA LR+A ++I SM
Sbjct: 314 ALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMI 372
Query: 517 PNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIR 576
P+ ++W SL+ A +++ +VE+ E A+++I E+ ++DG V+LSN+YA + RW DVG +R
Sbjct: 373 PDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVR 432
Query: 577 QSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTS 636
M +K + K S +E +H F +D+ H+Q REIY+K++E+ +++ Y T
Sbjct: 433 DDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTG 492
Query: 637 GXXXXXXXXXXXXXXXWHSEKLALCYGL--ISKRRKESCIRIVKNLRICEDCHSFMK 691
+HSEKLA+ YGL + +ES +R++ NLRIC DCH K
Sbjct: 493 LVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFK 549
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 174/398 (43%), Gaps = 46/398 (11%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGX------XXXXXXXXXXXKA 126
+F IP P T+ N ++R + S P Y+ + + KA
Sbjct: 59 IFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKA 118
Query: 127 VSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTW 186
++A ++H ++ G +D + T L+ YS ++ A +FD+M RD +W
Sbjct: 119 CARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASW 178
Query: 187 NIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAI-HEFIM 245
N +I G + ++LY+ M+T + V + L AC H G++ G+ I H +
Sbjct: 179 NALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSN 238
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVS-TAMLSGYAKHGMVKDAR 304
DN + + +A ++MY CG +D A +++++ + K VV+ M++G+A HG
Sbjct: 239 DNVI-----VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHG------ 287
Query: 305 FIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVG 364
+ AL++F++++ I PD ++ L+A++AC + G
Sbjct: 288 -------------------------EAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR-KNVISWSSMI 423
+ + G R++ ++D+ ++ G L A ++ +M + + W S++
Sbjct: 323 LVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNG-VIFIGVLYA 460
A ++ A +KE + +G + + +YA
Sbjct: 383 GASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYA 420
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 11/223 (4%)
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAIS------ACANVGALAQARW 371
W+A+I G+A S P A + M ++ I + A++ ACA +
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
+H ++ G + L+D Y+K G+LI A ++F+ MP ++V SW+++I
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
A+ AM L+ RM+ E I + V + L ACSH G V+EG+ +F N++ I
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVS-----N 245
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE 534
+D+Y + + KA ++ E +V+ W ++++ VHGE
Sbjct: 246 AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGE 288
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 277/488 (56%), Gaps = 6/488 (1%)
Query: 138 EIHGLASKLGF-HSDPFI-QTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
+IH L LG +PF+ QT + S+ + A K+S WN +I G+
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSN 85
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
S N ++ + +Y +M PD + ++ + N G ++H ++ +GL +
Sbjct: 86 SRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFI 145
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
+ L++MY + AR+L+D++ K+LV ++L YAK G V AR +FD++ E+D+
Sbjct: 146 CNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDV 205
Query: 316 VCWSAMISGYAESDQPQEALKLFNEM-QLRNIVPDQITMLSAISACANVGALAQARWIHT 374
V WS+MI GY + + +AL++F++M ++ + +++TM+S I ACA++GAL + + +H
Sbjct: 206 VTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHR 265
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVF--ENMPRKNVISWSSMINAFAMHGYA 432
Y ++ + +LIDMYAKCG++ A VF ++ + + W+++I A HG+
Sbjct: 266 YILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFI 325
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
++ LFH+M+E I+P+ + F+ +L ACSH GLV+E F S+ E G P+ EHY C
Sbjct: 326 RESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYAC 384
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
MVD+ RA L++ A + I MP P + G+L++ C HG +EL E K+++EL+P +
Sbjct: 385 MVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHN 444
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQS 612
DG V L+N+YA +++ +R++M KG+ K S ++++ H F+ D+ H S
Sbjct: 445 DGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHS 504
Query: 613 REIYKKLE 620
+IY L+
Sbjct: 505 DKIYAVLQ 512
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 181/391 (46%), Gaps = 64/391 (16%)
Query: 74 FSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASAL 133
S++ +P + N ++R S S P+ ++ +Y ++ R G K+ S+ S
Sbjct: 65 LSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNR 124
Query: 134 YLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR------------ 181
LG +H K G D FI LI MY + R AR +FD+M H+
Sbjct: 125 KLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAY 184
Query: 182 -------------------DAVTWNIMIDGYCQSGNYDQVLKLYEE-MKTSDTKPDGVIL 221
D VTW+ MIDGY + G Y++ L+++++ M+ +K + V +
Sbjct: 185 AKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTM 244
Query: 222 CTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSS 281
+V+ AC H G L+ GK +H +I+D L L+ LQ++L++MY CG++ A ++ + S
Sbjct: 245 VSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASV 304
Query: 282 KHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEM 341
K E D + W+A+I G A +E+L+LF++M
Sbjct: 305 K-----------------------------ETDALMWNAIIGGLASHGFIRESLQLFHKM 335
Query: 342 QLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNA-LIDMYAKCGN 400
+ I PD+IT L ++AC++ G L + W + K S + A ++D+ ++ G
Sbjct: 336 RESKIDPDEITFLCLLAACSH-GGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGL 394
Query: 401 LIRAKEVFENMPRKNVIS-WSSMINAFAMHG 430
+ A + MP K S +++N HG
Sbjct: 395 VKDAHDFISEMPIKPTGSMLGALLNGCINHG 425
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/558 (29%), Positives = 289/558 (51%), Gaps = 36/558 (6%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGN 198
++G GF + ++ ++ M+ C I+DAR +FD++ R+ ++ +I G+ GN
Sbjct: 145 VYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGN 204
Query: 199 YDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSA 258
Y + +L++ M + + +L A G++ GK +H + G+
Sbjct: 205 YVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGV--------- 255
Query: 259 LVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCW 318
+ N +V+CG +D+ Y+K G ++DAR F+ + EK V W
Sbjct: 256 VDNTFVSCGLIDM----------------------YSKCGDIEDARCAFECMPEKTTVAW 293
Query: 319 SAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADK 378
+ +I+GYA +EAL L +M+ + DQ T+ I + L + H +
Sbjct: 294 NNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIR 353
Query: 379 NGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNL 438
NGF + N AL+D Y+K G + A+ VF+ +PRKN+ISW++++ +A HG A+ L
Sbjct: 354 NGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKL 413
Query: 439 FHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYC 498
F +M ++ PN V F+ VL AC+++GL E+G ++F SM HGI PR HY CM++L
Sbjct: 414 FEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLG 473
Query: 499 RANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVV 558
R LL +A+ I P V +W +L++AC++ +ELG A+++ + P+ G VV
Sbjct: 474 RDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVV 533
Query: 559 LSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQS----RE 614
+ N+Y + + + +++ +KG+S A + VE+ ++ H F+ DR+ + R+
Sbjct: 534 MYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQ 593
Query: 615 IYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCI 674
IY+K++E++ E+ Y+ +HSEKLA+ YGL++ +
Sbjct: 594 IYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNP-L 652
Query: 675 RIVKNLRICEDCHSFMKL 692
+I +N RIC++CH ++
Sbjct: 653 QITQNHRICKNCHKVVEF 670
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 139/308 (45%), Gaps = 35/308 (11%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
+A + ++Y+G ++H A KLG + F+ GLI MYS C I DAR F+ M + V
Sbjct: 232 RASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTV 291
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
WN +I GY G ++ L L +M+ S D L ++ L K H +
Sbjct: 292 AWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASL 351
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDAR 304
+ NG +ALV+ Y G +D AR ++DKL K+++ A++ GYA HG D
Sbjct: 352 IRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTD-- 409
Query: 305 FIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVG 364
A+KLF +M N+ P+ +T L+ +SACA G
Sbjct: 410 -----------------------------AVKLFEKMIAANVAPNHVTFLAVLSACAYSG 440
Query: 365 ALAQARW--IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSS 421
L++ W + ++ +G +I++ + G L A P K ++ W++
Sbjct: 441 -LSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAA 499
Query: 422 MINAFAMH 429
++NA M
Sbjct: 500 LLNACRMQ 507
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%)
Query: 74 FSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASAL 133
F +P T N ++ + + L L +R G + +K + L
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 134 YLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGY 193
L + H + GF S+ T L+ YS R+ AR VFDK+ ++ ++WN ++ GY
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Query: 194 CQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSG 232
G +KL+E+M ++ P+ V VLSAC +SG
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSG 440
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSA-ISACANVGAL 366
D + K V + I ++ +EA +LF +++R ++ A + AC + ++
Sbjct: 80 DTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSI 139
Query: 367 AQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAF 426
+ ++ + NGF + N ++ M+ KCG +I A+ +F+ +P +N+ S+ S+I+ F
Sbjct: 140 RCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGF 199
Query: 427 AMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPR 486
G A LF M EE + F +L A + G + G++L + + G+
Sbjct: 200 VNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCAL-KLGVVDN 258
Query: 487 HEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
++D+Y + + A E MP + W ++++ +HG E
Sbjct: 259 TFVSCGLIDMYSKCGDIEDARCAFECMP-EKTTVAWNNVIAGYALHGYSE 307
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/520 (31%), Positives = 282/520 (54%), Gaps = 42/520 (8%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPF-IQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
AVS + LG + HG SK F P I L+ MYS C + + VF M RD V
Sbjct: 327 AVSALQQVELGRQFHGFVSK-NFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVV 385
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
+WN MI + Q+G D+ L L EM+ K D + + +LSA + N GK H F+
Sbjct: 386 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFL 445
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDAR 304
+ G+ + S L++MY G + ++++L++ SGYA
Sbjct: 446 IRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEG-------------SGYA--------- 482
Query: 305 FIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVG 364
E+D W++MISGY ++ ++ +F +M +NI P+ +T+ S + AC+ +G
Sbjct: 483 -------ERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIG 535
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
++ + +H ++ + +++ V +AL+DMY+K G + A+++F +N +++++MI
Sbjct: 536 SVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMIL 595
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
+ HG A++LF M+E I+P+ + F+ VL ACS++GL++EG K+F M + I
Sbjct: 596 GYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQ 655
Query: 485 PRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVI-IWGSLMSACQVHGEVELGEFAAK 543
P EHY C+ D+ R + +A E ++ + N+ +WGSL+ +C++HGE+EL E ++
Sbjct: 656 PSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSE 715
Query: 544 QILELE--PDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHV 601
++ + + + G V+LSN+YA+E++W V +R+ M KG+ KE S +EI V+
Sbjct: 716 RLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNC 775
Query: 602 FMMADRYHKQSREIYKKLEEVVSELK-------LVSYTPS 634
F+ D+ H S EIY ++ + +++ L + TPS
Sbjct: 776 FVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPS 815
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 224/485 (46%), Gaps = 41/485 (8%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXX--XXXXXXXXKAVSKA 130
+F IP P T N ++ + P L Y ++++ KA ++
Sbjct: 61 LFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAET 120
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMD------ARLVFDKMSHRDAV 184
L G +H + +S + L+ MY +C D R VFD M ++ V
Sbjct: 121 KNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVV 180
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
WN +I Y ++G + + + M + KP V V A +S ++I +
Sbjct: 181 AWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA------VSISRSIKKAN 234
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDAR 304
+ GL L L + YV K L V ++ +S YA+ G ++ +R
Sbjct: 235 VFYGLMLK------LGDEYV-----------------KDLFVVSSAISMYAELGDIESSR 271
Query: 305 FIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNE-MQLRNIVPDQITMLSAISACANV 363
+FD VE+++ W+ MI Y ++D E+++LF E + + IV D++T L A SA + +
Sbjct: 272 RVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSAL 331
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMI 423
+ R H + KN + + N+L+ MY++CG++ ++ VF +M ++V+SW++MI
Sbjct: 332 QQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMI 391
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
+AF +G + + L + M+++ + + + +L A S+ E G++ + +I +
Sbjct: 392 SAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ 451
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESMPFAP-NVIIWGSLMSACQVHGEVELGEFAA 542
Y ++D+Y ++ L+R + +L E +A + W S++S +G E
Sbjct: 452 FEGMNSY--LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVF 509
Query: 543 KQILE 547
+++LE
Sbjct: 510 RKMLE 514
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 161/383 (42%), Gaps = 37/383 (9%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF + D N ++ ++ L L ++++ G A S
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSH--RDAVTWNIMI 190
+G + H + G + + + LI MYS I ++ +F+ + RD TWN MI
Sbjct: 435 KEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMI 493
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
GY Q+G+ ++ ++ +M + +P+ V + ++L AC G++ GK +H F + L
Sbjct: 494 SGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLD 553
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+ + SALV+MY GA+ A +++ + ++ V T M+ GY +HGM
Sbjct: 554 QNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGM----------- 602
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA- 369
+ A+ LF MQ I PD IT ++ +SAC+ G + +
Sbjct: 603 --------------------GERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGL 642
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS--WSSMINAFA 427
+ + S + DM + G + A E + + + I+ W S++ +
Sbjct: 643 KIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCK 702
Query: 428 MHGYANSAMNLFHRMKEEDIEPN 450
+HG A + R+ + D N
Sbjct: 703 LHGELELAETVSERLAKFDKGKN 725
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 291 LSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVP-- 348
LS + G + AR +FD I + V W+ +I G+ ++ P EAL ++ M + P
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM--KKTAPFT 103
Query: 349 --DQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR--- 403
D T S + ACA L + +H + + S V+N+L++MY C N
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 404 ---AKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYA 460
++VF+NM RKNV++W+++I+ + G A F M +++P+ V F+ V A
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 461 CSHAGLVEEGQKLFSSMI 478
S + +++ + M+
Sbjct: 224 VSISRSIKKANVFYGLML 241
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/596 (31%), Positives = 285/596 (47%), Gaps = 75/596 (12%)
Query: 98 PQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTG 157
P +L L+++++R G KA ++ + + +H K F SD F+ T
Sbjct: 33 PVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTA 92
Query: 158 LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQV--------------- 202
+ M+ C + A VF++M RDA TWN M+ G+CQSG+ D+
Sbjct: 93 TVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPD 152
Query: 203 ----------------LKLYEEMKTSDTKPDGVILCTV----LSACGHSGNLSYGKAIHE 242
LKL E M + + TV +S G G+L K + E
Sbjct: 153 SVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFE 212
Query: 243 FIMDNGLALSAHLQSALVNMYVNCGAMD-------LARELY-----------------DK 278
I D G S V A D + RE + +
Sbjct: 213 AI-DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPET 271
Query: 279 LSSKHLVVSTAM--------------LSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISG 324
L+ L+ S A+ +S Y+K AR +FD + + V W+ MISG
Sbjct: 272 LTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISG 331
Query: 325 YAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGR- 383
YAE EAL LF+ M PD +T+LS IS C G+L +WI AD G R
Sbjct: 332 YAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD 391
Query: 384 SLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMK 443
++ + NALIDMY+KCG++ A+++F+N P K V++W++MI +A++G A+ LF +M
Sbjct: 392 NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 444 EEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLL 503
+ D +PN + F+ VL AC+H+G +E+G + F M + I+P +HY CMVDL R L
Sbjct: 452 DLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKL 511
Query: 504 RKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIY 563
+A+ELI +M P+ IWG+L++AC++H V++ E AA+ + LEP V ++NIY
Sbjct: 512 EEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIY 571
Query: 564 AKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKL 619
A W+ IR M + I K S +++N + H F + + H ++ IY L
Sbjct: 572 AAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTL 627
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 155/353 (43%), Gaps = 35/353 (9%)
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
WN+ I + + L L+ EMK +P+ V AC ++ + +H ++
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
+ + +A V+M+V C ++D A ++++++ + AMLSG+ + G
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG------- 132
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA 365
+A LF EM+L I PD +T+++ I + + +
Sbjct: 133 ------------------------HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKS 168
Query: 366 LAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR--KNVISWSSMI 423
L +H + G ++V N I Y KCG+L AK VFE + R + V+SW+SM
Sbjct: 169 LKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMF 228
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
A+++ G A A L+ M E+ +P+ FI + +C + + +G+ + S I+ G
Sbjct: 229 KAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH-LGT 287
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
E + +Y ++ A L + M + + W ++S G+++
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARLLFDIMT-SRTCVSWTVMISGYAEKGDMD 339
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 16/243 (6%)
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
W+ I + P E+L LF EM+ P+ T ACA + + +H +
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
K+ F + V A +DM+ KC ++ A +VFE MP ++ +W++M++ F G+ + A +
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH------EHYG 491
LF M+ +I P+ V + ++ + S E+ KL +M H + R
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAM---HAVGIRLGVDVQVTVAN 192
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVII-WGSLMSACQVHGEV--ELGEFAAKQILEL 548
+ Y + L A + E++ ++ W S+ A V GE G + E
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 549 EPD 551
+PD
Sbjct: 253 KPD 255
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 169/589 (28%), Positives = 298/589 (50%), Gaps = 43/589 (7%)
Query: 81 DTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIH 140
D N +L+ +N L LY+ +R+ G +A L H
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFH 181
Query: 141 GLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYD 200
++G + + L+ +Y R+ DA +F +M R+ ++WN+MI G+ Q + +
Sbjct: 182 TQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCE 241
Query: 201 QVLKLYEEMKTSDTKPDGVILCTVLSA---CGH-------------SGN----------- 233
+K++E M+ + KPD V +VLS CG SGN
Sbjct: 242 SAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFF 301
Query: 234 --------LSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLV 285
LS + +H +++ G ++AL+++Y G + A L+ ++ +K +
Sbjct: 302 SVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIE 361
Query: 286 VSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC--------WSAMISGYAESDQPQEALKL 337
++++ + G + +A +F ++ E + VC W+++I G + ++L+
Sbjct: 362 SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEY 421
Query: 338 FNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAK 397
F +MQ ++ + +T+ +S CA + AL R IH + + ++ V NAL++MYAK
Sbjct: 422 FRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAK 481
Query: 398 CGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGV 457
CG L VFE + K++ISW+S+I + MHG+A A+++F RM P+G+ + V
Sbjct: 482 CGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAV 541
Query: 458 LYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAP 517
L ACSHAGLVE+G+++F SM G+ P+ EHY C+VDL R L++A E++++MP P
Sbjct: 542 LSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEP 601
Query: 518 NVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQ 577
V + G+L+++C++H V++ E A Q+ LEP+ G+ ++LSNIY+ RW + +R
Sbjct: 602 KVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRA 661
Query: 578 SMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSEL 626
K + K SS +E+ + + F + IY LE++VS +
Sbjct: 662 LAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHM 710
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 170/344 (49%), Gaps = 16/344 (4%)
Query: 150 SDPFIQTG-----LIAMYSACRRIMDARLVFDKMSH---RDAVTWNIMIDGYCQSGNYDQ 201
SD ++G LI++Y+ ++DAR VF+ +S D WN ++ G Y+
Sbjct: 82 SDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYEN 141
Query: 202 VLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVN 261
L+LY M+ DG IL +L AC + G +A H ++ GL + H+ + L+
Sbjct: 142 ALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLT 201
Query: 262 MYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI----VEKDLVC 317
+Y G M A L+ ++ ++ + M+ G+++ + A IF+ + + D V
Sbjct: 202 LYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVT 261
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
W++++S +++ + ++ LK F+ M++ + S CA + AL+ A +H Y
Sbjct: 262 WTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVI 321
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
K GF L NALI +Y K G + A+ +F + K + SW+S+I +F G + A++
Sbjct: 322 KGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALS 381
Query: 438 LFHRMKEE----DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSM 477
LF ++E +++ N V + V+ C+ G ++ + F M
Sbjct: 382 LFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 182/387 (47%), Gaps = 20/387 (5%)
Query: 80 PDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEI 139
PD +L S+ ++ L + +R G ++ AL + ++
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKV 316
Query: 140 HGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNY 199
HG K GF + LI +Y ++ DA +F ++ ++ +WN +I + +G
Sbjct: 317 HGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKL 376
Query: 200 DQVLKLYEEMK----TSDTKPDGVILCTVLSACGHSG----NLSYGKAIH-EFIMDNGLA 250
D+ L L+ E++ + K + V +V+ C G +L Y + + ++ N +
Sbjct: 377 DEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVT 436
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKL----SSKHLVVSTAMLSGYAKHGMVKDARFI 306
+ ++++ A++L RE++ + S++++V A+++ YAK G++ + +
Sbjct: 437 I-----CCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLV 491
Query: 307 FDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGAL 366
F+ I +KDL+ W+++I GY ++AL +F+ M PD I +++ +SAC++ G +
Sbjct: 492 FEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLV 551
Query: 367 AQARWI-HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMIN 424
+ R I ++ + + G ++D+ + G L A E+ +NMP + V +++N
Sbjct: 552 EKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLN 611
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNG 451
+ MH + A + ++ + E G
Sbjct: 612 SCRMHKNVDIAEGIASQLSVLEPERTG 638
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 15/252 (5%)
Query: 368 QARWIHTYADKNGF-GRSLSVNNALIDMYAKCGNLIRAKEVFENMP---RKNVISWSSMI 423
Q R +H + F RS S+ LI +YA+ G L+ A+ VFE + ++ W+S++
Sbjct: 71 QCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSIL 130
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
A HG +A+ L+ M++ + +G I +L AC + G + F + + + G+
Sbjct: 131 KANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLC-RAFHTQVIQIGL 189
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFA 541
++ LY +A + A L MP N + W ++ + E + F
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMP-VRNRMSWNVMIKGFSQEYDCESAVKIFE 248
Query: 542 AKQILELEPDHDGALVVLSNIYAKERRWNDV----GLIRQSMANKGISKEKASSRVEINN 597
Q E +PD VLS +++ ++ DV L+R M+ +S E + +
Sbjct: 249 WMQREEFKPDEVTWTSVLS-CHSQCGKFEDVLKYFHLMR--MSGNAVSGEALAVFFSVCA 305
Query: 598 EVHVFMMADRYH 609
E+ +A++ H
Sbjct: 306 ELEALSIAEKVH 317
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 252/456 (55%), Gaps = 41/456 (8%)
Query: 171 ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEM---KTSDTKPDGVILCTVLSA 227
A +FD + ++ ++ MI +S L+ + M + D P + ++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 228 CGHSGNLSYGKAIHEFIMDNGLALS-AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVV 286
C + S GK IH +++ NG+ LS H+Q+ ++ +YV DKL
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVE-----------DKL------- 167
Query: 287 STAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI 346
+ DAR +FD+I + D+V W +++GY E L++F EM +R I
Sbjct: 168 -------------LFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGI 214
Query: 347 VPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS-LSVNNALIDMYAKCGNLIRAK 405
PD+ ++ +A++ACA VGALAQ +WIH + K + S + V AL+DMYAKCG + A
Sbjct: 215 EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAV 274
Query: 406 EVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEED-IEPNGVIFIGVLYACSHA 464
EVFE + R+NV SW+++I +A +GYA A R++ ED I+P+ V+ +GVL AC+H
Sbjct: 275 EVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHG 334
Query: 465 GLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGS 524
G +EEG+ + +M +GI P+HEHY C+VDL CRA L A++LIE MP P +WG+
Sbjct: 335 GFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGA 394
Query: 525 LMSACQVHGEVELGEFAAKQILELEP----DHDGALVVLSNIYAKERRWNDVGLIRQSMA 580
L++ C+ H VELGE A + +L+LE + + ALV LSNIY +R + +R +
Sbjct: 395 LLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIE 454
Query: 581 NKGISKEKASSRVEINNEVHVFMMADRYHKQSREIY 616
+GI K S +E++ V F+ D H +I+
Sbjct: 455 QRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIH 490
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 169/364 (46%), Gaps = 37/364 (10%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTL---FLYQKLRRVGXXXXXXXXXXXXKAVSK 129
+F I P++ + ++R+ SRS P L L K A K
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 130 ASALYLGLEIHGLASKLG-FHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNI 188
A +G +IH K G F SD +QTG++ +Y + + DAR VFD++ D V W++
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 189 MIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNG 248
+++GY + G + L++++EM +PD + T L+AC G L+ GK IHEF+
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 249 LALS-AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIF 307
S + +ALV+MY CG ++ A E+++KL+ +++ A++ GYA +G K A
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCL 308
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
D+I +D I PD + +L ++ACA+ G L
Sbjct: 309 DRIERED------------------------------GIKPDSVVLLGVLAACAHGGFLE 338
Query: 368 QAR-WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMINA 425
+ R + + G + ++D+ + G L A ++ E MP K + S W +++N
Sbjct: 339 EGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
Query: 426 FAMH 429
H
Sbjct: 399 CRTH 402
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 253/436 (58%), Gaps = 1/436 (0%)
Query: 156 TGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTK 215
+ LI+ Y+ C R+ ++R +FD+ S+R + WN MI GY + + L L+ EM+ ++T+
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETR 315
Query: 216 PDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAREL 275
D L V++AC G L GK +H GL + S L++MY CG+ A +L
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 276 YDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEAL 335
+ ++ S ++ +M+ Y G + DA+ +F++I K L+ W++M +G++++ E L
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETL 435
Query: 336 KLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMY 395
+ F++M ++ D++++ S ISACA++ +L + A G V+++LID+Y
Sbjct: 436 EYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLY 495
Query: 396 AKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFI 455
KCG + + VF+ M + + + W+SMI+ +A +G A++LF +M I P + F+
Sbjct: 496 CKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFM 555
Query: 456 GVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPF 515
VL AC++ GLVEEG+KLF SM +HG P EH+ CMVDL RA + +A+ L+E MPF
Sbjct: 556 VVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPF 615
Query: 516 APNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLI 575
+ +W S++ C +G +G+ AA++I+ELEP++ A V LS I+A W L+
Sbjct: 616 DVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALV 675
Query: 576 RQSMANKGISKEKASS 591
R+ M ++K SS
Sbjct: 676 RKLMRENNVTKNPGSS 691
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 212/425 (49%), Gaps = 43/425 (10%)
Query: 171 ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGH 230
AR +F+ M +D VT N ++ GY +G ++ L+L++E+ S D + L TVL AC
Sbjct: 143 ARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS---ADAITLTTVLKACAE 199
Query: 231 SGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAM 290
L GK IH I+ G+ + + S+LVN+Y CG + +A + +++ +A+
Sbjct: 200 LEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSAL 259
Query: 291 LSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQ 350
+SGYA G V ++R +FD+ + ++ W++MISGY ++ EAL LFNEM+ D
Sbjct: 260 ISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDS 318
Query: 351 ITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR------- 403
T+ + I+AC +G L + +H +A K G + V + L+DMY+KCG+ +
Sbjct: 319 RTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSE 378
Query: 404 ------------------------AKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLF 439
AK VFE + K++ISW+SM N F+ +G + F
Sbjct: 379 VESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYF 438
Query: 440 HRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCR 499
H+M + D+ + V V+ AC+ +E G+++F+ G+ ++DLYC+
Sbjct: 439 HQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARA-TIVGLDSDQVVSSSLIDLYCK 497
Query: 500 ANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE----VELGEFAAKQILELEPDHDGA 555
+ + ++M + + W S++S +G+ ++L F + + P
Sbjct: 498 CGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNGQGFEAIDL--FKKMSVAGIRPTQITF 554
Query: 556 LVVLS 560
+VVL+
Sbjct: 555 MVVLT 559
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 142/308 (46%), Gaps = 36/308 (11%)
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMK 210
D + +I +Y +C RI DA+ VF+++ ++ ++WN M +G+ Q+G + L+ + +M
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 211 TSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMD 270
D D V L +V+SAC +L G+ + GL + S+L+++Y CG ++
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVE 502
Query: 271 LARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQ 330
R ++D + V +M+SGYA +G Q
Sbjct: 503 HGRRVFDTMVKSDEVPWNSMISGYATNG-------------------------------Q 531
Query: 331 PQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR-WIHTYADKNGFGRSLSVNN 389
EA+ LF +M + I P QIT + ++AC G + + R + +GF +
Sbjct: 532 GFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFS 591
Query: 390 ALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMINAFAMHGYANSAMNLFHRMKEEDIE 448
++D+ A+ G + A + E MP S WSS++ +GY AM K ++E
Sbjct: 592 CMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGY--KAMGKKAAEKIIELE 649
Query: 449 P-NGVIFI 455
P N V ++
Sbjct: 650 PENSVAYV 657
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 147/359 (40%), Gaps = 96/359 (26%)
Query: 247 NGLALSAHLQSALV-------NMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGM 299
NGL L S++V MY G M +AR L+D++ ++ M+ GY G
Sbjct: 49 NGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGE 108
Query: 300 VKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVP----------- 348
+ FD + E+D W+ ++SG+A++ + A +LFN M +++V
Sbjct: 109 KGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN 168
Query: 349 -----------------DQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNAL 391
D IT+ + + ACA + AL + IH G +N++L
Sbjct: 169 GYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSL 228
Query: 392 IDMYAKCGNL---------IR----------------------AKEVFENMPRKNVISWS 420
+++YAKCG+L IR ++ +F+ + VI W+
Sbjct: 229 VNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWN 288
Query: 421 SMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINE 480
SMI+ + + A+ LF+ M+ E E + + V+ AC G +E G+++
Sbjct: 289 SMISGYIANNMKMEALVLFNEMRNETREDSRTL-AAVINACIGLGFLETGKQM------- 340
Query: 481 HGIAPRHEH---YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
H H +G + D+ + LL + GS M AC++ EVE
Sbjct: 341 ------HCHACKFGLIDDIVVASTLLDMYSKC-------------GSPMEACKLFSEVE 380
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 1/208 (0%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF +I N N + S++ TL + ++ ++ A + S+
Sbjct: 406 VFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISS 465
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L LG ++ A+ +G SD + + LI +Y C + R VFD M D V WN MI G
Sbjct: 466 LELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISG 525
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI-MDNGLAL 251
Y +G + + L+++M + +P + VL+AC + G + G+ + E + +D+G
Sbjct: 526 YATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVP 585
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKL 279
S +V++ G ++ A L +++
Sbjct: 586 DKEHFSCMVDLLARAGYVEEAINLVEEM 613
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 262/483 (54%), Gaps = 17/483 (3%)
Query: 217 DGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAREL- 275
D +L VL +C N H I G L + V Y C LAR L
Sbjct: 29 DHGMLKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLL 88
Query: 276 --YDKLSSK----HLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESD 329
+ LS +L++ + M G + G+ K + +++++ W+ MI GY +
Sbjct: 89 LWFLSLSPGVCNINLIIESLMKIG--ESGLAKK---VLRNASDQNVITWNLMIGGYVRNV 143
Query: 330 QPQEALK-LFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVN 388
Q +EALK L N + +I P++ + S+++ACA +G L A+W+H+ +G + ++
Sbjct: 144 QYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILS 203
Query: 389 NALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIE 448
+AL+D+YAKCG++ ++EVF ++ R +V W++MI FA HG A A+ +F M+ E +
Sbjct: 204 SALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVS 263
Query: 449 PNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAME 508
P+ + F+G+L CSH GL+EEG++ F M I P+ EHYG MVDL RA +++A E
Sbjct: 264 PDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYE 323
Query: 509 LIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERR 568
LIESMP P+V+IW SL+S+ + + ELGE A I L G V+LSNIY+ ++
Sbjct: 324 LIESMPIEPDVVIWRSLLSSSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKK 380
Query: 569 WNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKL 628
W +R+ M+ +GI K K S +E +H F D H +++ IYK LE ++ + K
Sbjct: 381 WESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKS 440
Query: 629 VSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHS 688
+ T +HSEKLAL Y +I K + IRI KN+R+C DCH+
Sbjct: 441 QGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAY-VILKSSPGTEIRIQKNIRMCSDCHN 499
Query: 689 FMK 691
++K
Sbjct: 500 WIK 502
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 149/325 (45%), Gaps = 67/325 (20%)
Query: 137 LEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARL----------------------- 173
L+ H KLG+ + P + +A Y C R AR
Sbjct: 50 LQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLM 109
Query: 174 ----------VFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKT-SDTKPDGVILC 222
V S ++ +TWN+MI GY ++ Y++ LK + M + +D KP+
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 223 TVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK 282
+ L+AC G+L + K +H ++D+G+ L+A L SALV++Y CG + +RE++ +
Sbjct: 170 SSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRN 229
Query: 283 HLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQ 342
+ + AM++G+A HG+ EA+++F+EM+
Sbjct: 230 DVSIWNAMITGFATHGL-------------------------------ATEAIRVFSEME 258
Query: 343 LRNIVPDQITMLSAISACANVGALAQAR-WIHTYADKNGFGRSLSVNNALIDMYAKCGNL 401
++ PD IT L ++ C++ G L + + + + + L A++D+ + G +
Sbjct: 259 AEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRV 318
Query: 402 IRAKEVFENMP-RKNVISWSSMINA 425
A E+ E+MP +V+ W S++++
Sbjct: 319 KEAYELIESMPIEPDVVIWRSLLSS 343
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/456 (34%), Positives = 252/456 (55%), Gaps = 41/456 (8%)
Query: 171 ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEM---KTSDTKPDGVILCTVLSA 227
A +FD + ++ ++ MI +S L+ + M + D P + ++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 228 CGHSGNLSYGKAIHEFIMDNGLALS-AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVV 286
C + S GK IH +++ NG+ LS +H+Q+ ++ +YV DKL
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVE-----------DKL------- 167
Query: 287 STAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI 346
+ DAR +FD+I + D+V W +++GY E L++F EM ++ +
Sbjct: 168 -------------LLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGL 214
Query: 347 VPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS-LSVNNALIDMYAKCGNLIRAK 405
PD+ ++ +A++ACA VGALAQ +WIH + K + S + V AL+DMYAKCG + A
Sbjct: 215 EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAV 274
Query: 406 EVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEED-IEPNGVIFIGVLYACSHA 464
EVF+ + R+NV SW+++I +A +GYA AM R++ ED I+P+ V+ +GVL AC+H
Sbjct: 275 EVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHG 334
Query: 465 GLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGS 524
G +EEG+ + +M + I P+HEHY C+VDL CRA L A+ LIE MP P +WG+
Sbjct: 335 GFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGA 394
Query: 525 LMSACQVHGEVELGEFAAKQILELEP----DHDGALVVLSNIYAKERRWNDVGLIRQSMA 580
L++ C+ H VELGE A K +L+LE + + ALV LSNIY +R + +R +
Sbjct: 395 LLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIE 454
Query: 581 NKGISKEKASSRVEINNEVHVFMMADRYHKQSREIY 616
+G+ K S +E++ V F+ D H +I+
Sbjct: 455 QRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIH 490
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 166/364 (45%), Gaps = 37/364 (10%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTL---FLYQKLRRVGXXXXXXXXXXXXKAVSK 129
+F I P++ + ++R+ SRS P L L K A K
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 130 ASALYLGLEIHGLASKLG-FHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNI 188
A +G +IH K G F SD +QTG++ +Y + ++DAR VFD++ D V W++
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188
Query: 189 MIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNG 248
+++GY + G + L+++ EM +PD + T L+AC G L+ GK IHEF+
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS 248
Query: 249 LALS-AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIF 307
S + +ALV+MY CG ++ A E++ KL+ +++ A++ GYA +G K A
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCL 308
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
+++ +D I PD + +L ++ACA+ G L
Sbjct: 309 ERLERED------------------------------GIKPDSVVLLGVLAACAHGGFLE 338
Query: 368 QAR-WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMINA 425
+ R + + + ++D+ + G L A + E MP K + S W +++N
Sbjct: 339 EGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
Query: 426 FAMH 429
H
Sbjct: 399 CRTH 402
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 280/546 (51%), Gaps = 37/546 (6%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N L+ + +P + + Y+++R G K S A L ++HGLA K
Sbjct: 130 NALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFK 188
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRD-AVTWNIMIDGYCQSGNYDQVLK 204
LGF SD ++ +GL+ YS + DA+ VFD++ RD +V WN +++GY Q ++ L
Sbjct: 189 LGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALL 248
Query: 205 LYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYV 264
++ +M+ + +VLSA SG++ G++IH + G
Sbjct: 249 VFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTG---------------- 292
Query: 265 NCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISG 324
S +VVS A++ Y K +++A IF+ + E+DL W++++
Sbjct: 293 ---------------SGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCV 337
Query: 325 YAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS 384
+ L LF M I PD +T+ + + C + +L Q R IH Y +G
Sbjct: 338 HDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNR 397
Query: 385 LSVN----NALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFH 440
S N N+L+DMY KCG+L A+ VF++M K+ SW+ MIN + + A+++F
Sbjct: 398 KSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFS 457
Query: 441 RMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRA 500
M ++P+ + F+G+L ACSH+G + EG+ + M + I P +HY C++D+ RA
Sbjct: 458 CMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRA 517
Query: 501 NLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLS 560
+ L +A EL S P N ++W S++S+C++HG +L A K++ ELEP+H G V++S
Sbjct: 518 DKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMS 577
Query: 561 NIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLE 620
N+Y + ++ +V +R +M + + K S + + N VH F ++ H + + I+ L
Sbjct: 578 NVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLS 637
Query: 621 EVVSEL 626
V+S +
Sbjct: 638 LVISHM 643
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 187/417 (44%), Gaps = 65/417 (15%)
Query: 73 VFSQIPN-PDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKAS 131
VF ++P+ D+ N L+ S+ ++ L ++ K+R G A + +
Sbjct: 217 VFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSG 276
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWN--IM 189
+ G IHGLA K G SD + LI MY + + +A +F+ M RD TWN +
Sbjct: 277 DIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLC 336
Query: 190 IDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGL 249
+ YC G++D L L+E M S +PD V L TVL CG +L G+ IH +++ +GL
Sbjct: 337 VHDYC--GDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGL 394
Query: 250 ----ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
+ + + ++L++MYV CG + AR ++D +
Sbjct: 395 LNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRV------------------------ 430
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA 365
KD W+ MI+GY + AL +F+ M + PD+IT + + AC++ G
Sbjct: 431 -------KDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGF 483
Query: 366 LAQARWIHTYADKNGFGRSLSVNNAL---------IDMYAKCGNLIRAKEVFENMPR-KN 415
L + R N + +V N L IDM + L A E+ + P N
Sbjct: 484 LNEGR--------NFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDN 535
Query: 416 VISWSSMINAFAMHGYANSAMNLFHRMKEEDIEP---NGVIFIGVLYACSHAGLVEE 469
+ W S++++ +HG + A+ R+ E +EP G + + +Y AG EE
Sbjct: 536 PVVWRSILSSCRLHGNKDLALVAGKRLHE--LEPEHCGGYVLMSNVYV--EAGKYEE 588
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 143/294 (48%), Gaps = 34/294 (11%)
Query: 288 TAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIV 347
T++++ YAK G+++ A +F E+D+ ++A+ISG+ + P +A++ + EM+ I+
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGIL 158
Query: 348 PDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEV 407
PD+ T S + ++ L+ + +H A K GF V + L+ Y+K ++ A++V
Sbjct: 159 PDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKV 217
Query: 408 FENMP-RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGL 466
F+ +P R + + W++++N ++ A+ +F +M+EE + + VL A + +G
Sbjct: 218 FDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGD 277
Query: 467 VEEGQKLFSSMINEHGIAPRHEH------YGCMVDLYCRANLLRKAMELIESMPFAPNVI 520
++ G+ + HG+A + ++D+Y ++ L +A + E+M ++
Sbjct: 278 IDNGRSI-------HGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD-ERDLF 329
Query: 521 IWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGL 574
W S++ G DHDG L + + R + V L
Sbjct: 330 TWNSVLCVHDYCG-----------------DHDGTLALFERMLCSGIRPDIVTL 366
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 256/458 (55%), Gaps = 2/458 (0%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
EIH + H + I++ + A VF + + + + +N MI Y G
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 198 NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
+ L + MK+ D +L +C +L +GK +H ++ G ++
Sbjct: 82 PPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRI 141
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC 317
+V +Y + G M A++++D++S +++VV M+ G+ G V+ +F Q+ E+ +V
Sbjct: 142 GVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVS 201
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
W++MIS ++ + +EAL+LF EM + PD+ T+++ + A++G L +WIH+ A+
Sbjct: 202 WNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAE 261
Query: 378 KNG-FGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAM 436
+G F ++V NAL+D Y K G+L A +F M R+NV+SW+++I+ A++G +
Sbjct: 262 SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGI 321
Query: 437 NLFHRMKEE-DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
+LF M EE + PN F+GVL CS+ G VE G++LF M+ + R EHYG MVD
Sbjct: 322 DLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVD 381
Query: 496 LYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGA 555
L R+ + +A + +++MP N +WGSL+SAC+ HG+V+L E AA +++++EP + G
Sbjct: 382 LMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGN 441
Query: 556 LVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRV 593
V+LSN+YA+E RW DV +R M + K S +
Sbjct: 442 YVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 175/368 (47%), Gaps = 16/368 (4%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VFS I NP+ N +++ S P +L + ++ G K+ S S
Sbjct: 58 VFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSD 117
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L G +HG + GFH I+ G++ +Y++ R+ DA+ VFD+MS R+ V WN+MI G
Sbjct: 118 LRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRG 177
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEF--IMDNGLA 250
+C SG+ ++ L L+++M ++ + LS CG +A+ F ++D G
Sbjct: 178 FCDSGDVERGLHLFKQMSERSIVSWNSMISS-LSKCGRD-----REALELFCEMIDQGFD 231
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL-----VVSTAMLSGYAKHGMVKDARF 305
++ + + G +D + ++ S L V A++ Y K G ++ A
Sbjct: 232 PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATA 291
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEM-QLRNIVPDQITMLSAISACANVG 364
IF ++ +++V W+ +ISG A + + + + LF+ M + + P++ T L ++ C+ G
Sbjct: 292 IFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTG 351
Query: 365 ALAQARWIHTY-ADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSM 422
+ + + ++ A++D+ ++ G + A + +NMP N W S+
Sbjct: 352 QVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSL 411
Query: 423 INAFAMHG 430
++A HG
Sbjct: 412 LSACRSHG 419
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/506 (32%), Positives = 259/506 (51%), Gaps = 32/506 (6%)
Query: 156 TGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKT-SDT 214
+ ++ Y RI+DAR +FD+M+ R+ +TW MIDGY ++G ++ L+ M+ D
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 215 KPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAR- 273
K + L + AC G IH + L L ++L++MY G M A+
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 274 ------------------------------ELYDKLSSKHLVVSTAMLSGYAKHGMVKDA 303
EL++K+ K +V T M+ G++ G +
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 304 RFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV 363
+F + EKD + W+AMIS + + +EAL F++M + + P+ T S +SA A++
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMI 423
L + IH K LSV N+L+ MY KCGN A ++F + N++S+++MI
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMI 511
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
+ ++ +G+ A+ LF ++ EPNGV F+ +L AC H G V+ G K F SM + + I
Sbjct: 512 SGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNI 571
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAK 543
P +HY CMVDL R+ LL A LI +MP P+ +WGSL+SA + H V+L E AAK
Sbjct: 572 EPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAK 631
Query: 544 QILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFM 603
+++ELEPD VVLS +Y+ + D I +K I K+ SS + + EVH F+
Sbjct: 632 KLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFL 691
Query: 604 MADRYHKQSREIYKKLEEVVSELKLV 629
D EI L+ + E++L+
Sbjct: 692 AGDESQLNLEEIGFTLKMIRKEMELI 717
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/519 (23%), Positives = 212/519 (40%), Gaps = 127/519 (24%)
Query: 168 IMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTS-DTKPDGVILCTVLS 226
+ +A +F +MS+R V+W MI Y ++G + ++++EM T + +I + +
Sbjct: 66 LQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKN 125
Query: 227 ACG------------HSGNLSYGKAIHEFI----MDNGLALSAHL---------QSALVN 261
C +SY I F+ D L A + L++
Sbjct: 126 KCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLS 185
Query: 262 MYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAM 321
Y+ G + A ++ ++ K +V ++M+ GY K G + DAR +FD++ E++++ W+AM
Sbjct: 186 GYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAM 245
Query: 322 ISGYAESDQPQEALKLFNEM-QLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNG 380
I GY ++ ++ LF M Q ++ + T+ AC + + IH +
Sbjct: 246 IDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMP 305
Query: 381 FGRSLSVNNALIDMYAKCGNLIRAK-------------------------------EVFE 409
L + N+L+ MY+K G + AK E+FE
Sbjct: 306 LEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFE 365
Query: 410 NMPRKNVIS-------------------------------WSSMINAFAMHGYANSAMNL 438
MP K+++S W++MI+AF +GY A+
Sbjct: 366 KMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCW 425
Query: 439 FHRMKEEDIEPNGVIFIGVLYA-CSHAGLVE----EGQKLFSSMINEHGI---------- 483
FH+M ++++ PN F VL A S A L+E G+ + +++N+ +
Sbjct: 426 FHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCK 485
Query: 484 ---------------APRHEHYGCMVDLYCRANLLRKAMEL---IESMPFAPNVIIWGSL 525
P Y M+ Y +KA++L +ES PN + + +L
Sbjct: 486 CGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLAL 545
Query: 526 MSACQVHGEVELGEFAAKQI-----LELEPDHDGALVVL 559
+SAC G V+LG K + +E PDH +V L
Sbjct: 546 LSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDL 584
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 147/329 (44%), Gaps = 37/329 (11%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G +IHGL S++ D F+ L++MYS + +A+ VF M ++D+V+WN +I G Q
Sbjct: 294 GSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQ 353
Query: 196 SGNYDQVLKLYEEMKTSDTKP-----DGVILCTVLSAC-------GHSGNLSYGKAIHEF 243
+ +L+E+M D G +S C N+++ I F
Sbjct: 354 RKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAF 413
Query: 244 IMDNGLALSA------HLQSALV-NMYVNCGAMDLARELYDKLSS-------------KH 283
+ NG A LQ + N Y + L D +
Sbjct: 414 V-SNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND 472
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL 343
L V +++S Y K G DA IF I E ++V ++ MISGY+ + ++ALKLF+ ++
Sbjct: 473 LSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLES 532
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNN--ALIDMYAKCGNL 401
P+ +T L+ +SAC +VG + W + + K+ + ++ ++D+ + G L
Sbjct: 533 SGKEPNGVTFLALLSACVHVGYVDLG-WKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLL 591
Query: 402 IRAKEVFENMP-RKNVISWSSMINAFAMH 429
A + MP + + W S+++A H
Sbjct: 592 DDASNLISTMPCKPHSGVWGSLLSASKTH 620
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 37/279 (13%)
Query: 280 SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFN 339
+S + + +S +A++G +++A IF Q+ + +V W AMIS YAE+ + +A ++F+
Sbjct: 46 TSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFD 105
Query: 340 EMQLRNI--------------------------VPDQ--ITMLSAISACANVGALAQARW 371
EM +R +P++ ++ + I+ G +A +
Sbjct: 106 EMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEF 165
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
+ YA+ R +N L+ Y + G A VF+ M K V+S SSM++ + G
Sbjct: 166 L--YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGR 223
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
A +LF RM E ++ + + ++ AG E+G LF M E +
Sbjct: 224 IVDARSLFDRMTERNV----ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLA 279
Query: 492 CMVDL---YCRANLLRKAMELIESMPFAPNVIIWGSLMS 527
M + R + L+ MP ++ + SLMS
Sbjct: 280 VMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMS 318
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 2/242 (0%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F +P D ++ + + L + K+ + A + +
Sbjct: 394 LFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLAD 453
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L GL+IHG K+ +D +Q L++MY C DA +F +S + V++N MI G
Sbjct: 454 LIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISG 513
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYG-KAIHEFIMDNGLAL 251
Y +G + LKL+ +++S +P+GV +LSAC H G + G K +
Sbjct: 514 YSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEP 573
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSK-HLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+ +V++ G +D A L + K H V ++LS H V A ++
Sbjct: 574 GPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKL 633
Query: 311 VE 312
+E
Sbjct: 634 IE 635
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 170/603 (28%), Positives = 285/603 (47%), Gaps = 42/603 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF +P DT N +L SR Q + L+ +LR +
Sbjct: 26 VFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGN 85
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFD---------------- 176
+ G +I L + GF + + LI MY C + A VF
Sbjct: 86 VKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLL 145
Query: 177 -----------------KMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGV 219
+M R A WNIMI G+ G + L L++EM S+ KPD
Sbjct: 146 FAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCY 205
Query: 220 ILCTVLSAC-GHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDK 278
++++AC S N+ YG+ +H ++ NG + + ++++++ Y G+ D A +
Sbjct: 206 TFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELES 265
Query: 279 LSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLF 338
+ V +++ K G + A +F EK++V W+ MI+GY + ++AL+ F
Sbjct: 266 IEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFF 325
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC 398
EM + D + + AC+ + L + IH GF V NAL+++YAKC
Sbjct: 326 VEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKC 385
Query: 399 GNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVL 458
G++ A F ++ K+++SW++M+ AF +HG A+ A+ L+ M I+P+ V FIG+L
Sbjct: 386 GDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLL 445
Query: 459 YACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIES----MP 514
CSH+GLVEEG +F SM+ ++ I +H CM+D++ R L +A +L + +
Sbjct: 446 TTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVT 505
Query: 515 FAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGL 574
+ N W +L+ AC H ELG +K + EP + + V+LSN+Y RW +
Sbjct: 506 DSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGED 565
Query: 575 IRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPS 634
+R+ M +G+ K S +E+ N+V F++ D H + E+ + L + E++ P
Sbjct: 566 VRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMR----NPE 621
Query: 635 TSG 637
T G
Sbjct: 622 TFG 624
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 191/413 (46%), Gaps = 38/413 (9%)
Query: 156 TGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTK 215
T IA + RI AR VFD M D V WN M+ Y + G + + + L+ +++ SD K
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 216 PDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAREL 275
PD +LS C GN+ +G+ I ++ +G S + ++L++MY C A ++
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 276 YDKL--SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQE 333
+ + S++ V ++L Y + A +F ++ ++ W+ MISG+A + +
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 334 ALKLFNEMQLRNIVPDQITMLSAISAC-ANVGALAQARWIHTYADKNGFGRSLSVNNALI 392
L LF EM PD T S ++AC A+ + R +H KNG+ ++ N+++
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 393 DMYAKCG--------------------NLI-----------RAKEVFENMPRKNVISWSS 421
Y K G N I +A EVF P KN+++W++
Sbjct: 248 SFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTT 307
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
MI + +G A+ F M + ++ + + VL+ACS L+ G+ + +I H
Sbjct: 308 MITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLI--H 365
Query: 482 GIAPRHEHYG-CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
+ + G +V+LY + +++A + +++ W +++ A VHG
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHG 417
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 144/304 (47%), Gaps = 40/304 (13%)
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL 343
LV T+ ++ AK G + AR +FD + E D V W+ M++ Y+ QEA+ LF +++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR 403
+ PD + + +S CA++G + R I + ++GF SL VNN+LIDMY KC + +
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 404 AKEVFEN---------------------------------MPRKNVISWSSMINAFAMHG 430
A +VF + MP++ +W+ MI+ A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACS-HAGLVEEGQKLFSSMINEHGIAPRHEH 489
S ++LF M E + +P+ F ++ ACS + V G+ + + M+ ++G + E
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVML-KNGWSSAVEA 242
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
++ Y + AM +ES+ V W S++ AC GE E A ++ L
Sbjct: 243 KNSVLSFYTKLGSRDDAMRELESIEVLTQV-SWNSIIDACMKIGETE----KALEVFHLA 297
Query: 550 PDHD 553
P+ +
Sbjct: 298 PEKN 301
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 251/472 (53%), Gaps = 41/472 (8%)
Query: 155 QTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDT 214
Q L M I A VF +M ++ V W MI+GY + + L + D
Sbjct: 31 QMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKD------LVSARRYFDL 84
Query: 215 KPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARE 274
P+ I+ L + +++ Y+ G M AR
Sbjct: 85 SPERDIV---------------------------------LWNTMISGYIEMGNMLEARS 111
Query: 275 LYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEA 334
L+D++ + ++ +L GYA G ++ +FD + E+++ W+ +I GYA++ + E
Sbjct: 112 LFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEV 171
Query: 335 LKLFNEM-QLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGR-SLSVNNALI 392
L F M ++VP+ TM +SACA +GA +W+H Y + G+ + ++V NALI
Sbjct: 172 LGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALI 231
Query: 393 DMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGV 452
DMY KCG + A EVF+ + R+++ISW++MIN A HG+ A+NLFH MK I P+ V
Sbjct: 232 DMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKV 291
Query: 453 IFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIES 512
F+GVL AC H GLVE+G F+SM + I P EH GC+VDL RA L +A+E I
Sbjct: 292 TFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINK 351
Query: 513 MPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDV 572
MP + +IW +L+ A +V+ +V++GE A +++++LEP + V+LSNIY R++D
Sbjct: 352 MPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDA 411
Query: 573 GLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVS 624
++ +M + G KE S +E ++ + F + H ++ E+ + L E+ S
Sbjct: 412 ARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILRELKS 463
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 137/345 (39%), Gaps = 43/345 (12%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXX-XXXXXXXXXKAVSKAS 131
VF +P + N L++ +++ L ++++ G A +K
Sbjct: 143 VFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLG 202
Query: 132 ALYLGLEIHGLASKLGFHS-DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMI 190
A G +H LG++ D ++ LI MY C I A VF + RD ++WN MI
Sbjct: 203 AFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMI 262
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
+G G+ + L L+ EMK S PD V VL AC H G ++++GLA
Sbjct: 263 NGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMG-----------LVEDGLA 311
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
Y N D + + ++ VV +G+ + + FI
Sbjct: 312 ------------YFNSMFTDFS--IMPEIEHCGCVVDLLSRAGF----LTQAVEFINKMP 353
Query: 311 VEKDLVCWSAMISG---YAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
V+ D V W+ ++ Y + D + AL+ +++ RN P MLS I + G
Sbjct: 354 VKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRN--PANFVMLSNIY--GDAGRFD 409
Query: 368 QARWIHTYADKNGFGRSLSV-----NNALIDMYAKCGNLIRAKEV 407
A + GF + V ++ L+ Y+ R +E+
Sbjct: 410 DAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEEL 454
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/493 (31%), Positives = 260/493 (52%), Gaps = 33/493 (6%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G +H K S I++ L+ +YS C DA LVF M +D V W +I G C+
Sbjct: 392 GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCK 451
Query: 196 SGNYDQVLKLYEEMKTSDT--KPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
+G + + LK++ +MK D KPD I+ +V +AC L +G +H ++ GL L+
Sbjct: 452 NGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNV 511
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
+ S+L+++Y CG ++A +++ +S++++V
Sbjct: 512 FVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA--------------------------- 544
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
W++MIS Y+ ++ P+ ++ LFN M + I PD +++ S + A ++ +L + + +H
Sbjct: 545 ----WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLH 600
Query: 374 TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYAN 433
Y + G + NALIDMY KCG A+ +F+ M K++I+W+ MI + HG
Sbjct: 601 GYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCI 660
Query: 434 SAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCM 493
+A++LF MK+ P+ V F+ ++ AC+H+G VEEG+ +F M ++GI P EHY M
Sbjct: 661 TALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANM 720
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHD 553
VDL RA LL +A I++MP + IW L+SA + H VELG +A+++L +EP+
Sbjct: 721 VDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERG 780
Query: 554 GALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSR 613
V L N+Y + N+ + M KG+ K+ S +E+++ +VF
Sbjct: 781 STYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKA 840
Query: 614 EIYKKLEEVVSEL 626
EI+ L + S +
Sbjct: 841 EIFNVLNRLKSNM 853
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 194/395 (49%), Gaps = 36/395 (9%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR-DAVTWNIMIDGYC 194
G +IHG + +D F++T LI MY +DA VF ++ + + V WN+MI G+
Sbjct: 189 GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFG 248
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
SG + L LY K + K L AC S N +G+ IH ++ GL +
Sbjct: 249 GSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPY 308
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
V T++LS Y+K GMV +A +F +V+K
Sbjct: 309 -------------------------------VCTSLLSMYSKCGMVGEAETVFSCVVDKR 337
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
L W+AM++ YAE+D AL LF M+ ++++PD T+ + IS C+ +G + +H
Sbjct: 338 LEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHA 397
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
K + ++ +AL+ +Y+KCG A VF++M K++++W S+I+ +G
Sbjct: 398 ELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKE 457
Query: 435 AMNLFHRMKEED--IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
A+ +F MK++D ++P+ I V AC+ + G ++ SMI + G+
Sbjct: 458 ALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMI-KTGLVLNVFVGSS 516
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMS 527
++DLY + L A+++ SM N++ W S++S
Sbjct: 517 LIDLYSKCGLPEMALKVFTSMS-TENMVAWNSMIS 550
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 196/448 (43%), Gaps = 64/448 (14%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSH---- 180
KA S + L G IHG LG+ DPFI T L+ MY C + A VFD S
Sbjct: 68 KACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSG 127
Query: 181 ---RDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNL--S 235
RD WN MIDGY + + + + + M +PD L V+S GN
Sbjct: 128 VSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRRE 187
Query: 236 YGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYA 295
GK IH F++ N L + L++AL++MY
Sbjct: 188 EGKQIHGFMLRNSLDTDSFLKTALIDMYF------------------------------- 216
Query: 296 KHGMVKDARFIFDQIVEK-DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITML 354
K G+ DA +F +I +K ++V W+ MI G+ S + +L L+ + ++ +
Sbjct: 217 KFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFT 276
Query: 355 SAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK 414
A+ AC+ R IH K G V +L+ MY+KCG + A+ VF + K
Sbjct: 277 GALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDK 336
Query: 415 NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLF 474
+ W++M+ A+A + Y SA++LF M+++ + P+ V+ CS GL G+ +
Sbjct: 337 RLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVH 396
Query: 475 SSMIN---------EHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSL 525
+ + E + + GC D Y L+ K+ME +++ WGSL
Sbjct: 397 AELFKRPIQSTSTIESALLTLYSKCGCDPDAY----LVFKSME-------EKDMVAWGSL 445
Query: 526 MSACQVHGEVELGEFAAKQILELEPDHD 553
+S +G+ + A K +++ D D
Sbjct: 446 ISGLCKNGKFKE---ALKVFGDMKDDDD 470
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 167/370 (45%), Gaps = 40/370 (10%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVT 185
A + AL GL++HG K G + F+ + LI +YS C A VF MS + V
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
WN MI Y ++ + + L+ M + PD V + +VL A + +L GK++H + +
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 604
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
G+ HL++AL++MYV CG A ++ K+ K L+ M+ GY HG
Sbjct: 605 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHG------- 657
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA 365
D I AL LF+EM+ PD +T LS ISAC + G
Sbjct: 658 --DCIT----------------------ALSLFDEMKKAGESPDDVTFLSLISACNHSGF 693
Query: 366 LAQARWIHTYADKN-GFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMI 423
+ + + I + ++ G ++ ++D+ + G L A + MP + S W ++
Sbjct: 694 VEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLL 753
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPN-GVIFIGVLYACSHAGLVEEGQKLFSSMINEHG 482
+A H N + + K +EP G ++ ++ AGL E KL ++ E G
Sbjct: 754 SASRTH--HNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLL-GLMKEKG 810
Query: 483 IAPRHEHYGC 492
+ H+ GC
Sbjct: 811 L---HKQPGC 817
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 178/448 (39%), Gaps = 74/448 (16%)
Query: 179 SHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVI-LCTVLSACGHSGNLSYG 237
S+ + N I Q G Y Q L LY + S V ++L AC NLSYG
Sbjct: 20 SYISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYG 79
Query: 238 KAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKH 297
K IH ++ G + ++LVNMYV CG +D A +++D S VS
Sbjct: 80 KTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSA--------- 130
Query: 298 GMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAI 357
+D+ W++MI GY + + +E + F M + + PD ++ +
Sbjct: 131 ---------------RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVV 175
Query: 358 SACANVGAL--AQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK- 414
S G + + IH + +N + ALIDMY K G I A VF + K
Sbjct: 176 SVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKS 235
Query: 415 NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHA---------- 464
NV+ W+ MI F G S+++L+ K ++ F G L ACS +
Sbjct: 236 NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIH 295
Query: 465 -------------------------GLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCR 499
G+V E + +FS ++++ R E + MV Y
Sbjct: 296 CDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDK-----RLEIWNAMVAAYAE 350
Query: 500 ANLLRKAMELIESM---PFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGAL 556
+ A++L M P+ +++S C V G G+ ++ + P +
Sbjct: 351 NDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK-RPIQSTST 409
Query: 557 V--VLSNIYAKERRWNDVGLIRQSMANK 582
+ L +Y+K D L+ +SM K
Sbjct: 410 IESALLTLYSKCGCDPDAYLVFKSMEEK 437
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 1/201 (0%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF+ + + N ++ SR+ P+ ++ L+ + G A+S ++
Sbjct: 533 VFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTAS 592
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L G +HG +LG SD ++ LI MY C A +F KM H+ +TWN+MI G
Sbjct: 593 LLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYG 652
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI-MDNGLAL 251
Y G+ L L++EMK + PD V +++SAC HSG + GK I EF+ D G+
Sbjct: 653 YGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEP 712
Query: 252 SAHLQSALVNMYVNCGAMDLA 272
+ + +V++ G ++ A
Sbjct: 713 NMEHYANMVDLLGRAGLLEEA 733
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 286 bits (731), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 177/620 (28%), Positives = 301/620 (48%), Gaps = 35/620 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++P D N ++ + L L+ +R + A
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
LG +IH GF D + L MY +A +F +M +D V+W MI G
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y + D+ + Y M KPD + + VLSAC G+L G +H+ + L
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ + L+NMY C +D A ++ F I
Sbjct: 433 VIVANNLINMYSKCKCIDKALDI-------------------------------FHNIPR 461
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
K+++ W+++I+G +++ EAL +M++ + P+ IT+ +A++ACA +GAL + I
Sbjct: 462 KNVISWTSIIAGLRLNNRCFEALIFLRQMKM-TLQPNAITLTAALAACARIGALMCGKEI 520
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H + + G G + NAL+DMY +CG + A F N +K+V SW+ ++ ++ G
Sbjct: 521 HAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQG 579
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
+ + LF RM + + P+ + FI +L CS + +V +G FS M ++G+ P +HY C
Sbjct: 580 SMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYAC 638
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
+VDL RA L++A + I+ MP P+ +WG+L++AC++H +++LGE +A+ I EL+
Sbjct: 639 VVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKS 698
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQS 612
G ++L N+YA +W +V +R+ M G++ + S VE+ +VH F+ D+YH Q+
Sbjct: 699 VGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQT 758
Query: 613 REIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKES 672
+EI LE ++ V T + HSE+ A+ +GLI+
Sbjct: 759 KEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMP 818
Query: 673 CIRIVKNLRICEDCHSFMKL 692
I + KNL +CE+CH +K
Sbjct: 819 -IWVTKNLSMCENCHDTVKF 837
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 204/404 (50%), Gaps = 43/404 (10%)
Query: 154 IQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEM-KTS 212
+ +AM+ ++DA VF KMS R+ +WN+++ GY + G +D+ + LY M
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 213 DTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLA 272
KPD VL CG +L+ GK +H ++ G L + +AL+ MYV CG
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD---- 246
Query: 273 RELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQ 332
VK AR +FD++ +D++ W+AMISGY E+
Sbjct: 247 ---------------------------VKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 333 EALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALI 392
E L+LF M+ ++ PD +T+ S ISAC +G R IH Y GF +SV N+L
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 393 DMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGV 452
MY G+ A+++F M RK+++SW++MI+ + + + A++ + M ++ ++P+ +
Sbjct: 340 QMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEI 399
Query: 453 IFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY----GCMVDLYCRANLLRKAME 508
VL AC+ G ++ G +L ++ I R Y ++++Y + + KA++
Sbjct: 400 TVAAVLSACATLGDLDTGVEL-----HKLAIKARLISYVIVANNLINMYSKCKCIDKALD 454
Query: 509 LIESMPFAPNVIIWGSLMSACQVHGE-VELGEFAAKQILELEPD 551
+ ++P NVI W S+++ +++ E F + + L+P+
Sbjct: 455 IFHNIP-RKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPN 497
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 203/420 (48%), Gaps = 41/420 (9%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G E+H + G+ D + LI MY C + ARL+FD+M RD ++WN MI GY +
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
+G + L+L+ M+ PD + L +V+SAC G+ G+ IH +++ G A+ +
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
++L MY+N G+ A +L+ ++ K +V T M+SGY + +
Sbjct: 335 CNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL---------------- 378
Query: 316 VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTY 375
P +A+ + M ++ PD+IT+ + +SACA +G L +H
Sbjct: 379 ---------------PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 376 ADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSA 435
A K + V N LI+MY+KC + +A ++F N+PRKNVISW+S+I ++ A
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
+ +F R + ++PN + L AC+ G + G+++ + ++ G+ ++D
Sbjct: 484 L-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRT-GVGLDDFLPNALLD 541
Query: 496 LYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE----VELGEFAAKQILELEPD 551
+Y R + A S +V W L++ G+ VEL + K + PD
Sbjct: 542 MYVRCGRMNTAWSQFNSQK--KDVTSWNILLTGYSERGQGSMVVELFDRMVKS--RVRPD 597
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 133/251 (52%), Gaps = 3/251 (1%)
Query: 279 LSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLF 338
+SS + + A L+ + + G + DA ++F ++ E++L W+ ++ GYA+ EA+ L+
Sbjct: 124 MSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 339 NEM-QLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAK 397
+ M + + PD T + C + LA+ + +H + + G+ + V NALI MY K
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 398 CGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGV 457
CG++ A+ +F+ MPR+++ISW++MI+ + +G + + LF M+ ++P+ + V
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 458 LYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAP 517
+ AC G G+ + + +I G A + +Y A R+A +L M
Sbjct: 304 ISACELLGDRRLGRDIHAYVITT-GFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RK 361
Query: 518 NVIIWGSLMSA 528
+++ W +++S
Sbjct: 362 DIVSWTTMISG 372
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 112/233 (48%), Gaps = 5/233 (2%)
Query: 322 ISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGF 381
+ G + + +EA+KL N MQ + D+ ++ + C A + +++ A +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 382 GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHR 441
+ + NA + M+ + GNL+ A VF M +N+ SW+ ++ +A GY + AM L+HR
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 442 M-KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRA 500
M ++P+ F VL C + G+++ ++ +G + ++ +Y +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVV-RYGYELDIDVVNALITMYVKC 244
Query: 501 NLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELG--EFAAKQILELEPD 551
++ A L + MP ++I W +++S +G G F A + L ++PD
Sbjct: 245 GDVKSARLLFDRMP-RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPD 296
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/585 (28%), Positives = 302/585 (51%), Gaps = 42/585 (7%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF +IP+ + N L+ ++ + + L+ +R+ G A +
Sbjct: 230 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG 289
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+ G + H +A G D + T L+ Y I A +VFD+M +D VTWN++I G
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y Q G + + + + M+ K D V L T++SA + NL GK + + + +
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYA----------------- 295
L S +++MY CG++ A++++D K L++ +L+ YA
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 296 ------------------KHGMVKDARFIFDQI----VEKDLVCWSAMISGYAESDQPQE 333
++G V +A+ +F Q+ + +L+ W+ M++G ++ +E
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 529
Query: 334 ALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSL-SVNNALI 392
A+ +MQ + P+ ++ A+SACA++ +L R IH Y +N SL S+ +L+
Sbjct: 530 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 589
Query: 393 DMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGV 452
DMYAKCG++ +A++VF + + ++MI+A+A++G A+ L+ ++ ++P+ +
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNI 649
Query: 453 IFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIES 512
VL AC+HAG + + ++F+ ++++ + P EHYG MVDL A KA+ LIE
Sbjct: 650 TITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEE 709
Query: 513 MPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDV 572
MPF P+ + SL+++C + EL ++ ++++LE EP++ G V +SN YA E W++V
Sbjct: 710 MPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEV 769
Query: 573 GLIRQSMANKGISKEKASSRVEINNE--VHVFMMADRYHKQSREI 615
+R+ M KG+ K+ S ++I E VHVF+ D+ H + EI
Sbjct: 770 VKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEI 814
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 197/398 (49%), Gaps = 35/398 (8%)
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
G +HG K G F+ + L MY C + DA VFD++ R+AV WN ++ GY
Sbjct: 191 FGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV 250
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
Q+G ++ ++L+ +M+ +P V + T LSA + G + GK H + NG+ L
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI 310
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
L ++L+N Y K G+++ A +FD++ EKD
Sbjct: 311 LGTSLLNFY-------------------------------CKVGLIEYAEMVFDRMFEKD 339
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
+V W+ +ISGY + ++A+ + M+L + D +T+ + +SA A L + +
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQC 399
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
Y ++ F + + + ++DMYAKCG+++ AK+VF++ K++I W++++ A+A G +
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGE 459
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV 494
A+ LF+ M+ E + PN + + ++ + G V+E + +F M GI P + M+
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMM 518
Query: 495 DLYCRANLLRKAMELIESMP---FAPNVIIWGSLMSAC 529
+ + +A+ + M PN +SAC
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 194/398 (48%), Gaps = 35/398 (8%)
Query: 133 LYLGLEIHGLASKLG--FHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMI 190
L G +IH K G + + +I+T L+ Y+ C + A ++F K+ R+ +W +I
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAII 145
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
C+ G + L + EM ++ PD ++ V ACG +G+ +H +++ +GL
Sbjct: 146 GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE 205
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+ S+L +MY CG +D A +++D++ ++ V A++ GY ++G
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNG------------ 253
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR 370
+ +EA++LF++M+ + + P ++T+ + +SA AN+G + + +
Sbjct: 254 -------------------KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
H A NG + +L++ Y K G + A+ VF+ M K+V++W+ +I+ + G
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY 490
A+ + M+ E ++ + V ++ A + ++ G+++ I H
Sbjct: 355 LVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCI-RHSFESDIVLA 413
Query: 491 GCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
++D+Y + + A ++ +S ++I+W +L++A
Sbjct: 414 STVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAA 450
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 163/352 (46%), Gaps = 41/352 (11%)
Query: 190 IDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNG- 248
+ C++G + L L EM + + I +L C + +LS GK IH I+ NG
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 249 -LALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIF 307
A + ++++ LV Y C A+++A L+ KL R +F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLR----------------------VRNVF 139
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
W+A+I + AL F EM I PD + + AC GAL
Sbjct: 140 S---------WAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKAC---GALK 187
Query: 368 QARW---IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
+R+ +H Y K+G + V ++L DMY KCG L A +VF+ +P +N ++W++++
Sbjct: 188 WSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMV 247
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
+ +G A+ LF M+++ +EP V L A ++ G VEEG++ + I +G+
Sbjct: 248 GYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI-VNGME 306
Query: 485 PRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
+ +++ YC+ L+ A E++ F +V+ W ++S G VE
Sbjct: 307 LDNILGTSLLNFYCKVGLIEYA-EMVFDRMFEKDVVTWNLIISGYVQQGLVE 357
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 255/484 (52%), Gaps = 35/484 (7%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSA---CRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
+ H K G D F + L+A + + + A + +++ + T N +I Y
Sbjct: 57 QAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYA 116
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
S + L ++ EM PD VL AC G+ IH + +GL
Sbjct: 117 NSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVF 176
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
+++ LVN+Y G ++AR++ D++ + V ++LS Y + G+V +AR +FD++ E++
Sbjct: 177 VENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERN 236
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIV--------------------------- 347
+ W+ MISGYA + +EA ++F+ M +R++V
Sbjct: 237 VESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLD 296
Query: 348 -----PDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLI 402
PD T++S +SACA++G+L+Q W+H Y DK+G + AL+DMY+KCG +
Sbjct: 297 DSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKID 356
Query: 403 RAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACS 462
+A EVF +++V +W+S+I+ ++HG A+ +F M E +PNG+ FIGVL AC+
Sbjct: 357 KALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACN 416
Query: 463 HAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIW 522
H G++++ +KLF M + + + P EHYGCMVDL R + +A EL+ +P I+
Sbjct: 417 HVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILL 476
Query: 523 GSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANK 582
SL+ AC+ G++E E A ++LEL +SN+YA + RW V R++M +
Sbjct: 477 ESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAE 536
Query: 583 GISK 586
+++
Sbjct: 537 RVNR 540
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 8/205 (3%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVT 185
A + +L G +H K G + F+ T L+ MYS C +I A VF S RD T
Sbjct: 313 ACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVST 372
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
WN +I G L+++ EM KP+G+ VLSAC H G L + + E +M
Sbjct: 373 WNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFE-MM 431
Query: 246 DNGLALSAHLQ--SALVNMYVNCGAMDLARELYDKLSSKHL-VVSTAMLSGYAKHGMVKD 302
+ + ++ +V++ G ++ A EL +++ + ++ ++L + G ++
Sbjct: 432 SSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQ 491
Query: 303 ARFIFDQIVEKDLVCWSAMISGYAE 327
A I ++++E +L SGYA+
Sbjct: 492 AERIANRLLELNL----RDSSGYAQ 512
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 165/560 (29%), Positives = 281/560 (50%), Gaps = 43/560 (7%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F Q+ D N ++ + L L ++R G
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCD 260
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L +G +H K GF D ++T LI MY C + + V + + ++D V W +MI G
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
+ G ++ L ++ EM S + + +V+++C G+ G ++H +++ +G L
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
++L+ MY CG +D K LV IF+++ E
Sbjct: 381 TPALNSLITMYAKCGHLD-----------KSLV--------------------IFERMNE 409
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVP-DQITMLSAISACANVGALAQARW 371
+DLV W+A+ISGYA++ +AL LF EM+ + + D T++S + AC++ GAL +
Sbjct: 410 RDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKL 469
Query: 372 IHTYADKNGFGRSLS-VNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
IH ++ F R S V+ AL+DMY+KCG L A+ F+++ K+V+SW +I + HG
Sbjct: 470 IHCIVIRS-FIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHG 528
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY 490
+ A+ ++ +EPN VIF+ VL +CSH G+V++G K+FSSM+ + G+ P HEH
Sbjct: 529 KGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHL 588
Query: 491 GCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEP 550
C+VDL CRA + A + + P++ + G ++ AC+ +G+ E+ + + ++EL+P
Sbjct: 589 ACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKP 648
Query: 551 DHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHK 610
G V L + +A +RW+DV M + G+ K S++E+N + F M H
Sbjct: 649 GDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS 708
Query: 611 QSREIYKKLEEVVSELKLVS 630
++ VS LKL+S
Sbjct: 709 ---------DDTVSLLKLLS 719
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 176/404 (43%), Gaps = 36/404 (8%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
KA + L GL IH GF SD +I + L+ +Y+ + AR VF++M RD V
Sbjct: 54 KACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVV 113
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
W MI Y ++G + L EM+ KP V L +LS L + +H+F
Sbjct: 114 HWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFA 170
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDAR 304
+ G + ++++N+Y C + A++L+D++ + +V M+SGYA G
Sbjct: 171 VIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG------ 224
Query: 305 FIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVG 364
E LKL M+ + PDQ T +++S +
Sbjct: 225 -------------------------NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMC 259
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
L R +H K GF + + ALI MY KCG + V E +P K+V+ W+ MI+
Sbjct: 260 DLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMIS 319
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
G A A+ +F M + + + V+ +C+ G + G + ++ HG
Sbjct: 320 GLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVL-RHGYT 378
Query: 485 PRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
++ +Y + L K++ + E M +++ W +++S
Sbjct: 379 LDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 176/366 (48%), Gaps = 36/366 (9%)
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
+N I+ G++ QVL + M + PD ++L AC LS+G +IH+ ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
NG + ++ S+LVN+Y AK G++ AR
Sbjct: 74 VNGFSSDFYISSSLVNLY-------------------------------AKFGLLAHARK 102
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA 365
+F+++ E+D+V W+AMI Y+ + EA L NEM+ + I P +T+L +S V
Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSG---VLE 159
Query: 366 LAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINA 425
+ Q + +H +A GF ++V N+++++Y KC ++ AK++F+ M +++++SW++MI+
Sbjct: 160 ITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISG 219
Query: 426 FAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAP 485
+A G + + L +RM+ + + P+ F L +E G+ L ++
Sbjct: 220 YASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVD 279
Query: 486 RHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQI 545
H ++ +Y + + ++E++P +V+ W ++S G E ++
Sbjct: 280 MHLKTA-LITMYLKCGKEEASYRVLETIP-NKDVVCWTVMISGLMRLGRAEKALIVFSEM 337
Query: 546 LELEPD 551
L+ D
Sbjct: 338 LQSGSD 343
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/552 (28%), Positives = 274/552 (49%), Gaps = 31/552 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VFS++P + ++ L + + L + ++ R KA +
Sbjct: 165 VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQ 224
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+ G IH GF + + L MY+ C + D +F+ MS RD V+W +I
Sbjct: 225 VKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVA 284
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y + G + ++ + +M+ S P+ ++ SAC L +G+ +H ++ GL S
Sbjct: 285 YKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDS 344
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ ++++ MY CG + VS ++L F +
Sbjct: 345 LSVSNSMMKMYSTCGNL----------------VSASVL---------------FQGMRC 373
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
+D++ WS +I GY ++ +E K F+ M+ P + S +S N+ + R +
Sbjct: 374 RDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQV 433
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H A G ++ +V ++LI+MY+KCG++ A +F R +++S ++MIN +A HG +
Sbjct: 434 HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKS 493
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
A++LF + + P+ V FI VL AC+H+G ++ G F+ M + + P EHYGC
Sbjct: 494 KEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGC 553
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
MVDL CRA L A ++I M + + ++W +L+ AC+ G++E G AA++ILEL+P
Sbjct: 554 MVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTC 613
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQS 612
ALV L+NIY+ + +R++M KG+ KE S ++I + V F+ DR+H QS
Sbjct: 614 ATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQS 673
Query: 613 REIYKKLEEVVS 624
+IY LE VS
Sbjct: 674 EDIYNILELAVS 685
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 216/501 (43%), Gaps = 66/501 (13%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRV--GXXXXXXXXXXXXKAVSKA 130
VF ++P+ D +++ + L L+ +R V KA ++
Sbjct: 62 VFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQS 121
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMI 190
S + G +H A K S ++ + L+ MY +I + VF +M R+AVTW +I
Sbjct: 122 SNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAII 181
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
G +G Y + L + EM S+ D L AC + YGKAIH ++ G
Sbjct: 182 TGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFV 241
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+ + ++L MY CG M L++ +S
Sbjct: 242 TTLCVANSLATMYTECGEMQDGLCLFENMS------------------------------ 271
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR 370
E+D+V W+++I Y Q +A++ F +M+ + P++ T S SACA++ L
Sbjct: 272 -ERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGE 330
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
+H G SLSV+N+++ MY+ CGNL+ A +F+ M +++ISWS++I + G
Sbjct: 331 QLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAG 390
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLF---------------S 475
+ F M++ +P +L + ++E G+++ S
Sbjct: 391 FGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRS 450
Query: 476 SMINEH-------------GIAPRHE--HYGCMVDLYCRANLLRKAMELIE---SMPFAP 517
S+IN + G R + M++ Y ++A++L E + F P
Sbjct: 451 SLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRP 510
Query: 518 NVIIWGSLMSACQVHGEVELG 538
+ + + S+++AC G+++LG
Sbjct: 511 DSVTFISVLTACTHSGQLDLG 531
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 175/363 (48%), Gaps = 36/363 (9%)
Query: 171 ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD--TKPDGVILCTVLSAC 228
AR VFDKM H D V+W +I Y + N D+ L L+ M+ D PD +L VL AC
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 229 GHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVST 288
G S N++YG+++H + + L S ++ S+L++MY G +D
Sbjct: 119 GQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID------------------ 160
Query: 289 AMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVP 348
K R +F ++ ++ V W+A+I+G + + +E L F+EM +
Sbjct: 161 ------------KSCR-VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS 207
Query: 349 DQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVF 408
D T A+ ACA + + + IHT+ GF +L V N+L MY +CG + +F
Sbjct: 208 DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLF 267
Query: 409 ENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVE 468
ENM ++V+SW+S+I A+ G A+ F +M+ + PN F + AC+ +
Sbjct: 268 ENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLV 327
Query: 469 EGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
G++L ++++ G+ M+ +Y L A L + M ++I W +++
Sbjct: 328 WGEQLHCNVLS-LGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMR-CRDIISWSTIIGG 385
Query: 529 -CQ 530
CQ
Sbjct: 386 YCQ 388
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 114/239 (47%), Gaps = 4/239 (1%)
Query: 298 GMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN--IVPDQITMLS 355
G ++ AR +FD++ D+V W+++I Y ++ EAL LF+ M++ + + PD +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 356 AISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKN 415
+ AC +A +H YA K S+ V ++L+DMY + G + ++ VF MP +N
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 416 VISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFS 475
++W+++I G + F M + + F L AC+ V+ G+ + +
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 476 SMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE 534
+I G + +Y ++ + L E+M +V+ W SL+ A + G+
Sbjct: 234 HVI-VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKRIGQ 290
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 181/565 (32%), Positives = 284/565 (50%), Gaps = 41/565 (7%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGN 198
+H L KLGF SD F L+ Y + I AR +FD+M + V+W +I GY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 199 YDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
L ++++M + P+ +V AC GK IH + +GL + + S
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC 317
+LV+MY C ++ AR ++D + GY +++V
Sbjct: 171 SLVDMYGKCNDVETARRVFDS------------MIGYG-----------------RNVVS 201
Query: 318 WSAMISGYAESDQPQEALKLFNEMQ--LRNIVPDQITMLSAISACANVGALAQARWIHTY 375
W++MI+ YA++ + EA++LF L + +Q + S ISAC+++G L + H
Sbjct: 202 WTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGL 261
Query: 376 ADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSA 435
+ G+ + V +L+DMYAKCG+L A+++F + +VIS++SMI A A HG +A
Sbjct: 262 VTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAA 321
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
+ LF M I PN V +GVL+ACSH+GLV EG + S M ++G+ P HY C+VD
Sbjct: 322 VKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVD 381
Query: 496 LYCRANLLRKAMELIESMPFAP--NVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHD 553
+ R + +A EL +++ ++WG+L+SA ++HG VE+ A+K++++
Sbjct: 382 MLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVT 441
Query: 554 GALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSR 613
A + LSN YA W D +R M G KE+A S +E + V+VF D +S
Sbjct: 442 SAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESG 501
Query: 614 EIYKKLEEVVSELK------LVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISK 667
EI + L+++ +K S ++S H E+LAL YGL+
Sbjct: 502 EIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLL-H 560
Query: 668 RRKESCIRIVKNLRICEDCHSFMKL 692
S IRI+ NLR+C DCH KL
Sbjct: 561 LPAGSTIRIMNNLRMCRDCHEAFKL 585
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 161/368 (43%), Gaps = 42/368 (11%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRR-VGXXXXXXXXXXXXKAVSKAS 131
+F ++ P+ ++ + PQN L ++QK+ KA S +
Sbjct: 86 LFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALA 145
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKM--SHRDAVTWNIM 189
+G IH G + + + L+ MY C + AR VFD M R+ V+W M
Sbjct: 146 ESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSM 205
Query: 190 IDGYCQSGNYDQVLKLYEEMK---TSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMD 246
I Y Q+ + ++L+ TSD + + +L +V+SAC G L +GK H +
Sbjct: 206 ITAYAQNARGHEAIELFRSFNAALTSD-RANQFMLASVISACSSLGRLQWGKVAHGLVTR 264
Query: 247 NGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFI 306
G + + ++L++MY CG++ A +++ ++ ++ T+M+ AKHG+
Sbjct: 265 GGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGL------- 317
Query: 307 FDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGAL 366
+ A+KLF+EM I P+ +T+L + AC++ G +
Sbjct: 318 ------------------------GEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLV 353
Query: 367 AQA-RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM---PRKNVISWSSM 422
+ ++ A+K G ++DM + G + A E+ + + + + W ++
Sbjct: 354 NEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGAL 413
Query: 423 INAFAMHG 430
++A +HG
Sbjct: 414 LSAGRLHG 421
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 7/232 (3%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVT 185
A S L G HGL ++ G+ S+ + T L+ MY+ C + A +F ++ ++
Sbjct: 245 ACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVIS 304
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
+ MI + G + +KL++EM P+ V L VL AC HSG ++ G +
Sbjct: 305 YTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMA 364
Query: 246 DN-GLALSAHLQSALVNMYVNCGAMDLARELYDKL---SSKHLVVSTAMLSGYAKHGMVK 301
+ G+ + + +V+M G +D A EL + + + ++ A+LS HG V+
Sbjct: 365 EKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVE 424
Query: 302 DARFIFDQIVEKDLVCWSAMIS---GYAESDQPQEALKLFNEMQLRNIVPDQ 350
++++ + SA I+ YA S +++ L EM+ V ++
Sbjct: 425 IVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKER 476
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 256/502 (50%), Gaps = 37/502 (7%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G+ IH +KLG D ++T L+ MY+ + +A +F M ++ VT+N MI G+ Q
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 196 SGNY-----DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
+ KL+ +M+ +P VL AC + L YG+ IH I N
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+ SAL+ +Y A G +D F
Sbjct: 391 SDEFIGSALIELY-------------------------------ALMGSTEDGMQCFAST 419
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR 370
++D+ W++MI + +++Q + A LF ++ +I P++ T+ +SACA+ AL+
Sbjct: 420 SKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE 479
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
I YA K+G SV + I MYAK GN+ A +VF + +V ++S+MI++ A HG
Sbjct: 480 QIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHG 539
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY 490
AN A+N+F MK I+PN F+GVL AC H GLV +G K F M N++ I P +H+
Sbjct: 540 SANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHF 599
Query: 491 GCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEP 550
C+VDL R L A LI S F + + W +L+S+C+V+ + +G+ A++++ELEP
Sbjct: 600 TCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEP 659
Query: 551 DHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHK 610
+ G+ V+L NIY + +R+ M ++G+ KE A S + I N+ H F +AD H
Sbjct: 660 EASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHP 719
Query: 611 QSREIYKKLEEVVSELKLVSYT 632
S+ IY L E + + V YT
Sbjct: 720 SSQMIYTML-ETMDNVDFVDYT 740
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 194/418 (46%), Gaps = 42/418 (10%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
+ +K+ ++ LG HG K + ++ L+ MY CR + AR +FD+M R+ +
Sbjct: 55 QTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNII 114
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
++N +I GY Q G Y+Q ++L+ E + ++ K D L CG +L G+ +H +
Sbjct: 115 SFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLV 174
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDAR 304
+ NGL+ L + L++MY CG +D A L+D+ +
Sbjct: 175 VVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER---------------------- 212
Query: 305 FIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACA--- 361
DQ V W+++ISGY +E L L +M + + S + AC
Sbjct: 213 ---DQ------VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINL 263
Query: 362 NVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSS 421
N G + + IH Y K G + V AL+DMYAK G+L A ++F MP KNV+++++
Sbjct: 264 NEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNA 323
Query: 422 MINAF-----AMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSS 476
MI+ F ++ A LF M+ +EP+ F VL ACS A +E G+++ +
Sbjct: 324 MISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI-HA 382
Query: 477 MINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE 534
+I ++ +++LY M+ S ++ W S++ C V E
Sbjct: 383 LICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTS-KQDIASWTSMID-CHVQNE 438
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 193/432 (44%), Gaps = 33/432 (7%)
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L LG +HGL G F+ LI MYS C ++ A +FD+ RD V+WN +I G
Sbjct: 164 LDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACG---HSGNLSYGKAIHEFIMDNGL 249
Y + G ++ L L +M L +VL AC + G + G AIH + G+
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 250 ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQ 309
+++AL++MY G++ A +L+ + SK++V AM+SG+ + + D
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD------- 336
Query: 310 IVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
+ EA KLF +MQ R + P T + AC+ L
Sbjct: 337 -------------------EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG 377
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
R IH KN F + +ALI++YA G+ + F + ++++ SW+SMI+ +
Sbjct: 378 RQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQN 437
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
SA +LF ++ I P ++ AC+ + G+++ I + GI
Sbjct: 438 EQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAI-KSGIDAFTSV 496
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFAAKQILE 547
+ +Y ++ + A ++ + P+V + +++S+ HG L F + +
Sbjct: 497 KTSSISMYAKSGNMPLANQVFIEVQ-NPDVATYSAMISSLAQHGSANEALNIFESMKTHG 555
Query: 548 LEPDHDGALVVL 559
++P+ L VL
Sbjct: 556 IKPNQQAFLGVL 567
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 151/354 (42%), Gaps = 41/354 (11%)
Query: 104 LYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYS 163
L+ ++R G KA S A L G +IH L K F SD FI + LI +Y+
Sbjct: 345 LFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYA 404
Query: 164 ACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCT 223
D F S +D +W MID + Q+ + L+ ++ +S +P+ +
Sbjct: 405 LMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSL 464
Query: 224 VLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKH 283
++SAC LS G+ I + + +G+ ++++ ++MY G M LA +++ ++ +
Sbjct: 465 MMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPD 524
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL 343
+ +AM+S A+HG EAL +F M+
Sbjct: 525 VATYSAMISSLAQHG-------------------------------SANEALNIFESMKT 553
Query: 344 RNIVPDQITMLSAISACANVGALAQA-RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLI 402
I P+Q L + AC + G + Q ++ + + L+D+ + G L
Sbjct: 554 HGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLS 613
Query: 403 RAKEV-----FENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNG 451
A+ + F++ P ++W +++++ ++ + + R+ E + E +G
Sbjct: 614 DAENLILSSGFQDHP----VTWRALLSSCRVYKDSVIGKRVAERLMELEPEASG 663
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 97/188 (51%), Gaps = 9/188 (4%)
Query: 361 ANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWS 420
A G++ + H + K+ L + N L++MY KC L A+++F+ MP +N+IS++
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 117
Query: 421 SMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINE 480
S+I+ + G+ AM LF +E +++ + + G L C ++ G+ L ++
Sbjct: 118 SLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGE-LLHGLVVV 176
Query: 481 HGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEF 540
+G++ + ++D+Y + L +AM L + + + W SL+S G V +G
Sbjct: 177 NGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLIS-----GYVRVG-- 228
Query: 541 AAKQILEL 548
AA++ L L
Sbjct: 229 AAEEPLNL 236
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 245/452 (54%), Gaps = 40/452 (8%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDA--VTWNIMIDGY 193
G+ +H L ++ I + L+ +Y++C A VFD+MS RD+ WN +I GY
Sbjct: 111 GVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGY 170
Query: 194 CQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
+ G Y+ + LY +M KPD VL ACG G++ G+AIH ++ G
Sbjct: 171 AELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDV 230
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
++ +ALV MY CG D+ + AR +FD I K
Sbjct: 231 YVLNALVVMYAKCG--DIVK-----------------------------ARNVFDMIPHK 259
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
D V W++M++GY EAL +F M I PD++ + S + A V + R +H
Sbjct: 260 DYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLH 316
Query: 374 TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYAN 433
+ + G LSV NALI +Y+K G L +A +F+ M ++ +SW+++I+A H +
Sbjct: 317 GWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNS 373
Query: 434 SAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCM 493
+ + F +M + +P+G+ F+ VL C++ G+VE+G++LFS M E+GI P+ EHY CM
Sbjct: 374 NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACM 433
Query: 494 VDLYCRANLLRKAMELI-ESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
V+LY RA ++ +A +I + M +WG+L+ AC +HG ++GE AA+++ ELEPD+
Sbjct: 434 VNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDN 493
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGI 584
+ +L IY+K +R DV +RQ M ++G+
Sbjct: 494 EHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 168/382 (43%), Gaps = 46/382 (12%)
Query: 99 QNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGL 158
++ + LY ++ G KA ++ +G IH K GF D ++ L
Sbjct: 177 EDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNAL 236
Query: 159 IAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDG 218
+ MY+ C I+ AR VFD + H+D V+WN M+ GY G + L ++ M + +PD
Sbjct: 237 VVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDK 296
Query: 219 VILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDK 278
V + +VL+ + +G+ +H +++ G+ + +AL+ +Y
Sbjct: 297 VAISSVLARV---LSFKHGRQLHGWVIRRGMEWELSVANALIVLY--------------- 338
Query: 279 LSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLF 338
+K G + A FIFDQ++E+D V W+A+IS ++++ LK F
Sbjct: 339 ----------------SKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYF 379
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKN-GFGRSLSVNNALIDMYAK 397
+M N PD IT +S +S CAN G + + + K G + ++++Y +
Sbjct: 380 EQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGR 439
Query: 398 CGNLIRAKE--VFENMPRKNVISWSSMINAFAMHGYAN----SAMNLFHRMKEEDIEPNG 451
G + A V E W +++ A +HG + +A LF E D E N
Sbjct: 440 AGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFEL--EPDNEHNF 497
Query: 452 VIFIGVLYACSHAGLVEEGQKL 473
+ I + A VE +++
Sbjct: 498 ELLIRIYSKAKRAEDVERVRQM 519
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 152/319 (47%), Gaps = 40/319 (12%)
Query: 212 SDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDL 271
S T+P+ I ++L C + +G +H I L + + S LV +Y +CG ++
Sbjct: 88 SLTEPE--IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEV 145
Query: 272 ARELYDKLSSKH--LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESD 329
A E++D++S + +++SGYA+ G +DA ++ Q+ E
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAED---------------- 189
Query: 330 QPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNN 389
+ PD+ T + AC +G++ IH K GFG + V N
Sbjct: 190 ---------------GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLN 234
Query: 390 ALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEP 449
AL+ MYAKCG++++A+ VF+ +P K+ +SW+SM+ + HG + A+++F M + IEP
Sbjct: 235 ALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEP 294
Query: 450 NGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMEL 509
+ V VL + + G++L +I G+ ++ LY + L +A +
Sbjct: 295 DKVAISSVL---ARVLSFKHGRQLHGWVIRR-GMEWELSVANALIVLYSKRGQLGQACFI 350
Query: 510 IESMPFAPNVIIWGSLMSA 528
+ M + + W +++SA
Sbjct: 351 FDQM-LERDTVSWNAIISA 368
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 277/521 (53%), Gaps = 34/521 (6%)
Query: 74 FSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASAL 133
F ++ + D ++ L+RS + + ++ +++ G + K +
Sbjct: 288 FRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLV 347
Query: 134 YLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR-DAVTWNIMIDG 192
G HG + F D + L++MY + A +F ++S + WN M+ G
Sbjct: 348 PQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKG 407
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y + + + ++L+ +++ + D +V+S+C H G + GK++H +++ L L+
Sbjct: 408 YGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLT 467
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ ++L+++Y G + +A ++ + +
Sbjct: 468 ISVVNSLIDLYGKMGDLTVAWRMFCE--------------------------------AD 495
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
+++ W+AMI+ Y +Q ++A+ LF+ M N P IT+++ + AC N G+L + + I
Sbjct: 496 TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMI 555
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H Y + +LS++ ALIDMYAKCG+L +++E+F+ +K+ + W+ MI+ + MHG
Sbjct: 556 HRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDV 615
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
SA+ LF +M+E D++P G F+ +L AC+HAGLVE+G+KLF M +++ + P +HY C
Sbjct: 616 ESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSC 674
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
+VDL R+ L +A + SMPF+P+ +IWG+L+S+C HGE E+G A++ + +P +
Sbjct: 675 LVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQN 734
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRV 593
DG ++L+N+Y+ +W + R+ M G+ K S V
Sbjct: 735 DGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 213/442 (48%), Gaps = 43/442 (9%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
+A S AL G +HG A K G S F+Q+ + + YS +A L F ++ D
Sbjct: 238 QACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMF 297
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
+W +I +SG+ ++ ++ EM+ PDGV++ +++ G + GKA H F+
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFV 357
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDAR 304
+ + +L + + ++L++MY + +A +L+ ++S
Sbjct: 358 IRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISE----------------------- 394
Query: 305 FIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVG 364
E + W+ M+ GY + + ++LF ++Q I D + S IS+C+++G
Sbjct: 395 -------EGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIG 447
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
A+ + +H Y K ++SV N+LID+Y K G+L A +F NVI+W++MI
Sbjct: 448 AVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIA 506
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
++ + A+ LF RM E+ +P+ + + +L AC + G +E GQ MI+ +
Sbjct: 507 SYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQ-----MIHRYITE 561
Query: 485 PRHEH----YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LG 538
HE ++D+Y + L K+ EL ++ + + W ++S +HG+VE +
Sbjct: 562 TEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN-QKDAVCWNVMISGYGMHGDVESAIA 620
Query: 539 EFAAKQILELEPDHDGALVVLS 560
F + +++P L +LS
Sbjct: 621 LFDQMEESDVKPTGPTFLALLS 642
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/531 (23%), Positives = 224/531 (42%), Gaps = 69/531 (12%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF + D N +++ + +L + + G A ++
Sbjct: 81 VFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLW 140
Query: 133 LYLGLEIHGLASKLG-FHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
++G +HGL K G F + + + YS C + DA LVFD+M RD V W +I
Sbjct: 141 FHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIIS 200
Query: 192 GYCQSGNYDQVLKLYEEMKTSDT---KPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNG 248
G+ Q+G + L +M ++ + KP+ L AC + G L G+ +H F + NG
Sbjct: 201 GHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNG 260
Query: 249 LALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFD 308
LA S +QS +M S Y+K G +A F
Sbjct: 261 LASSKFVQS-------------------------------SMFSFYSKSGNPSEAYLSFR 289
Query: 309 QIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQ 368
++ ++D+ W+++I+ A S +E+ +F EMQ + + PD + + I+ + + Q
Sbjct: 290 ELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQ 349
Query: 369 ARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINAFA 427
+ H + ++ F +V N+L+ MY K L A+++F + + N +W++M+ +
Sbjct: 350 GKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYG 409
Query: 428 MHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINE------H 481
+ LF +++ IE + V+ +CSH G V G+ L ++
Sbjct: 410 KMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTIS 469
Query: 482 GIAPRHEHYGCMVDL------YCRANL-----------------LRKAMELIESM---PF 515
+ + YG M DL +C A+ KA+ L + M F
Sbjct: 470 VVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENF 529
Query: 516 APNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGAL-VVLSNIYAK 565
P+ I +L+ AC G +E G+ + I E E + + +L L ++YAK
Sbjct: 530 KPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAK 580
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 185/421 (43%), Gaps = 38/421 (9%)
Query: 147 GFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLY 206
G + F+ + LI+ Y++ + + VF ++ RD WN +I + +G+Y + L +
Sbjct: 54 GLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFF 113
Query: 207 EEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN-GLALSAHLQSALVNMYVN 265
M S PD V+SAC G +H ++ + G + + ++ V Y
Sbjct: 114 FSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSK 173
Query: 266 CGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGY 325
CG + A ++D++ + +V TA++SG+ ++G E L M S
Sbjct: 174 CGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGE-----------SEGGLGYLCKMHSAG 222
Query: 326 AESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSL 385
++ D+P T+ AC+N+GAL + R +H +A KNG S
Sbjct: 223 SDVDKPNPR-----------------TLECGFQACSNLGALKEGRCLHGFAVKNGLASSK 265
Query: 386 SVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEE 445
V +++ Y+K GN A F + +++ SW+S+I + A G + ++F M+ +
Sbjct: 266 FVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNK 325
Query: 446 DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRK 505
+ P+GV+ ++ LV +G K F + H + ++ +YC+ LL
Sbjct: 326 GMHPDGVVISCLINELGKMMLVPQG-KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSV 384
Query: 506 AMELIESMPFAPNVIIWGSLMSA-----CQVHGEVELGEFAAKQILELEPDHDGALVVLS 560
A +L + N W +++ C V +EL F Q L +E D A V+S
Sbjct: 385 AEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKC-IEL--FRKIQNLGIEIDSASATSVIS 441
Query: 561 N 561
+
Sbjct: 442 S 442
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 156/487 (32%), Positives = 267/487 (54%), Gaps = 39/487 (8%)
Query: 136 GLEIHGLASKLGFHSDPFIQT---GLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
G +HG A + DP ++ L+ +Y+ C ++ D V +S R+ V WN +I
Sbjct: 322 GKSVHGFAVRREL--DPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISL 379
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y G Q L L+ +M T KPD L + +SAC ++G + GK IH ++ ++
Sbjct: 380 YAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-D 438
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+Q++L++MY +K G V A +F+QI
Sbjct: 439 EFVQNSLIDMY-------------------------------SKSGSVDSASTVFNQIKH 467
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
+ +V W++M+ G++++ EA+ LF+ M + +++T L+ I AC+++G+L + +W+
Sbjct: 468 RSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWV 527
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H +G + L + ALIDMYAKCG+L A+ VF M ++++SWSSMINA+ MHG
Sbjct: 528 HHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRI 586
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
SA++ F++M E +PN V+F+ VL AC H+G VEEG+ F +++ G++P EH+ C
Sbjct: 587 GSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF-NLMKSFGVSPNSEHFAC 645
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
+DL R+ L++A I+ MPF + +WGSL++ C++H ++++ + + ++ D
Sbjct: 646 FIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDD 705
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQS 612
G +LSNIYA+E W + +R +M + + K S +EI+ +V F + Q+
Sbjct: 706 TGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQT 765
Query: 613 REIYKKL 619
EIY+ L
Sbjct: 766 DEIYRFL 772
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 198/426 (46%), Gaps = 52/426 (12%)
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMK 210
DP T LI Y+ +RLVF+ + D+ + ++I D + LY +
Sbjct: 33 DPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV 92
Query: 211 TSDTKPDGVILCTVLSAC-GHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAM 269
+ T+ + +VL AC G +LS G +H I+ G+ A
Sbjct: 93 SETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDA---------------- 136
Query: 270 DLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESD 329
V+ T++L Y + G + DA +FD + +DLV WS ++S E+
Sbjct: 137 ---------------VIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 330 QPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNN 389
+ +AL++F M + PD +TM+S + CA +G L AR +H + F ++ N
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 390 ALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEP 449
+L+ MY+KCG+L+ ++ +FE + +KN +SW++MI+++ ++ A+ F M + IEP
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP 301
Query: 450 NGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHE---HYG----CMVDLYCRANL 502
N V VL +C GL+ EG+ + HG A R E +Y +V+LY
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSV-------HGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 503 LRKAMELIESMPFAPNVIIWGSLMSACQVHGEV--ELGEFAAKQILELEPDHDGALVVLS 560
L E + + N++ W SL+S G V LG F ++PD A + S
Sbjct: 355 LSDC-ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPD---AFTLAS 410
Query: 561 NIYAKE 566
+I A E
Sbjct: 411 SISACE 416
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 210/463 (45%), Gaps = 36/463 (7%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF P PD+ L++ + LY +L +A + +
Sbjct: 56 VFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSRE 115
Query: 133 -LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
L +G ++HG K G D I+T L+ MY + DA VFD M RD V W+ ++
Sbjct: 116 HLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVS 175
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
++G + L++++ M +PD V + +V+ C G L +++H I L
Sbjct: 176 SCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDL 235
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
L ++L+ MY CG + + +++K++ K+ V TA
Sbjct: 236 DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTA---------------------- 273
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
MIS Y + ++AL+ F+EM I P+ +T+ S +S+C +G + + +
Sbjct: 274 ---------MISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 372 IHTYADKNGFGRSL-SVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
+H +A + + S++ AL+++YA+CG L + V + +N+++W+S+I+ +A G
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY 490
A+ LF +M + I+P+ + AC +AGLV G+++ +I
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD--VSDEFVQ 442
Query: 491 GCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
++D+Y ++ + A + + +V+ W S++ +G
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHR-SVVTWNSMLCGFSQNG 484
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 134/320 (41%), Gaps = 14/320 (4%)
Query: 34 KQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLRLLS 93
KQIH ++R++ S+ VF+QI + N +L S
Sbjct: 425 KQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSAST---VFNQIKHRSVVTWNSMLCGFS 481
Query: 94 RSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPF 153
++ + L+ + +A S +L G +H G D F
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLF 540
Query: 154 IQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD 213
T LI MY+ C + A VF MS R V+W+ MI+ Y G + + +M S
Sbjct: 541 TDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESG 600
Query: 214 TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAR 273
TKP+ V+ VLSACGHSG++ GK + G++ ++ + +++ G + +
Sbjct: 601 TKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDL---K 657
Query: 274 ELYDKLSSKHLV----VSTAMLSG---YAKHGMVKDARFIFDQIVEKDLVCWSAMISGYA 326
E Y + + V ++++G + K ++K + IV D ++ + + YA
Sbjct: 658 EAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYA 717
Query: 327 ESDQPQEALKLFNEMQLRNI 346
E + +E +L + M+ N+
Sbjct: 718 EEGEWEEFRRLRSAMKSSNL 737
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 272/524 (51%), Gaps = 35/524 (6%)
Query: 171 ARLVFDKMSHRDAVT-WNIMIDGYCQSGNYDQVLKLYEEMKTSD-TKPDGVILCTVLSAC 228
A+L+FD + + WN +I G+ S + + Y M S ++PD L +C
Sbjct: 58 AQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSC 117
Query: 229 GHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVST 288
++ IH ++ +G A +V+T
Sbjct: 118 ERIKSIPKCLEIHGSVIRSGFLDDA-------------------------------IVAT 146
Query: 289 AMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVP 348
+++ Y+ +G V+ A +FD++ +DLV W+ MI ++ +AL ++ M +
Sbjct: 147 SLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCG 206
Query: 349 DQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVF 408
D T+++ +S+CA+V AL +H A + V+NALIDMYAKCG+L A VF
Sbjct: 207 DSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVF 266
Query: 409 ENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVE 468
M +++V++W+SMI + +HG+ A++ F +M + PN + F+G+L CSH GLV+
Sbjct: 267 NGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVK 326
Query: 469 EGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
EG + F M ++ + P +HYGCMVDLY RA L ++E+I + + ++W +L+ +
Sbjct: 327 EGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGS 386
Query: 529 CQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEK 588
C++H +ELGE A K++++LE + G V++++IY+ +R+ + + +
Sbjct: 387 CKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVP 446
Query: 589 ASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXX-XXXXXXX 647
S +EI ++VH F++ D+ H +S IY +L EV++ L Y P S
Sbjct: 447 GWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCL 506
Query: 648 XXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMK 691
HSEKLA+ YGL+ + + +RI KNLR+C DCHSF K
Sbjct: 507 GSADTSHSEKLAIAYGLM-RTTAGTTLRITKNLRVCRDCHSFTK 549
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 155/355 (43%), Gaps = 36/355 (10%)
Query: 79 NPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXX-XXXXXXXXXKAVSKASALYLGL 137
+P T N L+R S S +P N++ Y ++ K+ + ++ L
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
EIHG + GF D + T L+ YSA + A VFD+M RD V+WN+MI + G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 198 NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
++Q L +Y+ M D L +LS+C H L+ G +H D + +
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSN 247
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC 317
AL++MY CG+++ A +++ + + ++ +M+ GY HG
Sbjct: 248 ALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHG------------------- 288
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
EA+ F +M + P+ IT L + C++ G L + H
Sbjct: 289 ------------HGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQG-LVKEGVEHFEIM 335
Query: 378 KNGFGRSLSVNN--ALIDMYAKCGNLIRAKE-VFENMPRKNVISWSSMINAFAMH 429
+ F + +V + ++D+Y + G L + E ++ + ++ + W +++ + +H
Sbjct: 336 SSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIH 390
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 17/257 (6%)
Query: 298 GMVKDARFIFDQI-VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIV-PDQITMLS 355
G + A+ +FD + W+ +I G++ S P ++ +N M L ++ PD T
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 356 AISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKN 415
A+ +C + ++ + IH ++GF V +L+ Y+ G++ A +VF+ MP ++
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 416 VISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFS 475
++SW+ MI F+ G N A++++ RM E + + + +L +C+H + G L
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVML-- 230
Query: 476 SMINEHGIAPRHEHYGC------MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSAC 529
H IA C ++D+Y + L A+ + M +V+ W S++
Sbjct: 231 -----HRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGY 284
Query: 530 QVHGE-VELGEFAAKQI 545
VHG VE F K +
Sbjct: 285 GVHGHGVEAISFFRKMV 301
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 3/205 (1%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++P D N ++ S L +Y+++ G + + SA
Sbjct: 164 VFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSA 223
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L +G+ +H +A + S F+ LI MY+ C + +A VF+ M RD +TWN MI G
Sbjct: 224 LNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIG 283
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y G+ + + + +M S +P+ + +L C H G + G H IM + L+
Sbjct: 284 YGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLT 342
Query: 253 AHLQ--SALVNMYVNCGAMDLAREL 275
+++ +V++Y G ++ + E+
Sbjct: 343 PNVKHYGCMVDLYGRAGQLENSLEM 367
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 278 bits (712), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 166/577 (28%), Positives = 290/577 (50%), Gaps = 67/577 (11%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++P DT N L+ SR+ + L+ + + G +
Sbjct: 107 LFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGF 166
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+ G +HG+A+K G D ++ LI+ YS C + A ++F +M + V+WN MI
Sbjct: 167 VSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGA 226
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSA-------------CGHSGNLSYGKA 239
Y QSG ++ + +++ M + + V + +LSA CG ++S +
Sbjct: 227 YSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTS 286
Query: 240 IHEFIMDNGLALSAHLQ------------SALVNMYVNCGAMDLARELYDK--------- 278
+ G +SA +++V+ Y G MD+A + K
Sbjct: 287 LVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKID 346
Query: 279 -------------------------------LSSKHLVVSTAMLSGYAKHGMVKDARFIF 307
L +K LVV+ +++ Y+K V+ F+F
Sbjct: 347 AVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVN-GLITMYSKFDDVETVLFLF 405
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN-IVPDQITMLSAISACANVGAL 366
+Q+ E L+ W+++ISG +S + A ++F++M L ++PD IT+ S ++ C+ + L
Sbjct: 406 EQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCL 465
Query: 367 AQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAF 426
+ +H Y +N F V ALIDMYAKCGN ++A+ VF+++ +W+SMI+ +
Sbjct: 466 NLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGY 525
Query: 427 AMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPR 486
++ G + A++ + M+E+ ++P+ + F+GVL AC+H G V+EG+ F +MI E GI+P
Sbjct: 526 SLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPT 585
Query: 487 HEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQIL 546
+HY MV L RA L +A+ LI M P+ +WG+L+SAC +H E+E+GE+ A+++
Sbjct: 586 LQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMF 645
Query: 547 ELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKG 583
L+ + G V++SN+YA E W+DV +R M + G
Sbjct: 646 MLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 180/390 (46%), Gaps = 39/390 (10%)
Query: 144 SKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVL 203
+K G +++T L+ +Y + A+++FD+M RD V WN +I GY ++G
Sbjct: 77 TKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAW 136
Query: 204 KLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMY 263
KL+ M P L +L CG G +S G+++H +GL L + +++AL++ Y
Sbjct: 137 KLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFY 196
Query: 264 VNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMIS 323
C + A L+ ++ K V M+ Y++ G+
Sbjct: 197 SKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGL------------------------ 232
Query: 324 GYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGR 383
+EA+ +F M +N+ +T+++ +SA + L H K G
Sbjct: 233 -------QEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVN 279
Query: 384 SLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMK 443
+SV +L+ Y++CG L+ A+ ++ + + +++ +S+++ +A G + A+ F + +
Sbjct: 280 DISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTR 339
Query: 444 EEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLL 503
+ ++ + V +G+L+ C + ++ G L I + G+ + ++ +Y + + +
Sbjct: 340 QLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAI-KSGLCTKTLVVNGLITMYSKFDDV 398
Query: 504 RKAMELIESMPFAPNVIIWGSLMSACQVHG 533
+ L E + P +I W S++S C G
Sbjct: 399 ETVLFLFEQLQETP-LISWNSVISGCVQSG 427
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM---LSAISACANVGALAQA 369
+DL + +++ + + +F ++ ++ P+ TM L A + N L Q
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKL-QV 69
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
+ T+ K+G R + V +L+++Y K G + A+ +F+ MP ++ + W+++I ++ +
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPR 486
GY A LF M ++ P+ + +L C G V +G+ + HG+A +
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV-------HGVAAK 179
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 278 bits (711), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 267/519 (51%), Gaps = 19/519 (3%)
Query: 81 DTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIH 140
+ H N + +SR +P L LY +RR G + LG +H
Sbjct: 11 EFHVSNLIKNHISRG-SPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLH 69
Query: 141 GLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYD 200
+ K G SD + + LI+MY C ++ AR VFD+M R+ TWN MI GY +G+
Sbjct: 70 SESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAV 129
Query: 201 QVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE---FIMDNGLALSAHLQS 257
L+EE+ + V ++ G + + + E F + N A S
Sbjct: 130 LASGLFEEISVCR---NTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSV---- 182
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC 317
++ +YVN M+ AR+ ++ + K+ V + M+SGY + G V +AR IF ++ +DLV
Sbjct: 183 -MLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVI 241
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
W+ +I+GYA++ +A+ F MQ PD +T+ S +SACA G L R +H+ +
Sbjct: 242 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN 301
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
G + V+NALIDMYAKCG+L A VFE++ ++V +SMI+ A+HG A+
Sbjct: 302 HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALE 361
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLY 497
+F M+ D++P+ + FI VL AC H G + EG K+FS M + + P +H+GC++ L
Sbjct: 362 MFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQD-VKPNVKHFGCLIHLL 420
Query: 498 CRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPD-----H 552
R+ L++A L++ M PN + G+L+ AC+VH + E+ E K I+E
Sbjct: 421 GRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITNSYS 479
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASS 591
+ L +SN+YA RW +R M +G+ K S
Sbjct: 480 ENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/497 (30%), Positives = 261/497 (52%), Gaps = 6/497 (1%)
Query: 136 GLEIHGLASKLGFH-SDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
G EIH + + D + LI+ Y+ A F MS +D ++WN ++D +
Sbjct: 349 GKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGL---AL 251
S Q L L + D V + ++L C + + K +H + + GL
Sbjct: 409 DSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEE 468
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVS-TAMLSGYAKHGMVKDARFIFDQI 310
L +AL++ Y CG ++ A +++ LS + +VS ++LSGY G DA+ +F ++
Sbjct: 469 EPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR 370
DL WS M+ YAES P EA+ +F E+Q R + P+ +T+++ + CA + +L R
Sbjct: 529 STTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVR 588
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
H Y + G G + + L+D+YAKCG+L A VF++ R++++ +++M+ +A+HG
Sbjct: 589 QCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHG 647
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY 490
A+ ++ M E +I+P+ V +L AC HAGL+++G +++ S+ HG+ P E Y
Sbjct: 648 RGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQY 707
Query: 491 GCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEP 550
C VDL R L A + MP PN IWG+L+ AC + ++LG A +L+ E
Sbjct: 708 ACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAES 767
Query: 551 DHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHK 610
D G V++SN+YA + +W V +R M K + K S +E++ + +VF+ D H
Sbjct: 768 DDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHP 827
Query: 611 QSREIYKKLEEVVSELK 627
+ I+ + + ++K
Sbjct: 828 RRDSIFDLVNALYLQMK 844
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 188/411 (45%), Gaps = 40/411 (9%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
KA + S L G +HG KLG + + ++ MY+ CRR+ D + +F +M D V
Sbjct: 29 KACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPV 88
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSD-TKPDGVILCTVLSACGHSGNLSYGKAIHEF 243
WNI++ G S + ++ ++ M +D KP V VL C G+ GK++H +
Sbjct: 89 VWNIVLTGLSVSCG-RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSY 147
Query: 244 IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMV-KD 302
I+ GL K +V A++S YAK G + D
Sbjct: 148 IIKAGL-------------------------------EKDTLVGNALVSMYAKFGFIFPD 176
Query: 303 ARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACAN 362
A FD I +KD+V W+A+I+G++E++ +A + F M P+ T+ + + CA+
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Query: 363 VG---ALAQARWIHTYADKNGFGRS-LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS 418
+ A R IH+Y + + ++ + V N+L+ Y + G + A +F M K+++S
Sbjct: 237 MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVS 296
Query: 419 WSSMINAFAMHGYANSAMNLFHRMKEE-DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSM 477
W+ +I +A + A LFH + + D+ P+ V I +L C+ + G+++ S +
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Query: 478 INEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
+ + ++ Y R A M ++I W +++ A
Sbjct: 357 LRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMS-TKDIISWNAILDA 406
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 2/137 (1%)
Query: 343 LRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLI 402
L D L + ACA+V L R +H K G V+ ++++MYAKC +
Sbjct: 14 LSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMD 73
Query: 403 RAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEED-IEPNGVIFIGVLYAC 461
+++F M + + W+ ++ ++ M F M D +P+ V F VL C
Sbjct: 74 DCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 462 SHAGLVEEGQKLFSSMI 478
G G+ + S +I
Sbjct: 133 VRLGDSYNGKSMHSYII 149
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 289/525 (55%), Gaps = 48/525 (9%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
E L ++ + T +++ Y +++ A ++F +M R+ V+WN MIDGY QSG
Sbjct: 95 EARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSG 154
Query: 198 NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
D+ L+L++EM + V +++ A G + + E + + +
Sbjct: 155 RIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS----WT 206
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDAR------------- 304
A+V+ G +D AR L+D + ++++ AM++GYA++ + +A
Sbjct: 207 AMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS 266
Query: 305 -------FI-----------FDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN- 345
FI FD++ EK+++ W+ MI+GY E+ + +EAL +F++M LR+
Sbjct: 267 WNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM-LRDG 325
Query: 346 -IVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRA 404
+ P+ T +S +SAC+++ L + + IH K+ ++ V +AL++MY+K G LI A
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA 385
Query: 405 KEVFEN--MPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACS 462
+++F+N + ++++ISW+SMI +A HG+ A+ ++++M++ +P+ V ++ +L+ACS
Sbjct: 386 RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACS 445
Query: 463 HAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIW 522
HAGLVE+G + F ++ + + R EHY C+VDL RA L+ I + +
Sbjct: 446 HAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFY 505
Query: 523 GSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANK 582
G+++SAC VH EV + + K++LE D G V++SNIYA + + +R M K
Sbjct: 506 GAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEK 565
Query: 583 GISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELK 627
G+ K+ S V++ + H+F++ D+ H Q ++ L+ ++S+L+
Sbjct: 566 GLKKQPGCSWVKVGKQNHLFVVGDKSHPQ----FEALDSILSDLR 606
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 192/385 (49%), Gaps = 32/385 (8%)
Query: 158 LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPD 217
LI +I +AR +FD + RD VTW +I GY + G+ + +L++ + D++ +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKN 108
Query: 218 GVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYD 277
V ++S S LS + + + + + + + +++ Y G +D A EL+D
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS----WNTMIDGYAQSGRIDKALELFD 164
Query: 278 KLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKL 337
++ +++V +M+ + G + +A +F+++ +D+V W+AM+ G A++ + EA +L
Sbjct: 165 EMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRL 224
Query: 338 FNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAK 397
F+ M RNI I+ + I+ A + +A + + R + N +I + +
Sbjct: 225 FDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMPE----RDFASWNTMITGFIR 276
Query: 398 CGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRM-KEEDIEPNGVIFIG 456
+ +A +F+ MP KNVISW++MI + + A+N+F +M ++ ++PN ++
Sbjct: 277 NREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVS 336
Query: 457 VLYACSH-AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPF 515
+L ACS AGLV EGQ++ H + + H + N+ K+ ELI +
Sbjct: 337 ILSACSDLAGLV-EGQQI-------HQLISKSVHQKNEIVTSALLNMYSKSGELIAARKM 388
Query: 516 APN-------VIIWGSLMSACQVHG 533
N +I W S+++ HG
Sbjct: 389 FDNGLVCQRDLISWNSMIAVYAHHG 413
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 29/239 (12%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDK--MSHRDA 183
A S + L G +IH L SK + + + L+ MYS ++ AR +FD + RD
Sbjct: 340 ACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDL 399
Query: 184 VTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYG-KAIHE 242
++WN MI Y G+ + +++Y +M+ KP V +L AC H+G + G + +
Sbjct: 400 ISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKD 459
Query: 243 FIMDNGLALSAHLQSALVNM------------YVNCGAMDLARELYDKLSSKHLVVSTAM 290
+ D L L + LV++ ++NC L+R Y A+
Sbjct: 460 LVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFY-----------GAI 508
Query: 291 LSGYAKHGMVKDARFIFDQIVE---KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI 346
LS H V A+ + +++E D + M + YA + + +EA ++ +M+ + +
Sbjct: 509 LSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGL 567
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/553 (28%), Positives = 277/553 (50%), Gaps = 36/553 (6%)
Query: 174 VFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGN 233
+F R+ N +I G ++ ++ ++ + M KPD + VL + G
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 234 LSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELY----DKLSSKHLVVSTA 289
G+A+H + N + + ++ +LV+MY G + A +++ D++ + +++
Sbjct: 142 RWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNV 201
Query: 290 MLSGYAK-------------------------------HGMVKDARFIFDQIVEKDLVCW 318
+++GY + G + A+ +F+ + EK++V W
Sbjct: 202 LINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSW 261
Query: 319 SAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADK 378
+ +I+G++++ + A+ + EM + + P++ T+ + +SAC+ GAL IH Y
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD 321
Query: 379 NGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNL 438
NG ++ AL+DMYAKCG L A VF NM K+++SW++MI +A+HG + A+
Sbjct: 322 NGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381
Query: 439 FHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYC 498
F +M +P+ V+F+ VL AC ++ V+ G F SM ++ I P +HY +VDL
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLG 441
Query: 499 RANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVV 558
RA L +A EL+E+MP P++ W +L AC+ H E ++ +LEL+P+ G+ +
Sbjct: 442 RAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIF 501
Query: 559 LSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKK 618
L +A + DV R S+ + + S +E++ +++ F D HK ++EI K
Sbjct: 502 LDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLK 561
Query: 619 LEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVK 678
L+E++S Y P HSEKLAL G + + + IRI+K
Sbjct: 562 LDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFL-RTAPGTTIRIIK 620
Query: 679 NLRICEDCHSFMK 691
NLRIC DCHS MK
Sbjct: 621 NLRICGDCHSLMK 633
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 38/320 (11%)
Query: 148 FHSDPFIQTG----LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVL 203
F S P +G LI Y + A+ +F+ M ++ V+W +I+G+ Q+G+Y+ +
Sbjct: 219 FRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAI 278
Query: 204 KLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMY 263
Y EM KP+ + VLSAC SG L G IH +I+DNG+ L + +ALV+MY
Sbjct: 279 STYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMY 338
Query: 264 VNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMIS 323
CG +D A ++ ++ K ++ TAM+ G+A HG RF
Sbjct: 339 AKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHG-----RF------------------ 375
Query: 324 GYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA-RWIHTYADKNGFG 382
+A++ F +M PD++ L+ ++AC N + + +
Sbjct: 376 --------HQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIE 427
Query: 383 RSLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMHGYANSAMNLFHR 441
+L ++D+ + G L A E+ ENMP ++ +W+++ A H A ++
Sbjct: 428 PTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQN 487
Query: 442 MKEEDIEPNG-VIFIGVLYA 460
+ E D E G IF+ +A
Sbjct: 488 LLELDPELCGSYIFLDKTHA 507
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 2/244 (0%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F +P + L+ S++ + + Y ++ G A SK+ A
Sbjct: 249 LFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGA 308
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L G+ IHG G D I T L+ MY+ C + A VF M+H+D ++W MI G
Sbjct: 309 LGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQG 368
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI-MDNGLAL 251
+ G + Q ++ + +M S KPD V+ VL+AC +S + G + + +D +
Sbjct: 369 WAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEP 428
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLS-SKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+ +V++ G ++ A EL + + + L A+ H + A + +
Sbjct: 429 TLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNL 488
Query: 311 VEKD 314
+E D
Sbjct: 489 LELD 492
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 273 bits (699), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/495 (31%), Positives = 250/495 (50%), Gaps = 34/495 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F + N + N ++R S S P+ ++ +LR G K+ S+
Sbjct: 81 IFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELC 140
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR-DAVTWNIMID 191
+ +G +HG+A + GF ++ LI Y C +I DAR VFD+M DAVT++ +++
Sbjct: 141 VSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMN 200
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
GY Q L L+ M+ S+ + L + LSA G+LS ++ H + GL L
Sbjct: 201 GYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL 260
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
HL +AL+ MY K G + AR IFD +
Sbjct: 261 DLHLITALIGMY-------------------------------GKTGGISSARRIFDCAI 289
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
KD+V W+ MI YA++ +E + L +M+ + P+ T + +S+CA A R
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRT 349
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
+ ++ + AL+DMYAK G L +A E+F M K+V SW++MI+ + HG
Sbjct: 350 VADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGL 409
Query: 432 ANSAMNLFHRMKEED--IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
A A+ LF++M+EE+ + PN + F+ VL ACSH GLV EG + F M+ + P+ EH
Sbjct: 410 AREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEH 469
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
YGC+VDL RA L +A ELI ++P + W +L++AC+V+G +LGE ++ E+
Sbjct: 470 YGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMG 529
Query: 550 PDHDGALVVLSNIYA 564
H ++L+ +A
Sbjct: 530 ETHPADAILLAGTHA 544
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 189/395 (47%), Gaps = 33/395 (8%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGN 198
IHG K G D F + L+A +S+ I A +F+ +S+ + +N MI GY S
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 199 YDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSA 258
++ ++ +++ D T L +C +S G+ +H + +G + L++A
Sbjct: 106 PERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNA 165
Query: 259 LVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCW 318
L++ Y CG + AR+++D++ D V +
Sbjct: 166 LIHFYCVCGKISDARKVFDEMPQS------------------------------VDAVTF 195
Query: 319 SAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADK 378
S +++GY + + AL LF M+ +V + T+LS +SA +++G L+ A H K
Sbjct: 196 STLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIK 255
Query: 379 NGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNL 438
G L + ALI MY K G + A+ +F+ RK+V++W+ MI+ +A G + L
Sbjct: 256 IGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWL 315
Query: 439 FHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYC 498
+MK E ++PN F+G+L +C+++ G+ + + ++ E IA +VD+Y
Sbjct: 316 LRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTV-ADLLEEERIALDAILGTALVDMYA 374
Query: 499 RANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
+ LL KA+E+ M +V W +++S HG
Sbjct: 375 KVGLLEKAVEIFNRMK-DKDVKSWTAMISGYGAHG 408
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 147/315 (46%), Gaps = 41/315 (13%)
Query: 300 VKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISA 359
++ A IF+ + +L ++ MI GY+ SD+P+ A +FN+++ + + D+ + ++ + +
Sbjct: 75 IRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKS 134
Query: 360 CANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-NVIS 418
C+ ++ +H A ++GF + NALI Y CG + A++VF+ MP+ + ++
Sbjct: 135 CSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVT 194
Query: 419 WSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQK------ 472
+S+++N + A++LF M++ ++ N + L A S G + +
Sbjct: 195 FSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCI 254
Query: 473 ---------LFSSMINEHG-------------IAPRHE--HYGCMVDLYCRANLLRKAME 508
L +++I +G A R + + CM+D Y + LL + +
Sbjct: 255 KIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVW 314
Query: 509 LIESMPF---APNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGAL-VVLSNIYA 564
L+ M + PN + L+S+C +G A + E D L L ++YA
Sbjct: 315 LLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYA 374
Query: 565 KERRWNDVGLIRQSM 579
K VGL+ +++
Sbjct: 375 K------VGLLEKAV 383
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/547 (28%), Positives = 285/547 (52%), Gaps = 19/547 (3%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N L+ +++ + + Y+++ G KA + + G +HG
Sbjct: 113 NVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEV 172
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL 205
+ S ++ LI+MY R + AR +FD+M RDAV+WN +I+ Y G + + +L
Sbjct: 173 SSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFEL 232
Query: 206 YEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVN 265
+++M S + + + C +GN Y A+ S + ++ +
Sbjct: 233 FDKMWFSGVEVSVITWNIISGGCLQTGN--YVGALGLISRMRNFPTSLDPVAMIIGLKA- 289
Query: 266 C---GAMDLAREL--------YDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
C GA+ L +E+ YD + + V +++ Y+K ++ A +F Q E
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDN----VRNTLITMYSKCKDLRHALIVFRQTEENS 345
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
L W+++ISGYA+ ++ +EA L EM + P+ IT+ S + CA + L + H
Sbjct: 346 LCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHC 405
Query: 375 YA-DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYAN 433
Y + F + N+L+D+YAK G ++ AK+V + M +++ ++++S+I+ + G
Sbjct: 406 YILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGG 465
Query: 434 SAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCM 493
A+ LF M I+P+ V + VL ACSH+ LV EG++LF M E+GI P +H+ CM
Sbjct: 466 VALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCM 525
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHD 553
VDLY RA L KA ++I +MP+ P+ W +L++AC +HG ++G++AA+++LE++P++
Sbjct: 526 VDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENP 585
Query: 554 GALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSR 613
G V+++N+YA W+ + +R M + G+ K+ + ++ ++ +F + D ++
Sbjct: 586 GYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEAC 645
Query: 614 EIYKKLE 620
Y L+
Sbjct: 646 NTYPLLD 652
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 212/437 (48%), Gaps = 11/437 (2%)
Query: 132 ALYLGLEIHG--LASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIM 189
A G+++H ++S + +HS + L+ YSA +A+ + + + WN++
Sbjct: 58 AFLAGVQVHAHCISSGVEYHS--VLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVL 115
Query: 190 IDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGL 249
I Y ++ +++V+ Y+ M + +PD +VL ACG + ++++G+ +H I +
Sbjct: 116 IASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSY 175
Query: 250 ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQ 309
S ++ +AL++MY M +AR L+D++ + V A+++ YA GM +A +FD+
Sbjct: 176 KSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDK 235
Query: 310 I----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA 365
+ VE ++ W+ + G ++ AL L + M+ D + M+ + AC+ +GA
Sbjct: 236 MWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGA 295
Query: 366 LAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINA 425
+ + IH A + + +V N LI MY+KC +L A VF ++ +W+S+I+
Sbjct: 296 IRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISG 355
Query: 426 FAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAP 485
+A + A +L M +PN + +L C+ ++ G++ ++
Sbjct: 356 YAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKD 415
Query: 486 RHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE--VELGEFAAK 543
+ +VD+Y ++ + A ++ + M + + + SL+ GE V L F
Sbjct: 416 YTMLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQGEGGVALALFKEM 474
Query: 544 QILELEPDHDGALVVLS 560
++PDH + VLS
Sbjct: 475 TRSGIKPDHVTVVAVLS 491
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 243/458 (53%), Gaps = 39/458 (8%)
Query: 154 IQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD 213
I L+ Y C +++DAR VFD+M RD +MI ++G Y + L + EM
Sbjct: 53 IAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDG 112
Query: 214 TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAR 273
K D I+ ++L A + + +GK IH ++ A + S+L++MY G + AR
Sbjct: 113 LKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNAR 172
Query: 274 ELYDKLSSKHLVVSTAMLSGYAKHG-------MVKDARFI-------------------- 306
+++ L + LVV AM+SGYA + +VKD + +
Sbjct: 173 KVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMR 232
Query: 307 ----FDQIVE--------KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITML 354
+I+E D+V W+++ISG + Q ++A F +M + P+ T++
Sbjct: 233 NEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATII 292
Query: 355 SAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK 414
+ + AC + + + IH Y+ G V +AL+DMY KCG + A +F P+K
Sbjct: 293 TLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK 352
Query: 415 NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLF 474
++++SMI +A HG A+ A+ LF +M+ + + + F +L ACSHAGL + GQ LF
Sbjct: 353 TTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLF 412
Query: 475 SSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE 534
M N++ I PR EHY CMVDL RA L +A E+I++M P++ +WG+L++AC+ HG
Sbjct: 413 LLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGN 472
Query: 535 VELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDV 572
+EL AAK + ELEP++ G ++L+++YA W V
Sbjct: 473 MELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 169/400 (42%), Gaps = 43/400 (10%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++P D C ++ +R+ Q +L ++++ + G KA
Sbjct: 73 VFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLD 132
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
G IH L K + SD FI + LI MYS + +AR VF + +D V +N MI G
Sbjct: 133 REFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISG 192
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNG---- 248
Y + D+ L L ++MK KPD + ++S H N I E + +G
Sbjct: 193 YANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPD 252
Query: 249 LALSAHLQSALVNMYVNCGAMD-----LARELYDKLSS---------------------- 281
+ + S LV+ + N A D L LY ++
Sbjct: 253 VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHG 312
Query: 282 --------KHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQE 333
H V +A+L Y K G + +A +F + +K V +++MI YA +
Sbjct: 313 YSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADK 372
Query: 334 ALKLFNEMQLRNIVPDQITMLSAISACANVGA--LAQARWIHTYADKNGFGRSLSVNNAL 391
A++LF++M+ D +T + ++AC++ G L Q ++ +K L +
Sbjct: 373 AVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFL-LMQNKYRIVPRLEHYACM 431
Query: 392 IDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMHG 430
+D+ + G L+ A E+ + M + ++ W +++ A HG
Sbjct: 432 VDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 172/414 (41%), Gaps = 47/414 (11%)
Query: 224 VLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKH 283
++ A G G+ +H ++ +G+A + + LV YV CG + AR+++D++ +
Sbjct: 22 LIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRD 81
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL 343
+ M+ A++G QE+L F EM
Sbjct: 82 ISGCVVMIGACARNGYY-------------------------------QESLDFFREMYK 110
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR 403
+ D + S + A N+ + IH K + + ++LIDMY+K G +
Sbjct: 111 DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGN 170
Query: 404 AKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
A++VF ++ ++++ +++MI+ +A + A+ A+NL MK I+P+ + + ++ SH
Sbjct: 171 ARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVI 520
E+ ++ M + G P + ++ KA + + M PN
Sbjct: 231 MRNEEKVSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSA 289
Query: 521 IWGSLMSACQVHGEVELG-EFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSM 579
+L+ AC ++ G E ++ DH L ++Y K G I ++M
Sbjct: 290 TIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGK------CGFISEAM 343
Query: 580 ANKGISKEKASSRVEINNEVHVFMMADR-YHKQSREIYKKLEEVVSELKLVSYT 632
I K + + +F A+ ++ E++ ++E +L +++T
Sbjct: 344 ----ILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFT 393
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 92/232 (39%), Gaps = 49/232 (21%)
Query: 341 MQLRNIVPDQITMLSA------ISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDM 394
M+ IVP +LS I A + R +H + +G R + L+
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 395 YAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIF 454
Y +CG ++ A++VF+ MP++++ MI A A +GY +++ F M ++ ++ + I
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 455 IGVLYAC-----------------------------------SHAGLVEEGQKLFSSMIN 479
+L A S G V +K+FS +
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 480 EHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPF---APNVIIWGSLMSA 528
+ + + M+ Y + +A+ L++ M P+VI W +L+S
Sbjct: 181 QDLVV-----FNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISG 227
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/564 (29%), Positives = 287/564 (50%), Gaps = 45/564 (7%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPT-PQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKAS 131
VF ++ D N LL LS+ T + +++ + R G +
Sbjct: 231 VFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHET 290
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
L L +IHGL K G+ S + L++ YS C + + VF +MS R+ V+W MI
Sbjct: 291 DLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI- 349
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
S N D + ++ M+ P+ V +++A + + G IH + G
Sbjct: 350 ----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVS 405
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ ++ + +Y AK ++DA+ F+ I
Sbjct: 406 EPSVGNSFITLY-------------------------------AKFEALEDAKKAFEDIT 434
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVG--ALAQA 369
++++ W+AMISG+A++ EALK+F + P++ T S ++A A ++ Q
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQG 493
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
+ H + K G V++AL+DMYAK GN+ +++VF M +KN W+S+I+A++ H
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 553
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
G + MNLFH+M +E++ P+ V F+ VL AC+ G+V++G ++F+ MI + + P HEH
Sbjct: 554 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH 613
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
Y CMVD+ RA L++A EL+ +P P + S++ +C++HG V++G A+ +E++
Sbjct: 614 YSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMK 673
Query: 550 PDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINN-----EVHVFMM 604
P+ G+ V + NIYA++ W+ IR++M K +SKE S +++ + + F
Sbjct: 674 PELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSS 733
Query: 605 ADRYHKQSREIYKKLEEVVSELKL 628
D+ H +S EIY+ +E + E+ L
Sbjct: 734 GDKSHPKSDEIYRMVEIIGLEMNL 757
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 211/467 (45%), Gaps = 45/467 (9%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F + +PD N +L S Q L +++ G +
Sbjct: 133 IFENLVDPDVVSWNTIL---SGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEG 189
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
LGL++ K G SD + I MYS AR VFD+MS +D ++WN ++ G
Sbjct: 190 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 249
Query: 193 YCQSGNYD-QVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
Q G + + + ++ +M + D V +V++ C H +L + IH + G
Sbjct: 250 LSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRG--- 306
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
Y+ L L V ++S Y+K G+++ + +F Q+
Sbjct: 307 ------------------------YESL----LEVGNILMSRYSKCGVLEAVKSVFHQMS 338
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
E+++V W+ MIS +A+ +F M+ + P+++T + I+A + +
Sbjct: 339 ERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLK 393
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
IH K GF SV N+ I +YAK L AK+ FE++ + +ISW++MI+ FA +G+
Sbjct: 394 IHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGF 453
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAG--LVEEGQKLFSSMINEHGIAPRHEH 489
++ A+ +F E + PN F VL A + A V++GQ+ + ++ + G+
Sbjct: 454 SHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLL-KLGLNSCPVV 511
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
++D+Y + + ++ ++ M N +W S++SA HG+ E
Sbjct: 512 SSALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFE 557
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 179/399 (44%), Gaps = 42/399 (10%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G +IHG ++ GF S + ++ MY R +A +F+ + D V+WN ++ G+
Sbjct: 95 GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF-- 152
Query: 196 SGNYDQV-LKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
+ +Q+ L MK++ D T LS C S G + ++ GL
Sbjct: 153 --DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLV 210
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
+ ++ + MY G+ AR ++D++S K ++ ++LSG ++ G F F+ +V
Sbjct: 211 VGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT-----FGFEAVV--- 262
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
+F +M + D ++ S I+ C + L AR IH
Sbjct: 263 ----------------------IFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHG 300
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
K G+ L V N L+ Y+KCG L K VF M +NV+SW++MI++ +
Sbjct: 301 LCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDD 355
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV 494
A+++F M+ + + PN V F+G++ A ++EG K+ I + G +
Sbjct: 356 AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCI-KTGFVSEPSVGNSFI 414
Query: 495 DLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
LY + L A + E + F +I W +++S +G
Sbjct: 415 TLYAKFEALEDAKKAFEDITF-REIISWNAMISGFAQNG 452
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 155/363 (42%), Gaps = 43/363 (11%)
Query: 171 ARLVFDKMSHRDAVT-WNIMIDGYCQSGNYDQVLKLYEE---MKTSDTKPDGVILCTVLS 226
A +FD S R+A T N I + + + L +++E + D V LC L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 227 ACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVV 286
AC G+L G IH F +G + + V
Sbjct: 87 AC--RGDLKRGCQIHGFSTTSGF-------------------------------TSFVCV 113
Query: 287 STAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI 346
S A++ Y K G +A IF+ +V+ D+V W+ ++SG+ D Q AL M+ +
Sbjct: 114 SNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGV 170
Query: 347 VPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKE 406
V D T +A+S C + + K G L V N+ I MY++ G+ A+
Sbjct: 171 VFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARR 230
Query: 407 VFENMPRKNVISWSSMINAFAMHG-YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAG 465
VF+ M K++ISW+S+++ + G + A+ +F M E +E + V F V+ C H
Sbjct: 231 VFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHET 290
Query: 466 LVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSL 525
++ +++ I + G E ++ Y + +L + M NV+ W ++
Sbjct: 291 DLKLARQIHGLCI-KRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMS-ERNVVSWTTM 348
Query: 526 MSA 528
+S+
Sbjct: 349 ISS 351
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 14/217 (6%)
Query: 322 ISGYAESDQPQEALKLFNE-MQL----RNIVPDQITMLSAISACANVGALAQARWIHTYA 376
IS + P AL +F E +QL R++ D++T+ A+ AC G L + IH ++
Sbjct: 47 ISESLRRNSPARALSIFKENLQLGYFGRHM--DEVTLCLALKACR--GDLKRGCQIHGFS 102
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAM 436
+GF + V+NA++ MY K G A +FEN+ +V+SW+++++ F + A+
Sbjct: 103 TTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIAL 159
Query: 437 NLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDL 496
N RMK + + + L C + G +L S+++ + G+ + +
Sbjct: 160 NFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV-KTGLESDLVVGNSFITM 218
Query: 497 YCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
Y R+ R A + + M F ++I W SL+S G
Sbjct: 219 YSRSGSFRGARRVFDEMSF-KDMISWNSLLSGLSQEG 254
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 257/459 (55%), Gaps = 9/459 (1%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G+++H LA K GF + ++ T L++MYS C + A +F+K+ H+ VT+N I G +
Sbjct: 148 GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 196 SGNYDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
+G + V ++ M K S +P+ V ++AC NL YG+ +H +M
Sbjct: 208 NGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETM 267
Query: 255 LQSALVNMYVNCGAMDLARELYDKL-SSKHLVVSTAMLSGYAKHGMVKDARFIFDQI--- 310
+ +AL++MY C A ++ +L +++L+ +++SG +G + A +F+++
Sbjct: 268 VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSE 327
Query: 311 -VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
++ D W+++ISG+++ + EA K F M +VP + S +SAC+++ L
Sbjct: 328 GLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNG 387
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM-PR-KNVISWSSMINAFA 427
+ IH + K R + V +LIDMY KCG A+ +F+ P+ K+ + W+ MI+ +
Sbjct: 388 KEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYG 447
Query: 428 MHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
HG SA+ +F ++EE +EP+ F VL ACSH G VE+G ++F M E+G P
Sbjct: 448 KHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPST 507
Query: 488 EHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILE 547
EH GCM+DL R+ LR+A E+I+ M + + SL+ +C+ H + LGE AA ++ E
Sbjct: 508 EHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAE 566
Query: 548 LEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISK 586
LEP++ V+LS+IYA RW DV IRQ + K + K
Sbjct: 567 LEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVK 605
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 5/190 (2%)
Query: 348 PDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEV 407
P++ T + +CA +G + Q R +H K GF + AL+ MY K + A +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 408 FENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLV 467
+ MP + + S ++ ++ +G+ A +F + N V VL C G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 468 EEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMS 527
E G +L + + G +V +Y R A + E +P +V+ + + +S
Sbjct: 146 EGGMQL-HCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK-SVVTYNAFIS 203
Query: 528 ACQVHGEVEL 537
+G + L
Sbjct: 204 GLMENGVMNL 213
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/469 (31%), Positives = 264/469 (56%), Gaps = 11/469 (2%)
Query: 168 IMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSA 227
I +A VFD++ D ++ +I + + + + + ++ + +P+ TV+ +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 228 CGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVS 287
S ++ GK +H + + GLA + + SA++N YV + AR +D ++V
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 288 TAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN-- 345
T ++SGY K ++A +F + E+ +V W+A+I G++++ + +EA+ F +M LR
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM-LREGV 221
Query: 346 IVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVN--NALIDMYAKCGNLIR 403
++P++ T AI+A +N+ + + IH A K G+ +V N+LI Y+KCGN+
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIK-FLGKRFNVFVWNSLISFYSKCGNMED 280
Query: 404 AKEVFENMP--RKNVISWSSMINAFAMHGYANSAMNLFHRM-KEEDIEPNGVIFIGVLYA 460
+ F + ++N++SW+SMI +A +G A+ +F +M K+ ++ PN V +GVL+A
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 461 CSHAGLVEEGQKLFSSMINEHGIAP--RHEHYGCMVDLYCRANLLRKAMELIESMPFAPN 518
C+HAGL++EG F+ +N++ EHY CMVD+ R+ ++A ELI+SMP P
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 519 VIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQS 578
+ W +L+ CQ+H L + AA +ILEL+P + V+LSN Y+ W +V LIR+
Sbjct: 401 IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRK 460
Query: 579 MANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELK 627
M G+ + S +E+ +++ VF+ AD+ ++ E+Y+ L V L+
Sbjct: 461 MKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLE 509
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 8/253 (3%)
Query: 299 MVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAIS 358
++++A +FD+I E D++ +A+I + + + EA + F + I P++ T + I
Sbjct: 42 LIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIG 101
Query: 359 ACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS 418
+ + + +H YA K G ++ V +A+++ Y K L A+ F++ NV+S
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 419 WSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI 478
+++I+ + A++LF M E + V + V+ S G EE F M+
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDML 217
Query: 479 NEHGIAPRHEHYGCMVDLYCRANLLRKAMEL----IESMPFAPNVIIWGSLMSACQVHGE 534
E + P + C + + I+ + NV +W SL+S G
Sbjct: 218 REGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGN 277
Query: 535 VELGEFAAKQILE 547
+E A ++ E
Sbjct: 278 MEDSLLAFNKLEE 290
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/401 (19%), Positives = 161/401 (40%), Gaps = 79/401 (19%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF +IP D ++ + +++L +G + + +
Sbjct: 49 VFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRD 108
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDK--------------- 177
+ LG ++H A K+G S+ F+ + ++ Y + DAR FD
Sbjct: 109 VKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISG 168
Query: 178 ----------------MSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEM-KTSDTKPDGVI 220
M R VTWN +I G+ Q+G ++ + + +M + P+
Sbjct: 169 YLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNEST 228
Query: 221 LCTVLSACGHSGNLSYGKAIH----EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELY 276
++A + + GK+IH +F+ G + + ++L++ Y CG M+ + +
Sbjct: 229 FPCAITAISNIASHGAGKSIHACAIKFL---GKRFNVFVWNSLISFYSKCGNMEDSLLAF 285
Query: 277 DKLSS--KHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEA 334
+KL +++V +M+ GYA +G ++A +F+++V+
Sbjct: 286 NKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDT-------------------- 325
Query: 335 LKLFNEMQLRNIVPDQITMLSAISACANVGALAQA-----RWIHTYADKNGFGRSLSVNN 389
N+ P+ +T+L + AC + G + + + ++ Y D N L
Sbjct: 326 ----------NLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLL--ELEHYA 373
Query: 390 ALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMINAFAMH 429
++DM ++ G A+E+ ++MP I W +++ +H
Sbjct: 374 CMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIH 414
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 126/267 (47%), Gaps = 24/267 (8%)
Query: 126 AVSKASALYLGLEIHGLASK-LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKM--SHRD 182
A+S ++ G IH A K LG + F+ LI+ YS C + D+ L F+K+ R+
Sbjct: 235 AISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRN 294
Query: 183 AVTWNIMIDGYCQSGNYDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYG---- 237
V+WN MI GY +G ++ + ++E+M K ++ +P+ V + VL AC H+G + G
Sbjct: 295 IVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYF 354
Query: 238 -KAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLS-SKHLVVSTAMLSGYA 295
KA++++ N L L + + +V+M G A EL + + A+L G
Sbjct: 355 NKAVNDYDDPNLLELEHY--ACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQ 412
Query: 296 KHGMVKDARFIFDQIVE---KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQIT 352
H + A+ +I+E +D+ + + + Y+ + Q + +M+ T
Sbjct: 413 IHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKE--------T 464
Query: 353 MLSAISACANVGALAQARWIHTYADKN 379
L + C+ + Q R + ADKN
Sbjct: 465 GLKRFTGCSWIEVRDQIR-VFVNADKN 490
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 263/492 (53%), Gaps = 31/492 (6%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMS-HRDAVTWNIMIDGYCQS 196
++H KLG + I +I+ Y+ C + DA+ VFD + +D ++WN MI G+ +
Sbjct: 224 QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Query: 197 GNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQ 256
+ +L+ +M+ + D +LSAC + +GK++H ++ GL
Sbjct: 284 ELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSAT 343
Query: 257 SALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV 316
+AL++MY+ G ++DA +F+ + KDL+
Sbjct: 344 NALISMYIQFPT-----------------------------GTMEDALSLFESLKSKDLI 374
Query: 317 CWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYA 376
W+++I+G+A+ ++A+K F+ ++ I D + + +C+++ L + IH A
Sbjct: 375 SWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALA 434
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMHGYANSA 435
K+GF + V ++LI MY+KCG + A++ F+ + K + ++W++MI +A HG +
Sbjct: 435 TKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVS 494
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
++LF +M ++++ + V F +L ACSH GL++EG +L + M + I PR EHY VD
Sbjct: 495 LDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVD 554
Query: 496 LYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGA 555
L RA L+ KA ELIESMP P+ ++ + + C+ GE+E+ A +LE+EP+
Sbjct: 555 LLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFT 614
Query: 556 LVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREI 615
V LS++Y+ ++W + +++ M +G+ K S +EI N+V F DR + ++I
Sbjct: 615 YVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDI 674
Query: 616 YKKLEEVVSELK 627
Y ++++ E++
Sbjct: 675 YMMIKDLTQEMQ 686
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 179/404 (44%), Gaps = 43/404 (10%)
Query: 140 HGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNY 199
H A K G SD ++ ++ Y + A ++FD+M RD+V+WN MI GY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSAL 259
+ L+ MK S + DG +L G+ +H ++ G + ++ S+L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 260 VNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWS 319
V+MY C ++ A E + ++S E + V W+
Sbjct: 143 VDMYAKCERVEDAFEAFKEIS-------------------------------EPNSVSWN 171
Query: 320 AMISGYAESDQPQEALKLFNEMQLRNIVP-DQITMLSAISACANVGALAQARWIHTYADK 378
A+I+G+ + + A L M+++ V D T ++ + + +H K
Sbjct: 172 ALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLK 231
Query: 379 NGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM-PRKNVISWSSMINAFAMHGYANSAMN 437
G +++ NA+I YA CG++ AK VF+ + K++ISW+SMI F+ H SA
Sbjct: 232 LGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFE 291
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQ---KLFSSMINEHGIAPRHEHYGCMV 494
LF +M+ +E + + G+L ACS EE Q K M+ + G+ ++
Sbjct: 292 LFIQMQRHWVETDIYTYTGLLSACSG----EEHQIFGKSLHGMVIKKGLEQVTSATNALI 347
Query: 495 DLYCR--ANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
+Y + + A+ L ES+ + ++I W S+++ G E
Sbjct: 348 SMYIQFPTGTMEDALSLFESLK-SKDLISWNSIITGFAQKGLSE 390
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 145/331 (43%), Gaps = 35/331 (10%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N ++ S+ ++ L+ +++R A S G +HG+ K
Sbjct: 274 NSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIK 333
Query: 146 LGFHSDPFIQTGLIAMY--SACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVL 203
G LI+MY + DA +F+ + +D ++WN +I G+ Q G + +
Sbjct: 334 KGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAV 393
Query: 204 KLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMY 263
K + +++S+ K D +L +C L G+ IH +G + + S+L+ MY
Sbjct: 394 KFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMY 453
Query: 264 VNCGAMDLARELYDKLSSKHLVVS-TAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMI 322
CG ++ AR+ + ++SSKH V+ AM+ GYA+HG+
Sbjct: 454 SKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGL----------------------- 490
Query: 323 SGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA-RWIHTYADKNGF 381
Q +L LF++M +N+ D +T + ++AC++ G + + ++
Sbjct: 491 --------GQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKI 542
Query: 382 GRSLSVNNALIDMYAKCGNLIRAKEVFENMP 412
+ A +D+ + G + +AKE+ E+MP
Sbjct: 543 QPRMEHYAAAVDLLGRAGLVNKAKELIESMP 573
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/470 (31%), Positives = 236/470 (50%), Gaps = 36/470 (7%)
Query: 166 RRIMDARLV--FDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCT 223
RR++ + + F + R + + G C +G + + L + +S + +
Sbjct: 57 RRMLAEKRIGRFQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAV 113
Query: 224 VLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKH 283
+L C + GK IH + G AL+ +L+ L+ +Y
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILY-------------------- 153
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL 343
A G ++ A +F + +DL+ W+AMISGY + QE L ++ +M+
Sbjct: 154 -----------ALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQ 202
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR 403
IVPDQ T S AC+ + L + H K ++ V++AL+DMY KC +
Sbjct: 203 NRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSD 262
Query: 404 AKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
VF+ + +NVI+W+S+I+ + HG + + F +MKEE PN V F+ VL AC+H
Sbjct: 263 GHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNH 322
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWG 523
GLV++G + F SM ++GI P +HY MVD RA L++A E + P + +WG
Sbjct: 323 GGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWG 382
Query: 524 SLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKG 583
SL+ AC++HG V+L E AA + LEL+P + G VV +N YA +R+ M N G
Sbjct: 383 SLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAG 442
Query: 584 ISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTP 633
+ K+ S++E+ EVH FM D H+ S +IYKK+ E+ S + Y P
Sbjct: 443 VKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYP 492
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 154/351 (43%), Gaps = 44/351 (12%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G IH +GF + +++ L+ +Y+ + A ++F + RD + WN MI GY Q
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQ 186
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
G + L +Y +M+ + PD +V AC L +GK H ++ + + +
Sbjct: 187 KGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIV 246
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
SALV+MY C + ++D+LS+++++ T+++SGY HG V
Sbjct: 247 DSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV--------------- 291
Query: 316 VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTY 375
E LK F +M+ P+ +T L ++AC N G L W H Y
Sbjct: 292 ----------------SEVLKCFEKMKEEGCRPNPVTFLVVLTAC-NHGGLVDKGWEHFY 334
Query: 376 ADKNGFGRSLSVNN--ALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMHGYA 432
+ K +G + A++D + G L A E P +++ W S++ A +HG
Sbjct: 335 SMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG-- 392
Query: 433 NSAMNLFHRMKEEDIEP----NGVIFIGVLYACSHAGLVEEGQKLFSSMIN 479
N + K +++P N V+F +C GL E K+ M N
Sbjct: 393 NVKLLELAATKFLELDPTNGGNYVVFANGYASC---GLREAASKVRRKMEN 440
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 107/256 (41%), Gaps = 5/256 (1%)
Query: 99 QNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGL 158
Q LF+Y +R+ +A S L G H + K S+ + + L
Sbjct: 191 QEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSAL 250
Query: 159 IAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDG 218
+ MY C D VFD++S R+ +TW +I GY G +VLK +E+MK +P+
Sbjct: 251 VDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNP 310
Query: 219 VILCTVLSACGHSGNLSYG-KAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYD 277
V VL+AC H G + G + + D G+ +A+V+ G + A E
Sbjct: 311 VTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVM 370
Query: 278 KLSSK-HLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV---CWSAMISGYAESDQPQE 333
K K H V ++L HG VK + +E D + +GYA +
Sbjct: 371 KSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREA 430
Query: 334 ALKLFNEMQLRNIVPD 349
A K+ +M+ + D
Sbjct: 431 ASKVRRKMENAGVKKD 446
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 231/428 (53%), Gaps = 38/428 (8%)
Query: 208 EMKTSDTKPDG-----VILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNM 262
E +S K DG L + + +CG + + G H + G +L S+LV +
Sbjct: 105 EDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVL 164
Query: 263 YVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMI 322
Y + G V++A +F+++ E+++V W+AMI
Sbjct: 165 YRDSGE-------------------------------VENAYKVFEEMPERNVVSWTAMI 193
Query: 323 SGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFG 382
SG+A+ + LKL+++M+ P+ T + +SAC GAL Q R +H G
Sbjct: 194 SGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLK 253
Query: 383 RSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFH-R 441
L ++N+LI MY KCG+L A +F+ K+V+SW+SMI +A HG A A+ LF
Sbjct: 254 SYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM 313
Query: 442 MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRAN 501
M + +P+ + ++GVL +C HAGLV+EG+K F+ ++ EHG+ P HY C+VDL R
Sbjct: 314 MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFN-LMAEHGLKPELNHYSCLVDLLGRFG 372
Query: 502 LLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSN 561
LL++A+ELIE+MP PN +IWGSL+ +C+VHG+V G AA++ L LEPD V L+N
Sbjct: 373 LLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLAN 432
Query: 562 IYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEE 621
+YA W + +R+ M +KG+ S +EINN V +F D + + EI L
Sbjct: 433 LYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHC 492
Query: 622 VVSELKLV 629
++ ++ +
Sbjct: 493 LIDHMEFL 500
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 149/296 (50%), Gaps = 31/296 (10%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G H LA K GF SD ++ + L+ +Y + +A VF++M R+ V+W MI G+ Q
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQ 198
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
D LKLY +M+ S + P+ +LSAC SG L G+++H + GL H+
Sbjct: 199 EWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHI 258
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
++L++MY CG + A ++D+ S+K +V +M++GYA+HG+ A +F+ ++
Sbjct: 259 SNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMM---- 314
Query: 316 VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTY 375
P+ K PD IT L +S+C + G + + R
Sbjct: 315 ---------------PKSGTK-----------PDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 376 ADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMHG 430
++G L+ + L+D+ + G L A E+ ENMP K N + W S++ + +HG
Sbjct: 349 MAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 2/230 (0%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++P + ++ ++ L LY K+R+ A + + A
Sbjct: 177 VFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGA 236
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L G +H +G S I LI+MY C + DA +FD+ S++D V+WN MI G
Sbjct: 237 LGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 193 YCQSGNYDQVLKLYE-EMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
Y Q G Q ++L+E M S TKPD + VLS+C H+G + G+ + ++GL
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSK-HLVVSTAMLSGYAKHGMV 300
+ S LV++ G + A EL + + K + V+ ++L HG V
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDV 406
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 157/506 (31%), Positives = 256/506 (50%), Gaps = 45/506 (8%)
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
LG +IH LA +LGF D + L+ +Y+ + + A L+F +M + V+WNIMI G+
Sbjct: 267 LGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFG 326
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI---------- 244
Q D+ ++ M+ S +P+ V +VL AC SG++ G+ I I
Sbjct: 327 QEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNA 386
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAML----SGYAKHGMV 300
M +G + H + A+ N M DK + ++ S A L G HG+V
Sbjct: 387 MLSGYSNYEHYEEAISNFR----QMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVV 442
Query: 301 -------------------------KDARFIFDQIV-EKDLVCWSAMISGYAESDQPQEA 334
+ + IFD + E D+ CW++MISG+ + +A
Sbjct: 443 IRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKA 502
Query: 335 LKLFNEM-QLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALID 393
L LF M Q + P++ + + +S+C+ + +L R H K+G+ V AL D
Sbjct: 503 LILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTD 562
Query: 394 MYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVI 453
MY KCG + A++ F+ + RKN + W+ MI+ + +G + A+ L+ +M +P+G+
Sbjct: 563 MYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGIT 622
Query: 454 FIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
F+ VL ACSH+GLVE G ++ SSM HGI P +HY C+VD RA L A +L E+
Sbjct: 623 FVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEAT 682
Query: 514 PFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVG 573
P+ + ++W L+S+C+VHG+V L A++++ L+P A V+LSN Y+ R+W+D
Sbjct: 683 PYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSA 742
Query: 574 LIRQSMANKGISKEKASSRVEINNEV 599
++ M + K S N++
Sbjct: 743 ALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/501 (22%), Positives = 219/501 (43%), Gaps = 49/501 (9%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF +P D N ++ +L R + L +Y+++ G A SK
Sbjct: 94 VFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLD 153
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARL-VFDKMSHRDAVTWNIMID 191
G+ HG+A K G + F+ L++MY+ C I+D + VF+ +S + V++ +I
Sbjct: 154 GVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIG 213
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLS------ACGHSGNL---SYGKAIHE 242
G + + ++++ M + D V L +LS C + GK IH
Sbjct: 214 GLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHC 273
Query: 243 FIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYA------- 295
+ G HL ++L+ +Y M+ A ++ ++ ++V M+ G+
Sbjct: 274 LALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDK 333
Query: 296 ----------------------------KHGMVKDARFIFDQIVEKDLVCWSAMISGYAE 327
+ G V+ R IF I + + W+AM+SGY+
Sbjct: 334 SVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSN 393
Query: 328 SDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSV 387
+ +EA+ F +MQ +N+ PD+ T+ +S+CA + L + IH + ++ +
Sbjct: 394 YEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHI 453
Query: 388 NNALIDMYAKCGNLIRAKEVFEN-MPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEED 446
+ LI +Y++C + ++ +F++ + ++ W+SMI+ F + A+ LF RM +
Sbjct: 454 VSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTA 513
Query: 447 IE-PNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRK 505
+ PN F VL +CS + G++ F ++ + G + D+YC+ +
Sbjct: 514 VLCPNETSFATVLSSCSRLCSLLHGRQ-FHGLVVKSGYVSDSFVETALTDMYCKCGEIDS 572
Query: 506 AMELIESMPFAPNVIIWGSLM 526
A + +++ N +IW ++
Sbjct: 573 ARQFFDAV-LRKNTVIWNEMI 592
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 196/449 (43%), Gaps = 80/449 (17%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSAC------RRIMD------------------- 170
G IHG ++G SD ++ L+ +Y C R++ D
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 171 ------ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTV 224
A VFD M RD V+WN MI + G ++ L +Y+ M P L +V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 225 LSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCG-AMDLARELYDKLSSKH 283
LSAC + +G H + GL + + +AL++MY CG +D +++ LS +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 284 LVVSTAMLSGYAKHGMVKDA----RFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFN 339
V TA++ G A+ V +A R + ++ V+ D VC S ++S A P+E +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA----PREGCDSLS 260
Query: 340 EMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCG 399
E+ + + IH A + GFG L +NN+L+++YAK
Sbjct: 261 EIYGNEL----------------------GKQIHCLALRLGFGGDLHLNNSLLEIYAKNK 298
Query: 400 NLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLY 459
++ A+ +F MP NV+SW+ MI F ++ ++ RM++ +PN V I VL
Sbjct: 299 DMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG 358
Query: 460 ACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPF---A 516
AC +G VE G+++FSS+ P + M+ Y +A+ M F
Sbjct: 359 ACFRSGDVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLK 413
Query: 517 PNVIIWGSLMSAC----------QVHGEV 535
P+ ++S+C Q+HG V
Sbjct: 414 PDKTTLSVILSSCARLRFLEGGKQIHGVV 442
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 2/191 (1%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVT 185
+ S+ +L G + HGL K G+ SD F++T L MY C I AR FD + ++ V
Sbjct: 528 SCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVI 587
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
WN MI GY +G D+ + LY +M +S KPDG+ +VL+AC HSG + G I +
Sbjct: 588 WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQ 647
Query: 246 D-NGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK-HLVVSTAMLSGYAKHGMVKDA 303
+G+ +V+ G ++ A +L + K V+ +LS HG V A
Sbjct: 648 RIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLA 707
Query: 304 RFIFDQIVEKD 314
R + ++++ D
Sbjct: 708 RRVAEKLMRLD 718
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 161/556 (28%), Positives = 269/556 (48%), Gaps = 55/556 (9%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D TW MI G +G Q L ++ +M + P+ V + + +SAC ++ G +H
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK------------------- 282
+ G + ++LV+MY CG ++ AR+++D + +K
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 283 ----------------HLVVSTAMLSGYAKHGMVKDARFIF-----DQIVEKDLVCWSAM 321
+++ M+SGY K+G +A +F D V+++ W+ +
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 322 ISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGF 381
I+GY ++ + EAL+LF +MQ +P+ +T+LS + ACAN+ R IH +
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNL 555
Query: 382 GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHR 441
+V NAL D YAK G++ ++ +F M K++I+W+S+I + +HG A+ LF++
Sbjct: 556 DAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQ 615
Query: 442 MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRAN 501
MK + I PN ++ A G V+EG+K+F S+ N++ I P EH MV LY RAN
Sbjct: 616 MKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRAN 675
Query: 502 LLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSN 561
L +A++ I+ M IW S ++ C++HG++++ AA+ + LEP++ ++S
Sbjct: 676 RLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQ 735
Query: 562 IYAKERRWNDVGLIRQSMANKG-----ISKEKASSRVEINNEVHVFMMADRYHKQSREIY 616
IYA + L R NK + K S +E+ N +H F D QS+
Sbjct: 736 IYALGAK-----LGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGD----QSKLCT 786
Query: 617 KKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKR-RKESCIR 675
L +V ++ + HSEK A+ +GLIS ++ IR
Sbjct: 787 DVLYPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIHSEKFAMAFGLISSSGASKTTIR 846
Query: 676 IVKNLRICEDCHSFMK 691
I+KNLR+C DCH K
Sbjct: 847 ILKNLRMCRDCHDTAK 862
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 221/444 (49%), Gaps = 47/444 (10%)
Query: 130 ASALYLGLEIHGLASKLGFHSDP--FIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWN 187
+ +++LG +H ++ G ++P F++T L++MY+ C I DAR VFD M R+ TW+
Sbjct: 94 SGSIHLGRILH---ARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWS 150
Query: 188 IMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN 247
MI Y + + +V KL+ M PD + +L C + G++ GK IH ++
Sbjct: 151 AMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKL 210
Query: 248 GLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIF 307
G++ + ++++ +Y CG +D A + + ++ + ++ ++L Y ++G ++A +
Sbjct: 211 GMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELV 270
Query: 308 DQI---------------------------------------VEKDLVCWSAMISGYAES 328
++ + D+ W+AMISG +
Sbjct: 271 KEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHN 330
Query: 329 DQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVN 388
+AL +F +M L +VP+ +T++SA+SAC+ + + Q +H+ A K GF + V
Sbjct: 331 GMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVG 390
Query: 389 NALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIE 448
N+L+DMY+KCG L A++VF+++ K+V +W+SMI + GY A LF RM++ ++
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 449 PNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAME 508
PN + + ++ G E LF M + + + ++ Y + +A+E
Sbjct: 451 PNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALE 510
Query: 509 LIESMPFA---PNVIIWGSLMSAC 529
L M F+ PN + SL+ AC
Sbjct: 511 LFRKMQFSRFMPNSVTILSLLPAC 534
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 137/277 (49%), Gaps = 7/277 (2%)
Query: 259 LVNMYVNCGAMDLARELYDKL---SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
L+ ++ G++ L R L+ + + + V T +LS YAK G + DAR +FD + E++L
Sbjct: 87 LLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL 146
Query: 316 VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTY 375
WSAMI Y+ ++ +E KLF M ++PD + CAN G + + IH+
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSV 206
Query: 376 ADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSA 435
K G L V+N+++ +YAKCG L A + F M ++VI+W+S++ A+ +G A
Sbjct: 207 VIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEA 266
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
+ L M++E I P V + ++ + G + L M GI + M+
Sbjct: 267 VELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMIS 325
Query: 496 LYCRANLLRKAMELIESMPFA---PNVIIWGSLMSAC 529
+ +A+++ M A PN + S +SAC
Sbjct: 326 GLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 168/365 (46%), Gaps = 53/365 (14%)
Query: 126 AVSKASALYL---GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRD 182
AVS S L + G E+H +A K+GF D + L+ MYS C ++ DAR VFD + ++D
Sbjct: 358 AVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD 417
Query: 183 AVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE 242
TWN MI GYCQ+G + +L+ M+ ++ +P+ + T++S G+ N G+A+
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS--GYIKNGDEGEAMDL 475
Query: 243 FIM---DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLV-------------- 285
F D + + + ++ Y+ G D A EL+ K+ +
Sbjct: 476 FQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACA 535
Query: 286 -------------------------VSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSA 320
V A+ YAK G ++ +R IF + KD++ W++
Sbjct: 536 NLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNS 595
Query: 321 MISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI-HTYADKN 379
+I GY AL LFN+M+ + I P++ T+ S I A +G + + + + ++ A+
Sbjct: 596 LIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDY 655
Query: 380 GFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMHGYANSAM-- 436
+L +A++ +Y + L A + + M + W S + +HG + A+
Sbjct: 656 HIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHA 715
Query: 437 --NLF 439
NLF
Sbjct: 716 AENLF 720
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/447 (33%), Positives = 239/447 (53%), Gaps = 40/447 (8%)
Query: 153 FIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTS 212
+ T L+ MY A VFD+M ++ V+W MI G + NY+ + L+ M+
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 213 DTKPDGVILCTVLSACGHSGNLSYG----KAIHEFIMDNGLALSAHLQSALVNMYVNCGA 268
+ +P+ V L +VL AC L+YG K IH F +G L +A + MY CG
Sbjct: 246 NLRPNRVTLLSVLPACV---ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGN 302
Query: 269 MDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAES 328
+ L+ R +F+ +D+V WS+MISGYAE+
Sbjct: 303 VSLS-------------------------------RVLFETSKVRDVVMWSSMISGYAET 331
Query: 329 DQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVN 388
E + L N+M+ I + +T+L+ +SAC N L+ A +H+ K GF + +
Sbjct: 332 GDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLG 391
Query: 389 NALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIE 448
NALIDMYAKCG+L A+EVF + K+++SWSSMINA+ +HG+ + A+ +F M + E
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHE 451
Query: 449 PNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAME 508
+ + F+ +L AC+HAGLVEE Q +F+ H + EHY C ++L R + A E
Sbjct: 452 VDDMAFLAILSACNHAGLVEEAQTIFTQAGKYH-MPVTLEHYACYINLLGRFGKIDDAFE 510
Query: 509 LIESMPFAPNVIIWGSLMSACQVHGEVEL-GEFAAKQILELEPDHDGALVVLSNIYAKER 567
+ +MP P+ IW SL+SAC+ HG +++ G+ A ++++ EPD+ V+LS I+ +
Sbjct: 511 VTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESG 570
Query: 568 RWNDVGLIRQSMANKGISKEKASSRVE 594
++ +R+ M + ++K S++E
Sbjct: 571 NYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 198/403 (49%), Gaps = 38/403 (9%)
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
LG ++H L K G D + LI+MY+ R R VFD+M HRD V++ +I+ C
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC 124
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLS-YGKAIHEFIM-DNGLALS 252
Q G + +KL +EM P ++ ++L+ C G+ S + H ++ D + S
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQES 184
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
L +ALV+MY+ A ++D++ K+ V
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEV--------------------------- 217
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACA--NVGALAQAR 370
W+AMISG + + + LF MQ N+ P+++T+LS + AC N G+ + +
Sbjct: 218 ----SWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGS-SLVK 272
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
IH ++ ++G + A + MY +CGN+ ++ +FE ++V+ WSSMI+ +A G
Sbjct: 273 EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETG 332
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY 490
+ MNL ++M++E IE N V + ++ AC+++ L+ + S ++ + G
Sbjct: 333 DCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQIL-KCGFMSHILLG 391
Query: 491 GCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
++D+Y + L A E+ + +++ W S+++A +HG
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLHG 433
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 153/326 (46%), Gaps = 34/326 (10%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
EIHG + + G H+D + + MY C + +R++F+ RD V W+ MI GY ++G
Sbjct: 273 EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETG 332
Query: 198 NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
+ +V+ L +M+ + + V L ++SAC +S LS+ +H I+ G L +
Sbjct: 333 DCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGN 392
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC 317
AL++MY CG++ ARE++ +L+ K LV ++M++ Y HG
Sbjct: 393 ALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHG------------------- 433
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
EAL++F M D + L+ +SAC + G + +A+ I T A
Sbjct: 434 ------------HGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAG 481
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMHGYANSAM 436
K +L I++ + G + A EV NMP K + WSS+++A HG + A
Sbjct: 482 KYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAG 541
Query: 437 NLFHR--MKEEDIEPNGVIFIGVLYA 460
+ MK E P + + ++
Sbjct: 542 KIIANELMKSEPDNPANYVLLSKIHT 567
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 1/196 (0%)
Query: 104 LYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYS 163
L ++R+ G A + ++ L +H K GF S + LI MY+
Sbjct: 340 LLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYA 399
Query: 164 ACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCT 223
C + AR VF +++ +D V+W+ MI+ Y G+ + L++++ M + D +
Sbjct: 400 KCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLA 459
Query: 224 VLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKH 283
+LSAC H+G + + I + ++ + +N+ G +D A E+ + K
Sbjct: 460 ILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKP 519
Query: 284 LV-VSTAMLSGYAKHG 298
+ +++LS HG
Sbjct: 520 SARIWSSLLSACETHG 535
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 178/692 (25%), Positives = 307/692 (44%), Gaps = 64/692 (9%)
Query: 35 QIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLRLLSR 94
QIH I++S N +F +IP D N ++ L +
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 95 SPTPQNTLFLYQKLRRV-GXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPF 153
L+ ++ RV G + + +S L G E+HG A ++G +
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 154 IQTGLIAMYSACRRIMDARLVFDKMSHRDAVT---------------------------- 185
+ LI YS + +++ M +DAVT
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN 381
Query: 186 ---WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE 242
+N ++ G+C++G+ + LKL+ +M + L + + ACG + IH
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHG 441
Query: 243 FIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKD 302
F + G A + +Q+AL++M C M A E++D+ S +L S A
Sbjct: 442 FCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPS-NLDSSKAT------------ 488
Query: 303 ARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNE-MQLRNIVPDQITMLSAISACA 361
+++I GYA + P +A+ LF+ + + + D++++ ++ C
Sbjct: 489 ----------------TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCG 532
Query: 362 NVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSS 421
+G IH YA K G+ +S+ N+LI MYAKC + A ++F M +VISW+S
Sbjct: 533 TLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNS 592
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYAC--SHAGLVEEGQKLFSSMIN 479
+I+ + + + A+ L+ RM E++I+P+ + V+ A + + + + LF SM
Sbjct: 593 LISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKT 652
Query: 480 EHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGE 539
+ I P EHY V + LL +A + I SMP P V + +L+ +C++H + +
Sbjct: 653 IYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAK 712
Query: 540 FAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEV 599
AK IL +P+ ++ SNIY+ W+ +IR+ M +G K A S + N++
Sbjct: 713 RVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKI 772
Query: 600 HVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLA 659
H F D H Q ++IY+ LE ++ E V Y P+T HS KLA
Sbjct: 773 HSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLA 832
Query: 660 LCYGLISKRRKESCIRIVKNLRICEDCHSFMK 691
+ YG++S + +R++KN+ +C DCH F K
Sbjct: 833 VTYGILSSNTRGKPVRVMKNVMLCGDCHEFFK 864
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/506 (25%), Positives = 233/506 (46%), Gaps = 29/506 (5%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXX-XXXXXXXXXKAVSKAS 131
VF + +P L+ SR L ++ ++R+ G A + S
Sbjct: 136 VFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVS 195
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMY-----SACRRIMDARLVFDKMSHRDAVTW 186
LG++IHGL K GF + F+ L+++Y S+C ++ +FD++ RD +W
Sbjct: 196 RFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLK---LFDEIPQRDVASW 252
Query: 187 NIMIDGYCQSGNYDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
N ++ + G + L+ EM + D L T+LS+C S L G+ +H +
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAI 312
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
GL + +AL+ Y M LY+ + ++ V T M++ Y GMV A
Sbjct: 313 RIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVE 372
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA 365
IF + EK+ + ++A+++G+ + +ALKLF +M R + ++ SA+ AC V
Sbjct: 373 IFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSE 432
Query: 366 LAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK--NVISWSSMI 423
+ IH + K G + + AL+DM +C + A+E+F+ P + + +S+I
Sbjct: 433 KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSII 492
Query: 424 NAFAMHGYANSAMNLFHR-MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHG 482
+A +G + A++LFHR + E+ + + V +L C G E G ++ H
Sbjct: 493 GGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQI-------HC 545
Query: 483 IAPRHEHYG------CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA--CQVHGE 534
A + ++ ++ +Y + A+++ +M +VI W SL+S Q +G+
Sbjct: 546 YALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMR-EHDVISWNSLISCYILQRNGD 604
Query: 535 VELGEFAAKQILELEPDHDGALVVLS 560
L ++ E++PD +V+S
Sbjct: 605 EALALWSRMNEKEIKPDIITLTLVIS 630
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 138/266 (51%), Gaps = 12/266 (4%)
Query: 278 KLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKL 337
KL + + A++S Y K G ++A +F + +V ++A+ISG++ + EALK+
Sbjct: 108 KLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKV 167
Query: 338 FNEMQLRNIV-PDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYA 396
F M+ +V P++ T ++ ++AC V + IH K+GF S+ V+N+L+ +Y
Sbjct: 168 FFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYD 227
Query: 397 K-----CGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRM-KEEDIEPN 450
K C ++++ +F+ +P+++V SW++++++ G ++ A +LF+ M + E +
Sbjct: 228 KDSGSSCDDVLK---LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVD 284
Query: 451 GVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELI 510
+L +C+ + ++ G++L I G+ ++ Y + ++K L
Sbjct: 285 SFTLSTLLSSCTDSSVLLRGRELHGRAI-RIGLMQELSVNNALIGFYSKFWDMKKVESLY 343
Query: 511 ESMPFAPNVIIWGSLMSACQVHGEVE 536
E M A + + + +++A G V+
Sbjct: 344 EMM-MAQDAVTFTEMITAYMSFGMVD 368
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/473 (31%), Positives = 251/473 (53%), Gaps = 39/473 (8%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
KA S+ + LG HG+ GF + FI + L +Y R +DAR VFD+M D +
Sbjct: 171 KACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVI 230
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEF 243
W ++ + ++ Y++ L L+ M + PDG TVL+ACG+ L GK IH
Sbjct: 231 CWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGK 290
Query: 244 IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDA 303
++ NG+ + ++S+L++M Y K G V++A
Sbjct: 291 LITNGIGSNVVVESSLLDM-------------------------------YGKCGSVREA 319
Query: 304 RFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV 363
R +F+ + +K+ V WSA++ GY ++ + ++A+++F EM+ + D + + ACA +
Sbjct: 320 RQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGL 375
Query: 364 GALAQARWIH-TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSM 422
A+ + IH Y + FG + V +ALID+Y K G + A V+ M +N+I+W++M
Sbjct: 376 AAVRLGKEIHGQYVRRGCFGNVI-VESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAM 434
Query: 423 INAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHG 482
++A A +G A++ F+ M ++ I+P+ + FI +L AC H G+V+EG+ F M +G
Sbjct: 435 LSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYG 494
Query: 483 IAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEV-ELGEFA 541
I P EHY CM+DL RA L +A L+E + +WG L+ C + + + E
Sbjct: 495 IKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERI 554
Query: 542 AKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVE 594
AK+++ELEP + + V+LSN+Y R D IR+ M +G++K S ++
Sbjct: 555 AKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 195/410 (47%), Gaps = 53/410 (12%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIM-DARLVFDKMSHRDAVTWNIMIDGYC 194
G++ H K G +D + L+++Y M + R VFD +DA++W M+ GY
Sbjct: 80 GIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYV 139
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
+ + L+++ EM + + L + + AC G + G+ H ++ +G +
Sbjct: 140 TGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHF 199
Query: 255 LQSALVNMY-VNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
+ S L +Y VN +D AR ++D++ ++ TA+LS ++K+
Sbjct: 200 ISSTLAYLYGVNREPVD-ARRVFDEMPEPDVICWTAVLSAFSKN---------------- 242
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEM-QLRNIVPDQITMLSAISACANVGALAQARWI 372
D +EAL LF M + + +VPD T + ++AC N+ L Q + I
Sbjct: 243 ---------------DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEI 287
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H NG G ++ V ++L+DMY KCG++ A++VF M +KN +SWS+++ + +G
Sbjct: 288 HGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEH 347
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG- 491
A+ +F M+E+D+ F VL AC+ V G+++ HG R +G
Sbjct: 348 EKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEI-------HGQYVRRGCFGN 396
Query: 492 -----CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
++DLY ++ + A + M N+I W +++SA +G E
Sbjct: 397 VIVESALIDLYGKSGCIDSASRVYSKMSI-RNMITWNAMLSALAQNGRGE 445
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 174/381 (45%), Gaps = 41/381 (10%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRR-VGXXXXXXXXXXXXKAVSKAS 131
VF ++P PD +L S++ + L L+ + R G A
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
L G EIHG G S+ +++ L+ MY C + +AR VF+ MS +++V+W+ ++
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLG 339
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
GYCQ+G +++ ++++ EM+ D G TVL AC + GK IH + G
Sbjct: 340 GYCQNGEHEKAIEIFREMEEKDLYCFG----TVLKACAGLAAVRLGKEIHGQYVRRGCFG 395
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ ++SAL+++Y G +D A +Y K+S ++++ AMLS A++G
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNG------------- 442
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR- 370
+ +EA+ FN+M + I PD I+ ++ ++AC + G + + R
Sbjct: 443 ------------------RGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRN 484
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMINAFAMH 429
+ A G + +ID+ + G A+ + E +N S W ++ A +
Sbjct: 485 YFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAAN 544
Query: 430 GYANS-AMNLFHRMKEEDIEP 449
A+ A + RM E +EP
Sbjct: 545 ADASRVAERIAKRMME--LEP 563
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 162/344 (47%), Gaps = 33/344 (9%)
Query: 194 CQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
C+ G + +++ +S+ + ++L C + +G H ++ +GL
Sbjct: 37 CKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDR 96
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
++ ++L+++Y G GM ++ R +FD K
Sbjct: 97 NVGNSLLSLYFKLGP-----------------------------GM-RETRRVFDGRFVK 126
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
D + W++M+SGY + +AL++F EM + ++ T+ SA+ AC+ +G + R H
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 374 TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYAN 433
+GF + +++ L +Y + A+ VF+ MP +VI W+++++AF+ +
Sbjct: 187 GVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYE 246
Query: 434 SAMNLFHRM-KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
A+ LF+ M + + + P+G F VL AC + +++G+++ +I +GI
Sbjct: 247 EALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLIT-NGIGSNVVVESS 305
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
++D+Y + +R+A ++ M N + W +L+ +GE E
Sbjct: 306 LLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHE 348
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 259 bits (662), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 254/515 (49%), Gaps = 35/515 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F +I D ++ SR + L L++++ R K+
Sbjct: 69 LFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGC 128
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L G++IHG K + +++ L+++Y+ C ++ +ARL FD M RD V+WN MIDG
Sbjct: 129 LKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDG 188
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y + D L++ M T KPD ++L A L +H + G S
Sbjct: 189 YTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRS 248
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ L +LVN YV CG++ A +L++ +
Sbjct: 249 SALIRSLVNAYVKCGSLANAWKLHEGTK-------------------------------K 277
Query: 313 KDLVCWSAMISGYAESDQ-PQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
+DL+ +A+I+G+++ + +A +F +M D++ + S + C + ++ R
Sbjct: 278 RDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQ 337
Query: 372 IHTYADKNGFGR-SLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
IH +A K+ R +++ N+LIDMYAK G + A FE M K+V SW+S+I + HG
Sbjct: 338 IHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHG 397
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY 490
A++L++RM+ E I+PN V F+ +L ACSH G E G K++ +MIN+HGI R EH
Sbjct: 398 NFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHL 457
Query: 491 GCMVDLYCRANLLRKAMELIESMP--FAPNVIIWGSLMSACQVHGEVELGEFAAKQILEL 548
C++D+ R+ L +A LI S + + WG+ + AC+ HG V+L + AA Q+L +
Sbjct: 458 SCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSM 517
Query: 549 EPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKG 583
EP + L+++YA W++ R+ M G
Sbjct: 518 EPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 552
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 183/401 (45%), Gaps = 33/401 (8%)
Query: 137 LEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQS 196
L IHG + GF S+ ++ LI +Y + AR +FD++S RD V+W MI + +
Sbjct: 32 LLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRC 91
Query: 197 GNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQ 256
G + L L++EM D K + +VL +C G L G IH +
Sbjct: 92 GYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKG--------- 142
Query: 257 SALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV 316
NC +L+V +A+LS YA+ G +++AR FD + E+DLV
Sbjct: 143 --------NCAG--------------NLIVRSALLSLYARCGKMEEARLQFDSMKERDLV 180
Query: 317 CWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYA 376
W+AMI GY + + LF M PD T S + A V L +H A
Sbjct: 181 SWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLA 240
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS-A 435
K GFGRS ++ +L++ Y KCG+L A ++ E +++++S +++I F+ S A
Sbjct: 241 IKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDA 300
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
++F M + + V+ +L C+ V G+++ + I ++D
Sbjct: 301 FDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLID 360
Query: 496 LYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
+Y ++ + A+ E M +V W SL++ HG E
Sbjct: 361 MYAKSGEIEDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNFE 400
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 5/180 (2%)
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
L A+ C+ Q IH + NGF +L + + LID+Y K G++ A+++F+ + +
Sbjct: 16 LKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISK 75
Query: 414 KNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKL 473
++V+SW++MI+ F+ GY A+ LF M ED++ N + VL +C G ++EG ++
Sbjct: 76 RDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQI 135
Query: 474 FSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP----FAPNVIIWGSLMSAC 529
S + + A ++ LY R + +A +SM + N +I G +AC
Sbjct: 136 HGS-VEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 194
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 225/415 (54%), Gaps = 44/415 (10%)
Query: 180 HRDAVTWNIMIDGYCQSGN-YDQVLKLYEEMKTSDTKPDG--VILCTVLSACGHSGNLSY 236
H ++ N + Y +SG +L + S + D V+ +S+ + +L
Sbjct: 25 HTKSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD- 83
Query: 237 GKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAK 296
G+ IH + G +Q++LV Y + G +D AR+
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQ---------------------- 121
Query: 297 HGMVKDARFIFDQIVEK-DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLS 355
+FD+ EK ++V W+AMIS Y E++ EA++LF M+ I D + +
Sbjct: 122 ---------VFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTV 172
Query: 356 AISACANVGALAQARWIHTYA--DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
A+SACA++GA+ I++ + K L++ N+L++MY K G +A+++F+ R
Sbjct: 173 ALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMR 232
Query: 414 KNVISWSSMINAFAMHGYANSAMNLFHRMKEED------IEPNGVIFIGVLYACSHAGLV 467
K+V +++SMI +A++G A ++ LF +MK D I PN V FIGVL ACSH+GLV
Sbjct: 233 KDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLV 292
Query: 468 EEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMS 527
EEG++ F SMI ++ + PR H+GCMVDL+CR+ L+ A E I MP PN +IW +L+
Sbjct: 293 EEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLG 352
Query: 528 ACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANK 582
AC +HG VELGE ++I EL+ DH G V LSNIYA + W++ +R + +
Sbjct: 353 ACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKR 407
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 174/361 (48%), Gaps = 48/361 (13%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR-DAV 184
+ KAS+L G +IH L KLGF++ IQT L+ YS+ + AR VFD+ + + V
Sbjct: 75 SAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIV 133
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
W MI Y ++ N + ++L++ M+ + DGVI+ LSAC G + G+ I+
Sbjct: 134 LWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRS 193
Query: 245 MDNG--LALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKD 302
+ LA+ L+++L+NMYV G + AR+L+D+ K + T+M+ GYA +G
Sbjct: 194 IKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNG---- 249
Query: 303 ARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN------IVPDQITMLSA 356
Q QE+L+LF +M+ + I P+ +T +
Sbjct: 250 ---------------------------QAQESLELFKKMKTIDQSQDTVITPNDVTFIGV 282
Query: 357 ISACANVGALAQAR--WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK 414
+ AC++ G + + + + D N R ++D++ + G+L A E MP K
Sbjct: 283 LMACSHSGLVEEGKRHFKSMIMDYNLKPREAHF-GCMVDLFCRSGHLKDAHEFINQMPIK 341
Query: 415 -NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNG-VIFIGVLYACSHAGLVEEGQK 472
N + W +++ A ++HG + R+ E D + G + + +YA G+ +E K
Sbjct: 342 PNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASK--GMWDEKSK 399
Query: 473 L 473
+
Sbjct: 400 M 400
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/504 (30%), Positives = 254/504 (50%), Gaps = 43/504 (8%)
Query: 137 LEIHGLASKLGFHSDPFIQTGLIAM--YSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
L+IHG +D FI + L+ + S + + AR + S TWN++ GY
Sbjct: 30 LQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYS 89
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
S + + + +Y EMK KP+ + +L AC L+ G+ I ++ +G +
Sbjct: 90 SSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVY 149
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
+ + L+++Y C AR+++D+++ E++
Sbjct: 150 VGNNLIHLYGTCKKTSDARKVFDEMT-------------------------------ERN 178
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
+V W+++++ E+ + + F EM + PD+ TM+ +SAC G L+ + +H+
Sbjct: 179 VVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHS 236
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
+ + AL+DMYAK G L A+ VFE M KNV +WS+MI A +G+A
Sbjct: 237 QVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEE 296
Query: 435 AMNLFHR-MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCM 493
A+ LF + MKE + PN V F+GVL ACSH GLV++G K F M H I P HYG M
Sbjct: 297 ALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAM 356
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE---LGEFAAKQILELEP 550
VD+ RA L +A + I+ MPF P+ ++W +L+SAC +H + + +GE K+++ELEP
Sbjct: 357 VDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEP 416
Query: 551 DHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHK 610
G LV+++N +A+ R W + +R+ M + K S +E+ H F
Sbjct: 417 KRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRS 476
Query: 611 QSREIYKKLE----EVVSELKLVS 630
+ IY+ L+ ++ + +LVS
Sbjct: 477 EYVSIYELLDLFKFQLTCDYRLVS 500
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 168/347 (48%), Gaps = 36/347 (10%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N L R S S +P ++++Y +++R G KA + L G +I K
Sbjct: 82 NMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLK 141
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL 205
GF D ++ LI +Y C++ DAR VFD+M+ R+ V+WN ++ ++G + V +
Sbjct: 142 HGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFEC 201
Query: 206 YEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVN 265
+ EM PD + +LSACG GNLS GK +H +M L L+ L +ALV+MY
Sbjct: 202 FCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAK 259
Query: 266 CGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGY 325
G ++ AR +++++ K++ +AM+ G A++G
Sbjct: 260 SGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGF-------------------------- 293
Query: 326 AESDQPQEALKLFNEMQLRNIV-PDQITMLSAISACANVGALAQA-RWIHTYADKNGFGR 383
+EAL+LF++M + V P+ +T L + AC++ G + ++ H +
Sbjct: 294 -----AEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKP 348
Query: 384 SLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMH 429
+ A++D+ + G L A + + MP + + W ++++A ++H
Sbjct: 349 MMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 245/463 (52%), Gaps = 41/463 (8%)
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
+G ++HGLA K G+ + + MYS+ A VF+ + +D VTWN MI Y
Sbjct: 306 MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYN 365
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
Q+ + +Y+ M KPD EF + LA S
Sbjct: 366 QAKLGKSAMSVYKRMHIIGVKPD------------------------EFTFGSLLATSLD 401
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
L ++ M C + LSSK + +S A++S Y+K+G ++ A +F++ + K+
Sbjct: 402 LD--VLEMVQAC-------IIKFGLSSK-IEISNALISAYSKNGQIEKADLLFERSLRKN 451
Query: 315 LVCWSAMISGYAESDQPQEALKLFN---EMQLRNIVPDQITMLSAISACANVGALAQARW 371
L+ W+A+ISG+ + P E L+ F+ E ++R I+PD T+ + +S C + +L
Sbjct: 452 LISWNAIISGFYHNGFPFEGLERFSCLLESEVR-ILPDAYTLSTLLSICVSTSSLMLGSQ 510
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
H Y ++G + + NALI+MY++CG + + EVF M K+V+SW+S+I+A++ HG
Sbjct: 511 THAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGE 570
Query: 432 ANSAMNLFHRMKEE-DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY 490
+A+N + M++E + P+ F VL ACSHAGLVEEG ++F+SM+ HG+ +H+
Sbjct: 571 GENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHF 630
Query: 491 GCMVDLYCRANLLRKAMEL--IESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILEL 548
C+VDL RA L +A L I V +W +L SAC HG+++LG+ AK ++E
Sbjct: 631 SCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEK 690
Query: 549 EPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASS 591
E D V LSNIYA W + R+++ G K++ S
Sbjct: 691 EKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 212/475 (44%), Gaps = 58/475 (12%)
Query: 73 VFSQIPN-PDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKAS 131
VF ++P D N ++ S + ++ L++++ ++G S
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGS 204
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDK--MSHRDAVTWNIM 189
L G ++H L K GF + LI MY C+ ++DA LVF++ ++ RD VT+N++
Sbjct: 205 -LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 190 IDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGL 249
IDG D+ L ++ +M + +P + +V+ +C + + G +H GL
Sbjct: 264 IDGLA-GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCA---AMGHQVH------GL 313
Query: 250 ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQ 309
A+ + K+ +VS A ++ Y+ A +F+
Sbjct: 314 AIKTGYE-------------------------KYTLVSNATMTMYSSFEDFGAAHKVFES 348
Query: 310 IVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
+ EKDLV W+ MIS Y ++ + A+ ++ M + + PD+ T S ++ ++ L
Sbjct: 349 LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM- 407
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
+ K G + ++NALI Y+K G + +A +FE RKN+ISW+++I+ F +
Sbjct: 408 --VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHN 465
Query: 430 GYANSAMNLFHRMKEEDIE--PNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
G+ + F + E ++ P+ +L C + G + H RH
Sbjct: 466 GFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQ-------THAYVLRH 518
Query: 488 EHY------GCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
+ ++++Y + ++ ++E+ M +V+ W SL+SA HGE E
Sbjct: 519 GQFKETLIGNALINMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGEGE 572
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 14/229 (6%)
Query: 130 ASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIM 189
S+L LG + H + G + I LI MYS C I ++ VF++MS +D V+WN +
Sbjct: 502 TSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSL 561
Query: 190 IDGYCQSGNYDQVLKLYEEMKT-SDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMD-N 247
I Y + G + + Y+ M+ PD VLSAC H+G + G I +++ +
Sbjct: 562 ISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFH 621
Query: 248 GLALSAHLQSALVNMYVNCGAMDLARELY---DKLSSKHLVVSTAMLSGYAKHGMVKDAR 304
G+ + S LV++ G +D A L +K + V A+ S A HG +K +
Sbjct: 622 GVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGK 681
Query: 305 FIFDQIVEKD------LVCWSAMISG---YAESDQPQEALKLFNEMQLR 344
+ ++EK+ V S + +G + E+++ + A+ + M+ R
Sbjct: 682 MVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQR 730
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/538 (28%), Positives = 263/538 (48%), Gaps = 36/538 (6%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVF--------D 176
K +K + ++ G ++HG+ K G F + LI MYS C + + +F D
Sbjct: 133 KLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVD 192
Query: 177 KMSHR--------------------------DAVTWNIMIDGYCQSGNYDQVLKLYEEMK 210
++ D ++WN +I GY Q+G ++ LK+ M+
Sbjct: 193 SVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSME 252
Query: 211 TSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMD 270
+ K D VL+ +L GK +H ++ NG + + S +V++Y CG M
Sbjct: 253 ENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMK 312
Query: 271 LARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQ 330
A + +L +++M+ GY+ G + +A+ +FD + EK+LV W+AM GY Q
Sbjct: 313 YAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQ 372
Query: 331 PQEALKLFNEMQLRNI-VPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNN 389
P L+L PD + M+S + AC+ + + IH ++ + G +
Sbjct: 373 PDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVT 432
Query: 390 ALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEP 449
A +DMY+KCGN+ A+ +F++ ++ + +++MI A HG+ + F M E +P
Sbjct: 433 AFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKP 492
Query: 450 NGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMEL 509
+ + F+ +L AC H GLV EG+K F SMI + I+P HY CM+DLY +A L KA+EL
Sbjct: 493 DEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIEL 552
Query: 510 IESMP-FAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERR 568
+E + + +I G+ ++AC + EL + +++L +E + + ++N YA R
Sbjct: 553 MEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGR 612
Query: 569 WNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSEL 626
W+++ IR M K + S I+ + H+F +D H ++ IY L V +L
Sbjct: 613 WDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDL 670
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 197/447 (44%), Gaps = 73/447 (16%)
Query: 158 LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYE------EMKT 211
L+ +YS + +AR VFD+M R+ +WN +I Y + N + +L+E ++ T
Sbjct: 29 LVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLIT 88
Query: 212 SDT------KPDG------------------------VILCTVLSACGHSGNLSYGKAIH 241
+T K DG + T++ N+ YG+ +H
Sbjct: 89 YNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLH 148
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL--VVSTAMLSGYAKHGM 299
++ G + S+L++MY CG +++ + + V AM++ Y + G
Sbjct: 149 GVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGD 208
Query: 300 VKDARFIFDQIVE-KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAIS 358
+ A +F + E D + W+ +I+GYA++ +EALK+ M+ + D+ + + ++
Sbjct: 209 IDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLN 268
Query: 359 ACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGN------------------ 400
+++ +L + +H KNG + V++ ++D+Y KCGN
Sbjct: 269 VLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYS 328
Query: 401 -------------LIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHR-MKEED 446
++ AK +F+++ KN++ W++M + +S + L + E
Sbjct: 329 ASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANET 388
Query: 447 IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKA 506
P+ ++ + VL ACS +E G+++ + GI + VD+Y + + A
Sbjct: 389 NTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GILMDKKLVTAFVDMYSKCGNVEYA 447
Query: 507 MELIESMPFAPNVIIWGSLMSACQVHG 533
+ +S F + +++ ++++ C HG
Sbjct: 448 ERIFDS-SFERDTVMYNAMIAGCAHHG 473
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 178/440 (40%), Gaps = 74/440 (16%)
Query: 73 VFSQIPN-PDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKAS 131
VF + P DT N L+ +++ + L + + G +S
Sbjct: 215 VFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLK 274
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSAC-------------------------- 165
+L +G E+H K G +S+ F+ +G++ +Y C
Sbjct: 275 SLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIV 334
Query: 166 -----RRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTK-PDGV 219
++++A+ +FD +S ++ V W M GY D VL+L ++T PD +
Sbjct: 335 GYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSL 394
Query: 220 ILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL 279
++ +VL AC + GK IH + G+ + L +A V+MY CG ++ A ++D
Sbjct: 395 VMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSS 454
Query: 280 SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFN 339
+ V+ AM++G A HG ++ + F
Sbjct: 455 FERDTVMYNAMIAGCAHHG-------------------------------HEAKSFQHFE 483
Query: 340 EMQLRNIVPDQITMLSAISACANVG-ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC 398
+M PD+IT ++ +SAC + G L ++ + + +ID+Y K
Sbjct: 484 DMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKA 543
Query: 399 GNLIRAKEVFENMPR--KNVISWSSMINAFAMHGYANSAMNLFHRMKEEDI---EPNGVI 453
L +A E+ E + + K+ + + +NA + N L ++E+ + NG
Sbjct: 544 YRLDKAIELMEGIDQVEKDAVILGAFLNACSW----NKNTELVKEVEEKLLVIEGSNGSR 599
Query: 454 FIGVLYACSHAGLVEEGQKL 473
+I + A + +G +E Q++
Sbjct: 600 YIQIANAYASSGRWDEMQRI 619
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 144/301 (47%), Gaps = 40/301 (13%)
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDAR 304
+ +G L+A + LVN+Y G + AR ++D++ +++ A+++ Y K VK+AR
Sbjct: 15 IKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEAR 74
Query: 305 FIFDQI-VEKDLVCWSAMISGYAESDQPQ-EALKLFNEMQLR---NIVPDQITMLSAISA 359
+F+ E+DL+ ++ ++SG+A++D + EA+++F EM + +I D T+ + +
Sbjct: 75 ELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKL 134
Query: 360 CANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC--------------------- 398
A + + +H K G + ++LI MY+KC
Sbjct: 135 SAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSV 194
Query: 399 ------------GNLIRAKEVFENMPRKN-VISWSSMINAFAMHGYANSAMNLFHRMKEE 445
G++ +A VF P N ISW+++I +A +GY A+ + M+E
Sbjct: 195 ARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEEN 254
Query: 446 DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRK 505
++ + F VL S ++ G+++ + ++ + + G +VD+YC+ ++
Sbjct: 255 GLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG-IVDVYCKCGNMKY 313
Query: 506 A 506
A
Sbjct: 314 A 314
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 215/411 (52%), Gaps = 33/411 (8%)
Query: 183 AVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE 242
A WN ++ Y + + +++Y M S PD L V+ A + + GK +H
Sbjct: 82 AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 243 FIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKD 302
+ G +S + +Y K G ++
Sbjct: 142 VAVRLGFVGDEFCESGFITLY-------------------------------CKAGEFEN 170
Query: 303 ARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACAN 362
AR +FD+ E+ L W+A+I G + + EA+++F +M+ + PD TM+S ++C
Sbjct: 171 ARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGG 230
Query: 363 VGALAQARWIH--TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWS 420
+G L+ A +H K + + N+LIDMY KCG + A +FE M ++NV+SWS
Sbjct: 231 LGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWS 290
Query: 421 SMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINE 480
SMI +A +G A+ F +M+E + PN + F+GVL AC H GLVEEG+ F+ M +E
Sbjct: 291 SMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSE 350
Query: 481 HGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEF 540
+ P HYGC+VDL R L++A +++E MP PNV++WG LM C+ G+VE+ E+
Sbjct: 351 FELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEW 410
Query: 541 AAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASS 591
A ++ELEP +DG VVL+N+YA W DV +R+ M K ++K A S
Sbjct: 411 VAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 165/350 (47%), Gaps = 35/350 (10%)
Query: 80 PDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEI 139
P N ++R R +P + + +Y + R KA + LG E+
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 140 HGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNY 199
H +A +LGF D F ++G I +Y +AR VFD+ R +WN +I G +G
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQ--S 257
++ ++++ +MK S +PD + +V ++CG G+LS +H+ ++ + + +
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN 259
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC 317
+L++MY CG MDLA IF+++ ++++V
Sbjct: 260 SLIDMYGKCGRMDLASH-------------------------------IFEEMRQRNVVS 288
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR-WIHTYA 376
WS+MI GYA + EAL+ F +M+ + P++IT + +SAC + G + + + +
Sbjct: 289 WSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMK 348
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINA 425
+ LS ++D+ ++ G L AK+V E MP K NV+ W ++
Sbjct: 349 SEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 12/248 (4%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF + P N ++ L+ + + ++ ++R G +
Sbjct: 174 VFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGD 233
Query: 133 LYLGLEIHG--LASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMI 190
L L ++H L +K SD + LI MY C R+ A +F++M R+ V+W+ MI
Sbjct: 234 LSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMI 293
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH-----EFIM 245
GY +GN + L+ + +M+ +P+ + VLSAC H G + GK EF +
Sbjct: 294 VGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFEL 353
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK-HLVVSTAMLSGYAKHGMVKDAR 304
+ GL +H +V++ G + A+++ +++ K +++V ++ G K G V+ A
Sbjct: 354 EPGL---SHY-GCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAE 409
Query: 305 FIFDQIVE 312
++ +VE
Sbjct: 410 WVAPYMVE 417
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 261/523 (49%), Gaps = 43/523 (8%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F I + D + ++ ++ + L++ + R+ + + +A
Sbjct: 357 LFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAA 416
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
LG IH A K S+ T +I+MY+ C R A F+++ +DAV +N + G
Sbjct: 417 SRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQG 476
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y Q G+ ++ +Y+ MK PD + +L C + + G ++ I+ +G
Sbjct: 477 YTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSE 536
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
H+ AL+NM+ C A+ A L+DK E
Sbjct: 537 CHVAHALINMFTKCDALAAAIVLFDKCG------------------------------FE 566
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
K V W+ M++GY Q +EA+ F +M++ P+ +T ++ + A A + AL +
Sbjct: 567 KSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSV 626
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H+ + GF V N+L+DMYAKCG + +++ F + K ++SW++M++A+A HG A
Sbjct: 627 HSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLA 686
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
+ A++LF M+E +++P+ V F+ VL AC HAGLVEEG+++F M H I EHY C
Sbjct: 687 SCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYAC 746
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
MVDL +A L +A+E++ M +V +WG+L+++ ++H + L A Q+++LEP
Sbjct: 747 MVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEP-- 804
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEI 595
+ + Y+++RR +V + + I K A S +E+
Sbjct: 805 -----LNPSHYSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 225/481 (46%), Gaps = 36/481 (7%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF ++ D N ++ L+++ L L+ +R AVSK
Sbjct: 157 VFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEK 216
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+ +HGL K GF +GLI MY C + A VF+++ +D +W M+
Sbjct: 217 SDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAA 274
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y +G +++VL+L++ M+ D + + V + L A + G+L G AIH++ + GL
Sbjct: 275 YAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLI-- 332
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ V+T+++S Y+K G ++ A +F I +
Sbjct: 333 -----------------------------GDVSVATSLMSMYSKCGELEIAEQLFINIED 363
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
+D+V WSAMI+ Y ++ Q EA+ LF +M +I P+ +T+ S + CA V A + I
Sbjct: 364 RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI 423
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H YA K L A+I MYAKCG A + FE +P K+ ++++++ + G A
Sbjct: 424 HCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDA 483
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
N A +++ MK + P+ +G+L C+ G ++ +I +HG
Sbjct: 484 NKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII-KHGFDSECHVAHA 542
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFAAKQILELEP 550
+++++ + + L A+ L + F + + W +M+ +HG+ E + F ++ + +P
Sbjct: 543 LINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQP 602
Query: 551 D 551
+
Sbjct: 603 N 603
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 203/448 (45%), Gaps = 35/448 (7%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKL-RRVGXXXXXXXXXXXXKAVSKAS 131
+F + +P N ++R +R+ + L + + G KA + +
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
GL IH L +++G SD +I T L+ MY R ++ AR VFDKM +D VTWN M+
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
G Q+G L L+ +M++ D V L ++ A + +H ++ G
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF 234
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ S L++MY NC +LY A +F+++
Sbjct: 235 A--FSSGLIDMYCNCA------DLYA-------------------------AESVFEEVW 261
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
KD W M++ YA + +E L+LF+ M+ ++ +++ SA+ A A VG L +
Sbjct: 262 RKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIA 321
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
IH YA + G +SV +L+ MY+KCG L A+++F N+ ++V+SWS+MI ++ G
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQ 381
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
+ A++LF M I+PN V VL C+ G+ + I I E
Sbjct: 382 HDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD-IESELETAT 440
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNV 519
++ +Y + A++ E +P V
Sbjct: 441 AVISMYAKCGRFSPALKAFERLPIKDAV 468
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 152/321 (47%), Gaps = 46/321 (14%)
Query: 137 LEIHG--LASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
L++HG + S L H+ LI YS +R +R++FD + V WN MI GY
Sbjct: 22 LQVHGSLIVSGLKPHNQ------LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYT 75
Query: 195 QSGNYDQVLKLYEEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
++G + + L + M + PD L AC S + G IH+ I + GL
Sbjct: 76 RAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDV 135
Query: 254 HLQSALVNMYVNCGAMDL--ARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
++ +ALV MY C A DL AR+++DK+ K +V M+SG A++G
Sbjct: 136 YIGTALVEMY--CKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG------------- 180
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
C SA AL LF++M+ + D +++ + I A + + R
Sbjct: 181 -----CSSA-------------ALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRC 222
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
+H K GF + S + LIDMY C +L A+ VFE + RK+ SW +M+ A+A +G+
Sbjct: 223 LHGLVIKKGFIFAFS--SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGF 280
Query: 432 ANSAMNLFHRMKEEDIEPNGV 452
+ LF M+ D+ N V
Sbjct: 281 FEEVLELFDLMRNYDVRMNKV 301
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 126/247 (51%), Gaps = 12/247 (4%)
Query: 303 ARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEM-QLRNIVPDQITMLSAISACA 361
+R IFD + + +V W++MI GY + +EAL F M + + I PD+ + A+ ACA
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 362 NVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSS 421
+ IH + G + + AL++MY K +L+ A++VF+ M K+V++W++
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
M++ A +G +++A+ LFH M+ ++ + V ++ A S + + L +I +
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG 231
Query: 482 GIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFA 541
I ++D+YC L A + E + + + WG++M+A +G E
Sbjct: 232 FIFAFSSG---LIDMYCNCADLYAAESVFEEV-WRKDESSWGTMMAAYAHNGFFE----- 282
Query: 542 AKQILEL 548
++LEL
Sbjct: 283 --EVLEL 287
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 152/527 (28%), Positives = 266/527 (50%), Gaps = 18/527 (3%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N L+ R+ Q ++ +Y+++ G KA + G +HG
Sbjct: 153 NVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEV 212
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL 205
+ ++ LI+MY ++ AR +FD+MS RDAV+WN +I+ Y + KL
Sbjct: 213 SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKL 272
Query: 206 YEEMKTSDTKPDGVILCTVLSACGHSGNL-----------SYGKAIHEFIMDNGLALSAH 254
+ M S + V T+ C +GN + I M NGL +H
Sbjct: 273 LDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSH 332
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
+ + +C + +D + V ++++ Y++ ++ A +F Q+
Sbjct: 333 IGALKWGKVFHCLVIRSCSFSHDIDN-----VRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
L W+++ISG+A +++ +E L EM L P+ IT+ S + A VG L + H
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHC 447
Query: 375 YA-DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYAN 433
Y + + L + N+L+DMYAK G +I AK VF++M +++ ++++S+I+ + G
Sbjct: 448 YILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGE 507
Query: 434 SAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCM 493
A+ F M I+P+ V + VL ACSH+ LV EG LF+ M + GI R EHY CM
Sbjct: 508 VALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCM 567
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAA-KQILELEPDH 552
VDLYCRA L KA ++ ++P+ P+ + +L+ AC +HG +GE+AA K +LE +P+H
Sbjct: 568 VDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEH 627
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEV 599
G ++L+++YA W+ + ++ +++ G+ K + +E ++E+
Sbjct: 628 LGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 203/433 (46%), Gaps = 9/433 (2%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G ++H G D + L+ YSA + +A+ + + + WN++I Y +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
+ + + + +Y+ M + + D +V+ AC + +YG+ +H I + + ++
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI----V 311
+AL++MY G +D+AR L+D++S + V A+++ Y + +A + D++ V
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
E +V W+ + G E+ AL M+ N+ + M++ + AC+++GAL +
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 372 IHTYADKN-GFGRSL-SVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
H ++ F + +V N+LI MY++C +L A VF+ + ++ +W+S+I+ FA +
Sbjct: 342 FHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
+ L M PN + +L + G ++ G++ ++
Sbjct: 402 ERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL 461
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQV--HGEVELGEFAAKQILE 547
+ +VD+Y ++ + A + +SM + + + SL+ GEV L F
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 548 LEPDHDGALVVLS 560
++PDH + VLS
Sbjct: 521 IKPDHVTMVAVLS 533
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 149/361 (41%), Gaps = 51/361 (14%)
Query: 234 LSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL----VVSTA 289
L Y HEF++ + ++L++ V ++L+ S L V+
Sbjct: 72 LRYQSGSHEFVL--------YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 290 MLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPD 349
+++ Y+ ++ +A+ I + + W+ +I Y + + QE++ ++ M + I D
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 350 QITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFE 409
+ T S I ACA + A R +H + + +L V NALI MY + G + A+ +F+
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 410 NMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPN------------------- 450
M ++ +SW+++IN + A L RM +E +
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 451 ----------------GVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY-GCM 493
V I L ACSH G ++ G+ +I + ++ +
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL 363
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQIL--ELEPD 551
+ +Y R + LR A + + + A ++ W S++S + E F K++L P+
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVE-ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 552 H 552
H
Sbjct: 423 H 423
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 152/527 (28%), Positives = 266/527 (50%), Gaps = 18/527 (3%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N L+ R+ Q ++ +Y+++ G KA + G +HG
Sbjct: 153 NVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEV 212
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKL 205
+ ++ LI+MY ++ AR +FD+MS RDAV+WN +I+ Y + KL
Sbjct: 213 SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKL 272
Query: 206 YEEMKTSDTKPDGVILCTVLSACGHSGNL-----------SYGKAIHEFIMDNGLALSAH 254
+ M S + V T+ C +GN + I M NGL +H
Sbjct: 273 LDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSH 332
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
+ + +C + +D + V ++++ Y++ ++ A +F Q+
Sbjct: 333 IGALKWGKVFHCLVIRSCSFSHDIDN-----VRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
L W+++ISG+A +++ +E L EM L P+ IT+ S + A VG L + H
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHC 447
Query: 375 YA-DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYAN 433
Y + + L + N+L+DMYAK G +I AK VF++M +++ ++++S+I+ + G
Sbjct: 448 YILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGE 507
Query: 434 SAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCM 493
A+ F M I+P+ V + VL ACSH+ LV EG LF+ M + GI R EHY CM
Sbjct: 508 VALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCM 567
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAA-KQILELEPDH 552
VDLYCRA L KA ++ ++P+ P+ + +L+ AC +HG +GE+AA K +LE +P+H
Sbjct: 568 VDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEH 627
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEV 599
G ++L+++YA W+ + ++ +++ G+ K + +E ++E+
Sbjct: 628 LGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 203/433 (46%), Gaps = 9/433 (2%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G ++H G D + L+ YSA + +A+ + + + WN++I Y +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
+ + + + +Y+ M + + D +V+ AC + +YG+ +H I + + ++
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI----V 311
+AL++MY G +D+AR L+D++S + V A+++ Y + +A + D++ V
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
E +V W+ + G E+ AL M+ N+ + M++ + AC+++GAL +
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 372 IHTYADKN-GFGRSL-SVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
H ++ F + +V N+LI MY++C +L A VF+ + ++ +W+S+I+ FA +
Sbjct: 342 FHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
+ L M PN + +L + G ++ G++ ++
Sbjct: 402 ERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL 461
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQV--HGEVELGEFAAKQILE 547
+ +VD+Y ++ + A + +SM + + + SL+ GEV L F
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 548 LEPDHDGALVVLS 560
++PDH + VLS
Sbjct: 521 IKPDHVTMVAVLS 533
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 149/361 (41%), Gaps = 51/361 (14%)
Query: 234 LSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL----VVSTA 289
L Y HEF++ + ++L++ V ++L+ S L V+
Sbjct: 72 LRYQSGSHEFVL--------YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 290 MLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPD 349
+++ Y+ ++ +A+ I + + W+ +I Y + + QE++ ++ M + I D
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 350 QITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFE 409
+ T S I ACA + A R +H + + +L V NALI MY + G + A+ +F+
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 410 NMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPN------------------- 450
M ++ +SW+++IN + A L RM +E +
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 451 ----------------GVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY-GCM 493
V I L ACSH G ++ G+ +I + ++ +
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL 363
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQIL--ELEPD 551
+ +Y R + LR A + + + A ++ W S++S + E F K++L P+
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVE-ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 552 H 552
H
Sbjct: 423 H 423
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 212/397 (53%), Gaps = 7/397 (1%)
Query: 204 KLYEEMKTSDTKPDGVILCTVLSACG--HSGNLSYGKAIHEFIMDNGLALSAHLQSALVN 261
+ + EM+ PD V AC +G+L+ K +H + GL + L+
Sbjct: 101 RFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIR 160
Query: 262 MYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAM 321
+Y +D A +L+D+ + +V ++ G K + AR +FD + +DLV W+++
Sbjct: 161 VYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSL 220
Query: 322 ISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGF 381
ISGYA+ + +EA+KLF+EM + PD + ++S +SACA G + + IH Y +
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 382 GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHR 441
+ L+D YAKCG + A E+FE K + +W++MI AMHG ++ F +
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRK 340
Query: 442 MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRAN 501
M I+P+GV FI VL CSH+GLV+E + LF M + + + +HYGCM DL RA
Sbjct: 341 MVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAG 400
Query: 502 LLRKAMELIESMPF----APNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALV 557
L+ +A E+IE MP ++ W L+ C++HG +E+ E AA ++ L P+ G
Sbjct: 401 LIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYK 460
Query: 558 VLSNIYAKERRWNDVGLIRQSM-ANKGISKEKASSRV 593
V+ +YA RW +V +R+ + +K + K S+V
Sbjct: 461 VMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 177/423 (41%), Gaps = 77/423 (18%)
Query: 73 VFSQIPNPDTHFCNQLLRLLS-RSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVS--K 129
VF I NP T N ++R+ + P+ ++ + ++RR KA + K
Sbjct: 70 VFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKK 129
Query: 130 ASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYS-------------------------- 163
L L +H A + G SD F LI +YS
Sbjct: 130 NGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVL 189
Query: 164 -----ACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDG 218
R I+ AR +FD M RD V+WN +I GY Q + + +KL++EM KPD
Sbjct: 190 IDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDN 249
Query: 219 VILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDK 278
V + + LSAC SG+ GKAIH++ L + + L + LV+ Y CG +D A E+++
Sbjct: 250 VAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFEL 309
Query: 279 LSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLF 338
S K L AM++G A HG + + F
Sbjct: 310 CSDKTLFTWNAMITGLAMHG-------------------------------NGELTVDYF 338
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQAR----WIHTYADKNGFGRSLSVNNALIDM 394
+M I PD +T +S + C++ G + +AR + + D N R + + D+
Sbjct: 339 RKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVN---REMKHYGCMADL 395
Query: 395 YAKCGNLIRAKEVFENMP-----RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEP 449
+ G + A E+ E MP R+ +++WS ++ +HG A +R+K E
Sbjct: 396 LGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPED 455
Query: 450 NGV 452
GV
Sbjct: 456 GGV 458
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 123/275 (44%), Gaps = 11/275 (4%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F +P D N L+ ++ + + L+ ++ +G A +++
Sbjct: 205 LFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGD 264
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
G IH + D F+ TGL+ Y+ C I A +F+ S + TWN MI G
Sbjct: 265 WQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITG 324
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
GN + + + +M +S KPDGV +VL C HSG + + + + M + ++
Sbjct: 325 LAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFD-QMRSLYDVN 383
Query: 253 AHLQ--SALVNMYVNCGAMDLARELYDKL-----SSKHLVVSTAMLSGYAKHGMVKDARF 305
++ + ++ G ++ A E+ +++ + + L+ + +L G HG ++ A
Sbjct: 384 REMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEK 443
Query: 306 IFDQI---VEKDLVCWSAMISGYAESDQPQEALKL 337
+++ +D + M+ YA +++ +E +K+
Sbjct: 444 AANRVKALSPEDGGVYKVMVEMYANAERWEEVVKV 478
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/566 (27%), Positives = 277/566 (48%), Gaps = 77/566 (13%)
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
+G ++ KLG+ + +QT ++ MYS+C + AR +FD +++RDAV WN MI G
Sbjct: 217 MGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSL 276
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
++ + L + M S P VL+ C G+ S GK IH I+ +
Sbjct: 277 KNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP 336
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDA----------- 303
L +AL++MY +CG M A ++ ++ + +LV +++SG +++G + A
Sbjct: 337 LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMS 396
Query: 304 --------------------RFIFDQIV---------EKDLVCWSAMISGYAESDQPQEA 334
RF+ +++ E+ + + ++S Y ++ + + A
Sbjct: 397 TPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESA 456
Query: 335 LKLFNEMQLRNIV-------------------------------PDQITMLSAISACANV 363
K+F+ M+ R++V D ++ S I AC+++
Sbjct: 457 QKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDM 516
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMI 423
L Q H A + GF +SV AL+DMY K G A+ +F ++ W+SM+
Sbjct: 517 AMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSML 576
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
A++ HG A++ F ++ E P+ V ++ +L ACSH G +G+ L++ M E GI
Sbjct: 577 GAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGI 635
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESMPFAPN-VIIWGSLMSACQVHGEVELGEFAA 542
+HY CMV+L +A L+ +A+ELIE P N +W +L+SAC +++G +AA
Sbjct: 636 KAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAA 695
Query: 543 KQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEI-NNEVHV 601
+QIL+L+P+ ++LSN+YA RW DV +R+ + SK+ S +E+ NN V
Sbjct: 696 EQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQV 755
Query: 602 FMMADRYHKQSREIYKKLEEVVSELK 627
F D + + E+ + ++ ++ LK
Sbjct: 756 FSSGD---QSNPEVVSQAQDELNRLK 778
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 196/447 (43%), Gaps = 47/447 (10%)
Query: 138 EIHGLASKLGFHS---DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
+IH L G + P+ LI+MY C + AR VFDKM HR+ V++N + Y
Sbjct: 115 QIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYS 174
Query: 195 QSGNY-DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
++ ++ L M KP+ +++ C ++ G +++ I+ G
Sbjct: 175 RNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGY---- 230
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
S ++VV T++L Y+ G ++ AR IFD + +
Sbjct: 231 ---------------------------SDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR 263
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
D V W+ MI G ++D+ ++ L F M + + P Q T ++ C+ +G+ + + IH
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 374 TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYAN 433
+ L ++NAL+DMY CG++ A VF + N++SW+S+I+ + +G+
Sbjct: 324 ARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGE 383
Query: 434 SAMNLFHR-MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
AM ++ R ++ P+ F + A + G KL + + G
Sbjct: 384 QAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHG-KLLHGQVTKLGYERSVFVGTT 442
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILEL--EP 550
++ +Y + A ++ + M +V++W ++ H + E A + +E+ E
Sbjct: 443 LLSMYFKNREAESAQKVFDVMK-ERDVVLWTEMIVG---HSRLGNSELAVQFFIEMYREK 498
Query: 551 DHDGALVVLSNIYAKERRWNDVGLIRQ 577
+ + S I A +D+ ++RQ
Sbjct: 499 NRSDGFSLSSVIGA----CSDMAMLRQ 521
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 183/429 (42%), Gaps = 46/429 (10%)
Query: 152 PFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIM--IDGYCQSGN--YDQVLKLYE 207
P+ LI+MY C + AR VFDKM R+ VT + + Y G+ + Q++KL
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKL-G 80
Query: 208 EMKTSDTKPDGVILCTVLS---ACGHSGNLSYGKAIHEFIMDNGLAL---SAHLQSALVN 261
+ P I +V+ C L + IH ++ G S + + L++
Sbjct: 81 SFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLIS 140
Query: 262 MYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAM 321
MYV CG+++ AR+++DK+ +++V A+ S Y+++
Sbjct: 141 MYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRN------------------------ 176
Query: 322 ISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGF 381
D A L M + P+ T S + CA + + +++ K G+
Sbjct: 177 ------PDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGY 230
Query: 382 GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHR 441
++ V +++ MY+ CG+L A+ +F+ + ++ ++W++MI + + F
Sbjct: 231 SDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRN 290
Query: 442 MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRAN 501
M ++P + VL CS G G+ + + +I +A ++D+YC
Sbjct: 291 MLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD-NALLDMYCSCG 349
Query: 502 LLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILEL---EPDHDGALVV 558
+R+A + + PN++ W S++S C +G E +++L + PD
Sbjct: 350 DMREAFYVFGRI-HNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAA 408
Query: 559 LSNIYAKER 567
+S ER
Sbjct: 409 ISATAEPER 417
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 29/240 (12%)
Query: 243 FIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKD 302
F+ + A + + L++MYV C +++ AR+++DK+ +++V + A V
Sbjct: 12 FVETDAAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVT---LFGLSAVFEYVSM 68
Query: 303 ARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACAN 362
+ QI++ + ++ M L I + + C +
Sbjct: 69 GSSLHSQIIKLG-------------------SFQMIFFMPLNEIASSVVEL---TRKCVS 106
Query: 363 VGALAQARWIHTYADKNGFG---RSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISW 419
+ L +AR IH G G S NN LI MY +CG+L +A++VF+ MP +NV+S+
Sbjct: 107 ITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSY 166
Query: 420 SSMINAFAMH-GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI 478
+++ +A++ + +A+ A L M E ++PN F ++ C+ V G L S +I
Sbjct: 167 NALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQII 226
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVT 185
A S + L G H LA + GF + L+ MY + A +F S+ D
Sbjct: 512 ACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKC 571
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
WN M+ Y Q G ++ L +E++ + PD V ++L+AC H G+ GK + +
Sbjct: 572 WNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMK 631
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDK 278
+ G+ S +VN+ G +D A EL ++
Sbjct: 632 EQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQ 664
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/448 (32%), Positives = 229/448 (51%), Gaps = 34/448 (7%)
Query: 148 FHSDPFIQTGLIAMYSACRRIMDARL-VFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLY 206
+S+ + + L+ YS + L VF M +R+ +WNI+I + +SG + + L+
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 207 EEM-KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVN 265
M + S +PD L +L AC S G IH + G + S + SALV MYV
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV- 180
Query: 266 CGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGY 325
D+ + L+ AR +FD + +D V ++AM GY
Sbjct: 181 ----DMGKLLH--------------------------ARKLFDDMPVRDSVLYTAMFGGY 210
Query: 326 AESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSL 385
+ + L +F EM D + M+S + AC +GAL + +H + + L
Sbjct: 211 VQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGL 270
Query: 386 SVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEE 445
++ NA+ DMY KC L A VF NM R++VISWSS+I + + G + LF M +E
Sbjct: 271 NLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKE 330
Query: 446 DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRK 505
IEPN V F+GVL AC+H GLVE+ L+ ++ E+ I P +HY + D RA LL +
Sbjct: 331 GIEPNAVTFLGVLSACAHGGLVEKSW-LYFRLMQEYNIVPELKHYASVADCMSRAGLLEE 389
Query: 506 AMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAK 565
A + +E MP P+ + G+++S C+V+G VE+GE A+++++L+P V L+ +Y+
Sbjct: 390 AEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSA 449
Query: 566 ERRWNDVGLIRQSMANKGISKEKASSRV 593
R+++ +RQ M K ISK S +
Sbjct: 450 AGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 186/444 (41%), Gaps = 72/444 (16%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKL-RRVGXXXXXXXXXXXXKAVSKAS 131
VF +P + N ++ SRS ++ L+ ++ R +A S +
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
G IH L KLGF S F+ + L+ MY +++ AR +FD M RD+V + M
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
GY Q G L ++ EM S D V++ ++L ACG G L +GK++H + + L
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+L +A+ +MYV C +D A ++ +S + ++ ++++ GY G
Sbjct: 269 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDG------------- 315
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
D+V + KLF+EM I P+ +T L +SACA+ G L + W
Sbjct: 316 --DVVM----------------SFKLFDEMLKEGIEPNAVTFLGVLSACAH-GGLVEKSW 356
Query: 372 IH-TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
++ + L ++ D ++ G L A++ E+MP
Sbjct: 357 LYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMP------------------ 398
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH-EH 489
++P+ + VL C G VE G+++ +I + PR +
Sbjct: 399 ----------------VKPDEAVMGAVLSGCKVYGNVEVGERVARELIQ---LKPRKASY 439
Query: 490 YGCMVDLYCRANLLRKAMELIESM 513
Y + LY A +A L + M
Sbjct: 440 YVTLAGLYSAAGRFDEAESLRQWM 463
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 164/590 (27%), Positives = 282/590 (47%), Gaps = 46/590 (7%)
Query: 105 YQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSA 164
+ ++R +G S +L G +IH K+GF + L+ MY
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Query: 165 CRRI-MDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCT 223
C ++A VF M + V+W +I G G L EM + +P+ V L
Sbjct: 373 CSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSG 432
Query: 224 VLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKH 283
VL AC ++ IH ++ L H+
Sbjct: 433 VLRACSKLRHVRRVLEIHAYL------LRRHVDG-------------------------E 461
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL 343
+VV +++ YA V A + + +D + ++++++ + E + + AL + N M
Sbjct: 462 MVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYG 521
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR 403
I DQ+++ ISA AN+GAL + +H Y+ K+GF + SV N+L+DMY+KCG+L
Sbjct: 522 DGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLED 581
Query: 404 AKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
AK+VFE + +V+SW+ +++ A +G+ +SA++ F M+ ++ EP+ V F+ +L ACS+
Sbjct: 582 AKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSN 641
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWG 523
L + G + F M + I P+ EHY +V + RA L +A ++E+M PN +I+
Sbjct: 642 GRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFK 701
Query: 524 SLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKG 583
+L+ AC+ G + LGE A + L L P ++L+++Y + + R M K
Sbjct: 702 TLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKR 761
Query: 584 ISKEKASSRVEINNEVHVFMMADRYH-KQSREIYKKLEEVVSELKLVSYTPSTSGXXXXX 642
+SK+ S VE+ +VH F+ D ++ IY ++E + E+K +P
Sbjct: 762 LSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG-SPYRGN----- 815
Query: 643 XXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
+HS K A+ YG I E+ + +VKN +C+DCH F+ +
Sbjct: 816 ------ENASFHSAKQAVVYGFIYA-SPEAPVHVVKNKILCKDCHEFVSI 858
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 215/488 (44%), Gaps = 52/488 (10%)
Query: 88 LLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLG 147
++ ++S + L L++++ G ++ + + G +HG K G
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTG 154
Query: 148 FHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYE 207
F + + + L +YS C + +A +F + + D ++W +MI + + + L+ Y
Sbjct: 155 FEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYS 214
Query: 208 EMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCG 267
EM + P+ +L A G L +GK IH I+ G+ L+ L+++LV+ Y
Sbjct: 215 EMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFS 273
Query: 268 AMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAE 327
M+ DA + + E+D+ W++++SG+
Sbjct: 274 KME-------------------------------DAVRVLNSSGEQDVFLWTSVVSGFVR 302
Query: 328 SDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSV 387
+ + +EA+ F EM+ + P+ T + +S C+ V +L + IH+ K GF S V
Sbjct: 303 NLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 388 NNALIDMYAKC-GNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEED 446
NAL+DMY KC + + A VF M NV+SW+++I HG+ L M + +
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 447 IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKA 506
+EPN V GVL ACS V ++ + ++ H + +VD Y + + A
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYA 481
Query: 507 MELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKE 566
+I SM N I + SL++ ELG+ H+ AL V++ +Y
Sbjct: 482 WNVIRSMKRRDN-ITYTSLVTRFN-----ELGK------------HEMALSVINYMYGDG 523
Query: 567 RRWNDVGL 574
R + + L
Sbjct: 524 IRMDQLSL 531
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 136/273 (49%), Gaps = 5/273 (1%)
Query: 290 MLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPD 349
+LS Y K + +AR +FD++ + + W+ MIS + +S + AL LF EM P+
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPN 123
Query: 350 QITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFE 409
+ T S + +CA + ++ +H K GF + V ++L D+Y+KCG A E+F
Sbjct: 124 EFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFS 183
Query: 410 NMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEE 469
++ + ISW+ MI++ A+ + M + + PN F+ +L A S GL E
Sbjct: 184 SLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EF 242
Query: 470 GQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSAC 529
G+ + S++I GI +VD Y + + + A+ ++ S +V +W S++S
Sbjct: 243 GKTIHSNII-VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTSVVSGF 300
Query: 530 --QVHGEVELGEFAAKQILELEPDHDGALVVLS 560
+ + +G F + L L+P++ +LS
Sbjct: 301 VRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
IH K G +L + N L+ +Y K + A+++F+ M + V +W+ MI+AF
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
SA++LF M PN F V+ +C+ + G ++ S+I + G
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVI-KTGFEGNSVVGS 163
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
+ DLY + ++A EL S+ A + I W ++S+
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNA-DTISWTMMISS 199
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 226/444 (50%), Gaps = 38/444 (8%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ 195
G+++H L K G S F T L+ Y C I++AR VF+ + RD V WN ++ Y
Sbjct: 161 GIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVL 220
Query: 196 SGNYDQVLKLYEEMKTSDT--KPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
+G D+ L + M + + D ++LSAC + GK IH +
Sbjct: 221 NGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDI 276
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
+ +AL+NMY + ARE ++ + +++V AM+ G+A++G
Sbjct: 277 PVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNG--------------- 321
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
+ +EA++LF +M L N+ PD++T S +S+CA A+ + + +
Sbjct: 322 ----------------EGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQ 365
Query: 374 TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYAN 433
K G LSV N+LI Y++ GNL A F ++ +++SW+S+I A A HG+A
Sbjct: 366 AMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAE 425
Query: 434 SAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCM 493
++ +F M ++ ++P+ + F+ VL ACSH GLV+EG + F M + I EHY C+
Sbjct: 426 ESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCL 484
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHD 553
+DL RA + +A +++ SMP P+ + C +H + E ++ AK++LE+EP
Sbjct: 485 IDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKP 544
Query: 554 GALVVLSNIYAKERRWNDVGLIRQ 577
+LSN Y E WN L+R+
Sbjct: 545 VNYSILSNAYVSEGHWNQAALLRK 568
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 200/429 (46%), Gaps = 45/429 (10%)
Query: 140 HGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQ-SGN 198
HG K G ++ F+Q L+ Y+ R DA +FD+M R+ VTWNI+I G Q G+
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 199 YDQVLKL----YEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
+ L + +D D V ++ C S N+ G +H ++ GL S
Sbjct: 119 TNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCF 178
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
++LV+ Y C G++ +AR +F+ ++++D
Sbjct: 179 PSTSLVHFYGKC-------------------------------GLIVEARRVFEAVLDRD 207
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEM--QLRNIVPDQITMLSAISACANVGALAQARWI 372
LV W+A++S Y + EA L M D T S +SAC + Q + I
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQI 263
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H K + + V AL++MYAK +L A+E FE+M +NV+SW++MI FA +G
Sbjct: 264 HAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEG 323
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
AM LF +M E+++P+ + F VL +C+ + E +++ +M+ + G A
Sbjct: 324 REAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV-QAMVTKKGSADFLSVANS 382
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELG-EFAAKQILELEPD 551
++ Y R L +A+ S+ P+++ W S++ A HG E + + +L+PD
Sbjct: 383 LISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPD 441
Query: 552 HDGALVVLS 560
L VLS
Sbjct: 442 KITFLEVLS 450
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 140/315 (44%), Gaps = 28/315 (8%)
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESD-----QPQEALKLF 338
L + +L Y K DA +FD++ +++V W+ +I G + D +
Sbjct: 71 LFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYL 130
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC 398
+ + ++ D ++ + I C + + +H K G S + +L+ Y KC
Sbjct: 131 SRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKC 190
Query: 399 GNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNG--VIFIG 456
G ++ A+ VFE + ++++ W+++++++ ++G + A L M + G F
Sbjct: 191 GLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSS 250
Query: 457 VLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY------GCMVDLYCRANLLRKAMELI 510
+L AC +E+G+++ H I + + ++++Y ++N L A E
Sbjct: 251 LLSACR----IEQGKQI-------HAILFKVSYQFDIPVATALLNMYAKSNHLSDARECF 299
Query: 511 ESMPFAPNVIIWGSLMSACQVHGE-VELGEFAAKQILE-LEPDHDGALVVLSNIYAKERR 568
ESM NV+ W +++ +GE E + +LE L+PD VLS+
Sbjct: 300 ESM-VVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAI 358
Query: 569 WNDVGLIRQSMANKG 583
W ++ ++ + KG
Sbjct: 359 W-EIKQVQAMVTKKG 372
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 90/181 (49%), Gaps = 7/181 (3%)
Query: 361 ANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWS 420
A++ L+ + H + K G SL + N L+ Y K A ++F+ MP +N+++W+
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN 106
Query: 421 SMINAFAMH-GYANSAMNL----FHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFS 475
+I+ G N +L R+ D+ + V F+G++ C+ + ++ G +L
Sbjct: 107 ILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHC 166
Query: 476 SMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEV 535
M+ + G+ +V Y + L+ +A + E++ ++++W +L+S+ ++G +
Sbjct: 167 LMVKQ-GLESSCFPSTSLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNALVSSYVLNGMI 224
Query: 536 E 536
+
Sbjct: 225 D 225
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 229/412 (55%), Gaps = 7/412 (1%)
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIM 245
+N +I Y +G Y L L+ M S +P+ + +++ A S ++SYG A+H +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
G +Q++ V Y G ++ +R+++D + + +V ++L ++G + A
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN----IVPDQITMLSAISACA 361
F ++ D+V W+ +I+G+++ +AL +F EM ++N I P++ T +S +S+CA
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEM-IQNERAVITPNEATFVSVLSSCA 232
Query: 362 NV--GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISW 419
N G + + IH Y + ++ AL+DMY K G+L A +F+ + K V +W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 420 SSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMIN 479
+++I+A A +G A+ +F MK + PNG+ + +L AC+ + LV+ G +LFSS+ +
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 480 EHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGE 539
E+ I P EHYGC+VDL RA LL A I+S+PF P+ + G+L+ AC++H ELG
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 540 FAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASS 591
KQ++ L+P H G V LS A + W++ +R++M GI K A S
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 123/273 (45%), Gaps = 67/273 (24%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYS--------------------- 163
KA + ++ G+ +HG A K GF DPF+QT + Y
Sbjct: 94 KAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVV 153
Query: 164 ACRRIMD----------ARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD 213
AC ++D A F +M D V+W +I+G+ + G + + L ++ EM ++
Sbjct: 154 ACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNE 213
Query: 214 ---TKPDGVILCTVLSACGH--SGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGA 268
P+ +VLS+C + G + GK IH ++M + L+ L +AL++MY G
Sbjct: 214 RAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGD 273
Query: 269 MDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAES 328
+++A ++D++ K + A++S A +G
Sbjct: 274 LEMALTIFDQIRDKKVCAWNAIISALASNG------------------------------ 303
Query: 329 DQPQEALKLFNEMQLRNIVPDQITMLSAISACA 361
+P++AL++F M+ + P+ IT+L+ ++ACA
Sbjct: 304 -RPKQALEMFEMMKSSYVHPNGITLLAILTACA 335
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 132 ALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
+ LG +IHG + T L+ MY + A +FD++ + WN +I
Sbjct: 238 GIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIIS 297
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYG 237
+G Q L+++E MK+S P+G+ L +L+AC S + G
Sbjct: 298 ALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 218/383 (56%), Gaps = 2/383 (0%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
+IH K +D + LI++ S+ A LVF+++ TWN+MI +
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNH 97
Query: 198 NYDQVLKLYEEMKTS-DTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQ 256
+ L L+ M S ++ D V+ AC S ++ G +H + G Q
Sbjct: 98 KPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQ 157
Query: 257 SALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV 316
+ L+++Y CG D R+++DK+ + +V T ML G + + A +F+Q+ +++V
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 317 CWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYA 376
W+AMI+ Y ++ +P EA +LF MQ+ ++ P++ T+++ + A +G+L+ RW+H YA
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAM 436
KNGF + ALIDMY+KCG+L A++VF+ M K++ +W+SMI + +HG A+
Sbjct: 278 HKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEAL 337
Query: 437 NLFHRMKEE-DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
+LF M+EE +EP+ + F+GVL AC++ G V++G + F+ MI +GI+P EH CM+
Sbjct: 338 SLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQ 397
Query: 496 LYCRANLLRKAMELIESMPFAPN 518
L +A + KA L+ESM P+
Sbjct: 398 LLEQALEVEKASNLVESMDSDPD 420
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 164/355 (46%), Gaps = 40/355 (11%)
Query: 32 QLKQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLRL 91
QLKQIH +I++ N +N VF+Q+ +P T N ++R
Sbjct: 35 QLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASL--VFNQLQSPSTFTWNLMIRS 92
Query: 92 LSRSPTPQNTLFLY-QKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHS 150
LS + P+ L L+ + KA +S++ LG ++HGLA K GF +
Sbjct: 93 LSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFN 152
Query: 151 DPFIQTGLIAMYSAC------RRIMD-------------------------ARLVFDKMS 179
D F Q L+ +Y C R++ D A +VF++M
Sbjct: 153 DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP 212
Query: 180 HRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKA 239
R+ V+W MI Y ++ D+ +L+ M+ D KP+ + +L A G+LS G+
Sbjct: 213 MRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRW 272
Query: 240 IHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGM 299
+H++ NG L L +AL++MY CG++ AR+++D + K L +M++ HG
Sbjct: 273 VHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGC 332
Query: 300 VKDARFIFDQI-----VEKDLVCWSAMISGYAESDQPQEALKLFNEM-QLRNIVP 348
++A +F+++ VE D + + ++S A + ++ L+ F M Q+ I P
Sbjct: 333 GEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISP 387
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 215/399 (53%), Gaps = 44/399 (11%)
Query: 199 YDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNL-SYGKAIHEFIMD--NGLALSAHL 255
YDQ+L +++ +P+ ++ A G +G+A+H ++ + +
Sbjct: 97 YDQILS----SRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFV 152
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
Q+ALV Y NCG + ++AR +F++I E DL
Sbjct: 153 QAALVGFYANCGKL-------------------------------REARSLFERIREPDL 181
Query: 316 VCWSAMISGYAES---DQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
W+ +++ YA S D +E L LF MQ+R P+++++++ I +CAN+G + W
Sbjct: 182 ATWNTLLAAYANSEEIDSDEEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWA 238
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H Y KN + V +LID+Y+KCG L A++VF+ M +++V +++MI A+HG+
Sbjct: 239 HVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFG 298
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
+ L+ + + + P+ F+ + ACSH+GLV+EG ++F+SM +GI P+ EHYGC
Sbjct: 299 QEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGC 358
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
+VDL R+ L +A E I+ MP PN +W S + + Q HG+ E GE A K +L LE ++
Sbjct: 359 LVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFEN 418
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASS 591
G V+LSNIYA RW DV R+ M + ++K S
Sbjct: 419 SGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 187/445 (42%), Gaps = 56/445 (12%)
Query: 33 LKQIHAQILRSNPSNXXXXXXXXXXXXXXXXXXXXXXXXXVFSQIPNPDTHFCNQLLR-L 91
LKQIHAQI+ S+ + QIPNP N L+ +
Sbjct: 25 LKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALS---ILRQIPNPSVFLYNTLISSI 81
Query: 92 LSRSPTPQNTLF--LYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLA---SKL 146
+S + Q L LY ++ ++ KAS HG A L
Sbjct: 82 VSNHNSTQTHLAFSLYDQILS-SRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVL 140
Query: 147 GF----HSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYD-- 200
F + D F+Q L+ Y+ C ++ +AR +F+++ D TWN ++ Y S D
Sbjct: 141 KFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSD 200
Query: 201 -QVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSAL 259
+VL L+ M+ +P+ + L ++ +C + G G H +++ N L L+ + ++L
Sbjct: 201 EEVLLLFMRMQV---RPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSL 257
Query: 260 VNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWS 319
+++Y CG + AR+++D++S + + AM+ G A HG
Sbjct: 258 IDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGF-------------------- 297
Query: 320 AMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKN 379
QE ++L+ + + +VPD T + ISAC++ G + + I + K
Sbjct: 298 -----------GQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFN-SMKA 345
Query: 380 GFGRSLSVNN--ALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMHG-YANSA 435
+G V + L+D+ + G L A+E + MP K N W S + + HG +
Sbjct: 346 VYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGE 405
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYA 460
+ L H + E + + +YA
Sbjct: 406 IALKHLLGLEFENSGNYVLLSNIYA 430
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 160/515 (31%), Positives = 259/515 (50%), Gaps = 45/515 (8%)
Query: 146 LGFHSDPFIQTGLIAMYSACR--RIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVL 203
G S+ + T +Y CR + +A +F +M R+ V+W MI G+ + Y + L
Sbjct: 223 FGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREAL 282
Query: 204 KLYEEMK--TSDTKPDGVILCTVLSACGHSG--NLSYGKAIHEFIMDNGLALSAH----- 254
L+ EMK P+G L ++ ACG G G+ +H ++ NG H
Sbjct: 283 MLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLA 342
Query: 255 -------------------------LQSA--LVNMYVNCGAMDLARELYDKLSSKHLVVS 287
LQS ++N Y+ G ++ A L++++ S H VS
Sbjct: 343 KSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVS 402
Query: 288 -TAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI 346
T+M+ GY + G V A +F ++ +KD V W+ MISG +++ EA L ++M +
Sbjct: 403 WTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGL 462
Query: 347 VPDQITMLSAISACANVGALAQARWIHTYADKNG--FGRSLSVNNALIDMYAKCGNLIRA 404
P T +S+ L Q + IH K + L + N+L+ MYAKCG + A
Sbjct: 463 KPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDA 522
Query: 405 KEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHA 464
E+F M +K+ +SW+SMI + HG A+ A+NLF M + +PN V F+GVL ACSH+
Sbjct: 523 YEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHS 582
Query: 465 GLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGS 524
GL+ G +LF +M + I P +HY M+DL RA L++A E I ++PF P+ ++G+
Sbjct: 583 GLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGA 642
Query: 525 LMSACQVHGEVE----LGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMA 580
L+ C ++ + + E AA ++LEL+P + V L N+YA R + +R+ M
Sbjct: 643 LLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMG 702
Query: 581 NKGISKEKASSRVEINNEVHVFMMADRYHKQSREI 615
KG+ K S V +N +VF+ D+ ++ ++
Sbjct: 703 IKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 181/374 (48%), Gaps = 51/374 (13%)
Query: 158 LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPD 217
++ Y CRR+ +A +F +M ++ V+W +M+ C G + ++L++EM +
Sbjct: 114 MLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNV--- 169
Query: 218 GVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYD 277
V T+++ +G++ K + + + + +A++ Y+ M+ A+ L+
Sbjct: 170 -VSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVS----WNAMIKGYIENDGMEEAKLLFG 224
Query: 278 KLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKL 337
+S K++V T+M+ GY ++G V++A +F ++ E+++V W+AMISG+A ++ +EAL L
Sbjct: 225 DMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALML 284
Query: 338 FNEMQ--LRNIVPDQITMLSAISACANVGALAQ--ARWIHTYADKNGF------GR---- 383
F EM+ + + P+ T++S AC +G + +H NG+ GR
Sbjct: 285 FLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKS 344
Query: 384 ----------------------SLSVNNALIDMYAKCGNLIRAKEVFENMPR-KNVISWS 420
L N +I+ Y K G+L RA+ +FE + + +SW+
Sbjct: 345 LVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWT 404
Query: 421 SMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINE 480
SMI+ + G + A LF ++ ++D GV + ++ L E L S M+
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLHDKD----GVTWTVMISGLVQNELFAEAASLLSDMV-R 459
Query: 481 HGIAPRHEHYGCMV 494
G+ P + Y ++
Sbjct: 460 CGLKPLNSTYSVLL 473
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 168/366 (45%), Gaps = 60/366 (16%)
Query: 168 IMDARLVFDKMSHRDAVT----WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCT 223
++ AR + DK+ R ++ W ++ Y ++G D+ L+E M + ++ C
Sbjct: 58 LVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERN-----IVTCN 112
Query: 224 VLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKH 283
+ +G + + + + + + + ++ + G + A EL+D++ ++
Sbjct: 113 AM----LTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERN 168
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL 343
+V +++G ++G ++ A+ +FD + +D+V W+AMI GY E+D +EA LF +M
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSE 228
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR 403
+N+V W +++ Y + G++
Sbjct: 229 KNVVT----------------------W-----------------TSMVYGYCRYGDVRE 249
Query: 404 AKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE--EDIEPNGVIFIGVLYAC 461
A +F MP +N++SW++MI+ FA + A+ LF MK+ + + PNG I + YAC
Sbjct: 250 AYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Query: 462 SHAGL--VEEGQKLFSSMINEHGIAPRHEHY--GCMVDLYCRANLLRKAMELI-ESMPF- 515
G+ G++L + +I+ H+ +V +Y + L+ A L+ ES
Sbjct: 310 GGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQ 369
Query: 516 APNVII 521
+ N+II
Sbjct: 370 SCNIII 375
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 159/325 (48%), Gaps = 35/325 (10%)
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ AL+ ++ G + AR L DK+ + +V T++LS YAK G + +AR +F+ +
Sbjct: 45 EEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP 104
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
E+++V +AM++GY + + EA LF EM +N+V + ML+A+ C + +
Sbjct: 105 ERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTV-MLTAL--CDDGRSEDAVEL 160
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
++N + N L+ + G++ +AK+VF+ MP ++V+SW++MI + +
Sbjct: 161 FDEMPERN-----VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDG 215
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
A LF M E+++ V + ++Y G V E +LF M + ++ +
Sbjct: 216 MEEAKLLFGDMSEKNV----VTWTSMVYGYCRYGDVREAYRLFCEMPERNIVS-----WT 266
Query: 492 CMVDLYCRANLLRKAMELIESM-----PFAPNVIIWGSLMSACQVHGEVE---LGEFAAK 543
M+ + L R+A+ L M +PN SL AC G VE LGE
Sbjct: 267 AMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLG-VEFRRLGEQLHA 325
Query: 544 QILE---LEPDHDGALV-VLSNIYA 564
Q++ DHDG L L ++YA
Sbjct: 326 QVISNGWETVDHDGRLAKSLVHMYA 350
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 229/411 (55%), Gaps = 3/411 (0%)
Query: 184 VTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKP-DGVILCTVLSACGHSGNLSYGKAIHE 242
++ + Y GN++Q L L+ +M +S P D + L +C + G ++H
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 243 FIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKD 302
+ + + + AL++MY C ++ AR+L+D++ ++ VV AM+S Y G VK+
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 303 ARFIFDQI-VEKDLVCWSAMISGYAES-DQPQEALKLFNEMQLRNIVPDQITMLSAISAC 360
A +++ + V + ++A+I G + D A++ + +M P+ IT+L+ +SAC
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 361 ANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWS 420
+ +GA + IH+YA +N + + L++ Y +CG+++ + VF++M ++V++WS
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS 252
Query: 421 SMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINE 480
S+I+A+A+HG A SA+ F M+ + P+ + F+ VL ACSHAGL +E F M +
Sbjct: 253 SLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGD 312
Query: 481 HGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEF 540
+G+ +HY C+VD+ R +A ++I++MP P WG+L+ AC+ +GE+EL E
Sbjct: 313 YGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEI 372
Query: 541 AAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASS 591
AA+++L +EP++ V+L IY R + +R M G+ SS
Sbjct: 373 AARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 167/396 (42%), Gaps = 72/396 (18%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
K+ + A LG +H + K F S+PF+ L+ MY C + AR +FD++ R+AV
Sbjct: 56 KSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAV 115
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMK-----------------TSDT------------- 214
WN MI Y G + ++LYE M T D
Sbjct: 116 VWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIE 175
Query: 215 ---KPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDL 271
KP+ + L ++SAC G K IH + N + L+S LV Y CG++
Sbjct: 176 FRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVY 235
Query: 272 ARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQP 331
+ ++D + + +V ++++S YA HG DA
Sbjct: 236 VQLVFDSMEDRDVVAWSSLISAYALHG---DA---------------------------- 264
Query: 332 QEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVN--N 389
+ ALK F EM+L + PD I L+ + AC++ G LA ++ + +G S + +
Sbjct: 265 ESALKTFQEMELAKVTPDDIAFLNVLKACSHAG-LADEALVYFKRMQGDYGLRASKDHYS 323
Query: 390 ALIDMYAKCGNLIRAKEVFENMPRK-NVISWSSMINAFAMHGYANSA-MNLFHRMKEEDI 447
L+D+ ++ G A +V + MP K +W +++ A +G A + + E
Sbjct: 324 CLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPE 383
Query: 448 EPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
P + +G +Y G EE ++L M E G+
Sbjct: 384 NPANYVLLGKIYM--SVGRQEEAERLRLKM-KESGV 416
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 205/351 (58%), Gaps = 5/351 (1%)
Query: 248 GLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIF 307
G ++Q+ALV MY+ G M A +++D++ ++ V M++G G + A
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEM-QLRNIVPDQITMLSAISACANVGAL 366
+++ + +V W+ +I GYA D+P+EA+ LF+ M I P++IT+L+ + A N+G L
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 367 AQARWIHTYADKNGFGR-SLSVNNALIDMYAKCGNLIRAKEVFENMP--RKNVISWSSMI 423
+H Y K GF + V N+LID YAKCG + A + F +P RKN++SW++MI
Sbjct: 273 KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMI 332
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEG-QKLFSSMINEHG 482
+AFA+HG A+++F M+ ++PN V I VL ACSH GL EE + F++M+NE+
Sbjct: 333 SAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYK 392
Query: 483 IAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAA 542
I P +HYGC+VD+ R L +A ++ +P ++W L+ AC V+ + EL E
Sbjct: 393 ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVT 452
Query: 543 KQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRV 593
++++ELE H G V++SNI+ R+ D R+ M +G++K S+V
Sbjct: 453 RKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 181/409 (44%), Gaps = 82/409 (20%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVS-----KASA------LY 134
N LLR S TP + FLY +L+R+ + + KAS+ L
Sbjct: 81 NPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLL 140
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
LG+ +HGL KLGF S ++QT L+ MY ++DA VFD+M R+ VTWN+MI G
Sbjct: 141 LGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLT 200
Query: 195 QSGNYDQVLKLYEEMKTSDT--------------------------------KPDGVILC 222
G++++ L E+M KP+ + +
Sbjct: 201 NLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITIL 260
Query: 223 TVLSACGHSGNLSYGKAIHEFIMDNGLA-LSAHLQSALVNMYVNCGAMDLARELYDKLSS 281
+L A + G+L ++H ++ G + ++L++ Y CG + A + + ++ +
Sbjct: 261 AILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPN 320
Query: 282 --KHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFN 339
K+LV T M+S +A HGM K EA+ +F
Sbjct: 321 GRKNLVSWTTMISAFAIHGMGK-------------------------------EAVSMFK 349
Query: 340 EMQLRNIVPDQITMLSAISACANVGALAQARWI---HTYADKNGFGRSLSVNNALIDMYA 396
+M+ + P+++TM+S ++AC++ G LA+ ++ +T ++ + L+DM
Sbjct: 350 DMERLGLKPNRVTMISVLNACSH-GGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLR 408
Query: 397 KCGNLIRAKEVFENMP-RKNVISWSSMINAFAMHGYANSAMNLFHRMKE 444
+ G L A+++ +P + + W ++ A +++ A A + ++ E
Sbjct: 409 RKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLME 457
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/524 (29%), Positives = 249/524 (47%), Gaps = 36/524 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++P P+ N L+ +P+ FL +++R G KA S
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGSPRALEFLV-RMQREGLVLDGFALPCGLKACSFGGL 253
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVF--DKMSHRDAV-TWNIM 189
L +G ++H K G S PF + LI MYS C ++ A VF +K++ +V WN M
Sbjct: 254 LTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 190 IDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGL 249
+ G+ + + L L ++ SD D L L C + NL G +H ++ +G
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY 373
Query: 250 ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQ 309
L + S LV+++ N G + A +L+ +L +K ++ + ++ G K G F+
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSG--------FNS 425
Query: 310 IVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
+ A LF E+ + DQ + + + C+++ +L
Sbjct: 426 L-----------------------AFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWG 462
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
+ IH K G+ AL+DMY KCG + +F+ M ++V+SW+ +I F +
Sbjct: 463 KQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQN 522
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
G A FH+M IEPN V F+G+L AC H+GL+EE + +M +E+G+ P EH
Sbjct: 523 GRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEH 582
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
Y C+VDL +A L ++A ELI MP P+ IW SL++AC H L A+++L+
Sbjct: 583 YYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGF 642
Query: 550 PDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRV 593
PD LSN YA W+ + +R++ G +KE S +
Sbjct: 643 PDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 212/439 (48%), Gaps = 9/439 (2%)
Query: 128 SKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWN 187
K A G I K G + FI +I+MY R + DA VFD+MS R+ VTW
Sbjct: 16 GKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWT 75
Query: 188 IMIDGYCQSGNYDQVLKLYEEMKTSDTK-PDGVILCTVLSACGHSGNLSYGKAIHEFIMD 246
M+ GY G ++ ++LY M S+ + + + VL ACG G++ G ++E I
Sbjct: 76 TMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGK 135
Query: 247 NGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFI 306
L L +++V+MYV G + A + ++ ++SGY K G++ +A +
Sbjct: 136 ENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTL 195
Query: 307 FDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGAL 366
F ++ + ++V W+ +ISG+ + P+ AL+ MQ +V D + + AC+ G L
Sbjct: 196 FHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLL 254
Query: 367 AQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFEN---MPRKNVISWSSMI 423
+ +H K+G S +ALIDMY+ CG+LI A +VF +V W+SM+
Sbjct: 255 TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
+ F ++ +A+ L ++ + D+ + G L C + + G ++ S++ G
Sbjct: 315 SGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV-HSLVVVSGY 373
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAK 543
+ +VDL+ ++ A +L +P ++I + L+ C G L + +
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFYLFR 432
Query: 544 QILELEPDHDGALVVLSNI 562
++++L D D +V SNI
Sbjct: 433 ELIKLGLDADQFIV--SNI 449
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 187/444 (42%), Gaps = 64/444 (14%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
KA + LG+ ++ K D + ++ MY R+++A F ++ +
Sbjct: 115 KACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSST 174
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKP---------------------------- 216
+WN +I GYC++G D+ + L+ M +
Sbjct: 175 SWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGL 234
Query: 217 --DGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARE 274
DG L L AC G L+ GK +H ++ +GL S SAL++MY NCG++ A +
Sbjct: 235 VLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAAD 294
Query: 275 LY--DKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQ 332
++ +KL+ V + W++M+SG+ +++ +
Sbjct: 295 VFHQEKLA------------------------------VNSSVAVWNSMLSGFLINEENE 324
Query: 333 EALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALI 392
AL L ++ ++ D T+ A+ C N L +H+ +G+ V + L+
Sbjct: 325 AALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILV 384
Query: 393 DMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGV 452
D++A GN+ A ++F +P K++I++S +I G+ + A LF + + ++ +
Sbjct: 385 DLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQF 444
Query: 453 IFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIES 512
I +L CS + G+++ I + G +VD+Y + + + L +
Sbjct: 445 IVSNILKVCSSLASLGWGKQIHGLCIKK-GYESEPVTATALVDMYVKCGEIDNGVVLFDG 503
Query: 513 MPFAPNVIIWGSLMSACQVHGEVE 536
M +V+ W ++ +G VE
Sbjct: 504 M-LERDVVSWTGIIVGFGQNGRVE 526
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 151/330 (45%), Gaps = 13/330 (3%)
Query: 225 LSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL 284
L CG G++I ++ G++ + + + +++MYV+ + A +++D++S +++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 285 VVSTAMLSGYAKHGMVKDARFIFDQIVEKD-----LVCWSAMISGYAESDQPQEALKLFN 339
V T M+SGY G A ++ ++++ + +SA++ Q + ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 340 EMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCG 399
+ N+ D + M S + G L +A + K S + N LI Y K G
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEA----NSSFKEILRPSSTSWNTLISGYCKAG 187
Query: 400 NLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLY 459
+ A +F MP+ NV+SW+ +I+ F G + A+ RM+ E + +G L
Sbjct: 188 LMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLK 246
Query: 460 ACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPN- 518
ACS GL+ G++L ++ + G+ ++D+Y L A ++ A N
Sbjct: 247 ACSFGGLLTMGKQLHCCVV-KSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 519 -VIIWGSLMSACQVHGEVELGEFAAKQILE 547
V +W S++S ++ E E + QI +
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQ 335
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 32/229 (13%)
Query: 346 IVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAK 405
+V D + + + C V A + I + K G +++ + N +I MY L A
Sbjct: 1 MVMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAH 60
Query: 406 EVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIE-PNGVIFIGVLYACSHA 464
+VF+ M +N+++W++M++ + G N A+ L+ RM + + E N ++ VL AC
Sbjct: 61 KVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLV 120
Query: 465 GLVEEGQKLFSSMINEH------------------------------GIAPRHEHYGCMV 494
G ++ G ++ + E+ + P + ++
Sbjct: 121 GDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLI 180
Query: 495 DLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAK 543
YC+A L+ +A+ L MP PNV+ W L+S G EF +
Sbjct: 181 SGYCKAGLMDEAVTLFHRMP-QPNVVSWNCLISGFVDKGSPRALEFLVR 228
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 150/527 (28%), Positives = 263/527 (49%), Gaps = 45/527 (8%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++P D N L RS P +TL L+ ++ R A S S
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
G ++H L K G + +T LI MYS ++D+ VF+ + +D V+WN ++ G
Sbjct: 100 PETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSG 159
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
+ ++G + L ++ M + L +V+ C L GK +H ++ G
Sbjct: 160 FLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG---- 215
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI-V 311
R+L +V+ TAM+S Y+ G++ +A +++ + V
Sbjct: 216 --------------------RDL--------VVLGTAMISFYSSVGLINEAMKVYNSLNV 247
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
D V +++ISG + +EA L + + P+ + S+++ C++ L +
Sbjct: 248 HTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQ 302
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
IH A +NGF + N L+DMY KCG +++A+ +F +P K+V+SW+SMI+A+A++G
Sbjct: 303 IHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGD 362
Query: 432 ANSAMNLFHRMKEE--DIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
A+ +F M EE + PN V F+ V+ AC+HAGLV+EG++ F M ++ + P EH
Sbjct: 363 GVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEH 422
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPN----VIIWGSLMSACQVHGEVELGEFAAKQI 545
Y C +D+ +A + L+E M N IW +++SAC ++ ++ GE+ A+++
Sbjct: 423 YVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRL 482
Query: 546 L-ELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASS 591
+ E P++ V++SN YA +W+ V +R + NKG+ K S
Sbjct: 483 MEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 125/255 (49%), Gaps = 15/255 (5%)
Query: 279 LSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLF 338
+ S +LV+ + +A H A +FD++ ++DL ++ +S + S P + L LF
Sbjct: 18 VKSTNLVLRCVFIRNFATH-----ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF 72
Query: 339 NEMQLRNIVPD--QITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYA 396
+Q+ PD T + AC+ + R +H K G ALIDMY+
Sbjct: 73 --LQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYS 130
Query: 397 KCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIG 456
K G+L+ + VFE++ K+++SW+++++ F +G A+ +F M E +E +
Sbjct: 131 KYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSS 190
Query: 457 VLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY--GCMVDLYCRANLLRKAMELIESMP 514
V+ C+ ++++G+++ + ++ + R M+ Y L+ +AM++ S+
Sbjct: 191 VVKTCASLKILQQGKQVHAMVV----VTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 515 FAPNVIIWGSLMSAC 529
+ ++ SL+S C
Sbjct: 247 VHTDEVMLNSLISGC 261
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/571 (26%), Positives = 274/571 (47%), Gaps = 45/571 (7%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKL-RRVGXXXXXXXXXXXXKAVSKAS 131
+F ++ D + ++R +S P L L++++ KA +
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 132 ALYLGLEIHGLASKLGFH-SDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMI 190
+ +G +HG + + GF +D F+ LI MYS + A VFD+ + R+ V+WN ++
Sbjct: 241 DIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
G+ + YD+ L+++ M + D V + ++L C K+IH I+ G
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE 360
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+ S+L++ Y +C +V DA + D +
Sbjct: 361 SNEVALSSLIDAYTSCS-------------------------------LVDDAGTVLDSM 389
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR 370
KD+V S MISG A + + EA+ +F M+ P+ IT++S ++AC+ L ++
Sbjct: 390 TYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSK 446
Query: 371 WIHTYADKNGFG-RSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
W H A + +SV +++D YAKCG + A+ F+ + KN+ISW+ +I+A+A++
Sbjct: 447 WAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAIN 506
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
G + A+ LF MK++ PN V ++ L AC+H GLV++G +F SM+ E P +H
Sbjct: 507 GLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH-KPSLQH 565
Query: 490 YGCMVDLYCRANLLRKAMELIESMP--FAPNVIIWGSLMSACQVH-GEVELGEFAAKQIL 546
Y C+VD+ RA + A+ELI+++P WG+++S C+ ++ + ++L
Sbjct: 566 YSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL 625
Query: 547 ELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMAD 606
ELEP ++ S+ +A E+ W DV ++R+ + + + S V N F+ D
Sbjct: 626 ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGD 685
Query: 607 RYHKQSREIYKKLEEVVSELKLVSYTPSTSG 637
+ + E L +VV L T+G
Sbjct: 686 KLSQSDSE----LNDVVQSLHRCMKLDDTAG 712
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 212/466 (45%), Gaps = 57/466 (12%)
Query: 161 MYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVI 220
Y C + FD M+ RD+V+WN+++ G G ++ L + +++ +P+
Sbjct: 70 FYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTST 129
Query: 221 LCTVLSACGHSGNLSY-GKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL 279
L V+ AC +L + G+ IH +++ +G + +Q++++ MY + D L
Sbjct: 130 LVLVIHACR---SLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADS----------DSL 176
Query: 280 SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFN 339
S AR +FD++ E+D++ WS +I Y +S +P LKLF
Sbjct: 177 S----------------------ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFK 214
Query: 340 EM-QLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRS-LSVNNALIDMYAK 397
EM PD +T+ S + AC + + R +H ++ + GF + + V N+LIDMY+K
Sbjct: 215 EMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSK 274
Query: 398 CGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGV 457
++ A VF+ +N++SW+S++ F + + A+ +FH M +E +E + V + +
Sbjct: 275 GFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSL 334
Query: 458 LYACSHAGLVEEGQ--KLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPF 515
L C E+ K +I G ++D Y +L+ A +++SM +
Sbjct: 335 LRVCK---FFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTY 391
Query: 516 APNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYA-------KERR 568
+V+ +++S G + A I D A+ V+S + A + +
Sbjct: 392 -KDVVSCSTMISGLAHAGRSD----EAISIFCHMRDTPNAITVISLLNACSVSADLRTSK 446
Query: 569 WNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSRE 614
W IR+S+A IS +S V+ + MA R Q E
Sbjct: 447 WAHGIAIRRSLAINDIS--VGTSIVDAYAKCGAIEMARRTFDQITE 490
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 43/239 (17%)
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
W ++SGY+E Q A FN+ + IV ACA + L Q
Sbjct: 25 WREVVSGYSE---IQRAGVQFNDPFVFPIV---------FKACAKLSWLFQG-------- 64
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
N++ D Y KCG+L F+ M ++ +SW+ ++ +G+ +
Sbjct: 65 -----------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 113
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH--GIAPRHEHYGCMVD 495
F +++ EPN + V++AC L +G+K+ +I GI+ CM
Sbjct: 114 WFSKLRVWGFEPNTSTLVLVIHACR--SLWFDGEKIHGYVIRSGFCGISSVQNSILCM-- 169
Query: 496 LYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQIL---ELEPD 551
Y ++ L A +L + M +VI W ++ + E +G K+++ + EPD
Sbjct: 170 -YADSDSL-SARKLFDEMS-ERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPD 225
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 233/453 (51%), Gaps = 56/453 (12%)
Query: 158 LIAMYSACRRIMDARLVFDKMSH---------------RDAVTWNIMIDGYCQSGNYDQV 202
LI Y ++ AR +FD++ ++ V+WN MI Y + G+
Sbjct: 241 LIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSA 300
Query: 203 LKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNM 262
L+++MK DT +S+ + +++
Sbjct: 301 RLLFDQMKDRDT-------------------ISW--------------------NTMIDG 321
Query: 263 YVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMI 322
YV+ M+ A L+ ++ ++ M+SGYA G V+ AR F++ EK V W+++I
Sbjct: 322 YVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSII 381
Query: 323 SGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFG 382
+ Y ++ +EA+ LF M + PD T+ S +SA + L +H K
Sbjct: 382 AAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP 441
Query: 383 RSLSVNNALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMHGYANSAMNLFHR 441
+ V+NALI MY++CG ++ ++ +F+ M ++ VI+W++MI +A HG A+ A+NLF
Sbjct: 442 -DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGS 500
Query: 442 MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRAN 501
MK I P+ + F+ VL AC+HAGLV+E + F SM++ + I P+ EHY +V++
Sbjct: 501 MKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQG 560
Query: 502 LLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSN 561
+AM +I SMPF P+ +WG+L+ AC+++ V L AA+ + LEP+ V+L N
Sbjct: 561 QFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYN 620
Query: 562 IYAKERRWNDVGLIRQSMANKGISKEKASSRVE 594
+YA W++ +R +M +K I KE+ SS V+
Sbjct: 621 MYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 190/435 (43%), Gaps = 76/435 (17%)
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMK 210
D F +I+ Y+ RRI +A L+F+KM R+AV+W+ MI G+CQ+G D + L+ +M
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP 194
Query: 211 TSDTKPDGVILCTVLSACGHSGNLS--------YGKAIHEFIMDNGLALSAHLQSALVNM 262
D+ P LC +++ + LS YG + +G + + L+
Sbjct: 195 VKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLV------SGREDLVYAYNTLIVG 244
Query: 263 YVNCGAMDLARELYDKLSS---------------KHLVVSTAMLSGYAKHGMVKDARFIF 307
Y G ++ AR L+D++ K++V +M+ Y K G V AR +F
Sbjct: 245 YGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLF 304
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
DQ+ ++D + W+ MI GY + ++A LF+EM R+
Sbjct: 305 DQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRD---------------------- 342
Query: 368 QARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFA 427
H++ N ++ YA GN+ A+ FE P K+ +SW+S+I A+
Sbjct: 343 ----AHSW-------------NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYE 385
Query: 428 MHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
+ A++LF RM E +P+ +L A + GLV + I + P
Sbjct: 386 KNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNLRLGMQMHQIVVKTVIPDV 443
Query: 488 EHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE--LGEFAAKQI 545
+ ++ +Y R + ++ + + M VI W +++ HG L F + +
Sbjct: 444 PVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKS 503
Query: 546 LELEPDHDGALVVLS 560
+ P H + VL+
Sbjct: 504 NGIYPSHITFVSVLN 518
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 181/409 (44%), Gaps = 89/409 (21%)
Query: 146 LGFHS-----DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYD 200
LGF + + I++G IA +AR +F+K+ R+ VTWN MI GY + +
Sbjct: 38 LGFRATNKELNQMIRSGYIA---------EARDIFEKLEARNTVTWNTMISGYVKRREMN 88
Query: 201 QVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALV 260
Q KL++ M K D V T++S
Sbjct: 89 QARKLFDVMP----KRDVVTWNTMISG--------------------------------- 111
Query: 261 NMYVNCGA---MDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC 317
YV+CG ++ AR+L+D++ S+ M+SGYAK+ + +A +F+++ E++ V
Sbjct: 112 --YVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVS 169
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
WSAMI+G+ ++ + A+ LF +M +++ P + + ++ L++A W+
Sbjct: 170 WSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYG 225
Query: 378 KNGFGRS--LSVNNALIDMYAKCGNLIRAKEVFENMPR---------------KNVISWS 420
GR + N LI Y + G + A+ +F+ +P KNV+SW+
Sbjct: 226 SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 421 SMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINE 480
SMI A+ G SA LF +MK+ D + G + H +E+ LFS M N
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYV----HVSRMEDAFALFSEMPN- 340
Query: 481 HGIAPRHEH-YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSA 528
R H + MV Y + A E P + + W S+++A
Sbjct: 341 -----RDAHSWNMMVSGYASVGNVELARHYFEKTP-EKHTVSWNSIIAA 383
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 166/382 (43%), Gaps = 56/382 (14%)
Query: 140 HGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNY 199
HG + F + +I Y ++ ARL+FD+M RD ++WN MIDGY
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRM 328
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSA-------------------------CGHSGNL 234
+ L+ EM D +++ S + N
Sbjct: 329 EDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNK 388
Query: 235 SYGKAIHEFIMDN--GLALSAHLQSALVNMYVNCGAMDLARELYD---KLSSKHLVVSTA 289
Y +A+ FI N G H ++L++ + L +++ K + V A
Sbjct: 389 DYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNA 448
Query: 290 MLSGYAKHGMVKDARFIFDQI-VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVP 348
+++ Y++ G + ++R IFD++ ++++++ W+AMI GYA EAL LF M+ I P
Sbjct: 449 LITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYP 508
Query: 349 DQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSV---------NNALIDMYAKCG 399
IT +S ++ACA+ G + +A K F +SV ++L+++ + G
Sbjct: 509 SHITFVSVLNACAHAGLVDEA--------KAQFVSMMSVYKIEPQMEHYSSLVNVTSGQG 560
Query: 400 NLIRAKEVFENMP-RKNVISWSSMINAFAMH---GYANSAMNLFHRMKEEDIEPNGVIFI 455
A + +MP + W ++++A ++ G A+ A R++ E P + +
Sbjct: 561 QFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTP--YVLL 618
Query: 456 GVLYACSHAGLVEEGQKLFSSM 477
+YA GL +E ++ +M
Sbjct: 619 YNMYA--DMGLWDEASQVRMNM 638
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 221/422 (52%), Gaps = 13/422 (3%)
Query: 187 NIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDG-----VILCTVLSACGHSGNLSYGKAIH 241
N + Y S + Q L Y ++ PD +I C + C SG + +G+AI
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVK 301
+G +Q++L++MY CGA+DLA++L+ ++ + +V ++++G ++G V
Sbjct: 147 -----HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL 201
Query: 302 DARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACA 361
A +FD++ +K+++ W+ MIS Y ++ P ++ LF EM ++ T++ ++AC
Sbjct: 202 AAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 261
Query: 362 NVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSS 421
L + R +H + S+ ++ ALIDMY KC + A+ +F+++ +N ++W+
Sbjct: 262 RSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNV 321
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
MI A +HG + LF M + P+ V F+GVL C+ AGLV +GQ +S M++E
Sbjct: 322 MILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEF 381
Query: 482 GIAPRHEHYGCMVDLYCRANLLRKAMELIESMP---FAPNVIIWGSLMSACQVHGEVELG 538
I P H CM +LY A +A E ++++P P W +L+S+ + G LG
Sbjct: 382 QIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLG 441
Query: 539 EFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNE 598
E AK ++E +P + +L NIY+ RW DV +R+ + + I + V++
Sbjct: 442 ESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEI 501
Query: 599 VH 600
VH
Sbjct: 502 VH 503
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 160/401 (39%), Gaps = 75/401 (18%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N + + S +P+ L Y + R G + K + G HG A K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 146 LGFHSDPFIQTGLIAMYSAC--------------RR-----------------IMDARLV 174
G +Q L+ MY+ C +R ++ A +
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 175 FDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNL 234
FD+M ++ ++WNIMI Y + N + L+ EM + + + L +L+ACG S L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 235 SYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGY 294
G+++H ++ L S + +AL++MY C + LAR ++D LS ++ V
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVT-------- 318
Query: 295 AKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITML 354
W+ MI + +P+ L+LF M + PD++T +
Sbjct: 319 -----------------------WNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 355 SAISACANVGALAQAR-----WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFE 409
+ CA G ++Q + + + K FG + N +Y+ G A+E +
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMAN----LYSSAGFPEEAEEALK 411
Query: 410 NMPRKNV----ISWSSMINAFAMHGYANSAMNLFHRMKEED 446
N+P ++V W++++++ G ++ + E D
Sbjct: 412 NLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETD 452
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++P+ + N ++ + P ++ L++++ R G A +++
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L G +H + +S I T LI MY C+ + AR +FD +S R+ VTWN+MI
Sbjct: 266 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 325
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN-GLAL 251
+C G + L+L+E M +PD V VL C +G +S G++ + ++D +
Sbjct: 326 HCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKP 385
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLV 285
+ Q + N+Y + G + A E L + +
Sbjct: 386 NFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVT 419
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
L C + + Y S P++AL + ++ VPD T +S IS + + H
Sbjct: 83 LYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHG 142
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
A K+G + L V N+L+ MY CG L AK++F +P+++++SW+S+I +G +
Sbjct: 143 QAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLA 202
Query: 435 AMNLFHRMKEEDI-------------------------------EPNGVIFIGVLYACSH 463
A LF M +++I + N + +L AC
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWG 523
+ ++EG+ + +S+I + ++D+Y + + A + +S+ N + W
Sbjct: 263 SARLKEGRSVHASLIRTF-LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR-NKVTWN 320
Query: 524 SLMSACQVHGEVELG 538
++ A +HG E G
Sbjct: 321 VMILAHCLHGRPEGG 335
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 237/506 (46%), Gaps = 64/506 (12%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF +I NP N ++R + ++ K+ + A S++ A
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLA 278
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDK--------------- 177
L +G IH +A KL +D + T + MY C R+ AR VFD+
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSG 338
Query: 178 ----------------MSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVIL 221
M R+ V+WN M+ GY + +D+ L M+ D V L
Sbjct: 339 YAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTL 398
Query: 222 CTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSS 281
+L+ C ++ GK H FI +G YD
Sbjct: 399 VWILNVCSGISDVQMGKQAHGFIYRHG---------------------------YDT--- 428
Query: 282 KHLVVSTAMLSGYAKHGMVKDARFIFDQIVE-KDLVCWSAMISGYAESDQPQEALKLFNE 340
+++V+ A+L Y K G ++ A F Q+ E +D V W+A+++G A + ++AL F
Sbjct: 429 -NVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEG 487
Query: 341 MQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGN 400
MQ+ P + T+ + ++ CAN+ AL + IH + ++G+ + + A++DMY+KC
Sbjct: 488 MQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRC 546
Query: 401 LIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYA 460
A EVF+ +++I W+S+I +G + LF ++ E ++P+ V F+G+L A
Sbjct: 547 FDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQA 606
Query: 461 CSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVI 520
C G VE G + FSSM ++ I+P+ EHY CM++LYC+ L + E + MPF P +
Sbjct: 607 CIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQ 666
Query: 521 IWGSLMSACQVHGEVELGEFAAKQIL 546
+ + ACQ + +LG +AAK+++
Sbjct: 667 MLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 248/499 (49%), Gaps = 24/499 (4%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++P D N ++ +++ +++++ R G K+
Sbjct: 118 LFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILD 177
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L L ++H K G+ + ++T ++ +Y CR + DAR VFD++ + V+WN+++
Sbjct: 178 LRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRR 237
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y + G D+ + ++ +M + +P + +V+ AC S L GK IH + +
Sbjct: 238 YLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVAD 297
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+ +++ +MYV C ++ AR ++D+ SK L T+ +SGYA G+ ++AR +FD + E
Sbjct: 298 TVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEM--QLRNIVPDQITMLSAISACANVGALAQAR 370
+++V W+AM+ GY + + EAL M ++ NI D +T++ ++ C+ + + +
Sbjct: 358 RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI--DNVTLVWILNVCSGISDVQMGK 415
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR-KNVISWSSMINAFAMH 429
H + ++G+ ++ V NAL+DMY KCG L A F M ++ +SW++++ A
Sbjct: 416 QAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARV 475
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
G + A++ F M+ E +P+ +L C++ + G+ + +I + G
Sbjct: 476 GRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRD-GYKIDVVI 533
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILEL- 548
G MVD+Y + A+E+ + ++I+W S++ C +G +K++ EL
Sbjct: 534 RGAMVDMYSKCRCFDYAIEVFKEAA-TRDLILWNSIIRGCCRNGR-------SKEVFELF 585
Query: 549 --------EPDHDGALVVL 559
+PDH L +L
Sbjct: 586 MLLENEGVKPDHVTFLGIL 604
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 176/437 (40%), Gaps = 78/437 (17%)
Query: 153 FIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTS 212
F+ I Y C + DAR +F++M RD +WN +I Q+G D+V +++ M
Sbjct: 97 FLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD 156
Query: 213 DTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLA 272
+ VL +CG +L + +H ++ G + + L++++V++Y C M
Sbjct: 157 GVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVM--- 213
Query: 273 RELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQ 332
DAR +FD+IV V W+ ++ Y E
Sbjct: 214 ----------------------------SDARRVFDEIVNPSDVSWNVIVRRYLEMGFND 245
Query: 333 EALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALI 392
EA+ +F +M N+ P T+ S + AC+ AL + IH A K V+ ++
Sbjct: 246 EAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVF 305
Query: 393 DMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDI----- 447
DMY KC L A+ VF+ K++ SW+S ++ +AM G A LF M E +I
Sbjct: 306 DMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNA 365
Query: 448 --------------------------EPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
+ V + +L CS V+ G++ H
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ-------AH 418
Query: 482 GIAPRHEH------YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEV 535
G RH + ++D+Y + L+ A M + + W +L++ G
Sbjct: 419 GFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRS 478
Query: 536 E--LGEFAAKQILELEP 550
E L F Q+ E +P
Sbjct: 479 EQALSFFEGMQV-EAKP 494
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 140/299 (46%), Gaps = 17/299 (5%)
Query: 291 LSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQ 350
+ Y K G V DAR +F+++ E+D W+A+I+ A++ E ++F M + +
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 351 ITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFEN 410
+ + +C + L R +H K G+ ++ + +++D+Y KC + A+ VF+
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDE 222
Query: 411 MPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEG 470
+ + +SW+ ++ + G+ + A+ +F +M E ++ P V+ ACS + +E G
Sbjct: 223 IVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
Query: 471 QKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQ 530
K+ ++ + + + D+Y + + L A + + + ++ W S MS
Sbjct: 283 -KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTR-SKDLKSWTSAMSGYA 340
Query: 531 VHGEVELGEFAAKQILELEPDHDGALVVLSNI----YAKERRWND----VGLIRQSMAN 581
+ G A+++ +L P+ + +V N Y W++ + L+RQ + N
Sbjct: 341 MSGLTR----EARELFDLMPERN---IVSWNAMLGGYVHAHEWDEALDFLTLMRQEIEN 392
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 203/340 (59%), Gaps = 7/340 (2%)
Query: 156 TGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTK 215
T +I ++ + + +AR FD+M + V+WN M+ GY Q+G + L+L+ +M +
Sbjct: 202 TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVR 261
Query: 216 PDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAREL 275
P+ V+SAC + S +++ + I + + L+ +++AL++M+ C + AR +
Sbjct: 262 PNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 276 YDKLSS-KHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEA 334
+++L + ++LV AM+SGY + G + AR +FD + ++++V W+++I+GYA + Q A
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALA 381
Query: 335 LKLFNEM-QLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALID 393
++ F +M + PD++TM+S +SAC ++ L I Y KN + S +LI
Sbjct: 382 IEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIF 441
Query: 394 MYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVI 453
MYA+ GNL AK VF+ M ++V+S++++ AFA +G +NL +MK+E IEP+ V
Sbjct: 442 MYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVT 501
Query: 454 FIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCM 493
+ VL AC+ AGL++EGQ++F S+ N P +HY CM
Sbjct: 502 YTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM 536
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 224/493 (45%), Gaps = 79/493 (16%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMD----ARLVFDKMSHRDAVTWNIMIDGY 193
+IH A + F+S P + S C R+ RL+FD ++ + N M +
Sbjct: 24 QIH--AQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYF 81
Query: 194 CQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
+ + VL+LYE+ PD V+ + G +G + G
Sbjct: 82 SKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR-----FGILFQALVEKLGFFKDP 136
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKH------------------------------ 283
++++ +++MYV +++ AR+++D++S +
Sbjct: 137 YVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEN 196
Query: 284 -LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQ 342
+V T M++G+AK +++AR FD++ EK +V W+AM+SGYA++ ++AL+LFN+M
Sbjct: 197 DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML 256
Query: 343 LRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC---- 398
+ P++ T + ISAC+ + R + D+ + V AL+DM+AKC
Sbjct: 257 RLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQ 316
Query: 399 ----------------------------GNLIRAKEVFENMPRKNVISWSSMINAFAMHG 430
G++ A+++F+ MP++NV+SW+S+I +A +G
Sbjct: 317 SARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNG 376
Query: 431 YANSAMNLFHRMKE-EDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
A A+ F M + D +P+ V I VL AC H +E G + I ++ I
Sbjct: 377 QAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIV-DYIRKNQIKLNDSG 435
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE-VELGEFAAKQILE- 547
Y ++ +Y R L +A + + M +V+ + +L +A +G+ VE +K E
Sbjct: 436 YRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEG 494
Query: 548 LEPDHDGALVVLS 560
+EPD VL+
Sbjct: 495 IEPDRVTYTSVLT 507
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 150/363 (41%), Gaps = 76/363 (20%)
Query: 74 FSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASAL 133
F ++P N +L +++ ++ L L+ + R+G A S +
Sbjct: 221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 134 YLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVF------------------ 175
L + L + + F++T L+ M++ CR I AR +F
Sbjct: 281 SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISG 340
Query: 176 --------------DKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEM-KTSDTKPDGVI 220
D M R+ V+WN +I GY +G ++ +E+M D+KPD V
Sbjct: 341 YTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT 400
Query: 221 LCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLS 280
+ +VLSACGH +L G I ++I N + L+ +L+ MY G + A+ ++D++
Sbjct: 401 MISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK 460
Query: 281 SKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNE 340
E+D+V ++ + + +A + E L L ++
Sbjct: 461 -------------------------------ERDVVSYNTLFTAFAANGDGVETLNLLSK 489
Query: 341 MQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGN 400
M+ I PD++T S ++AC G L + + I S+ N L D YA C +
Sbjct: 490 MKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFK-----------SIRNPLADHYA-CMD 537
Query: 401 LIR 403
L+R
Sbjct: 538 LLR 540
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 222 bits (565), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 249/493 (50%), Gaps = 36/493 (7%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
++HG +K GF S+ + L+ Y + DA VFD+M D ++WN ++ GY QSG
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 198 NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL-SAHLQ 256
+ + + L+ E+ SD P+ L+AC G IH ++ GL + +
Sbjct: 136 RFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 257 SALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV 316
+ L++MY CG MD A ++ + K V A+++ +++G ++ + F Q+ D V
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTV 255
Query: 317 C-------------------------------WSAMISGYAESDQPQEALKLFNEMQLRN 345
W+ +++GY S++ EA + F +M
Sbjct: 256 TYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSG 315
Query: 346 IVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAK 405
+ D+ ++ ++A A + + IH A K G + V +ALIDMY+KCG L A+
Sbjct: 316 VRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAE 375
Query: 406 EVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEED-IEPNGVIFIGVLYACSHA 464
+F MPRKN+I W+ MI+ +A +G + A+ LF+++K+E ++P+ F+ +L CSH
Sbjct: 376 LMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHC 435
Query: 465 GL-VEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWG 523
+ +E F MINE+ I P EH ++ + + +A ++I+ F + + W
Sbjct: 436 EVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWR 495
Query: 524 SLMSACQVHGEVELGEFAAKQILEL-EPDHDGAL-VVLSNIYAKERRWNDVGLIRQSMAN 581
+L+ AC +++ + A +++EL + D D L +V+SN+YA RW +VG IR+ M
Sbjct: 496 ALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRE 555
Query: 582 KGISKEKASSRVE 594
G+ KE SS ++
Sbjct: 556 SGVLKEVGSSWID 568
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 115/232 (49%), Gaps = 10/232 (4%)
Query: 318 WSAMISGYAESDQP---QEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
WS ++ A + A++L N+ + PD ++ + N G ++ R +H
Sbjct: 24 WSTIVPALARFGSIGVLRAAVELINDGE----KPDASPLVHLLRVSGNYGYVSLCRQLHG 79
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
Y K+GF + ++N+L+ Y +L A +VF+ MP +VISW+S+++ + G
Sbjct: 80 YVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQE 139
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG-CM 493
+ LF + D+ PN F L AC+ L G + S ++ + G+ + G C+
Sbjct: 140 GICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLV-KLGLEKGNVVVGNCL 198
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQI 545
+D+Y + + A+ + + M + + W +++++C +G++ELG + Q+
Sbjct: 199 IDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
V S +PNP++ N +L S + K+ G AV+ +
Sbjct: 276 VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAV 335
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
+ G IH A KLG S + + LI MYS C + A L+F M ++ + WN MI G
Sbjct: 336 VPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISG 395
Query: 193 YCQSGNYDQVLKLYEEMKTSD-TKPDGVILCTVLSACGH 230
Y ++G+ + +KL+ ++K KPD +L+ C H
Sbjct: 396 YARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSH 434
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 139/509 (27%), Positives = 239/509 (46%), Gaps = 32/509 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F P N ++R +++ L L+ ++ R + S++
Sbjct: 62 LFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFD 121
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
IHG+A G D + ++ YS I++A +F + D WN+MI G
Sbjct: 122 TKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILG 181
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
Y G +D+ + L+ M+ +P+ + + S L ++H F + L
Sbjct: 182 YGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSH 241
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+++ ALVNMY C + A +F+ I E
Sbjct: 242 SYVGCALVNMYSRCMC-------------------------------IASACSVFNSISE 270
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
DLV S++I+GY+ +EAL LF E+++ PD + + + +CA + + +
Sbjct: 271 PDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV 330
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
H+Y + G + V +ALIDMY+KCG L A +F +P KN++S++S+I +HG+A
Sbjct: 331 HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFA 390
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
++A F + E + P+ + F +L C H+GL+ +GQ++F M +E GI P+ EHY
Sbjct: 391 STAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVY 450
Query: 493 MVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDH 552
MV L A L +A E + S+ + I G+L+S C+VH L E A+ I + +
Sbjct: 451 MVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEER 510
Query: 553 DGAL-VVLSNIYAKERRWNDVGLIRQSMA 580
V+LSN+YA+ RW++V +R ++
Sbjct: 511 RSVYKVMLSNVYARYGRWDEVERLRDGIS 539
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 185/416 (44%), Gaps = 35/416 (8%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
++H +K DP+ T L Y+ ++ AR +FD R WN +I Y ++
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAH 85
Query: 198 NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
+ VL L+ ++ SDT+PD + S + + IH + +GL
Sbjct: 86 QFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLG------- 138
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVC 317
+D+ + +A++ Y+K G++ +A +F I + DL
Sbjct: 139 ------------------FDQ------ICGSAIVKAYSKAGLIVEASKLFCSIPDPDLAL 174
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
W+ MI GY + + LFN MQ R P+ TM++ S + L A +H +
Sbjct: 175 WNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCL 234
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMN 437
K V AL++MY++C + A VF ++ ++++ SS+I ++ G A++
Sbjct: 235 KINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALH 294
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLY 497
LF ++ +P+ V+ VL +C+ G+++ S +I G+ + ++D+Y
Sbjct: 295 LFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVI-RLGLELDIKVCSALIDMY 353
Query: 498 CRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILE--LEPD 551
+ LL+ AM L +P N++ + SL+ +HG +ILE L PD
Sbjct: 354 SKCGLLKCAMSLFAGIP-EKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPD 408
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 130/282 (46%), Gaps = 14/282 (4%)
Query: 287 STAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI 346
+T + YA + + AR +FD E+ + W+++I YA++ Q L LF+++ +
Sbjct: 43 ATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDT 102
Query: 347 VPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKE 406
PD T + R IH A +G G +A++ Y+K G ++ A +
Sbjct: 103 RPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASK 162
Query: 407 VFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGL 466
+F ++P ++ W+ MI + G+ + +NLF+ M+ +PN + + +GL
Sbjct: 163 LFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALT-----SGL 217
Query: 467 VEEGQKLFSSMINEHGIA---PRHEHYGC-MVDLYCRANLLRKAMELIESMPFAPNVIIW 522
++ L + ++ + H + GC +V++Y R + A + S+ P+++
Sbjct: 218 IDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-EPDLVAC 276
Query: 523 GSLM---SACQVHGEVELGEFAAKQILELEPDHDGALVVLSN 561
SL+ S C H E L FA ++ +PD +VL +
Sbjct: 277 SSLITGYSRCGNHKEA-LHLFAELRMSGKKPDCVLVAIVLGS 317
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 215 bits (548), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 178/325 (54%), Gaps = 16/325 (4%)
Query: 285 VVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAE-----SDQPQEALKLFN 339
++ T +L YAK+G ++ AR +FD++ E+ V W+AMI GY + ++A+ LF
Sbjct: 148 LIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFR 207
Query: 340 EMQL--RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSV--NNALIDMY 395
+ P TM+ +SA + G L +H Y +K GF + V AL+DMY
Sbjct: 208 RFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMY 267
Query: 396 AKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFI 455
+KCG L A VFE M KNV +W+SM A++G N NL +RM E I+PN + F
Sbjct: 268 SKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFT 327
Query: 456 GVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPF 515
+L A H GLVEEG +LF SM G+ P EHYGC+VDL +A +++A + I +MP
Sbjct: 328 SLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPI 387
Query: 516 APNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGA-------LVVLSNIYAKERR 568
P+ I+ SL +AC ++GE +GE K +LE+E + + V LSN+ A + +
Sbjct: 388 KPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGK 447
Query: 569 WNDVGLIRQSMANKGISKEKASSRV 593
W +V +R+ M + I S V
Sbjct: 448 WVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 141/312 (45%), Gaps = 47/312 (15%)
Query: 133 LYLGLEIHGLASKLGF-HSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
L +G +HG+ KLGF + I T L+ Y+ + AR VFD+M R +VTWN MI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 192 GYC---QSGNYD--QVLKLYEEMKT--SDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
GYC GN++ + + L+ S +P + VLSA +G L G +H +I
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 245 MDNGLA--LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKD 302
G + + +ALV+MY CG ++ A +++ + K++ T+M +G A +G
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNG---- 302
Query: 303 ARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACAN 362
+ E L N M I P++IT S +SA +
Sbjct: 303 ---------------------------RGNETPNLLNRMAESGIKPNEITFTSLLSAYRH 335
Query: 363 VGALAQARWIHTYAD-KNGFGRSLSVNN--ALIDMYAKCGNLIRAKEVFENMPRK-NVIS 418
+G + + I + K FG + + + ++D+ K G + A + MP K + I
Sbjct: 336 IGLVEEG--IELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAIL 393
Query: 419 WSSMINAFAMHG 430
S+ NA +++G
Sbjct: 394 LRSLCNACSIYG 405
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 126 AVSKASALYLGLEIHGLASKLGF--HSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDA 183
A+S+ L +G +HG KLGF D FI T L+ MYS C + +A VF+ M ++
Sbjct: 229 AISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNV 288
Query: 184 VTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYG 237
TW M G +G ++ L M S KP+ + ++LSA H G + G
Sbjct: 289 FTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEG 342
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 215/453 (47%), Gaps = 12/453 (2%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N ++ ++S P L L+ + G S L G +IHG+ K
Sbjct: 285 NAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK 344
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQ--VL 203
G + + LI Y+ C + D+RL FD + ++ V WN ++ GY N D L
Sbjct: 345 NGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGY---ANKDGPICL 401
Query: 204 KLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMY 263
L+ +M +P T L +C ++ + +H I+ G + ++ S+L+ Y
Sbjct: 402 SLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSY 457
Query: 264 VNCGAMDLARELYDKLSSKHLVVSTAMLSG-YAKHGMVKDARFIFDQIVEKDLVCWSAMI 322
M+ A L D S VV +++G Y++ G ++ + + + D V W+ I
Sbjct: 458 AKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAI 517
Query: 323 SGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFG 382
+ + SD +E ++LF M NI PD+ T +S +S C+ + L IH K F
Sbjct: 518 AACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFS 577
Query: 383 RSLS-VNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHR 441
+ + V N LIDMY KCG++ +VFE KN+I+W+++I+ +HGY A+ F
Sbjct: 578 CADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKE 637
Query: 442 MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRAN 501
+P+ V FI +L AC H G+V+EG LF M ++G+ P +HY C VDL R
Sbjct: 638 TLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNG 696
Query: 502 LLRKAMELIESMPFAPNVIIWGSLMSACQVHGE 534
L++A LI MPF + +W + + C E
Sbjct: 697 YLKEAEHLIREMPFPADAPVWRTFLDGCNRFAE 729
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 193/474 (40%), Gaps = 52/474 (10%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF Q+P + N +++ S+ ++ ++R G S
Sbjct: 71 VFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD-- 128
Query: 133 LYLGLEIHGLASKLG-FHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
+ G ++HGL+ K G F +D F+ T L+ +Y + A VF+ M + TWN M+
Sbjct: 129 VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMS 188
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
G + + + E+ VL +L K +H GL
Sbjct: 189 LLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGL-- 246
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+C + V +++S Y K G A +F
Sbjct: 247 -------------DC----------------EISVVNSLISAYGKCGNTHMAERMFQDAG 277
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
D+V W+A+I A+S+ P +ALKLF M P+Q T +S + + V L+ R
Sbjct: 278 SWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQ 337
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGY 431
IH KNG + + NALID YAKCGNL ++ F+ + KN++ W+++++ GY
Sbjct: 338 IHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLS-----GY 392
Query: 432 ANS----AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
AN ++LF +M + P F L +C V E Q+L S+I G
Sbjct: 393 ANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQL-HSVIVRMGYEDND 447
Query: 488 EHYGCMVDLYCRANLLRKAMELIE--SMP--FAPNVIIWGSLMSACQVHGEVEL 537
++ Y + L+ A+ L++ S P P I+ G Q H V+L
Sbjct: 448 YVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKL 501
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 3/178 (1%)
Query: 286 VSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN 345
V ++S Y K G V A +FDQ+ E++ V ++ +I GY++ +A +F+EM+
Sbjct: 51 VCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFG 110
Query: 346 IVPDQITMLSAISACANVGALAQARWIHTYADKNG-FGRSLSVNNALIDMYAKCGNLIRA 404
+P+Q T +S + +CA++ A + +H + K G F V L+ +Y + L A
Sbjct: 111 YLPNQST-VSGLLSCASLDVRAGTQ-LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMA 168
Query: 405 KEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACS 462
++VFE+MP K++ +W+ M++ G+ M F + F+GVL S
Sbjct: 169 EQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 353 MLSAISACANVGALAQARWIHTYADK--NGFGRSLSVNNALIDMYAKCGNLIRAKEVFEN 410
++S ++ C + A+ + +H + + + + V N +I +Y K G + A +VF+
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 411 MPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEG 470
MP +N +S++++I ++ +G + A +F M+ PN G+L +C+ V G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASLD-VRAG 132
Query: 471 QKLFSSMINEHGIAPRHEHY-------GCMVDLYCRANLLRKAMELIESMPFAPNVIIWG 523
+L HG++ ++ + C++ LY R +LL A ++ E MPF ++ W
Sbjct: 133 TQL-------HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPF-KSLETWN 184
Query: 524 SLMS 527
+MS
Sbjct: 185 HMMS 188
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/529 (24%), Positives = 252/529 (47%), Gaps = 35/529 (6%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
+F ++ + + CN LLR ++ + +Y ++ G + S
Sbjct: 169 LFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRL 228
Query: 133 LYLGLEIHGLASKLGFH-SDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMID 191
+Y G ++H L K G++ S+ F+ L+ YSAC + + F+ + +D ++WN ++
Sbjct: 229 VYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVS 288
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
G+ L L+ +M+ +P + L+ C + ++ GK IH +++ G +
Sbjct: 289 VCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDV 348
Query: 252 SA-HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
S+ H+QSAL++MY C ++ + LY L +L ++++ G+ KD
Sbjct: 349 SSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKD-------- 400
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV--GALAQ 368
+++F M D++T+ + + A + +L
Sbjct: 401 -----------------------IIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHS 437
Query: 369 ARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAM 428
+H A K+G+ ++V+ +LID Y K G +++VF+ + N+ +S+IN +A
Sbjct: 438 CTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYAR 497
Query: 429 HGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHE 488
+G + + M ++ P+ V + VL CSH+GLVEEG+ +F S+ +++GI+P +
Sbjct: 498 NGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRK 557
Query: 489 HYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILEL 548
Y CMVDL RA L+ KA L+ + + W SL+ +C++H +G AA+ ++ L
Sbjct: 558 LYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNL 617
Query: 549 EPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINN 597
EP++ + +S Y + + IR+ A++ + +E S V + N
Sbjct: 618 EPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 198/443 (44%), Gaps = 70/443 (15%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARL-VFDKMSHRDAVTWNIMIDGYC 194
G+++H LGF + F+++ L+ +Y AC R++D L +FD+M R+ N+++ +C
Sbjct: 131 GIQVHCRVISLGFGCNMFVRSALVGLY-ACLRLVDVALKLFDEMLDRNLAVCNLLLRCFC 189
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS-A 253
Q+G ++ ++Y M+ +G+ C ++ C H + GK +H ++ +G +S
Sbjct: 190 QTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNI 249
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
+ + LV+ Y CG LSG + F+ + EK
Sbjct: 250 FVANVLVDYYSACGD----------------------LSGSMRS---------FNAVPEK 278
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
D++ W++++S A+ ++L LF++MQ P +S ++ C+ + + IH
Sbjct: 279 DVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIH 338
Query: 374 TYADKNGFG-RSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
Y K GF SL V +ALIDMY KC + + +++++P N+ +S++ + G
Sbjct: 339 CYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGIT 398
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACS-------------HAGLVEEGQ----KLFS 475
+ +F M +E + V VL A S H ++ G +
Sbjct: 399 KDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSC 458
Query: 476 SMINEHGIAPRHEHYGCMVD------LYCRANLLR------------KAMELIESMPFAP 517
S+I+ + + ++E + D ++C +++ K + ++ M P
Sbjct: 459 SLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIP 518
Query: 518 NVIIWGSLMSACQVHGEVELGEF 540
+ + S++S C G VE GE
Sbjct: 519 DEVTILSVLSGCSHSGLVEEGEL 541
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 169/362 (46%), Gaps = 33/362 (9%)
Query: 168 IMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSA 227
++ A FD+MS RD VT+N++I G + G + ++LY EM + + +VLS
Sbjct: 62 LLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSV 121
Query: 228 CGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVS 287
C G +H ++ G + ++SALV +Y +D+A +L+D++ ++L V
Sbjct: 122 CSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVC 181
Query: 288 TAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIV 347
+L + + G + + +++ M+L +
Sbjct: 182 NLLLRCFCQTG-------------------------------ESKRLFEVYLRMELEGVA 210
Query: 348 PDQITMLSAISACANVGALAQARWIHTYADKNGFGRS-LSVNNALIDMYAKCGNLIRAKE 406
+ +T I C++ + + + +H+ K+G+ S + V N L+D Y+ CG+L +
Sbjct: 211 KNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMR 270
Query: 407 VFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGL 466
F +P K+VISW+S+++ A +G +++LF +M+ P+ F+ L CS
Sbjct: 271 SFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSD 330
Query: 467 VEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLM 526
++ G+++ ++ ++D+Y + N + + L +S+P N+ SLM
Sbjct: 331 IQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP-CLNLECCNSLM 389
Query: 527 SA 528
++
Sbjct: 390 TS 391
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 116/241 (48%), Gaps = 3/241 (1%)
Query: 296 KHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLS 355
K G + A FD++ +D+V ++ +ISG + A++L+ EM + T S
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 356 AISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR-AKEVFENMPRK 414
+S C++ + +H GFG ++ V +AL+ +YA C L+ A ++F+ M +
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALKLFDEMLDR 176
Query: 415 NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLF 474
N+ + ++ F G + ++ RM+ E + NG+ + ++ CSH LV EG++L
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 475 SSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGE 534
S ++ +VD Y L +M ++P +VI W S++S C +G
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSVCADYGS 295
Query: 535 V 535
V
Sbjct: 296 V 296
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 211/431 (48%), Gaps = 37/431 (8%)
Query: 168 IMDARLVFDKMSH-RDAVTWNIMIDGYCQSGNYDQVLKLYEEM-KTSDTKPDGVILCTVL 225
+ A L + MS RD +WN +I G SG++ + L+ ++ M + + D + L +
Sbjct: 529 LTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTI 588
Query: 226 SACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLV 285
SA G+ G + G+ H + + L LQ+ L+ MY C ++ A +
Sbjct: 589 SASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVK----------- 637
Query: 286 VSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRN 345
+F I + +L W+ +IS +++ +E +LF ++L
Sbjct: 638 --------------------VFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE- 676
Query: 346 IVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAK 405
P++IT + +SA +G+ + H + + GF + V+ AL+DMY+ CG L
Sbjct: 677 --PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGM 734
Query: 406 EVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE-EDIEPNGVIFIGVLYACSHA 464
+VF N ++ +W+S+I+A HG AM LF + ++EPN FI +L ACSH+
Sbjct: 735 KVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHS 794
Query: 465 GLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGS 524
G ++EG + M + G+ P EH +VD+ RA LR+A E I + +WG+
Sbjct: 795 GFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGA 854
Query: 525 LMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGI 584
L+SAC HG+ +LG+ A+ + E+EPD+ + L+N Y W + +R+ + + +
Sbjct: 855 LLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNAL 914
Query: 585 SKEKASSRVEI 595
K S +++
Sbjct: 915 KKLPGYSVIDV 925
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 211/453 (46%), Gaps = 61/453 (13%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGN 198
+H LA + G D + L+ +Y+ + A VF M HRD V+WN ++ +G+
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 199 YDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQ-- 256
+ L+ ++ M S + D V V+SAC L+ G+++H ++ +G + AH+
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329
Query: 257 SALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV 316
+++++MY CG + A ++++L + ++ S A+L+G+A +GM
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMF---------------- 373
Query: 317 CWSAMISGYAESDQPQEALKLFNEMQ-LRNIVPDQITMLSAISACANVGALAQARWIHTY 375
+EA + N+MQ + I PD T++S S C ++ + R +H Y
Sbjct: 374 ---------------EEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 376 ADKNGF-GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
+ R+L V N++IDMY KCG +A+ +F+ ++++SW+SMI+AF+ +G+ +
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHK 478
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV 494
A NLF + E Y+CS L L S ++ I + H C +
Sbjct: 479 AKNLFKEVVSE-------------YSCSKFSLSTVLAILTSCDSSDSLIFGKSVH--CWL 523
Query: 495 DLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPD--H 552
+ L A +E+M ++ W S++S C G L A Q + E H
Sbjct: 524 Q---KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGH-HLESLRAFQAMSREGKIRH 579
Query: 553 DGALVVLSNIYAKERRWNDVGLIRQSMANKGIS 585
D + +L I A ++GL+ Q G++
Sbjct: 580 D-LITLLGTISAS----GNLGLVLQGRCFHGLA 607
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 174/398 (43%), Gaps = 35/398 (8%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGN 198
+H A K G D + L+ Y ++ + +FD++ +D + WN MI Q+G
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 199 YDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSA 258
Y + L+ EM + D L SA +H ++ GL + L +A
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNA 228
Query: 259 LVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCW 318
L+N+ YAK + A +F + +D+V W
Sbjct: 229 LMNL-------------------------------YAKGENLSSAECVFTHMEHRDIVSW 257
Query: 319 SAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADK 378
+ +++ + P+++L+ F M D +T ISAC+++ L +H K
Sbjct: 258 NTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIK 317
Query: 379 NGFGRS--LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAM 436
+G+ +SV N++I MY+KCG+ A+ VFE + ++VIS ++++N FA +G A
Sbjct: 318 SGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAF 377
Query: 437 NLFHRMKEED-IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
+ ++M+ D I+P+ + + C EG+ + + + E ++D
Sbjct: 378 GILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVID 437
Query: 496 LYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
+Y + L +A EL+ +++ W S++SA +G
Sbjct: 438 MYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISAFSQNG 474
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 130/296 (43%), Gaps = 39/296 (13%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGN 198
HGLA K D +Q LI MY C+ I A VF +S + +WN +I Q+
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA 662
Query: 199 YDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSA 258
+V +L+ +K +P+ + +LSA G+ SYG H ++ G + + +A
Sbjct: 663 GREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAA 719
Query: 259 LVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCW 318
LV+MY +CG ++ +++ + +++S + HGM
Sbjct: 720 LVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGM------------------- 760
Query: 319 SAMISGYAESDQPQEALKLFNEMQLRN-IVPDQITMLSAISACANVGALAQA-RWIHTYA 376
++A++LF E+ + + P++ + +S +SAC++ G + + +
Sbjct: 761 ------------GEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQME 808
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM--PRKNVISWSSMINAFAMHG 430
+K G ++DM + G L A E + P+K + W ++++A HG
Sbjct: 809 EKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGV-WGALLSACNYHG 863
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 12/248 (4%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF I +P+ N ++ LS++ + ++Q R + A ++ +
Sbjct: 638 VFGLISDPNLCSWNCVISALSQNKAGRE---VFQLFRNLKLEPNEITFVGLLSASTQLGS 694
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
G++ H + GF ++PF+ L+ MYS+C + VF WN +I
Sbjct: 695 TSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISA 754
Query: 193 YCQSGNYDQVLKLYEEMKT-SDTKPDGVILCTVLSACGHSG----NLSYGKAIHEFIMDN 247
+ G ++ ++L++E+ + S+ +P+ ++LSAC HSG LSY K + E
Sbjct: 755 HGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKF--- 811
Query: 248 GLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLV-VSTAMLSGYAKHGMVKDARFI 306
G+ + +V+M G + A E + V A+LS HG K + +
Sbjct: 812 GVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEV 871
Query: 307 FDQIVEKD 314
+ + E +
Sbjct: 872 AEVLFEME 879
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
R +H +A K G + L+ ++ L+ Y + G L+ + +F+ + K+VI W+SMI A +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
G +A+ LF M + E + + A S L + L I E G+
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAI-ETGLVGDSSL 225
Query: 490 YGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG 533
+++LY + L A + M +++ W ++M+ C +G
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEH-RDIVSWNTIMTKCLANG 268
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 173/344 (50%), Gaps = 31/344 (9%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
KA S+ AL G ++H L K +D F+ T L+ MY+ C I D R VFD MS+R+ V
Sbjct: 292 KACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTV 351
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
TW +I + + G ++ + L+ MK + + + ++L ACG G L GK +H I
Sbjct: 352 TWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQI 411
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDAR 304
+ N + + ++ S LV +Y CG +DA
Sbjct: 412 IKNSIEKNVYIGSTLVWLYCKCGES-------------------------------RDAF 440
Query: 305 FIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVG 364
+ Q+ +D+V W+AMISG + EAL EM + P+ T SA+ ACAN
Sbjct: 441 NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSE 500
Query: 365 ALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMIN 424
+L R IH+ A KN ++ V +ALI MYAKCG + A VF++MP KN++SW +MI
Sbjct: 501 SLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIM 560
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVE 468
+A +G+ A+ L +RM+ E E + IF +L C L E
Sbjct: 561 GYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 196/399 (49%), Gaps = 34/399 (8%)
Query: 128 SKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWN 187
S+ + LG ++HG K+G + +++ L+ Y+ C + A FD M +D ++W
Sbjct: 195 SRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWT 253
Query: 188 IMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN 247
+I + G+ + + ++ M P+ +C++L AC L +G+ +H ++
Sbjct: 254 AVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVK- 312
Query: 248 GLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIF 307
++ + V T+++ YAK G + D R +F
Sbjct: 313 ------------------------------RMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
D + ++ V W+++I+ +A +EA+ LF M+ R+++ + +T++S + AC +VGAL
Sbjct: 343 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALL 402
Query: 368 QARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFA 427
+ +H KN +++ + + L+ +Y KCG A V + +P ++V+SW++MI+ +
Sbjct: 403 LGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCS 462
Query: 428 MHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
G+ + A++ M +E +EPN + L AC+++ + G+ + S H ++
Sbjct: 463 SLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVF 522
Query: 488 EHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLM 526
++ +Y + + +A + +SMP N++ W +++
Sbjct: 523 VG-SALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMI 559
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 201/419 (47%), Gaps = 43/419 (10%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMD---ARLVFDKMSHRDAVTWNIMIDGYCQ 195
IH +A K + LI S+C R+ D AR VFD M ++ VTW MIDGY +
Sbjct: 104 IHAMALKCFDDQVIYFGNNLI---SSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLK 160
Query: 196 SGNYDQVLKLYEE-MKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
G D+ L+E+ +K + + +L+ C G+ +H ++ G+
Sbjct: 161 YGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG---- 216
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
+L+V ++++ YA+ G + A FD + EKD
Sbjct: 217 ----------------------------NLIVESSLVYFYAQCGELTSALRAFDMMEEKD 248
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
++ W+A+IS + +A+ +F M +P++ T+ S + AC+ AL R +H+
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHS 308
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
K + V +L+DMYAKCG + ++VF+ M +N ++W+S+I A A G+
Sbjct: 309 LVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEE 368
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV 494
A++LF MK + N + + +L AC G + G++L + +I ++ I +V
Sbjct: 369 AISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII-KNSIEKNVYIGSTLV 427
Query: 495 DLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHG-EVELGEFAAKQILE-LEPD 551
LYC+ R A +++ +P + +V+ W +++S C G E E +F + I E +EP+
Sbjct: 428 WLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPN 485
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 107/231 (46%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
VF + N +T ++ +R + + L++ ++R +A A
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGA 400
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L LG E+H K + +I + L+ +Y C DA V ++ RD V+W MI G
Sbjct: 401 LLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISG 460
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALS 252
G+ + L +EM +P+ + L AC +S +L G++IH N +
Sbjct: 461 CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSN 520
Query: 253 AHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDA 303
+ SAL++MY CG + A ++D + K+LV AM+ GYA++G ++A
Sbjct: 521 VFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREA 571
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 73 VFSQIPNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASA 132
V Q+P+ D ++ S L +++ + G KA + + +
Sbjct: 442 VLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSES 501
Query: 133 LYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDG 192
L +G IH +A K S+ F+ + LI MY+ C + +A VFD M ++ V+W MI G
Sbjct: 502 LLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMG 561
Query: 193 YCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACG 229
Y ++G + LKL M+ + D I T+LS CG
Sbjct: 562 YARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCG 598
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 222/469 (47%), Gaps = 34/469 (7%)
Query: 136 GLEIHGLASKLGFHS-DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYC 194
G +IHG A G + + ++ MY A VF M RD V+WN +I
Sbjct: 152 GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCS 211
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
SGN + L + M+ + +PD + V+S C LS GK + G ++
Sbjct: 212 DSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSI 271
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD 314
+ A ++M+ C +D + +L+ +L V+ +M+ Y+ H +DA
Sbjct: 272 VLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDA----------- 320
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
L+LF +++ PD+ T S +S+ N L +H+
Sbjct: 321 --------------------LRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHS 359
Query: 375 YADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANS 434
K GF +V +L++MY K G++ A VF K++I W+++I A + A
Sbjct: 360 LVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVE 419
Query: 435 AMNLFHRM-KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCM 493
++ +F+++ + ++P+ V +G+L AC +AG V EG ++FSSM HG+ P +EHY C+
Sbjct: 420 SLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACI 479
Query: 494 VDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHD 553
++L CR ++ +A ++ + +PF P+ IW ++ A G+ L E AK +LE EP
Sbjct: 480 IELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSS 539
Query: 554 GALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVF 602
+VL IY RW + +R +M + + SS++ I + V F
Sbjct: 540 FPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 162/335 (48%), Gaps = 12/335 (3%)
Query: 235 SYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGY 294
+ K +H +++ G + + + + +Y G++ A +L+D + K+ + L G
Sbjct: 21 TLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGL 80
Query: 295 AKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQIT-- 352
K+G + +A +FD++ E+D+V W+ MISG + +++F +MQ I P + T
Sbjct: 81 FKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFS 140
Query: 353 MLSAISACANVGALAQARWIHTYADKNGFGR-SLSVNNALIDMYAKCGNLIRAKEVFENM 411
+L+++ C G IH A +G R +L V N+++DMY + G A VF M
Sbjct: 141 ILASLVTCVRHGEQ-----IHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTM 195
Query: 412 PRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQ 471
++V+SW+ +I + + G A++ F M+E +I+P+ V+ CS + +G+
Sbjct: 196 EDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGK 255
Query: 472 KLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQV 531
+ + I + G G +D++ + N L +++L + +V+ S++ +
Sbjct: 256 QALALCI-KMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLC-NSMIGSYSW 313
Query: 532 H--GEVELGEFAAKQILELEPDHDGALVVLSNIYA 564
H GE L F + PD VLS++ A
Sbjct: 314 HCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 348
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 158/343 (46%), Gaps = 9/343 (2%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGN 198
+H + GF + + +Y +++A +FD + ++ +TWN+ + G ++G
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 199 YDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSA 258
+ L L++EM D V T++S G YG + F M +
Sbjct: 86 LNNALDLFDEMPERDV----VSWNTMISGLVSCGFHEYGIRVF-FDMQRWEIRPTEFTFS 140
Query: 259 LVNMYVNC---GAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
++ V C G + +S +LVV +++ Y + G+ A +F + ++D+
Sbjct: 141 ILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDV 200
Query: 316 VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTY 375
V W+ +I ++S + AL F M+ I PD+ T+ +S C+++ L++ +
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALAL 260
Query: 376 ADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSA 435
K GF + V A IDM++KC L + ++F + + + + +SMI +++ H A
Sbjct: 261 CIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDA 320
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI 478
+ LF + + P+ F VL + +A +++ G + S +I
Sbjct: 321 LRLFILAMTQSVRPDKFTFSSVL-SSMNAVMLDHGADVHSLVI 362
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 225/511 (44%), Gaps = 74/511 (14%)
Query: 73 VFSQIPNPDTHFCNQLLR--LLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKA 130
VF + + + + N LLR ++S Q+ L + ++R +G K+ + A
Sbjct: 168 VFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGA 227
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMI 190
SAL GL+ H LA K G + F++T L+ MY C ++ AR VFD++ RD V W MI
Sbjct: 228 SALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMI 287
Query: 191 DGYCQSGNYDQVLKLYEEMKTSD-TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN-G 248
G + + L L+ M + + P+ VIL T+L G L GK +H ++ +
Sbjct: 288 AGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKN 347
Query: 249 LALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDA----- 303
+ S L+++Y CG M R ++ ++ + TA++SGYA +G A
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIV 407
Query: 304 -----RFIFDQIV----------------EKDLVCW-------------SAMISGYAESD 329
F D + K++ C+ ++++ Y++
Sbjct: 408 WMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCG 467
Query: 330 QPQEALKLFNEMQLRNIV-------------------------------PDQITMLSAIS 358
P+ ++LF+ ++ RN+ PD +TM ++
Sbjct: 468 VPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLT 527
Query: 359 ACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS 418
C+++ AL + +H + K F V+ +I MY KCG+L A F+ + K ++
Sbjct: 528 VCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLT 587
Query: 419 WSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI 478
W+++I A+ + A+N F +M PN F VL CS AG V+E + F+ M+
Sbjct: 588 WTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLML 647
Query: 479 NEHGIAPRHEHYGCMVDLYCRANLLRKAMEL 509
+ + P EHY +++L R + +A L
Sbjct: 648 RMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/499 (23%), Positives = 218/499 (43%), Gaps = 70/499 (14%)
Query: 89 LRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGF 148
+++ +R + L + L + G +A + +L G ++H G
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 149 HSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGN--YDQVLKLY 206
S+ F++T L+ MY+AC + DA+ VFD+ + + +WN ++ G SG Y VL +
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 207 EEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNC 266
EM+ + L V + + L G H + NGL S L+++LV+MY C
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 267 GAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYA 326
G + LAR ++D++ + +VV W AMI+G A
Sbjct: 263 GKVGLARRVFDEIVERDIVV-------------------------------WGAMIAGLA 291
Query: 327 ESDQPQEALKLFNEM-QLRNIVPDQITMLSAISACANVGALAQARWIHTYADKN-GFGRS 384
+ + EAL LF M I P+ + + + + +V AL + +H + K+ +
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 385 LSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKE 444
V++ LID+Y KCG++ + VF ++N ISW+++++ +A +G + A+ M++
Sbjct: 352 PFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQ 411
Query: 445 EDIEPNGVIFIGVLYACSHAGLVEEGQKL------------------FSSMINEHGIAPR 486
E P+ V VL C+ +++G+++ M ++ G+ P
Sbjct: 412 EGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV-PE 470
Query: 487 H-------------EHYGCMVDLYCRANLLRKAMELIESMPFA---PNVIIWGSLMSACQ 530
+ + + M+D Y LR +E+ M + P+ + G +++ C
Sbjct: 471 YPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCS 530
Query: 531 VHGEVELGEFAAKQILELE 549
++LG+ IL+ E
Sbjct: 531 DLKALKLGKELHGHILKKE 549
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 157/358 (43%), Gaps = 38/358 (10%)
Query: 180 HRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKA 239
HRD I + + N + L + + ++ + +L AC +L +GK
Sbjct: 80 HRD-------IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQ 132
Query: 240 IHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGM 299
+H I NGL + L++ LV+MY CG++ A++++D+ +S ++ A+L G
Sbjct: 133 VHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRG------ 186
Query: 300 VKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISA 359
+ISG + Q+ L F EM+ + + ++ + +
Sbjct: 187 --------------------TVISG---KKRYQDVLSTFTEMRELGVDLNVYSLSNVFKS 223
Query: 360 CANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISW 419
A AL Q H A KNG S+ + +L+DMY KCG + A+ VF+ + ++++ W
Sbjct: 224 FAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVW 283
Query: 420 SSMINAFAMHGYANSAMNLFHRM-KEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI 478
+MI A + A+ LF M EE I PN VI +L ++ G+++ + ++
Sbjct: 284 GAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVL 343
Query: 479 NEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVE 536
+ + ++DLYC+ + + N I W +LMS +G +
Sbjct: 344 KSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSK-QRNAISWTALMSGYAANGRFD 400
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 128 SKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWN 187
S AL LG E+HG K F S PF+ +I MY C + A FD ++ + ++TW
Sbjct: 530 SDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWT 589
Query: 188 IMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMD- 246
+I+ Y + + + +E+M + P+ VLS C +G + ++
Sbjct: 590 AIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRM 649
Query: 247 NGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL 284
L S S ++ + CG ++ A+ L SS L
Sbjct: 650 YNLQPSEEHYSLVIELLNRCGRVEEAQRLAVMSSSSSL 687
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 217/507 (42%), Gaps = 68/507 (13%)
Query: 190 IDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE----FIM 245
D YC N L E+++ D V L + C GN+ Y ++ E ++
Sbjct: 142 FDEYCIQENVRVALTTMEKLEKKGYVMDFVRLLKLTQLC-REGNVYYEVSVLEEAKVSVL 200
Query: 246 DNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARF 305
AL +L++ + Y D+ E YD + KHG VK A +
Sbjct: 201 AKIRALVNNLEANYLKYYT-----DIMIEEYD---------------AFCKHGKVKKALY 240
Query: 306 IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA 365
D + N V D +L C
Sbjct: 241 TIDILASM-------------------------------NYVVDLSRLLRLAKICGEAEG 269
Query: 366 LAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINA 425
L +A+ +H + LS N+ L++MY+ CG A VFE M KN+ +W +I
Sbjct: 270 LQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRC 329
Query: 426 FAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAP 485
FA +G+ A+++F R KEE P+G +F G+ YAC G V+EG F SM ++GIAP
Sbjct: 330 FAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAP 389
Query: 486 RHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQI 545
E Y +V++Y L +A+E +E MP PNV +W +LM+ +VHG +ELG++ A+ +
Sbjct: 390 SIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVV 449
Query: 546 LELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMA 605
L+P K+ R + ++ S K K+++ + + + F
Sbjct: 450 EFLDPTR----------LNKQSREGFIP-VKASDVEKESLKKRSGILHGVKSSMQEFRAG 498
Query: 606 DRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLI 665
D ++ E+++ L + + V Y T HSE++A ++
Sbjct: 499 DTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVL 558
Query: 666 SKRRKESCIRIVKNLRICEDCHSFMKL 692
+ ++ ++KNLR+C DCH+ +K+
Sbjct: 559 NSAPRKP-FTVIKNLRVCVDCHNALKI 584
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
K +A L +HG S H D L+ MYS C +A VF+KMS ++
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
TW I+I + ++G + + ++ K PDG + + ACG G++ G E +
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 245 -MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL 279
D G+A S +LV MY G +D A E +++
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERM 417
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 174/361 (48%), Gaps = 17/361 (4%)
Query: 332 QEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNAL 391
+EA+++ + ++ + D I +L C AL AR +H + NA+
Sbjct: 101 REAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAI 160
Query: 392 IDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNG 451
I+MY+ C ++ A +VFE MP N + M+ F +GY A++LF R KEE +PNG
Sbjct: 161 IEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNG 220
Query: 452 VIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIE 511
IF V C+ G V+EG F +M E+GI P EHY + + + L +A+ +E
Sbjct: 221 EIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVE 280
Query: 512 SMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWND 571
MP P+V +W +LM+ +VHG+VELG+ A+ + +L+ + + +
Sbjct: 281 RMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDA-------------TRLDKVSS 327
Query: 572 VGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSY 631
GL+ ++ K++ S+R E F D H Q IY+ L + S+LK + Y
Sbjct: 328 AGLVATKASD--FVKKEPSTRSE-PYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGY 384
Query: 632 TPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMK 691
P T + E++A+ L+ K + S I ++ N+RI DCH MK
Sbjct: 385 VPDTRYYRSLIMAMENKEQIFGYREEIAVVESLL-KSKPRSAITLLTNIRIVGDCHDMMK 443
Query: 692 L 692
L
Sbjct: 444 L 444
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 1/156 (0%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAV 184
K K AL +H L D + +I MYS C + DA VF++M ++
Sbjct: 127 KLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSG 186
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGK-AIHEF 243
T +M+ + +G ++ + L+ K KP+G I V S C +G++ G
Sbjct: 187 TLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAM 246
Query: 244 IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL 279
+ G+ S ++ M G +D A +++
Sbjct: 247 YREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERM 282
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 180/353 (50%), Gaps = 30/353 (8%)
Query: 340 EMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCG 399
E+ + +PD+ + +CAN+ +L ++ +H + ++ F +NN +I M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 400 NLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLY 459
++ AK VF++M K++ SW M+ A++ +G + A++LF M + ++PN F+ V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 460 ACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNV 519
AC+ G +EE F SM NEHGI+P+ EHY ++ + + L +A + I +PF P
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 520 IIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSM 579
W ++ + ++HG+++L ++ + +++++P + V++ I +
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDP----SKAVINKIPTPPPK----------- 450
Query: 580 ANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELKLVSYTPSTSGXX 639
K ++ V + + F Y +++E+ K K V Y P T
Sbjct: 451 ------SFKETNMVTSKSRILEFRNLTFYKDEAKEMAAK--------KGVVYVPDTRFVL 496
Query: 640 XXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFMKL 692
+HSE+LA+ YG+I +++ + I+KNLR+C DCH+F+K+
Sbjct: 497 HDIDQEAKEQALLYHSERLAIAYGIICTPPRKT-LTIIKNLRVCGDCHNFIKI 548
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 106/240 (44%), Gaps = 39/240 (16%)
Query: 194 CQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
CQ Y ++L ++ PD + +C + +L + K +H+ + +
Sbjct: 216 CQRRLYKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDP 271
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
L + +++M+ C + + DA+ +FD +V+K
Sbjct: 272 KLNNMVISMFGECSS-------------------------------ITDAKRVFDHMVDK 300
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
D+ W M+ Y+++ +AL LF EM + P++ T L+ ACA VG + +A ++H
Sbjct: 301 DMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEA-FLH 359
Query: 374 TYADKNGFGRSLSVNNAL--IDMYAKCGNLIRAKEVFENMPRKNVIS-WSSMINAFAMHG 430
+ KN G S + L + + KCG+L+ A++ ++P + W +M N +HG
Sbjct: 360 FDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 140 HGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNY 199
H L SK F DP + +I+M+ C I DA+ VFD M +D +W++M+ Y +G
Sbjct: 261 HFLQSK--FRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMG 318
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSAL 259
D L L+EEM KP+ TV AC G + +H M N +S + L
Sbjct: 319 DDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPKTEHYL 377
Query: 260 --VNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAK-HGMVKDARFIFDQIVEKD 314
+ + CG + A + L + + YA+ HG + ++ + +V+ D
Sbjct: 378 GVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVD 435
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 176/362 (48%), Gaps = 19/362 (5%)
Query: 332 QEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNAL 391
++A+++ + V D + C + AL +A+ +H + + +S N++
Sbjct: 163 KKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSI 222
Query: 392 IDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNG 451
I+MY+ CG++ A VF +MP +N+ +W +I FA +G A++ F R K+E +P+G
Sbjct: 223 IEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDG 282
Query: 452 VIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIE 511
+F + +AC G + EG F SM E+GI P EHY +V + L +A+ +E
Sbjct: 283 EMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVE 342
Query: 512 SMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWND 571
SM PNV +W +LM+ +VHG++ LG+ + +L+ ++ + +
Sbjct: 343 SM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDA-------------SRLNKESK 387
Query: 572 VGLIRQSMANKGISKEKASSRVEINNEVHVFMMA-DRYHKQSREIYKKLEEVVSELKLVS 630
GL+ + + + KEK + N +M A D ++RE+Y L+ + + +
Sbjct: 388 AGLV--PVKSSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMALKSLKEHMIEIG 445
Query: 631 YTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRICEDCHSFM 690
Y P + H+E+ A + + S IR++KNLR+C DCH+ +
Sbjct: 446 YVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPAR-SLIRVMKNLRVCADCHNAL 504
Query: 691 KL 692
KL
Sbjct: 505 KL 506
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 105/245 (42%), Gaps = 39/245 (15%)
Query: 190 IDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN-G 248
+D C+ G + +++ + + D L + CG + L K +HEFI + G
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 249 LA-LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIF 307
++ +SA+ ++++ MY CG+ V+DA +F
Sbjct: 213 ISDISAY--NSIIEMYSGCGS-------------------------------VEDALTVF 239
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
+ + E++L W +I +A++ Q ++A+ F+ + PD AC +G +
Sbjct: 240 NSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMN 299
Query: 368 QARWIHTYADKNGFGRSLSVNN--ALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINA 425
+ +H + +G + + +L+ M A+ G L A E+M NV W +++N
Sbjct: 300 EG-LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM-EPNVDLWETLMNL 357
Query: 426 FAMHG 430
+HG
Sbjct: 358 SRVHG 362
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 142 LASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQ 201
+ S +G SD +I MYS C + DA VF+ M R+ TW +I + ++G +
Sbjct: 207 ITSSVGI-SDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGED 265
Query: 202 VLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYG 237
+ + K KPDG + + ACG G+++ G
Sbjct: 266 AIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEG 301
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 171/369 (46%), Gaps = 32/369 (8%)
Query: 332 QEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH---TYADKNGFGRSLSVN 388
+EAL++ + ++ + + D +L C V AL +AR +H T D +
Sbjct: 94 REALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARSY------- 146
Query: 389 NALIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIE 448
+ +I+MY+ C + A VF MP++N +W +MI A +G A+++F R EE +
Sbjct: 147 HTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNK 206
Query: 449 PNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAME 508
P+ IF V +AC G + EG F SM ++G+ E Y ++++ L +A++
Sbjct: 207 PDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALD 266
Query: 509 LIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERR 568
+E M P+V +W +LM+ C V G +ELG+ A+ I +L+ ++ +
Sbjct: 267 FVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDA-------------SRMSK 313
Query: 569 WNDVGLIRQSMANKGISKEKASS-----RVEINNEVHVFMMADRYHKQSREIYKKLEEVV 623
++ GL+ ++ + K K R + +H F D H + ++ L+
Sbjct: 314 ESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKKRMHEFRAGDTSHLGTVSAFRSLK--- 370
Query: 624 SELKLVSYTPSTSGXXXXXXXXXXXXXXXWHSEKLALCYGLISKRRKESCIRIVKNLRIC 683
++ + + P+T + S KLA + +I+ + + +++N+R C
Sbjct: 371 VQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRP-LTVLQNMRTC 429
Query: 684 EDCHSFMKL 692
D H+ K+
Sbjct: 430 IDGHNTFKM 438
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 158 LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPD 217
+I MYS CR DA VF++M R++ TW MI ++G ++ + ++ KPD
Sbjct: 149 VIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPD 208
Query: 218 GVILCTVLSACGHSGNLSYGKAIHEFIM-DNGLALSAHLQSALVNMYVNCGAMDLARELY 276
I V AC G+++ G E + D G+ LS ++ M CG +D A +
Sbjct: 209 KEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFV 268
Query: 277 DKLS 280
++++
Sbjct: 269 ERMT 272
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 266 CG---AMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMI 322
CG A++ AR ++D ++ ++ Y+ DA +F+++ +++ W MI
Sbjct: 122 CGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMI 181
Query: 323 SGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFG 382
A++ + + A+ +F PD+ + AC ++G + + +H + +G
Sbjct: 182 RCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEG-LLHFESMYRDYG 240
Query: 383 RSLSVNN--ALIDMYAKCGNLIRAKEVFENMP-RKNVISWSSMINAFAMHGY 431
LS+ + +I+M A CG+L A + E M +V W +++N + GY
Sbjct: 241 MVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGY 292
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 184/394 (46%), Gaps = 23/394 (5%)
Query: 136 GLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFD---KMSHR-DAVTWNIMID 191
G+E++G+ D + T +I Y ++++ A V K+ + D +T++ +++
Sbjct: 95 GMELNGI------EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN 148
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
G+C G + + L + M +PD V + T+++ G +S + + +++ G
Sbjct: 149 GFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQP 208
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTA----MLSGYAKHGMVKDARFIF 307
++N G LA +L+ K+ +++ S ++ K G DA +F
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 308 DQI----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV 363
+++ ++ D+V +S++I G + + K+ EM RNI+PD +T + I
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 328
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISW 419
G L +A+ ++ G N+LID + K L A ++F+ M K +++++
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 420 SSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMIN 479
S +IN++ + M LF + + + PN + + ++ +G + ++LF M++
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 480 EHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
G+ P YG ++D C L KA+E+ E M
Sbjct: 449 -RGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 173/358 (48%), Gaps = 21/358 (5%)
Query: 174 VFDKMSHRD----AVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACG 229
+F KM R+ V ++I+ID C+ G++D L L+ EM+ K D V +++
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 230 HSGNLSYG-KAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVST 288
+ G G K + E I N + SAL++++V G + A+ELY+++ ++ + T
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTF-SALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 289 ----AMLSGYAKHGMVKDARFIFDQIVEK----DLVCWSAMISGYAESDQPQEALKLFNE 340
+++ G+ K + +A +FD +V K D+V +S +I+ Y ++ + + ++LF E
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 341 MQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGN 400
+ + ++P+ IT + + G L A+ + G S+ L+D G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 401 LIRAKEVFENMPRKNVISWSSMINAFAMHGYANS-----AMNLFHRMKEEDIEPNGVIFI 455
L +A E+FE M +K+ ++ I +HG N+ A +LF + ++ ++P+ V +
Sbjct: 471 LNKALEIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 456 GVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
++ G + E LF M E G P Y ++ + + L ++ELIE M
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKM-KEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 12/262 (4%)
Query: 147 GFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQV 202
G D LI + + +A +FD M + D VT++I+I+ YC++ D
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 203 LKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNM 262
++L+ E+ + P+ + T++ SG L+ K + + ++ G+ S L++
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 263 YVNCGAMDLARELYDKLSSKHLVVSTA----MLSGYAKHGMVKDARFIF----DQIVEKD 314
+ G ++ A E+++K+ + + ++ G V DA +F D+ V+ D
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
+V ++ MI G + EA LF +M+ PD T I A L + +
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 375 YADKNGFGRSLSVNNALIDMYA 396
GF S +IDM +
Sbjct: 585 EMKVCGFSADSSTIKMVIDMLS 606
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 172/376 (45%), Gaps = 22/376 (5%)
Query: 147 GFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSH----RDAVTWNIMIDGYCQSGNYDQV 202
GF D + ++ ++ A L+F++M D T+ IM+D +C++G +Q
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 203 LKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNM 262
K + EM+ P+ V ++ A + +SY + E ++ G + SAL++
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 263 YVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK-DLVCWSAM 321
+ G ++ A ++++++ V M Y K +D E+ ++V + A+
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDM---YFKQ---------YDDNSERPNVVTYGAL 645
Query: 322 ISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGF 381
+ G+ +S + +EA KL + M + P+QI + I VG L +A+ + T ++GF
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 382 GRSLSVNNALIDMYAKCGNLIRAKEV----FENMPRKNVISWSSMINAFAMHGYANSAMN 437
+L ++LID Y K A +V EN NV+ ++ MI+ G + A
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLY 497
L M+E+ +PN V + ++ G +E +L M G+AP + Y ++D
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM-GSKGVAPNYVTYRVLIDHC 824
Query: 498 CRANLLRKAMELIESM 513
C+ L A L+E M
Sbjct: 825 CKNGALDVAHNLLEEM 840
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 154/378 (40%), Gaps = 52/378 (13%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D V + +I G C++ +++ + M+ + P+ V T+L C + L K +
Sbjct: 301 DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL 360
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVK 301
+M G S + ++LV+ Y G A +L K+ V + GY + ++
Sbjct: 361 NMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM------VKCGHMPGYVVYNILI 414
Query: 302 DARFIFDQIVEKDLVCWSAMISGYAES---DQPQEALKLFNEMQLRNIVPDQITMLSAIS 358
+ I G +S D A K ++EM +V ++I + S
Sbjct: 415 GS------------------ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTR 456
Query: 359 ACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR----K 414
+ G +A + GF S + +++ + A +FE M R
Sbjct: 457 CLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 415 NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLF 474
+V +++ M+++F G A F+ M+E PN V + +++A A V +LF
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 475 SSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFA------------------ 516
+M++E G P Y ++D +C+A + KA ++ E M +
Sbjct: 577 ETMLSE-GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635
Query: 517 -PNVIIWGSLMSA-CQVH 532
PNV+ +G+L+ C+ H
Sbjct: 636 RPNVVTYGALLDGFCKSH 653
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 114/279 (40%), Gaps = 47/279 (16%)
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGY 193
E+ S+ GF + + + LI Y +R A V KM + V + MIDG
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 194 CQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
C+ G D+ KL + M+ +P+ V ++ G G + + E + G+A +
Sbjct: 755 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTA----MLSGYAKH-----GMVKDA- 303
L++ GA+D+A L +++ H TA ++ G+ K G++ +
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIG 874
Query: 304 -----------RFIFDQIVE-----------KDLVCWSAMISGYAES-----------DQ 330
R + D +++ +++ +SA + Y+ + ++
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 331 PQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
+ A +LF+EM + ++P+ + S I +++A
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/401 (19%), Positives = 153/401 (38%), Gaps = 58/401 (14%)
Query: 183 AVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE 242
A +N ++D + + + ++++ D + G L ++ H N S+ A+ E
Sbjct: 165 APVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRK--HCRNGSFSIALEE 222
Query: 243 F--IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYA----K 296
+ D S + L+ ++ +D A ++ ++S +L + L +A K
Sbjct: 223 LGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCK 282
Query: 297 HGMVKDARFIFD-QIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLS 355
G ++A + + + D V ++ +ISG E+ +EA+ N M+ + +P+ +T +
Sbjct: 283 VGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYST 342
Query: 356 AISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMY----------------AKCG 399
+ C N L + + + G S + N+L+ Y KCG
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 400 N-------------------------LIRAKEVFENMPRKNV----ISWSSMINAFAMHG 430
+ L A++ + M V I+ SS G
Sbjct: 403 HMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAG 462
Query: 431 YANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHY 490
A ++ M + P+ + VL +A +E LF M G+ Y
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM-KRGGLVADVYTY 521
Query: 491 GCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSA 528
MVD +C+A L+ +A + M PNV+ + +L+ A
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 199/476 (41%), Gaps = 67/476 (14%)
Query: 147 GFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQV 202
G D F LI S +R+ +AR +M +A T+ I GY ++ +
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Query: 203 LKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNM 262
K +EM+ P+ V+ +++ G + + + ++D G+ A + L+N
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 263 YVNCGAMDLARELYDKLSSKHLVVST----AMLSGYAKHGMVKDARFIFDQIVEKDL--- 315
+D A E++ ++ K + +++G++K G ++ A IFD++VE+ L
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 316 ------------------------------------VCWSAMISGYAESDQPQEALKLFN 339
V + +I GY +S EA +LF+
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 340 EMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCG 399
EM+L+ +VPD + + C + + +A I +K G S + NALI+ K G
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFG 780
Query: 400 NLIRAKEV--------FENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNG 451
EV F+ + N ++++ MI+ G +A LFH+M+ ++ P
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 452 VIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIE 511
+ + +L G E +F I GI P H Y +++ + + + KA+ L++
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAI-AAGIEPDHIMYSVIINAFLKEGMTTKALVLVD 899
Query: 512 SMPFAPNVIIWG---------SLMSACQVHGEVELGEFAAKQILELEPDHDGALVV 558
M FA N + G +L+S GE+E+ E + ++ L+ D A V+
Sbjct: 900 QM-FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 185/441 (41%), Gaps = 59/441 (13%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
+ V + +I + Q+ + +++ +EMK PD +++ + + ++
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCG----AMDLARELYDKLSSKHLVVSTAMLSGYAKH 297
+++NGL +A A ++ Y+ A +E+ + + V+ T +++ Y K
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 298 GMVKDA----RFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM 353
G V +A R + DQ + D ++ +++G ++D+ +A ++F EM+ + I PD +
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
I+ + +G + +A I + G ++ + N L+ + + G + +AKE+ + M
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 414 K----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEE 469
K N +++ ++I+ + G A LF MK + + P+ ++ ++ C VE
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 470 GQKLFSSMINEHGIA---------------------------------------PRHEHY 490
+F + N+ G A P Y
Sbjct: 751 AITIFGT--NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 491 GCMVDLYCRANLLRKAMELIESMPFA---PNVIIWGSLMSACQVHG-EVELGEFAAKQIL 546
M+D C+ L A EL M A P VI + SL++ G E+ + I
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 547 E-LEPDHDGALVVLSNIYAKE 566
+EPDH V++ N + KE
Sbjct: 869 AGIEPDHIMYSVII-NAFLKE 888
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/489 (21%), Positives = 196/489 (40%), Gaps = 85/489 (17%)
Query: 158 LIAMYSACRRIMDARL----------VFDKMSHRDAV----TWNIMIDGYCQSGNY---- 199
L+ S C+ ++DA L V+ M R+ V T++++I +C++GN
Sbjct: 182 LVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGK 241
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN------------ 247
D + K +E +T+ DG + C L Y ++ ++D
Sbjct: 242 DVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKY---TYDVLIDGLCKIKRLEDAKS 298
Query: 248 --------GLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAM----LSGYA 295
G++L H S L++ + D A+ L ++ S + + M + +
Sbjct: 299 LLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMS 358
Query: 296 KHGMVKDARFIFDQIVEKDLV----CWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQI 351
K G+++ A+ +FD ++ L+ ++++I GY ++ +L EM+ RNIV
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 352 TMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM 411
T + + + G L A I KE+ +
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNI-------------------------------VKEMIASG 447
Query: 412 PRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQ 471
R NV+ ++++I F + AM + MKE+ I P+ + ++ S A ++E +
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 472 KLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSA 528
M+ E+G+ P YG + Y A+ A + ++ M PN ++ L++
Sbjct: 508 SFLVEMV-ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 529 CQVHGEVELGEFAAKQILELEPDHDG-ALVVLSNIYAKERRWNDVGLIRQSMANKGISKE 587
G+V A + +++ D VL N K + +D I + M KGI+ +
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 588 KASSRVEIN 596
S V IN
Sbjct: 627 VFSYGVLIN 635
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/412 (19%), Positives = 170/412 (41%), Gaps = 48/412 (11%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYC 194
+H + S G + P++ I + S + A+ +FD M A + +I+GYC
Sbjct: 335 VHEMVSH-GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
+ N Q +L EMK + TV+ SG+L
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD------------------- 434
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK- 313
GA ++ +E+ ++V+ T ++ + ++ DA + ++ E+
Sbjct: 435 ------------GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 314 ---DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR 370
D+ C++++I G +++ + EA EM + P+ T + IS A A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVI----SWSSMINAF 426
+ G + + LI+ Y K G +I A + +M + ++ +++ ++N
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 427 AMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPR 486
+ + A +F M+ + I P+ + ++ S G +++ +F M+ E G+ P
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV-EEGLTPN 661
Query: 487 HEHYGCMVDLYCRANLLRKAMELIESMPFA---PNVIIWGSLMSACQVHGEV 535
Y ++ +CR+ + KA EL++ M PN + + +++ G++
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 135/338 (39%), Gaps = 38/338 (11%)
Query: 285 VVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV-----CWSAMISGYAESDQPQEALKLFN 339
V+ + GY G +++A F+F + +LV C ++ ++ ++
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRC-KVLLDALLRWNRLDLFWDVYK 210
Query: 340 EMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNA--------- 390
M RN+V D T I A G + + + +K +L+V+ A
Sbjct: 211 GMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMIC 270
Query: 391 ------------LIDMYAKCGNLIRAKEVFENMPRKNVI----SWSSMINAFAMHGYANS 434
LID K L AK + M V ++S +I+ A++
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV 494
A L H M I ++ + S G++E+ + LF MI G+ P+ + Y ++
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI-ASGLIPQAQAYASLI 389
Query: 495 DLYCRANLLRKAMELIESMPFAPNVII----WGSLMSACQVHGEVELGEFAAKQILELEP 550
+ YCR +R+ EL+ M N++I +G+++ G+++ K+++
Sbjct: 390 EGYCREKNVRQGYELLVEMK-KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 551 DHDGAL-VVLSNIYAKERRWNDVGLIRQSMANKGISKE 587
+ + L + + R+ D + + M +GI+ +
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 185/407 (45%), Gaps = 37/407 (9%)
Query: 165 CR--RIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDG 218
CR R+ + V +M+ R D VT+N +I GYC+ GN+ Q L ++ EM P
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 219 VILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLA----RE 274
+ +++ + +GN++ + + GL + + LV+ + G M+ A RE
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 275 LYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK----DLVCWSAMISGYAESDQ 330
+ D S +V A+++G+ G ++DA + + + EK D+V +S ++SG+ S
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 331 PQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNA 390
EAL++ EM + I PD IT S I +A ++ + G A
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 391 LIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEED 446
LI+ Y G+L +A ++ M K +V+++S +IN A L ++ E+
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 447 IEPNGVIFIGVLYACSH---------------AGLVEEGQKLFSSMINEHGIAPRHEHYG 491
P+ V + ++ CS+ G++ E ++F SM+ ++ P Y
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH-KPDGTAYN 644
Query: 492 CMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSACQVHGEV 535
M+ +CRA +RKA L + M F + + +L+ A G+V
Sbjct: 645 IMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 188/424 (44%), Gaps = 21/424 (4%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLI-AMYSACRRIMDARLVFDKMSHR-- 181
K+ S+ S + L I LA GF ++ A + R I A VF +M
Sbjct: 142 KSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQV 201
Query: 182 --DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKA 239
+ T+NI+I G+C +GN D L L+++M+T P+ V T++ + G
Sbjct: 202 SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFK 261
Query: 240 IHEFIMDNGLALSAHLQSALVNMYVNCGAMD----LARELYDKLSSKHLVVSTAMLSGYA 295
+ + GL + + ++N G M + E+ + S V ++ GY
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 296 KHGMVKDARFIFDQIVEKDL----VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQI 351
K G A + +++ L + ++++I ++ A++ ++M++R + P++
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 352 TMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM 411
T + + + G + +A + + NGF S+ NALI+ + G + A V E+M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 412 PRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLV 467
K +V+S+S++++ F + A+ + M E+ I+P+ + + ++
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 468 EEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGS 524
+E L+ M+ G+ P Y +++ YC L KA++L M P+V+ +
Sbjct: 502 KEACDLYEEMLRV-GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 525 LMSA 528
L++
Sbjct: 561 LING 564
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 191/450 (42%), Gaps = 26/450 (5%)
Query: 171 ARLVFDKMS------HRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTV 224
A LVF + + + +++++ Y + D+ L + + P + V
Sbjct: 116 ASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAV 175
Query: 225 LSACGHSG-NLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK- 282
L A S N+S+ + + + ++++ ++ + + L+ + G +D+A L+DK+ +K
Sbjct: 176 LDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKG 235
Query: 283 ---HLVVSTAMLSGYAKHGMVKDA----RFIFDQIVEKDLVCWSAMISGYAESDQPQEAL 335
++V ++ GY K + D R + + +E +L+ ++ +I+G + +E
Sbjct: 236 CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVS 295
Query: 336 KLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMY 395
+ EM R D++T + I G QA +H ++G S+ +LI
Sbjct: 296 FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
Query: 396 AKCGNLIRAKEVFENMPRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNG 451
K GN+ RA E + M + N +++++++ F+ GY N A + M + P+
Sbjct: 356 CKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV 415
Query: 452 VIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRA----NLLRKAM 507
V + ++ G +E+ + M E G++P Y ++ +CR+ LR
Sbjct: 416 VTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 508 ELIESMPFAPNVIIWGSLMSA-CQVHGEVELGEFAAKQILELEPDHDGALVVLSNIYAKE 566
E++E P+ I + SL+ C+ E + + + P + L N Y E
Sbjct: 475 EMVEK-GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 567 RRWNDVGLIRQSMANKGISKEKASSRVEIN 596
+ M KG+ + + V IN
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 96/238 (40%), Gaps = 23/238 (9%)
Query: 154 IQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD 213
+ +G Y + R + +K D +T++ +I G+C+ + LYEEM
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 214 TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAR 273
PD +++A G+L +H +++ G+ S L+N A+
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 274 ELYDKLSSKHLVVS-------------------TAMLSGYAKHGMVKDARFIFDQIVEK- 313
L KL + V S +++ G+ GM+ +A +F+ ++ K
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 314 ---DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQ 368
D ++ MI G+ + ++A L+ EM + +T+++ + A G + +
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 193/450 (42%), Gaps = 55/450 (12%)
Query: 78 PNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGL 137
P P +++L +++S + L+ + G + + S + L
Sbjct: 65 PLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIAL 124
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGY 193
+ G K G+ D + LI + R+ DA + KM D V +N +IDG
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 194 CQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
C+ G + ++L++ M+ + D V ++++ SG S + ++ + +
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAMLSGYAKHGMVKDARFIFDQ 309
+A+++++V G A +LY++++ + + ++++G HG V +A+ + D
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 310 IVEK----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA 365
+V K D+V ++ +I+G+ +S + E KLF EM R +V D IT
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY------------ 352
Query: 366 LAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM-PRKNVISWSSMIN 424
N +I Y + G A+E+F M R N+ ++S ++
Sbjct: 353 -----------------------NTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLY 389
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
M+ A+ LF M++ +IE + + V++ G VE+ LF S+ + G+
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL-SCKGLK 448
Query: 485 PRHEHYGCMVDLYCR------ANLLRKAME 508
P Y M+ +CR ++LL + M+
Sbjct: 449 PDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/353 (18%), Positives = 142/353 (40%), Gaps = 34/353 (9%)
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
S N ++ + L+ +M S P V VLS S N ++ + G+ +
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 256 QSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL 315
+ ++N C +A VV M GY E D+
Sbjct: 107 YNIVINCLCRCSRFVIALS----------VVGKMMKFGY-----------------EPDV 139
Query: 316 VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTY 375
V S++I+G+ + ++ +A+ L ++M+ PD + + I +G + A +
Sbjct: 140 VTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDR 199
Query: 376 ADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAFAMHGY 431
+++G N+L+ G A + +M + NVI+++++I+ F G
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 432 ANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYG 491
+ AM L+ M ++P+ + ++ G V+E +++ M+ + G P Y
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK-GCLPDVVTYN 318
Query: 492 CMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQ 544
+++ +C++ + + +L M A ++ ++ + G + G A Q
Sbjct: 319 TLINGFCKSKRVDEGTKLFREM--AQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 134/350 (38%), Gaps = 57/350 (16%)
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
W S S +E + LF +M +P + +S A + + +
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 378 KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR----KNVISWSSMINAFAMHGYAN 433
G G L N +I+ +C + A V M + +V++ SS+IN F
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 434 SAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINE------------- 480
A++L +M+E P+ VI+ ++ GLV + +LF M +
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 481 ---------------------HGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP---FA 516
I P + ++D++ + +AM+L E M
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 517 PNVIIWGSLMSACQVHGEVELGEFAAKQILELE------PDHDGALVVLSNIYAKERRWN 570
P+V + SL++ +HG V+ AKQ+L+L PD L N + K +R +
Sbjct: 277 PDVFTYNSLINGLCMHGRVD----EAKQMLDLMVTKGCLPDV-VTYNTLINGFCKSKRVD 331
Query: 571 DVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLE 620
+ + + MA +G+ + N + + A R ++EI+ +++
Sbjct: 332 EGTKLFREMAQRGL----VGDTITYNTIIQGYFQAGR-PDAAQEIFSRMD 376
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 189/429 (44%), Gaps = 17/429 (3%)
Query: 78 PNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGL 137
P P ++L ++++ ++LY K+ +G + S L L L
Sbjct: 75 PIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLAL 134
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSH----RDAVTWNIMIDGY 193
+ G KLGF L+ + R +A + D M + V +N +I+G
Sbjct: 135 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 194
Query: 194 CQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSA 253
C++ + + L+++ M+ + D V T++S +SG + + ++ + +
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 254
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLV----VSTAMLSGYAKHGMVKDARFIFDQ 309
+AL++ +V G + AR LY ++ + +V ++++G+ HG + DA+++FD
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 310 IVEK----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGA 365
+V K D+V ++ +I+G+ +S + ++ +KLF EM + +V D T + I G
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 366 LAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSS 421
L A+ + G + N L+D G + +A + E++ + ++I+++
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
+I A LF + + ++P+ + +I ++ GL E KL M E
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM-KED 493
Query: 482 GIAPRHEHY 490
G P Y
Sbjct: 494 GFMPSERIY 502
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 155/379 (40%), Gaps = 54/379 (14%)
Query: 199 YDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSA 258
+D L+ EM S P V VL+ ++ + + G++ + +
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 259 LVNMYVNCGAMDLARELYDKLSS----KHLVVSTAMLSGYAKHGMVKDARFIFDQI---- 310
L++ + C + LA L K+ +V ++L+G+ + ++A + D +
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR 370
++V ++ +I+G ++ AL++F M+ + I D +T + IS +N G A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAF 426
+ K ++ ALID + K GNL+ A+ +++ M R+ NV +++S+IN F
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 427 AMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH----- 481
+HG A +F M + P+ V + ++ + VE+G KLF M +
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 482 -----------------------------GIAPRHEHYGCMVDLYCRANLLRKAMELIES 512
G++P Y ++D C + KA+ ++E
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 513 MP--------FAPNVIIWG 523
+ N+II G
Sbjct: 420 LQKSEMDVDIITYNIIIQG 438
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 172/362 (47%), Gaps = 16/362 (4%)
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSH----RDAVTWNIMI 190
L L I G KLG+ D L+ + R+ DA + DKM D V +N +I
Sbjct: 138 LALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAII 197
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
D C++ + ++E++ +P+ V +++ +S S + ++ +
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLS----SKHLVVSTAMLSGYAKHGMVKDARFI 306
+ SAL++ +V G + A+EL++++ +V +++++G H + +A +
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 307 FDQIVEK----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACAN 362
FD +V K D+V ++ +I+G+ ++ + ++ +KLF EM R +V + +T + I
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 363 VGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVIS 418
G + +A+ + D G + N L+ G L +A +FE+M ++ ++++
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 419 WSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI 478
++++I G A +LF + + ++P+ V + ++ GL+ E + L++ M
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Query: 479 NE 480
E
Sbjct: 498 QE 499
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 170/373 (45%), Gaps = 24/373 (6%)
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSAC----GHSGNLSYGKAIHEFIMDNGLALSAHL 255
+ + L+ +M S P V +LSA + +S GK + + N L +
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL----YT 122
Query: 256 QSALVNMYVNCGAMDLARELYDKL----SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
+ ++N + C + LA + K+ V ++++G+ + V DA + D++V
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 312 E----KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
E D+V ++A+I ++ + +A F E++ + I P+ +T + ++ N +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 368 QARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR----KNVISWSSMI 423
A + + K ++ +AL+D + K G ++ AKE+FE M R +++++SS+I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
N +H + A +F M + + V + ++ A VE+G KLF M ++ G+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGL 361
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESMPF---APNVIIWGSLMSACQVHGEVELGEF 540
Y ++ + +A + KA E M F +P++ + L+ +GE+E
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 541 AAKQILELEPDHD 553
+ + + E D D
Sbjct: 422 IFEDMQKREMDLD 434
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 171/384 (44%), Gaps = 17/384 (4%)
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKM----SHRDAVTWNIMIDGYCQSGNYDQ 201
LG +D + +I + C ++ A + KM D VT +++G+C+
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 202 VLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVN 261
+ L ++M KPD V ++ + + ++ + I G+ + +ALVN
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 262 MYVNCGAM-DLARELYDKLSSK---HLVVSTAMLSGYAKHGMVKDARFIFDQIV----EK 313
N D AR L D + K +++ +A+L + K+G V +A+ +F+++V +
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
D+V +S++I+G D+ EA ++F+ M + + D ++ + I+ + +
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 374 TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP----RKNVISWSSMINAFAMH 429
+ G + N LI + + G++ +A+E F M ++ +++ ++ +
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 430 GYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEH 489
G A+ +F M++ +++ + V + V+ G VEE LF S+ + G+ P
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLKPDIVT 472
Query: 490 YGCMVDLYCRANLLRKAMELIESM 513
Y M+ C LL + L M
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKM 496
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 112/243 (46%), Gaps = 21/243 (8%)
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQVLKLY 206
D F++ G ++++A+ +F++M D VT++ +I+G C D+ +++
Sbjct: 268 DAFVKNG---------KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 207 EEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNC 266
+ M + D V T+++ + + G + + GL + + L+ +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 267 GAMDLARELYDKLS----SKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK----DLVCW 318
G +D A+E + ++ S + +L G +G ++ A IF+ + ++ D+V +
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 319 SAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADK 378
+ +I G ++ + +EA LF + L+ + PD +T + +S G L + ++T +
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 379 NGF 381
G
Sbjct: 499 EGL 501
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 174/381 (45%), Gaps = 21/381 (5%)
Query: 152 PFIQTGLIAMYSACRRIMDARLVFDKMSHRD-------AVTWNIMIDGYCQSGNYDQVLK 204
P + T + + C+R D L F+ ++ + + +N +IDG C+ + D L
Sbjct: 219 PDLVTYGVVVNGLCKR-GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 205 LYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYV 264
L++EM+T +P+ V +++S + G S + +++ + SAL++ +V
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 265 NCGAMDLARELYDKLSSK----HLVVSTAMLSGYAKHGMVKDARFIFDQIVEK----DLV 316
G + A +LYD++ + +V +++++G+ H + +A+ +F+ +V K D+V
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 317 CWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYA 376
++ +I G+ + + +E +++F EM R +V + +T I G A+ I
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAFAMHGYA 432
+G ++ N L+D K G L +A VFE + R + +++ MI G
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
+LF + + ++P+ V + ++ G EE LF M E G P Y
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM-KEDGTLPNSGCYNT 576
Query: 493 MVDLYCRANLLRKAMELIESM 513
++ R + ELI+ M
Sbjct: 577 LIRARLRDGDREASAELIKEM 597
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 166/370 (44%), Gaps = 16/370 (4%)
Query: 184 VTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEF 243
VT + +++GYC S + + L ++M + +P+ V T++ S A+ +
Sbjct: 152 VTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211
Query: 244 IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL----VVSTAMLSGYAKHGM 299
++ G +VN G DLA L +K+ L ++ ++ G K+
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 300 VKDARFIFDQI----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLS 355
+ DA +F ++ + ++V +S++IS + +A +L ++M R I PD T +
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 356 AISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK- 414
I A G L +A ++ K S+ ++LI+ + L AK++FE M K
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 415 ---NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQ 471
+V++++++I F + M +F M + + N V + ++ AG + Q
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 472 KLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAM---ELIESMPFAPNVIIWGSLMSA 528
++F M+++ G+ P Y ++D C+ L KAM E ++ P + + ++
Sbjct: 452 EIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 529 CQVHGEVELG 538
G+VE G
Sbjct: 511 MCKAGKVEDG 520
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 155/354 (43%), Gaps = 16/354 (4%)
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSAL 259
D + L+ EM S P + +LSA ++ E + + G+ + + S L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 260 VNMYVNCGAMDLARELYDKL----SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV---- 311
+N + + LA + K+ ++V +++L+GY + +A + DQ+
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
+ + V ++ +I G ++ EA+ L + M + PD +T ++ G A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP----RKNVISWSSMINAFA 427
+ ++ + + N +ID K ++ A +F+ M R NV+++SS+I+
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 428 MHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
+G + A L M E I P+ F ++ A G + E +KL+ M+ + I P
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV-KRSIDPSI 361
Query: 488 EHYGCMVDLYCRANLLRKAMELIESMPFA---PNVIIWGSLMSACQVHGEVELG 538
Y +++ +C + L +A ++ E M P+V+ + +L+ + VE G
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 172/385 (44%), Gaps = 39/385 (10%)
Query: 147 GFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSH----RDAVTWNIMIDGYCQSG-NYDQ 201
G+ + + + LI+ Y +A VF+ M + VT+N +ID + G + Q
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 202 VLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVN 261
V K ++EM+ + +PD + ++L+ C G + + + + + + + L++
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 262 MYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAM 321
G MDLA E+ ++ K ++ ++V +S +
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIM---------------------------PNVVSYSTV 415
Query: 322 ISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGF 381
I G+A++ + EAL LF EM+ I D+++ + +S VG +A I G
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 382 GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAFAMHGYANSAMN 437
+ + NAL+ Y K G K+VF M R+ N++++S++I+ ++ G AM
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLY 497
+F K + + V++ ++ A GLV L M E GI+P Y ++D +
Sbjct: 536 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAF 594
Query: 498 CRANLLRKAMELIE--SMPFAPNVI 520
R+ + ++ + S+PF+ + +
Sbjct: 595 GRSATMDRSADYSNGGSLPFSSSAL 619
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 24/281 (8%)
Query: 357 ISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP---- 412
IS G + A+ I A G+G ++ +ALI Y + G A VF +M
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL 299
Query: 413 RKNVISWSSMINAFAMHGYA-NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQ 471
R N+++++++I+A G F M+ ++P+ + F +L CS GL E +
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 472 KLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFA---PNVIIWGSLMSA 528
LF M N I Y ++D C+ + A E++ MP PNV+ + +++
Sbjct: 360 NLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 529 CQVHGEVE--LGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISK 586
G + L F + L + D +LS IY K R + I + MA+ GI K
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS-IYTKVGRSEEALDILREMASVGIKK 477
Query: 587 EKASSRVEINNEVHVFMMADRYHKQSREIYKKLEEVVSELK 627
+ + + Y KQ + Y ++++V +E+K
Sbjct: 478 DVVTYNALLGG----------YGKQGK--YDEVKKVFTEMK 506
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 137/306 (44%), Gaps = 22/306 (7%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
+ V+++ +IDG+ ++G +D+ L L+ EM+ D V T+LS G I
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKH----LVVSTAMLSGYAKH 297
+ G+ +AL+ Y G D ++++ ++ +H L+ + ++ GY+K
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 298 GMVKDARFIFDQI----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM 353
G+ K+A IF + + D+V +SA+I ++ A+ L +EM I P+ +T
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
S I A + ++ AD + G ++AL + GN R ++F +
Sbjct: 588 NSIIDAFGRSATMDRS------ADYSNGGSLPFSSSALSALTETEGN--RVIQLFGQLTT 639
Query: 414 KNVISWSSMINAFAMHGYANSA--MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQ 471
++ ++ G + + +F +M + +I+PN V F +L ACS E+
Sbjct: 640 ES----NNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDAS 695
Query: 472 KLFSSM 477
L +
Sbjct: 696 MLLEEL 701
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 165/405 (40%), Gaps = 96/405 (23%)
Query: 175 FDKMSHR----DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGH 230
FD+M D +T+N ++ + G ++ L++EM + D T+L A
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 231 SGNLSYGKAIH-----EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLV 285
G + I + IM N ++ S +++ + G D A L+ ++ ++L
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSY-----STVIDGFAKAGRFDEALNLFGEM--RYLG 439
Query: 286 VS------TAMLSGYAKHGMVKDARFIFDQI----VEKDLVCWSAMISGYAESDQPQEAL 335
++ +LS Y K G ++A I ++ ++KD+V ++A++ GY + + E
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 336 KLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMY 395
K+F EM+ +++P+ +T + LID Y
Sbjct: 500 KVFTEMKREHVLPNLLTY-----------------------------------STLIDGY 524
Query: 396 AKCGNLIRAKEVFENMP----RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNG 451
+K G A E+F R +V+ +S++I+A +G SA++L M +E I PN
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 452 VIFIGVLYACSHAGLVE------------------------EGQK---LFSSMINEHGIA 484
V + ++ A + ++ EG + LF + E
Sbjct: 585 VTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNR 644
Query: 485 PRHEHYGCMVDLYCRANLLRKAMELIESMPFAPNVIIWGSLMSAC 529
+ M +L C + RK +L PNV+ + ++++AC
Sbjct: 645 TTKDCEEGMQELSCILEVFRKMHQL----EIKPNVVTFSAILNAC 685
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 165/422 (39%), Gaps = 75/422 (17%)
Query: 147 GFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQV 202
G D L+A+ S AR +FD+M++R D ++N ++D C+ G D
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 203 LKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNM 262
++ +M P+ V TV+ +G + + G+AL + L+++
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 453
Query: 263 YVNCG----AMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI----VEKD 314
Y G A+D+ RE+ K +V A+L GY K G + + +F ++ V +
Sbjct: 454 YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 513
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHT 374
L+ +S +I GY++ +EA+++F E + + D + + I A G + A +
Sbjct: 514 LLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLID 573
Query: 375 YADKNG--------------FGRSLSVN--------------------------NALIDM 394
K G FGRS +++ N +I +
Sbjct: 574 EMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQL 633
Query: 395 YAKCGNLIRAK----------------EVFENMP----RKNVISWSSMINAFAMHGYANS 434
+ + + EVF M + NV+++S+++NA +
Sbjct: 634 FGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFED 693
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV 494
A L ++ D + GV+ G+L + + Q LF +NE + Y +
Sbjct: 694 ASMLLEELRLFDNKVYGVVH-GLLMG-QRENVWLQAQSLFDK-VNEMDGSTASAFYNALT 750
Query: 495 DL 496
D+
Sbjct: 751 DM 752
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 8/179 (4%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMS----HR 181
+KA L + G LG D L+++Y+ R +A + +M+ +
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D VT+N ++ GY + G YD+V K++ EMK P+ + T++ G I
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLS----SKHLVVSTAMLSGYAK 296
GL L SAL++ G + A L D+++ S ++V +++ + +
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/487 (20%), Positives = 203/487 (41%), Gaps = 56/487 (11%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASK 145
N LL + +S P+ + + ++ G A ++ L +E+ ++
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 146 LGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQ 201
G D F T L++ + ++ A +F++M + + T+N I Y G + +
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 202 VLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVN 261
++K+++E+ PD V T+L+ G +G S + + + G + L++
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497
Query: 262 MYVNCG----AMDLARELYDKLSSKHLVVSTAMLSGYAKHGM----------VKDARF-- 305
Y CG AM + R + D + L +L+ A+ GM ++D R
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 306 ---------------------------IFDQIVEKDLVCWSAMISGYAESDQPQEALKLF 338
++ ++E V ++ ++ D EA + F
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC 398
+E++ R PD T+ S +S +A+A + Y + GF S++ N+L+ M+++
Sbjct: 618 SELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRS 677
Query: 399 GNLIRAKEVFENMPRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIF 454
+ +++E+ + K ++IS++++I A+ + A +F M+ I P+ + +
Sbjct: 678 ADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITY 737
Query: 455 IGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM- 513
+ + + + EE + MI +HG P Y +VD YC+ N +A +E +
Sbjct: 738 NTFIGSYAADSMFEEAIGVVRYMI-KHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Query: 514 ---PFAP 517
P AP
Sbjct: 797 NLDPHAP 803
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 170/405 (41%), Gaps = 45/405 (11%)
Query: 158 LIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD 213
+I+M R+ A +F+ + D ++ +I + SG Y + + ++++M+
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 214 TKPDGVILCTVLSACGHSGNLSYGK--AIHEFIMDNGLALSAHLQSALVNMYVNCGAMDL 271
KP + +L+ G G + K ++ E + +G+A A+ + L+
Sbjct: 239 CKPTLITYNVILNVFGKMGT-PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 272 ARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQP 331
A ++++++ K A F +D+ V ++A++ Y +S +P
Sbjct: 298 AAQVFEEM---------------------KAAGFSYDK------VTYNALLDVYGKSHRP 330
Query: 332 QEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNAL 391
+EA+K+ NEM L P +T S ISA A G L +A + + G + L
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 392 IDMYAKCGNLIRAKEVFENMP----RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDI 447
+ + + G + A +FE M + N+ ++++ I + G M +F + +
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 448 EPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAM 507
P+ V + +L G+ E +F M G P E + ++ Y R +AM
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 508 ELIESMPFA---PNVIIWGSLMSACQVHGEVELGEFAAKQILELE 549
+ M A P++ + ++++A G E E K + E+E
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE---KVLAEME 551
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 190/404 (47%), Gaps = 20/404 (4%)
Query: 129 KASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAV 184
++S YL G KLGF D T LI + R+ +A + ++M D V
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVV 178
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
+ +ID C++G+ + L L+++M+ +PD V+ ++++ +SG ++ +
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLS----SKHLVVSTAMLSGYAKHGMV 300
+ +AL++ +V G A ELY+++ + ++ T++++G+ G V
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 301 KDARFIFDQIVEK----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSA 356
+AR +F + K D+V ++++I+G+ + + +A+K+F EM + + + IT +
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 357 ISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-- 414
I VG A+ + ++ G ++ N L+ G + +A +FE+M ++
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 415 -----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEE 469
N+ +++ +++ +G A+ +F M++ +++ + + ++ AG V+
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 470 GQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
LF S+ ++ G+ P Y M+ R L +A L M
Sbjct: 479 AVNLFCSLPSK-GVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 154/344 (44%), Gaps = 13/344 (3%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D V +N +IDG C+ + D L L+ EM +PD +++S + G S +
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAMLSGYAKH 297
+++ + + SAL++ +V G + A +LYD++ + + +++++G+ H
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 298 GMVKDARFIFDQIVEKD----LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM 353
+ +A+ +F+ ++ KD +V +S +I G+ ++ + +E ++LF EM R +V + +T
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
+ I A+ + G ++ N L+D K G L +A VFE + R
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 414 K----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEE 469
++ +++ MI G LF + + + PN + + ++ G EE
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 470 GQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
L M E G P Y ++ R + ELI+ M
Sbjct: 557 ADSLLKKM-KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 45/441 (10%)
Query: 126 AVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRR--IMDARLVFDKMS---- 179
AV+K + L + + LG D + + I + CRR + A V KM
Sbjct: 92 AVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF--CRRSQLSLALAVLAKMMKLGY 149
Query: 180 HRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKA 239
D VT + +++GYC S + L ++M KPD T++ S A
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 240 IHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGM 299
+ + ++ G +VN G +DLA L K+
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK---------------- 253
Query: 300 VKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISA 359
+E D+V ++ +I G + +AL LF EM + I PD T S IS
Sbjct: 254 -----------IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 360 CANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----N 415
N G + A + + + ++ +ALID + K G L+ A+++++ M ++ +
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 416 VISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFS 475
+ ++SS+IN F MH + A ++F M +D PN V + ++ A VEEG +LF
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 476 SMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSACQVH 532
M ++ G+ Y ++ + +A A + + M PN++ + L+ +
Sbjct: 423 EM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 533 GEV--ELGEFAAKQILELEPD 551
G++ + F Q +EPD
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPD 502
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/516 (20%), Positives = 219/516 (42%), Gaps = 61/516 (11%)
Query: 78 PNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGL 137
P P N+LL +++ + + L ++++ +G + S L L L
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKM------------------- 178
+ KLG+ D + L+ Y +RI DA + D+M
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 179 --------------------SHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDG 218
D VT+ +++G C+ G+ D L L ++M+ + D
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 258
Query: 219 VILCTVLSACGHSGNLSYGKAIHEFI-MDN-GLALSAHLQSALVNMYVNCGAM-DLAREL 275
VI T++ ++ A++ F MDN G+ S+L++ N G D +R L
Sbjct: 259 VIYNTIIDGLCKYKHMD--DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 276 YDKLSSK---HLVVSTAMLSGYAKHGMVKDARFIFDQIVEK----DLVCWSAMISGYAES 328
D + K ++V +A++ + K G + +A ++D+++++ D+ +S++I+G+
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 329 DQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVN 388
D+ EA +F M ++ P+ +T + I + + + + G +
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 389 NALIDMYAKCGNLIRAKEVFENM----PRKNVISWSSMINAFAMHGYANSAMNLFHRMKE 444
LI + + + A+ VF+ M N+++++ +++ +G AM +F ++
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 445 EDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLR 504
+EP+ + ++ AG VE+G +LF ++ + G++P Y M+ +CR
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 505 KAMELIESM----PFAPNVIIWGSLMSACQVHGEVE 536
+A L++ M P PN + +L+ A G+ E
Sbjct: 556 EADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDRE 590
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 192/424 (45%), Gaps = 15/424 (3%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D T+NI+I + ++ + ++ ++EMK KPD V T+L A + + +
Sbjct: 366 DTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLI 425
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVS---TAMLSGYAKHG 298
+ D+ + + + QSAL MYV ++ + + + + S +A + Y + G
Sbjct: 426 AEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERG 485
Query: 299 MVKDARFIF---DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLS 355
+ +A +F ++ ++ ++ ++ MI Y S ++A +LF M + PD+ T +
Sbjct: 486 YLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNT 545
Query: 356 AISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKN 415
+ A+ + R + G+ A+I + K G L A+EV++ M N
Sbjct: 546 LVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYN 605
Query: 416 ----VISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQ 471
V+ + +INAFA G AM+ MKE I N VI+ ++ + G ++E +
Sbjct: 606 IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE 665
Query: 472 KLFSSMINEHGIAPRHEHY--GCMVDLYCRANLLRKAMELIESMP--FAPNVIIWGSLMS 527
++ ++ + Y CM++LY +++RKA + +SM N + ++
Sbjct: 666 AIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLC 725
Query: 528 ACQVHGEVELGEFAAKQILELEPDHDG-ALVVLSNIYAKERRWNDVGLIRQSMANKGISK 586
+ +G E AKQ+ E++ D + + ++A + R+ + + M + GI
Sbjct: 726 MYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQP 785
Query: 587 EKAS 590
+ ++
Sbjct: 786 DDST 789
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/477 (20%), Positives = 182/477 (38%), Gaps = 66/477 (13%)
Query: 86 NQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLA-- 143
N +LR+L ++ + L+ ++ R G SK GL++H L
Sbjct: 191 NIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKG-----GLKVHALCWL 245
Query: 144 ---SKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRD----------AVTWNIMI 190
SK+G D ++ MY R A F K S + + T+N MI
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMI 305
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
D Y +SG + + ++ M P V T++ G++G L
Sbjct: 306 DTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQL---------------- 349
Query: 251 LSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQI 310
+ S + M ++C + L +K+ + A Y K + D
Sbjct: 350 --GEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERA--GAYFKE--------MKDDG 397
Query: 311 VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR 370
++ D V + ++ ++ +EA L EM N+ D+ T SA++ + +
Sbjct: 398 LKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQ-SALTRMYVEAEMLEKS 456
Query: 371 W-----IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVF---ENMPRKNVISWSSM 422
W H + + G S A ID Y + G L A+ VF + + ++ VI ++ M
Sbjct: 457 WSWFKRFHVAGNMSSEGYS-----ANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVM 511
Query: 423 INAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHG 482
I A+ + A LF M + P+ + ++ + A + +G+ M E G
Sbjct: 512 IKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKM-RETG 570
Query: 483 IAPRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSACQVHGEVE 536
Y ++ + + L A E+ + M P+V+++G L++A G V+
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/354 (18%), Positives = 154/354 (43%), Gaps = 39/354 (11%)
Query: 170 DARLVF---DKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLS 226
+A VF +++ R + +N+MI Y S + ++ +L+E M + PD T++
Sbjct: 489 EAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQ 548
Query: 227 ACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVV 286
+ G+ E + + G A+++ +V G +++A E+Y ++ +
Sbjct: 549 ILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYN--- 605
Query: 287 STAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI 346
+E D+V + +I+ +A++ Q+A+ M+ I
Sbjct: 606 ------------------------IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 347 VPDQITMLSAISACANVGALAQARWIH----TYADKNGFGRSLSVNNALIDMYAKCGNLI 402
+ + S I VG L +A I+ +K + + +N +I++Y++ +
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQY-PDVYTSNCMINLYSERSMVR 700
Query: 403 RAKEVFENMPRK---NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLY 459
+A+ +F++M ++ N +++ M+ + +G A + +M+E I + + + VL
Sbjct: 701 KAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLG 760
Query: 460 ACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
+ G +E + F M++ GI P + + + + + +KA+ IE +
Sbjct: 761 LFALDGRFKEAVETFKEMVS-SGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEI 813
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 136/308 (44%), Gaps = 24/308 (7%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR--- 181
K+ KA L+ + +G+ D L+ + ++ R +KM
Sbjct: 519 KSCEKACELFESMMSYGVTP------DKCTYNTLVQILASADMPHKGRCYLEKMRETGYV 572
Query: 182 -DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAI 240
D + + +I + + G + ++Y+EM + +PD V+ +++A +GN+ +
Sbjct: 573 SDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSY 632
Query: 241 HEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL-------SSKHLVVSTAMLSG 293
E + + G+ ++ + ++L+ +Y G +D A +Y KL + S M++
Sbjct: 633 VEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINL 692
Query: 294 YAKHGMVKDARFIFD---QIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQ 350
Y++ MV+ A IFD Q E + ++ M+ Y ++ + +EA ++ +M+ I+ D
Sbjct: 693 YSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDP 752
Query: 351 ITMLSAISACANVGALAQARWIHTYAD--KNGFGRSLSVNNALIDMYAKCGNLIRAKEVF 408
++ S + A G +A + T+ + +G S +L + K G +A
Sbjct: 753 LSYNSVLGLFALDGRFKEA--VETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKI 810
Query: 409 ENMPRKNV 416
E + +K +
Sbjct: 811 EEIRKKEI 818
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 178/411 (43%), Gaps = 21/411 (5%)
Query: 146 LGFHSDPFIQTGLIAMYSACRR--IMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNY 199
+G + P + T I + C+ + AR +F++M R D VT+N MIDG+ + G
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSAL 259
D + +EEMK +PD + +++ G L G + + NGL + S L
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 260 VNMYVNCGAMDLARELYDKLSSKHLV----VSTAMLSGYAKHGMVKDARFIFDQI----V 311
V+ + G M A + Y + LV T+++ K G + DA + +++ V
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 312 EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
E ++V ++A+I G ++++ +EA +LF +M ++P+ + + I + +A
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP----RKNVISWSSMINAFA 427
+ G L + I + AK V M + N + ++++++A+
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 428 MHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
G ++L MKE DIE V F ++ LV + F+ + N+ G+
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 488 EHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSACQVHGEV 535
+ M+D C+ N + A L E M P+ + SLM G V
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 133/326 (40%), Gaps = 13/326 (3%)
Query: 99 QNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGL 158
Q + Y +RRVG A K L + ++G + T L
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 159 IAMYSACRRIMDARLVFDKMSHRDAV----TWNIMIDGYCQSGNYDQVLKLYEEMKTSDT 214
I R+ +A +F KM + ++N +I G+ ++ N D+ L+L E+K
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 215 KPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARE 274
KPD ++ T + + K + + + G+ ++ + + L++ Y G
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 275 LYDKLSSKHLVVSTA----MLSGYAKHGMVKDARFIFDQI-----VEKDLVCWSAMISGY 325
L D++ + V+ ++ G K+ +V A F++I ++ + ++AMI G
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623
Query: 326 AESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSL 385
+ +Q + A LF +M + +VPD+ S + G + +A + + G L
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 683
Query: 386 SVNNALIDMYAKCGNLIRAKEVFENM 411
+L+ + C L +A+ E M
Sbjct: 684 LAYTSLVWGLSHCNQLQKARSFLEEM 709
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 135/306 (44%), Gaps = 18/306 (5%)
Query: 104 LYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYS 163
L+ K+ G KA + LE+ G D + I
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518
Query: 164 ACRRIMDARLVFDKMSH----RDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGV 219
+ +I A++V ++M +++ + ++D Y +SGN + L L +EMK D + V
Sbjct: 519 SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Query: 220 ILCTVLSACGHSGNLSYGKAIHEFIM---DNGLALSAHLQSALVNMYVNCGAMDLARELY 276
C ++ G N KA+ F D GL +A + +A+++ ++ A L+
Sbjct: 579 TFCVLID--GLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLF 636
Query: 277 DKLSSKHLV----VSTAMLSGYAKHGMVKDARFIFDQIVE----KDLVCWSAMISGYAES 328
+++ K LV T+++ G K G V +A + D++ E DL+ +++++ G +
Sbjct: 637 EQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHC 696
Query: 329 DQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVN 388
+Q Q+A EM I PD++ +S + +G + +A + +Y K+ S +
Sbjct: 697 NQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTS-DND 755
Query: 389 NALIDM 394
NAL +M
Sbjct: 756 NALPNM 761
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 105/269 (39%), Gaps = 48/269 (17%)
Query: 257 SALVNMYVNCGAMDLARELYDKLSSKHLVVST----AMLSGYAKHGMVKDARFIFDQIV- 311
AL ++ ++ G ++ A + + K+ + T +L +AK G D + F ++
Sbjct: 196 DALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIG 255
Query: 312 ---EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQ 368
+ ++ MI + + A LF EM+ R +VPD +T
Sbjct: 256 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY--------------- 300
Query: 369 ARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP----RKNVISWSSMIN 424
N++ID + K G L FE M +VI+++++IN
Sbjct: 301 --------------------NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALIN 340
Query: 425 AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIA 484
F G + + MK ++PN V + ++ A G++++ K + M G+
Sbjct: 341 CFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM-RRVGLV 399
Query: 485 PRHEHYGCMVDLYCRANLLRKAMELIESM 513
P Y ++D C+ L A L M
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 187/427 (43%), Gaps = 65/427 (15%)
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGLI---AMYSACRRIMD-------ARLVFDKMSH 180
+AL GL ++G S D ++TG Y ++M A + KM
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 181 R----DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSY 236
R DAV ++I+IDG C+ G+ D L+ EM+ K D +I T++ ++G
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 237 GKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL----VVSTAMLS 292
G + ++ + SAL++ +V G + A EL+ ++ + + V T+++
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 293 GYAKHGMVKDARFIFDQIVEK----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVP 348
G+ K + A + D +V K ++ ++ +I+GY +++ + L+LF +M LR +V
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420
Query: 349 DQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVF 408
D +T N LI + + G L AKE+F
Sbjct: 421 DTVTY-----------------------------------NTLIQGFCELGKLEVAKELF 445
Query: 409 ENM----PRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHA 464
+ M R +++S+ +++ +G A+ +F ++++ +E + I+ +++ +A
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 465 GLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP---FAPNVII 521
V++ LF S+ G+ P + Y M+ C+ L +A L M +PN
Sbjct: 506 SKVDDAWDLFCSL-PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 522 WGSLMSA 528
+ L+ A
Sbjct: 565 YNILIRA 571
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 159/372 (42%), Gaps = 20/372 (5%)
Query: 161 MYSACRRIMDARLVFDKMS-------HRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD 213
M + C R L F M D VT++ +I+G C G + L+L + M
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 214 TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAR 273
KP + L +++ +G +S + + +++ G + ++ + G LA
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 274 ELYDKLSSKHL----VVSTAMLSGYAKHGMVKDARFIFDQI----VEKDLVCWSAMISGY 325
EL K+ + + V + ++ G K G + +A +F+++ + D++ ++ +I G+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 326 AESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSL 385
+ + + KL +M R I PD + + I G L +A +H + G
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 386 SVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAFAMHGYANSAMNLFHR 441
+LID + K L +A + + M K N+ +++ +IN + + + LF +
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 442 MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRAN 501
M + + V + ++ G +E ++LF M++ + P Y ++D C
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKILLDGLCDNG 471
Query: 502 LLRKAMELIESM 513
KA+E+ E +
Sbjct: 472 EPEKALEIFEKI 483
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 134/314 (42%), Gaps = 47/314 (14%)
Query: 147 GFHSDPFIQTGLIAMYSACRRIMD-ARLVFDKMSHR---DAVTWNIMIDGYCQSGNYDQV 202
GF +D I T LI + R D A+L+ D + + D V ++ +ID + + G +
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 203 LKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNM 262
+L++EM PD V +++ L + + ++ G + + L+N
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 263 YVNCGAMDLARELYDKLSSKHLVVST----AMLSGYAKHGMVKDARFIFDQIVEK----D 314
Y +D EL+ K+S + +V T ++ G+ + G ++ A+ +F ++V + D
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 315 LVCWSAMISGYAESDQPQEALKLFNEMQ-------------------------------- 342
+V + ++ G ++ +P++AL++F +++
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 343 ---LRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCG 399
L+ + PD T I G+L++A + +++G + N LI + G
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEG 576
Query: 400 NLIRAKEVFENMPR 413
+ ++ ++ E + R
Sbjct: 577 DATKSAKLIEEIKR 590
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 31/243 (12%)
Query: 158 LIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD 213
LI Y I D +F KMS R D VT+N +I G+C+ G + +L++EM +
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 214 TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAR 273
+PD V +L +G I E I + + L + + +++ N +D A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 274 ELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLVCWSAMISGYAESDQPQE 333
+L+ L K V+ D+ ++ MI G + E
Sbjct: 513 DLFCSLPLKG---------------------------VKPDVKTYNIMIGGLCKKGSLSE 545
Query: 334 ALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALID 393
A LF +M+ P+ T I A G ++ + + GF S ++D
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Query: 394 MYA 396
M +
Sbjct: 606 MLS 608
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 138/293 (47%), Gaps = 16/293 (5%)
Query: 259 LVNMYVNCGAMDLARELYDKL----SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV--- 311
L+N + C + LA K+ +V ++L+G+ + V DA ++FDQ+V
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 312 -EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR 370
+ ++V ++ +I G +S Q AL L N M+ I PD +T S IS + G + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 371 WIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAF 426
+ + K + NALID K G + A+E +E M R+ +++++S +I
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 427 AMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPR 486
M+ + A +F M + P+ V + ++ + VE G KLF M ++ G+
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM-SQRGVVRN 360
Query: 487 HEHYGCMVDLYCRANLLRKAMELIESMPFA---PNVIIWGSLMSACQVHGEVE 536
Y ++ YCRA L A E+ M F PN+I + L+ +G++E
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 179/426 (42%), Gaps = 21/426 (4%)
Query: 78 PNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGL 137
P P ++LL +S+ ++L+++++ +G + S L L L
Sbjct: 77 PLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLAL 136
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACR--RIMDARLVFDKMS----HRDAVTWNIMID 191
G KLG +P I T + CR R+ DA +FD+M + V +N +ID
Sbjct: 137 SFLGKMIKLG--HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
G C+S D L L M+ PD V +++S SG S + + +
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHL----VVSTAMLSGYAKHGMVKDARFIF 307
+AL++ V G + A E Y+++ + L V + ++ G + + +A +F
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 308 DQIVEK----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV 363
+V K D+V +S +I+GY +S + + +KLF EM R +V + +T I
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISW 419
G L A I G ++ N L+ G + +A + +M + +++++
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 420 SSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMIN 479
+ +I G A +++ + + + P+ + ++ GL E LF M
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM-K 493
Query: 480 EHGIAP 485
E GI P
Sbjct: 494 EDGILP 499
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 156/384 (40%), Gaps = 20/384 (5%)
Query: 85 CNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLAS 144
CN LL R L K+ ++G + +Y L +
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 145 KLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYD 200
+G+ + I +I +++ +A + ++M D VT+N +I G C SG +
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 201 QVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALV 260
++ M + PD ++ AC G +S + +E ++ L S L+
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 261 NMYVNCGAMDLARELYDKLSSK----HLVVSTAMLSGYAKHGMVKDARFIFDQI----VE 312
+D A E++ + SK +V + +++GY K V+ +F ++ V
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
++ V ++ +I GY + + A ++F M + P+ IT + + G + +A I
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 373 HTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFEN------MPRKNVISWSSMINAF 426
KNG + N +I K G + A +++ + MP ++ ++++M+
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP--DIWTYTTMMLGL 476
Query: 427 AMHGYANSAMNLFHRMKEEDIEPN 450
G A LF +MKE+ I PN
Sbjct: 477 YKKGLRREADALFRKMKEDGILPN 500
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 16/232 (6%)
Query: 332 QEALKLFNEM-QLRNI--VPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVN 388
++L LF M Q R + + D +LSAIS + ++ G +L
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVI---YLWEQMQMLGIPHNLCTC 119
Query: 389 NALIDMYAKCGNLIRAKEVFENMPR----KNVISWSSMINAFAMHGYANSAMNLFHRMKE 444
N L++ + +C L A M + +++++ S++N F A+ +F +M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 445 EDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLR 504
+PN VI+ ++ + V+ L + M + GI P Y ++ C +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 505 KAMELIESMP---FAPNVIIWGSLMSACQVHGEV-ELGEFAAKQILE-LEPD 551
A ++ M P+V + +L+ AC G V E EF + I L+PD
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/482 (20%), Positives = 205/482 (42%), Gaps = 26/482 (5%)
Query: 158 LIAMYSACRRIMDARLVFDKMSH----RDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD 213
L + C + A +VF + + ++NI+I CQ G + L M+
Sbjct: 217 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 276
Query: 214 TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAR 273
PD + TV++ G L + E + GL ++++ +++ + + A
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 274 ELYDKLSSKHL----VVSTAMLSGYAKHGMVKDARFIFDQI----VEKDLVCWSAMISGY 325
E + ++ + + VV T ++ G+ K G ++ A F ++ + D++ ++A+ISG+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 326 AESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSL 385
+ EA KLF+EM + + PD +T I+ G + A +H + + G ++
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 386 SVNNALIDMYAKCGNLIRAKEVFENMPR----KNVISWSSMINAFAMHGYANSAMNLFHR 441
LID K G+L A E+ M + N+ +++S++N G A+ L
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 442 MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRAN 501
+ + + V + ++ A +G +++ Q++ M+ + G+ P + +++ +C
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHG 575
Query: 502 LLRKAMELIESM---PFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVV 558
+L +L+ M APN + SL+ + ++ K + DG
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 559 -LSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYK 617
L + K R + + Q M KG S ++ V I + + ++RE++
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG-----FLKRKKFLEAREVFD 690
Query: 618 KL 619
++
Sbjct: 691 QM 692
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 144/328 (43%), Gaps = 47/328 (14%)
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQVLKLY 206
D T +I+ + +++A +F +M + D+VT+ +I+GYC++G+ +++
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 207 EEMKTSDTKPDGVILCTVLSACGHSGNL-SYGKAIHE----------FIMD---NGLALS 252
M + P+ V T++ G+L S + +HE F + NGL S
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 253 AHLQSA---------------------LVNMYVNCGAMDLARELYDKLSSKHL----VVS 287
+++ A L++ Y G MD A+E+ ++ K L V
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 288 TAMLSGYAKHGMVKDARFIFDQIVEKDL----VCWSAMISGYAESDQPQEALKLFNEMQL 343
+++G+ HGM++D + + ++ K + +++++ Y + + A ++ +M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR 403
R + PD T + + + +A ++ GF S+S + LI + K +
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 404 AKEVFENMPRKNVISWSSMINAFAMHGY 431
A+EVF+ M R+ + + + + F+ Y
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKY 712
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/482 (20%), Positives = 205/482 (42%), Gaps = 26/482 (5%)
Query: 158 LIAMYSACRRIMDARLVFDKMSH----RDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSD 213
L + C + A +VF + + ++NI+I CQ G + L M+
Sbjct: 217 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 276
Query: 214 TKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLAR 273
PD + TV++ G L + E + GL ++++ +++ + + A
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 274 ELYDKLSSKHL----VVSTAMLSGYAKHGMVKDARFIFDQI----VEKDLVCWSAMISGY 325
E + ++ + + VV T ++ G+ K G ++ A F ++ + D++ ++A+ISG+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 326 AESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSL 385
+ EA KLF+EM + + PD +T I+ G + A +H + + G ++
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 386 SVNNALIDMYAKCGNLIRAKEVFENMPR----KNVISWSSMINAFAMHGYANSAMNLFHR 441
LID K G+L A E+ M + N+ +++S++N G A+ L
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 442 MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRAN 501
+ + + V + ++ A +G +++ Q++ M+ + G+ P + +++ +C
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHG 575
Query: 502 LLRKAMELIESM---PFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELEPDHDGALVV 558
+L +L+ M APN + SL+ + ++ K + DG
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 559 -LSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYK 617
L + K R + + Q M KG S ++ V I + + ++RE++
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG-----FLKRKKFLEAREVFD 690
Query: 618 KL 619
++
Sbjct: 691 QM 692
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 144/328 (43%), Gaps = 47/328 (14%)
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQVLKLY 206
D T +I+ + +++A +F +M + D+VT+ +I+GYC++G+ +++
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 207 EEMKTSDTKPDGVILCTVLSACGHSGNL-SYGKAIHE----------FIMD---NGLALS 252
M + P+ V T++ G+L S + +HE F + NGL S
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 253 AHLQSA---------------------LVNMYVNCGAMDLARELYDKLSSKHL----VVS 287
+++ A L++ Y G MD A+E+ ++ K L V
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 288 TAMLSGYAKHGMVKDARFIFDQIVEKDL----VCWSAMISGYAESDQPQEALKLFNEMQL 343
+++G+ HGM++D + + ++ K + +++++ Y + + A ++ +M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 344 RNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIR 403
R + PD T + + + +A ++ GF S+S + LI + K +
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 404 AKEVFENMPRKNVISWSSMINAFAMHGY 431
A+EVF+ M R+ + + + + F+ Y
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKY 712
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 191/431 (44%), Gaps = 45/431 (10%)
Query: 147 GFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLY 206
GFH L+ M S ++ R + DK D +T+ I++ G CQ GN D L L
Sbjct: 301 GFH--------LLGMISGAWEVI--RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 350
Query: 207 EEMKTSDTKPDGVILCTV-LSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVN 265
++M + + + +I C+V LS +G + ++ + +GL+ S +++
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410
Query: 266 CGAMDLARELYDKLSSKHLVVST----AMLSGYAKHGMVKDARFIFDQIVEK----DLVC 317
G D+A LYD++ K ++ ++ A+L G + GM+ +AR + D ++ D+V
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
++ +I GYA+S +EAL+LF + I P T S I +A+AR I
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 378 KNGFGRSLSVNNALIDMYAKCGNL-----IRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
G S+ L+D YA CGN +R + E +P NV ++S + G+
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV-TYSVIFKGLC-RGWK 588
Query: 433 NSAMN------LFHR-------MKEEDIEPNGVIFIGVL-YACSHAGLVEEGQKLFSSMI 478
+ N +F + M+ E I P+ + + ++ Y C L G +F ++
Sbjct: 589 HENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL--SGAFVFLEIM 646
Query: 479 NEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP---FAPNVIIWGSLMSACQVHGEV 535
+ Y ++D C +RKA I S+ + + + +L+ A V G+
Sbjct: 647 KSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDP 706
Query: 536 ELGEFAAKQIL 546
E+ Q+L
Sbjct: 707 EMAVKLFHQLL 717
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 161/387 (41%), Gaps = 61/387 (15%)
Query: 187 NIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMD 246
NI+I+G C G+ + L+L +M +PD V + G +S + ++D
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 247 NGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK-----HLVVSTAMLSGYAKHGMVK 301
GL+ + L+ G +D+ L + S+ ++ + MLSG K G +
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 302 DARFIFDQI----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAI 357
+A +F+Q+ + DLV +S +I G + + AL L++EM + I+P+ T + +
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 358 SACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM------ 411
G L +AR + +G + + N +ID YAK G + A E+F+ +
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 412 ---------------------PRK------------NVISWSSMINAFAMHGYANSAMNL 438
RK +V+S++++++A+A G S L
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 439 FHRMKEEDIEPN----GVIFIGVLYA-----CSHA---GLVEEGQKLFSSMINEHGIAPR 486
MK E I P VIF G+ C+H + E+ ++ M +E GI P
Sbjct: 561 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE-GIPPD 619
Query: 487 HEHYGCMVDLYCRANLLRKAMELIESM 513
Y ++ CR L A +E M
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIM 646
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 120/267 (44%), Gaps = 26/267 (9%)
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV----CWSAMISGYAESDQPQEALKLFN 339
+V +++SGY K G V A+ F +++ LV + +I+G EAL+L +
Sbjct: 222 VVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 281
Query: 340 EMQLRNIVPDQITMLSAISACANVGALAQARW--IHTYADKNGFGRSLSVNNALIDMYAK 397
+M + PD +T +G ++ A W I DK G S V I + +
Sbjct: 282 DMNKHGVEPDSVTYNILAKGFHLLGMISGA-WEVIRDMLDK---GLSPDVITYTILLCGQ 337
Query: 398 C--GNLIRAKEVFENMPRK-----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPN 450
C GN+ + ++M + ++I S M++ G + A++LF++MK + + P+
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397
Query: 451 GVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELI 510
V + V++ G + L+ M ++ I P +G ++ C+ +L +A L+
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKR-ILPNSRTHGALLLGLCQKGMLLEARSLL 456
Query: 511 ESMPFAP--------NVIIWGSLMSAC 529
+S+ + N++I G S C
Sbjct: 457 DSLISSGETLDIVLYNIVIDGYAKSGC 483
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 164/377 (43%), Gaps = 37/377 (9%)
Query: 184 VTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEF 243
VT N +++G+C + + L ++M +PD V T++ S A+ E
Sbjct: 136 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 195
Query: 244 IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDA 303
++ G A++N G DLA L +K+
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-------------------- 235
Query: 304 RFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV 363
+E D+V +S +I + +AL LF EM + I PD T S IS N
Sbjct: 236 -------IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISW 419
G + A + + + ++ N+LID +AK G LI A+++F+ M ++ N++++
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 420 SSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMIN 479
+S+IN F MH + A +F M +D P+ V + ++ A V +G +LF M +
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM-S 407
Query: 480 EHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSACQVHGEVE 536
G+ Y ++ + +A+ A + + M PN++ + +L+ +G++E
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 537 --LGEFAAKQILELEPD 551
+ F Q ++EPD
Sbjct: 468 KAMVVFEYLQKSKMEPD 484
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 182/388 (46%), Gaps = 23/388 (5%)
Query: 145 KLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYD 200
++G+ D T L+ + +A + ++M + D VT+ +I+G C+ G D
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 201 QVLKLYEEMKTSDTKPDGVILCTVL-SACGHSGNLSYGKAIHEFI-MDN-GLALSAHLQS 257
L L +M+ + D VI TV+ S C + A++ F MDN G+ S
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYR---HVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 258 ALVNMYVNCGA-MDLARELYDKLSSK---HLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
+L++ N G D +R L D L K ++V +++ +AK G + +A +FD+++++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 314 ----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
++V ++++I+G+ D+ EA ++F M ++ +PD +T + I+ +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINA 425
+ + G + LI + + + A+ VF+ M N+++++++++
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 426 FAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAP 485
+G AM +F +++ +EP+ + + AG VE+G LF S+ + G+ P
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL-SLKGVKP 518
Query: 486 RHEHYGCMVDLYCRANLLRKAMELIESM 513
Y M+ +C+ L +A L M
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 162/357 (45%), Gaps = 16/357 (4%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D V ++ +ID C+ + D L L+ EM +PD +++S + G S +
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAMLSGYAKH 297
+++ + + ++L++ + G + A +L+D++ + ++V ++++G+ H
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 298 GMVKDARFIFDQIVEKD----LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM 353
+ +A+ IF +V KD +V ++ +I+G+ ++ + + ++LF +M R +V + +T
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
+ I A+ + +G ++ N L+D K G L +A VFE + +
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 414 K----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEE 469
++ +++ M G +LF + + ++P+ + + ++ GL EE
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 470 GQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWG 523
LF M E G P Y ++ + R + ELI+ M FA + +G
Sbjct: 539 AYTLFIKM-KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 594
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 191/431 (44%), Gaps = 45/431 (10%)
Query: 147 GFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLY 206
GFH L+ M S ++ R + DK D +T+ I++ G CQ GN D L L
Sbjct: 301 GFH--------LLGMISGAWEVI--RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 350
Query: 207 EEMKTSDTKPDGVILCTV-LSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVN 265
++M + + + +I C+V LS +G + ++ + +GL+ S +++
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410
Query: 266 CGAMDLARELYDKLSSKHLVVST----AMLSGYAKHGMVKDARFIFDQIVEK----DLVC 317
G D+A LYD++ K ++ ++ A+L G + GM+ +AR + D ++ D+V
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
++ +I GYA+S +EAL+LF + I P T S I +A+AR I
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 378 KNGFGRSLSVNNALIDMYAKCGNL-----IRAKEVFENMPRKNVISWSSMINAFAMHGYA 432
G S+ L+D YA CGN +R + E +P NV ++S + G+
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV-TYSVIFKGLC-RGWK 588
Query: 433 NSAMN------LFHR-------MKEEDIEPNGVIFIGVL-YACSHAGLVEEGQKLFSSMI 478
+ N +F + M+ E I P+ + + ++ Y C L G +F ++
Sbjct: 589 HENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL--SGAFVFLEIM 646
Query: 479 NEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP---FAPNVIIWGSLMSACQVHGEV 535
+ Y ++D C +RKA I S+ + + + +L+ A V G+
Sbjct: 647 KSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDP 706
Query: 536 ELGEFAAKQIL 546
E+ Q+L
Sbjct: 707 EMAVKLFHQLL 717
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 161/387 (41%), Gaps = 61/387 (15%)
Query: 187 NIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMD 246
NI+I+G C G+ + L+L +M +PD V + G +S + ++D
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 247 NGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK-----HLVVSTAMLSGYAKHGMVK 301
GL+ + L+ G +D+ L + S+ ++ + MLSG K G +
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 302 DARFIFDQI----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAI 357
+A +F+Q+ + DLV +S +I G + + AL L++EM + I+P+ T + +
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 358 SACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM------ 411
G L +AR + +G + + N +ID YAK G + A E+F+ +
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 412 ---------------------PRK------------NVISWSSMINAFAMHGYANSAMNL 438
RK +V+S++++++A+A G S L
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 439 FHRMKEEDIEPN----GVIFIGVLYA-----CSHA---GLVEEGQKLFSSMINEHGIAPR 486
MK E I P VIF G+ C+H + E+ ++ M +E GI P
Sbjct: 561 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE-GIPPD 619
Query: 487 HEHYGCMVDLYCRANLLRKAMELIESM 513
Y ++ CR L A +E M
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIM 646
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 120/267 (44%), Gaps = 26/267 (9%)
Query: 284 LVVSTAMLSGYAKHGMVKDARFIFDQIVEKDLV----CWSAMISGYAESDQPQEALKLFN 339
+V +++SGY K G V A+ F +++ LV + +I+G EAL+L +
Sbjct: 222 VVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 281
Query: 340 EMQLRNIVPDQITMLSAISACANVGALAQARW--IHTYADKNGFGRSLSVNNALIDMYAK 397
+M + PD +T +G ++ A W I DK G S V I + +
Sbjct: 282 DMNKHGVEPDSVTYNILAKGFHLLGMISGA-WEVIRDMLDK---GLSPDVITYTILLCGQ 337
Query: 398 C--GNLIRAKEVFENMPRK-----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPN 450
C GN+ + ++M + ++I S M++ G + A++LF++MK + + P+
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397
Query: 451 GVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELI 510
V + V++ G + L+ M ++ I P +G ++ C+ +L +A L+
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKR-ILPNSRTHGALLLGLCQKGMLLEARSLL 456
Query: 511 ESMPFAP--------NVIIWGSLMSAC 529
+S+ + N++I G S C
Sbjct: 457 DSLISSGETLDIVLYNIVIDGYAKSGC 483
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/509 (21%), Positives = 211/509 (41%), Gaps = 88/509 (17%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR--- 181
+A K S + GLE+ + FI LI +R+ DA +FD+M R
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLL 246
Query: 182 -DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSAC------------ 228
+T+N +IDGYC++GN ++ K+ E MK +P + T+L
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 229 ---------------------GHSGNLSYGKA--IHEFIMDNGLALSAHLQSALVNMYVN 265
G+S N A ++E +D+G+ ++A+ S L+N
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 266 CGAMDLARELYDKLSSKHL----VVSTAMLSGYAKHGMVKDARFIFD----QIVEKDLVC 317
G ++ A E+ + +K L V+ M+ GY + G + AR + Q ++ D +
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVP----------------------------- 348
++ +I + E + + A K N+M+L+ + P
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 349 DQITMLSAIS-----ACANVGA-LAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLI 402
D TM + +S C G+ L +A+ + + G + + N LID G +
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 403 RAKEVFENMPRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVL 458
A + M +K N+++++++I+ +M G + A +L + + ++P+ + ++
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 459 YACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMPFAPN 518
AG V+ L+ M GI P + Y ++ L C + L M P+
Sbjct: 607 SGYGFAGNVQRCIALYEEM-KRSGIKPTLKTYHLLISL-CTKEGIELTERLFGEMSLKPD 664
Query: 519 VIIWGSLMSACQVHGEVELGEFAAKQILE 547
++++ ++ VHG++E KQ++E
Sbjct: 665 LLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 6/214 (2%)
Query: 184 VTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEF 243
VT+N +IDG +G + L E+ KPD +++S G +GN+ A++E
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 244 IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK-HLVVSTAMLSGYAKHGMVKD 302
+ +G+ + L+++ G ++L L+ ++S K L+V +L YA HG ++
Sbjct: 625 MKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEK 683
Query: 303 ARFIFDQIVEK----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAIS 358
A + Q++EK D ++++I G + + E L +EM R + P+ T +
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743
Query: 359 ACANVGALAQARWIHTYADKNGFGRSLSVNNALI 392
V A + + GF + + N L+
Sbjct: 744 GHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELV 777
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 142/361 (39%), Gaps = 46/361 (12%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVIL-CTVLSACGHSGNLSYGKAI 240
+ V +N MIDGYC+ G+ E M+ KPD + C + C + K +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 241 HEFIMDNGLALSAHLQSALVNMYVNC----GAMDLARELYDKLSSKHLVVSTAMLSGYAK 296
++ + G++ S + L+ Y D+ +E+ D + ++V +++ K
Sbjct: 448 NKMKL-KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 297 HGMVKDARFIF----DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQIT 352
+ +A+ + D+ V + ++ +I G + ++A + EM + I + +T
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 353 MLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP 412
+ I + G L++A + + G + N+LI Y GN+ R ++E M
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 413 RKNV-----------------------------------ISWSSMINAFAMHGYANSAMN 437
R + + ++ +++ +A+HG A N
Sbjct: 627 RSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLY 497
L +M E+ I + + ++ G + E + L M N + P + Y +V +
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM-NAREMEPEADTYNIIVKGH 745
Query: 498 C 498
C
Sbjct: 746 C 746
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 157/353 (44%), Gaps = 16/353 (4%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D ++ I+I G C++G ++ L E+ P+ VI T++ C G + K +
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAMLSGYAKH 297
+ GL + + L+N G E+Y+K+ +L +++ K
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 298 GMVKDARFIFDQIVEKDLVC----WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM 353
G KDA +FD++ E+ + C ++ +I G + EA K+ ++M+ I P+ IT
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
+ I VG L +A + G SL N L+ + + G+ A ++ + M
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 414 KNV----ISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEE 469
+ + ++++ +I+ FA A+ L M+E + P+ + +++ G + E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 470 GQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNV 519
+LF SM+ E P Y M+ YC+ +A++L++ M APNV
Sbjct: 462 ASRLFKSMV-EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/421 (19%), Positives = 170/421 (40%), Gaps = 29/421 (6%)
Query: 220 ILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL 279
+L V+S HS + +H L ++N YV +++L+ ++++
Sbjct: 61 LLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEM 120
Query: 280 SSKHLVVSTAMLSGYAKHGMVKDARF-----IFDQIVEK---DLVCWSAMISGYAESDQP 331
V + + Y +V + F F++ K D+ + +I G E+ +
Sbjct: 121 VDNGFVPGSNCFN-YLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEI 179
Query: 332 QEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNAL 391
+++ L E+ P+ + + I C G + +A+ + K G + L
Sbjct: 180 EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239
Query: 392 IDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDI 447
I+ K G + E++E M N+ +++ ++N G A +F M+E +
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 448 EPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAM 507
N V + ++ + E K+ M ++ GI P Y ++D +C L KA+
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 508 EL---IESMPFAPNVIIWGSLMSACQVHGEVELGEFAAKQILELE----PDHDGALVVLS 560
L ++S +P+++ + L+S G+ AAK + E+E +L
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDT---SGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 561 NIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKLE 620
+ +A+ +R SM G+ + + V I H F + + ++ SR ++K +
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI----HGFCIKGQMNEASR-LFKSMV 470
Query: 621 E 621
E
Sbjct: 471 E 471
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 9/187 (4%)
Query: 184 VTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEF 243
VT+NI++ G+C+ G+ K+ +EM+ KP V ++ S N+ +
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 244 IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL----VVSTAMLSGYAKHGM 299
+ + GL H S L++ + G M+ A L+ + K+ V+ M+ GY K G
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 300 VKDARFIFDQIVEKDL----VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLS 355
A + ++ EK+L + MI + + +EA +L +M I P ++LS
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP-STSILS 552
Query: 356 AISACAN 362
IS N
Sbjct: 553 LISRAKN 559
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 200/456 (43%), Gaps = 59/456 (12%)
Query: 129 KASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKM---------- 178
+ S L L L + G KLG+ D + L+ Y +RI +A + D+M
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 179 -----------------------------SHRDAVTWNIMIDGYCQSGNYDQVLKLYEEM 209
D T+ +++G C+ G+ D L L ++M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 210 KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI-MDN-GLALSAHLQSALVNMYVNCG 267
+ + D VI T++ A + N++ A++ F MDN G+ + ++L+ N G
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVN--DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 268 A-MDLARELYDKLSSK---HLVVSTAMLSGYAKHGMVKDARFIFDQIVEK----DLVCWS 319
D +R L D + K ++V +A++ + K G + +A ++D+++++ D+ +S
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 320 AMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKN 379
++I+G+ D+ EA +F M ++ P+ +T + I + + + +
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 380 GFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAFAMHGYANSA 435
G + N LI + G+ A+++F+ M ++I++S +++ +G A
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 436 MNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVD 495
+ +F +++ +EP+ + ++ AG VE+G LF S+ + G+ P Y M+
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMIS 543
Query: 496 LYCRANLLRKAMELIESMP---FAPNVIIWGSLMSA 528
+CR L +A L M PN + +L+ A
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 185/389 (47%), Gaps = 22/389 (5%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D ++NI+I+ +C+ L + +M +PD V L ++L+ H +S A+
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 242 E--FIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAMLSGYA 295
+ F+M+ + + + ++++ A + A L D++ ++ L +++G
Sbjct: 174 DQMFVMEYQ-PNTVTFNTLIHGLFLHNKASE-AVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 296 KHGMVKDARFIFDQI----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQI 351
K G + A + ++ +E D+V ++ +I +AL LF EM + I P+ +
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 352 TMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM 411
T S I N G + A + + + ++ +ALID + K G L+ A+++++ M
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 412 PRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLV 467
++ ++ ++SS+IN F MH + A ++F M +D PN V + ++ A V
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 468 EEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRA---NLLRKAMELIESMPFAPNVIIWGS 524
EEG +LF M ++ G+ Y ++ +A ++ +K + + S P++I +
Sbjct: 412 EEGMELFREM-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 525 LMSACQVHGEVE--LGEFAAKQILELEPD 551
L+ +G++E L F Q ++EPD
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 160/374 (42%), Gaps = 21/374 (5%)
Query: 180 HRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKA 239
+R+ ++ N+++D D + L+ EM S P V +LSA +
Sbjct: 47 YREKLSRNVLLDL-----KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVIS 101
Query: 240 IHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL----SSKHLVVSTAMLSGYA 295
+ E + + ++ + + L+N + + LA + K+ +V +++L+GY
Sbjct: 102 LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 161
Query: 296 KHGMVKDARFIFDQIV----EKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQI 351
+ +A + DQ+ + + V ++ +I G ++ EA+ L + M R PD
Sbjct: 162 HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF 221
Query: 352 TMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM 411
T + ++ G + A + +K + + +ID N+ A +F M
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 412 P----RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLV 467
R NV++++S+I +G + A L M E I PN V F ++ A G +
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 468 EEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKA---MELIESMPFAPNVIIWGS 524
E +KL+ MI + I P Y +++ +C + L +A EL+ S PNV+ + +
Sbjct: 342 VEAEKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 525 LMSACQVHGEVELG 538
L+ VE G
Sbjct: 401 LIKGFCKAKRVEEG 414
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 116/262 (44%), Gaps = 12/262 (4%)
Query: 145 KLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRD----AVTWNIMIDGYCQSGNYD 200
K D F + LI + R+ +A+ +F+ M +D VT+N +I G+C++ +
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 201 QVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALV 260
+ ++L+ EM + V T++ +G+ + I + ++ +G+ S L+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 261 NMYVNCGAMDLARELYDKLSSKHL----VVSTAMLSGYAKHGMVKDARFIFDQI----VE 312
+ G ++ A +++ L + M+ G K G V+D +F + V+
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWI 372
+++ ++ MISG+ +EA LF EM+ +P+ T + I A G A + +
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 373 HTYADKNGFGRSLSVNNALIDM 394
GF S + +I+M
Sbjct: 593 IKEMRSCGFVGDASTISMVINM 614
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 160/341 (46%), Gaps = 13/341 (3%)
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
+ I+++G C+ G ++ KL +E KP+ T+++A + S + + + +
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLV----VSTAMLSGYAKHGMV 300
+G+ + + L+ + V G M A +L+D++ + + V T+++S + G +
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNM 345
Query: 301 KDARFIFDQIVEKDL----VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSA 356
K A +FD++ EK L + A+I G + + A L NEMQ + + Q+ +
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 357 ISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKE----VFENMP 412
I G + +A I+ ++ GF + N + + + AK+ + E
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Query: 413 RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQK 472
+ + +S++++I+ + G A LF M + ++PN + + ++YA G ++E +K
Sbjct: 466 KLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARK 525
Query: 473 LFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
L ++M +G+ P Y ++ C A+ + +AM L M
Sbjct: 526 LRANM-EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM 565
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 12/219 (5%)
Query: 184 VTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEF 243
V +N +IDGYC+ G D+ +Y+ M+ + D V C +++C + Y +A
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD-VFTCNTIASCFNRLK-RYDEAKQWL 457
Query: 244 --IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL----VVSTAMLSGYAKH 297
+M+ G+ LS + L+++Y G ++ A+ L+ ++SSK + + M+ Y K
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQ 517
Query: 298 GMVKDARFIFDQI----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM 353
G +K+AR + + ++ D ++++I G +D EA++LF+EM L+ + + +T
Sbjct: 518 GKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTY 577
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALI 392
IS + G +A ++ + G+ V ALI
Sbjct: 578 TVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 135/324 (41%), Gaps = 47/324 (14%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
+ VT+ ++++ ++G KL++EM+ + D + +++S GN+ +
Sbjct: 293 NKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLF 352
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL----VVSTAMLSGYAKH 297
+ + + GL+ S++ AL++ G M A L +++ SK + VV ++ GY +
Sbjct: 353 DELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRK 412
Query: 298 GMVKDARFIFDQIVEKDL---------------------------------------VCW 318
GMV +A I+D + +K V +
Sbjct: 413 GMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSY 472
Query: 319 SAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADK 378
+ +I Y + +EA +LF EM + + P+ IT I A G + +AR + +
Sbjct: 473 TNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEA 532
Query: 379 NGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAFAMHGYANS 434
NG +LI N+ A +F M K N ++++ MI+ + G ++
Sbjct: 533 NGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDE 592
Query: 435 AMNLFHRMKEEDIEPNGVIFIGVL 458
A L+ MK + + ++ ++
Sbjct: 593 AFGLYDEMKRKGYTIDNKVYTALI 616
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Query: 139 IHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYC 194
I+ + + GF +D F + + ++ +R +A+ +M V++ +ID YC
Sbjct: 421 IYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYC 480
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
+ GN ++ +L+ EM + +P+ + ++ A G + + + + NG+ ++
Sbjct: 481 KEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSY 540
Query: 255 LQSALVNMYVNCGAMDLARELYDKLSSKHL----VVSTAMLSGYAKHGMVKDARFIFDQI 310
++L++ +D A L+ ++ K L V T M+SG +K G +A ++D++
Sbjct: 541 TYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Query: 311 VEK----DLVCWSAMI 322
K D ++A+I
Sbjct: 601 KRKGYTIDNKVYTALI 616
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 181/410 (44%), Gaps = 29/410 (7%)
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGL--------IAMYSACRRIMDARL---VFDKMS 179
+ L GL +H AS+ D +Q G + + C+R D L + +KM
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR-GDTDLALNLLNKME 252
Query: 180 ----HRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLS 235
D V +N +ID C+ + D L L++EM+T +P+ V +++S G S
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 312
Query: 236 YGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAML 291
+ +++ + + +AL++ +V G A +LYD + + + +++
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 292 SGYAKHGMVKDARFIFDQIVEKD----LVCWSAMISGYAESDQPQEALKLFNEMQLRNIV 347
+G+ H + A+ +F+ +V KD +V ++ +I G+ +S + ++ +LF EM R +V
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 348 PDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEV 407
D +T + I + G A+ + +G + + L+D G L +A EV
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Query: 408 FENMPRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
F+ M + ++ +++MI G + +LF + + ++PN V + ++
Sbjct: 493 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
L++E L M E G P Y ++ + R + ELI M
Sbjct: 553 KRLLQEAYALLKKM-KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 179/404 (44%), Gaps = 51/404 (12%)
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
T+NI+I+ +C+ L L +M +P V L ++L+ H +S A+ + +
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAMLSGYAKHGMV 300
++ G + L++ A L D++ + +LV +++G K G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 301 KDARFIFDQI----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSA 356
A + +++ +E D+V ++ +I + +AL LF EM+ + I P+ +T S
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 357 ISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-- 414
IS + G + A + + + +L NALID + K G + A++++++M ++
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 415 --NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYA-C---------- 461
++ +++S++N F MH + A +F M +D P+ V + ++ C
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 462 -----SHAGLV-------------------EEGQKLFSSMINEHGIAPRHEHYGCMVDLY 497
SH GLV + QK+F M+++ G+ P Y ++D
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGL 480
Query: 498 CRANLLRKAMELIESM---PFAPNVIIWGSLMSACQVHGEVELG 538
C L KA+E+ + M ++ I+ +++ G+V+ G
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/506 (19%), Positives = 211/506 (41%), Gaps = 57/506 (11%)
Query: 78 PNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGL 137
P P N+LL +++ + L +K++R+ + S + L L
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMS------------------ 179
+ G KLG+ + L+ Y +RI DA + D+M
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 180 --HRDA-------------------VTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDG 218
H A VT+ ++++G C+ G+ D L L +M+ + + D
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 219 VILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCG----AMDLARE 274
VI T++ + ++ + + + G+ + S+L++ + G A L +
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 275 LYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK----DLVCWSAMISGYAESDQ 330
+ +K + +LV A++ + K G +A ++D ++++ D+ ++++++G+ D+
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 331 PQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNA 390
+A ++F M ++ PD +T + I + + G
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 391 LIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEED 446
LI G+ A++VF+ M +++++S +++ +G A+ +F M++ +
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 447 IEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKA 506
I+ + I+ ++ AG V++G LF S+ + G+ P Y M+ C LL++A
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 507 MELIESM----PFAPNVIIWGSLMSA 528
L++ M P PN + +L+ A
Sbjct: 560 YALLKKMKEDGPL-PNSGTYNTLIRA 584
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 183/391 (46%), Gaps = 21/391 (5%)
Query: 141 GLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQS 196
G ++G+ D F LI R +A + D+M + D VT+ I+++G C+
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 197 GNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI-MDN-GLALSAH 254
G+ D L L ++M+ +P VI T++ A + N++ A++ F MDN G+ +
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN--DALNLFTEMDNKGIRPNVV 292
Query: 255 LQSALVNMYVNCGA-MDLARELYDKLSSK---HLVVSTAMLSGYAKHGMVKDARFIFDQI 310
++L+ N G D +R L D + K ++V +A++ + K G + +A ++D++
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 311 VEK----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGAL 366
+++ D+ +S++I+G+ D+ EA +F M ++ P+ +T + I +
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 367 AQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVI----SWSSM 422
+ + + G + LI + + A+ VF+ M V+ ++S +
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 423 INAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHG 482
++ +G +A+ +F ++ +EP+ + ++ AG VE+G LF S+ + G
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKG 531
Query: 483 IAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
+ P Y M+ +CR L +A L M
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 152/343 (44%), Gaps = 13/343 (3%)
Query: 183 AVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE 242
V +N +ID C N + L L+ EM +P+ V +++ + G S +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 243 FIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAMLSGYAKHG 298
+++ + + SAL++ +V G + A +LYD++ + + +++++G+ H
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 299 MVKDARFIFDQIVEKD----LVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITML 354
+ +A+ +F+ ++ KD +V ++ +I G+ ++ + E ++LF EM R +V + +T
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 355 SAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK 414
+ I A+ + +G + + L+D G + A VFE + R
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 415 ----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEG 470
++ +++ MI G +LF + + ++PN V + ++ GL EE
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 471 QKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
LF M E G P Y ++ + R + ELI M
Sbjct: 556 DALFREM-KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 176/384 (45%), Gaps = 18/384 (4%)
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
T++I+I+ +C+ L + +M +PD V L ++L+ H +S ++ +
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAMLSGYAKHGMV 300
++ G + + L++ A L D++ K LV +++G K G +
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 301 KDARFIFDQI----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSA 356
A + ++ +E +V ++ +I +AL LF EM + I P+ +T S
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 357 ISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-- 414
I N G + A + + + ++ +ALID + K G L+ A+++++ M ++
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 415 --NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQK 472
++ ++SS+IN F MH + A ++F M +D PN V + ++ A V+EG +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 473 LFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSAC 529
LF M ++ G+ Y ++ + +A A + + M P+++ + L+
Sbjct: 418 LFREM-SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 530 QVHGEVE--LGEFAAKQILELEPD 551
+G+VE L F Q ++EPD
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPD 500
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 149/344 (43%), Gaps = 16/344 (4%)
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSAL 259
D + L+ +M S P V +LSA ++ E + + G++ + + S L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 260 VNMYVNCGAMDLARELYDKL----SSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE--- 312
+N + + LA + K+ +V ++L+G+ + DA + Q+VE
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 313 -KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
D ++ +I G ++ EA+ L + M ++ PD +T ++ G + A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP----RKNVISWSSMINAFA 427
+ ++ + + N +ID N+ A +F M R NV++++S+I
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 428 MHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
+G + A L M E I PN V F ++ A G + E +KL+ MI + I P
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI-KRSIDPDI 361
Query: 488 EHYGCMVDLYCRANLLRKA---MELIESMPFAPNVIIWGSLMSA 528
Y +++ +C + L +A EL+ S PNV+ + +L+
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 167/367 (45%), Gaps = 19/367 (5%)
Query: 141 GLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKM----SHRDAVTWNIMIDGYCQS 196
G KLGF D T L+ Y RI DA +FD++ + VT+ +I C++
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 197 GNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQ 256
+ + ++L+ +M T+ ++P+ V +++ G + +M + +
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 257 SALVNMYVNCGAMDLARELYDKLSS----KHLVVSTAMLSGYAKHGMVKDARFIFDQIVE 312
+AL++ +V G + A+ELY+ + + ++++G +G++ +AR +F ++E
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF-YLME 320
Query: 313 K-----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
+ + V ++ +I G+ +S + ++ +K+F EM + +V + IT I VG
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 368 QARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMI 423
A+ + + N L+D G + +A +FE M ++ N+++++ +I
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
G A +LF + + ++PN + + ++ GL+ E LF M E G
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM-KEDGF 499
Query: 484 APRHEHY 490
P Y
Sbjct: 500 LPNESVY 506
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 156/352 (44%), Gaps = 16/352 (4%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D VT+ +++GYC + + L++++ KP+ V T++ + +L++ +
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCG----AMDLARELYDKLSSKHLVVSTAMLSGYAKH 297
+ NG + +ALV G A L R++ + +++ TA++ + K
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 298 GMVKDARFIFDQIVE----KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM 353
G + +A+ +++ +++ D+ + ++I+G EA ++F M+ P+++
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
+ I + I + G + LI Y G A+EVF M
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 414 K----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEE 469
+ ++ +++ +++ +G A+ +F M++ +++ N V + ++ G VE+
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 470 GQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP---FAPN 518
LF S+ ++ G+ P Y M+ +CR L+ +A L + M F PN
Sbjct: 452 AFDLFCSLFSK-GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 180/410 (43%), Gaps = 29/410 (7%)
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGL--------IAMYSACRRIMDARLVFDKMS--- 179
+ L GL +H AS+ D +Q G + + C+R D L F+ ++
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR-GDIDLAFNLLNKME 177
Query: 180 ----HRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLS 235
D V +N +ID C+ + D L L++EM+T +P+ V +++S G S
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 236 YGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAML 291
+ +++ + + +AL++ +V G A +L+D + + + +++
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 292 SGYAKHGMVKDARFIFDQIVEKD----LVCWSAMISGYAESDQPQEALKLFNEMQLRNIV 347
+G+ H + A+ +F+ +V KD L ++ +I G+ +S + ++ +LF EM R +V
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 348 PDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEV 407
D +T + I + G A+ + +G + + L+D G L +A EV
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 408 FENMPRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
F+ M + ++ +++MI G + +LF + + ++PN V + ++
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
L++E L M E G P Y ++ + R + ELI M
Sbjct: 478 KRLLQEAYALLKKM-KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/476 (20%), Positives = 194/476 (40%), Gaps = 47/476 (9%)
Query: 78 PNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGL 137
P P N+LL +++ + L +K++R+G + S + L L
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
+ G KLG+ +P I VT + +++GYC
Sbjct: 66 ALLGKMMKLGY--EPSI-----------------------------VTLSSLLNGYCHGK 94
Query: 198 NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
+ L ++M +PD + T++ S A+ + ++ G +
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 258 ALVNMYVNCGAMDLARELYDKLSSKHL----VVSTAMLSGYAKHGMVKDARFIFDQI--- 310
+VN G +DLA L +K+ + + V+ ++ K+ V DA +F ++
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 311 -VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
+ ++V +S++IS + +A +L ++M + I P+ +T + I A G +A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVI----SWSSMINA 425
+H K + N+LI+ + L +AK++FE M K+ +++++I
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 426 FAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAP 485
F LF M + + V + ++ H G + QK+F M+++ G+ P
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPP 393
Query: 486 RHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSACQVHGEVELG 538
Y ++D C L KA+E+ + M ++ I+ +++ G+V+ G
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/469 (20%), Positives = 201/469 (42%), Gaps = 26/469 (5%)
Query: 80 PDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEI 139
PDTHF N++L LL + + + K+ G KA+ +A L + +
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 140 HGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDA----VTWNIMIDGYCQ 195
G D T ++ Y + A + ++M V+ N+++ G+C+
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 196 SGNYDQVLKLYEEMKTSDTK-PDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAH 254
G + L +EM D PD T+++ +G++ + I + ++ G +
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331
Query: 255 LQSALVNMYVNCGAMDLARELYDKL----SSKHLVVSTAMLSGYAKHGMVKDA----RFI 306
+++++ G + A E+ D++ S + V ++S K V++A R +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 307 FDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGAL 366
+ + D+ ++++I G + + A++LF EM+ + PD+ T I + + G L
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 367 AQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMP----RKNVISWSSM 422
+A + + +G RS+ N LID + K A+E+F+ M +N ++++++
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 423 INAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHG 482
I+ A L +M E +P+ + +L G +++ + +M + +G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS-NG 570
Query: 483 IAPRHEHYGCMVDLYCRANLLRKAMELIESM--------PFAPNVIIWG 523
P YG ++ C+A + A +L+ S+ P A N +I G
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/437 (18%), Positives = 180/437 (41%), Gaps = 45/437 (10%)
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDN-GLALSA 253
+SG++D + K+ E+MK+S + ++ + ++ ++++D GL
Sbjct: 95 RSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDT 154
Query: 254 HLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK 313
H + ++N+ V+ ++ L +S A +S + ++
Sbjct: 155 HFYNRMLNLLVDGNSLKLVE------------ISHAKMSVWG---------------IKP 187
Query: 314 DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIH 373
D+ ++ +I + Q + A+ + +M +VPD+ T + + G L A I
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 374 TYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVI-----SWSSMINAFAM 428
+ G S N ++ + K G + A + M ++ ++++++N
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 429 HGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHE 488
G+ A+ + M +E +P+ + V+ G V+E ++ MI +P
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT-RDCSPNTV 366
Query: 489 HYGCMVDLYCRANLLRKAMEL---IESMPFAPNVIIWGSLMSA-CQVHG-EVELGEFAAK 543
Y ++ C+ N + +A EL + S P+V + SL+ C V + F
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 544 QILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFM 603
+ EPD +++ ++ +K + + +++Q M G A S + N + F
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ-MELSGC----ARSVITYNTLIDGFC 481
Query: 604 MADRYHKQSREIYKKLE 620
A++ +++ EI+ ++E
Sbjct: 482 KANK-TREAEEIFDEME 497
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 78/176 (44%), Gaps = 8/176 (4%)
Query: 181 RDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAI 240
R +T+N +IDG+C++ + ++++EM+ + V T++ S + +
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 241 HEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAMLSGYAK 296
+ ++ G + ++L+ + G + A ++ ++S +V ++SG K
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 297 HGMVKDARFIFDQIVEKDLV----CWSAMISGYAESDQPQEALKLFNEMQLRNIVP 348
G V+ A + I K + ++ +I G + EA+ LF EM +N P
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 173/399 (43%), Gaps = 21/399 (5%)
Query: 145 KLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYD 200
++G+ D T L+ + +A + ++M + D VT+ +I+G C+ G D
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 201 QVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALV 260
L L +M+ + D VI T++ ++ + + G+ + L+
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 261 NMYVNCGAM-DLARELYDKLS---SKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK--- 313
+ N G D +R L D L + LV A++ + K G + +A ++D++V+
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 314 --DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
D+V ++ +I G+ + + +E +++F EM R +V + +T + I A+
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKN----VISWSSMINAFA 427
+ +G + N L+D GN+ A VFE M +++ ++++++MI A
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 428 MHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
G +LF + + ++PN V + ++ GL EE LF M E G P
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM-KEDGPLPNS 531
Query: 488 EHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWG 523
Y ++ R + ELI+ M FA + +G
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 154/364 (42%), Gaps = 38/364 (10%)
Query: 184 VTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEF 243
VT N +++G+C + + L ++M +PD V T++ S A+ E
Sbjct: 146 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 205
Query: 244 IMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDA 303
++ G A++N G DLA L +K+
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-------------------- 245
Query: 304 RFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV 363
+E D+V ++ +I G + +A LFN+M+ + I PD T IS N
Sbjct: 246 -------IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 364 GALAQA-RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-----NVI 417
G + A R + +KN L NALID + K G L+ A+++++ M + +V+
Sbjct: 299 GRWSDASRLLSDMLEKN-INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 418 SWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSM 477
+++++I F + M +F M + + N V + +++ A + Q +F M
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 478 INEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSACQVHGE 534
+++ G+ P Y ++D C + A+ + E M +++ + +++ A G+
Sbjct: 418 VSD-GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 535 VELG 538
VE G
Sbjct: 477 VEDG 480
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 35/192 (18%)
Query: 125 KAVSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMS----H 180
K K + G+E+ S+ G + T LI + R +A++VF +M H
Sbjct: 364 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 423
Query: 181 RDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAI 240
D +T+NI++DG C +GN + L ++E M+ D K D V T++ A +G + G
Sbjct: 424 PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG--- 480
Query: 241 HEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMV 300
DL L K ++V T M+SG+ + G+
Sbjct: 481 ----------------------------WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 512
Query: 301 KDARFIFDQIVE 312
++A +F ++ E
Sbjct: 513 EEADALFVEMKE 524
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 167/372 (44%), Gaps = 16/372 (4%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D VT N +++G+C + L ++M KPD V T++ S A+
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSS----KHLVVSTAMLSGYAKH 297
+ ++ G A+VN G DLA L +K+ + ++V+ + ++ K+
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 298 GMVKDARFIFDQI----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM 353
DA +F ++ V +++ +S++IS + +A +L ++M R I P+ +T
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
+ I A G L +A ++ K ++ ++LI+ + L AK++ E M R
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 414 K----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEE 469
K NV++++++IN F + M LF M + + N V + +++ A +
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 446
Query: 470 GQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAM---ELIESMPFAPNVIIWGSLM 526
Q +F M++ G+ P Y ++D C+ L KAM E ++ P++ + ++
Sbjct: 447 AQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 527 SACQVHGEVELG 538
G+ ++G
Sbjct: 506 EGMCKAGKWKMG 517
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/491 (20%), Positives = 205/491 (41%), Gaps = 49/491 (9%)
Query: 78 PNPDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGL 137
P P N+LL +++ + L +K++R+G + S + L L
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 138 EIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSG 197
+ G KLG+ +P I VT + +++GYC
Sbjct: 141 ALLGKMMKLGY--EPSI-----------------------------VTLSSLLNGYCHGK 169
Query: 198 NYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQS 257
+ L ++M +PD + T++ S A+ + ++ G +
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 258 ALVNMYVNCGAMDLARELYDKLSS----KHLVVSTAMLSGYAKHGMVKDARFIFDQI--- 310
+VN G +DLA L +K+ + ++V+ + ++ K+ DA +F ++
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 311 -VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQA 369
V +++ +S++IS ++ +A +L ++M R I P+ +T + I A G L +A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 370 RWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINA 425
++ K + ++LI+ + L AK +FE M K NV++++++IN
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 426 FAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAP 485
F + + LF M + + N V + +++ A + Q +F M+++ G+ P
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHP 468
Query: 486 RHEHYGCMVDLYCRANLLRKAM---ELIESMPFAPNVIIWGSLMSACQVHGEVELG--EF 540
Y ++D C+ L KAM E ++ P + + ++ G+VE G F
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Query: 541 AAKQILELEPD 551
+ + ++PD
Sbjct: 529 CSLSLKGVKPD 539
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 174/382 (45%), Gaps = 29/382 (7%)
Query: 131 SALYLGLEIHGLASKLGFHSDPFIQTGL--------IAMYSACRRIMDARLVFDKMSHRD 182
+ L GL +H AS+ D +Q G + + C+R D L F+ ++ +
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR-GDIDLAFNLLNKME 252
Query: 183 A-------VTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLS 235
A V ++ +ID C+ + D L L+ EM+ +P+ + +++S + S
Sbjct: 253 AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS 312
Query: 236 YGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAML 291
+ +++ + + +AL++ +V G + A +LYD++ + + ++++
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 292 SGYAKHGMVKDARFIFDQIVEKD----LVCWSAMISGYAESDQPQEALKLFNEMQLRNIV 347
+G+ H + +A+ +F+ ++ KD +V ++ +I+G+ ++ + E ++LF EM R +V
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 348 PDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEV 407
+ +T + I A+ + +G ++ N L+D K G L +A V
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 408 FENMPRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
FE + R + +++ MI G +LF + + ++P+ +I+ ++
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Query: 464 AGLVEEGQKLFSSMINEHGIAP 485
GL EE LF M E G P
Sbjct: 553 KGLKEEADALFRKM-REDGPLP 573
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 145 KLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRD----AVTWNIMIDGYCQSGNYD 200
K D F + LI + R+ +A+ +F+ M +D VT+N +I+G+C++ D
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 201 QVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALV 260
+ ++L+ EM + V T++ + + + + + ++ +G+ + + L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 261 NMYVNCGAMDLARELYDKLSSKHL----VVSTAMLSGYAKHGMVKDARFIFDQI----VE 312
+ G ++ A +++ L + M+ G K G V+D +F + V+
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 313 KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQIT 352
D++ ++ MISG+ +EA LF +M+ +PD T
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 170/398 (42%), Gaps = 51/398 (12%)
Query: 173 LVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSG 232
LV D + VT+ +I+G+C+ G D+ L++ M+ +PD + T++ +G
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 233 NLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL----SSKHLVVST 288
L G + + G+ L + S+ +++YV G + A +Y ++ S ++V T
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 289 AMLSGYAKHGMVKDARFIFDQIV----EKDLVCWSAMISGYAESDQPQEALKLFNEMQLR 344
++ G + G + +A ++ QI+ E +V +S++I G+ + + L+ +M
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 345 NIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRA 404
PD + + + G + A ++ V N+LID + + A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 405 KEVFENMP----RKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYA 460
+VF M + +V ++++++ M G A+ LF RM + +EP+ + + ++ A
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 461 -CSH----AGL------------------------------VEEGQKLFSSMINEHGIAP 485
C H GL +E+ K F+++I E + P
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI-EGKMEP 634
Query: 486 RHEHYGCMVDLYCRANLLRKA---MELIESMPFAPNVI 520
Y M+ YC L +A EL++ PF PN +
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 672
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/525 (19%), Positives = 213/525 (40%), Gaps = 70/525 (13%)
Query: 127 VSKASALYLGLEIHGLASKLGFHS---DPFIQTGLIAMYSACRRIMDARLVFDKMSHR-- 181
+ +A L+ +E G+ L +S D + + G++ M +F + H+
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM---------GHKLFSQALHKGV 352
Query: 182 --DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKA 239
D V ++ ID Y +SG+ +Y+ M P+ V ++ G +
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 240 IHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL----SSKHLVVSTAMLSGYA 295
++ I+ G+ S S+L++ + CG + LY+ + +V+ ++ G +
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 296 KHGMVKDA-RF---IFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQI 351
K G++ A RF + Q + ++V ++++I G+ ++ EALK+F M + I PD
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 352 TMLSAISACANVGALAQARWIH----------------TYAD------------------ 377
T + + G L +A ++ T D
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 378 -KNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR----KNVISWSSMINAFAMHGYA 432
+N ++V N +I + KC + A + F N+ +++++++MI +
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
+ A +F +K PN V +++ ++ ++FS M E G P YGC
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM-AEKGSKPNAVTYGC 711
Query: 493 MVDLYCRANLLRKAMELIESMP---FAPNVIIWGSLMSACQVHGEVELGEFAAKQILE-- 547
++D + ++ + + +L E M +P+++ + ++ G V+ Q ++
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 771
Query: 548 LEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKGISKEKASSR 592
L PD A +L Y K R + L+ + M G+ + R
Sbjct: 772 LLPDV-VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQR 815
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 128/306 (41%), Gaps = 12/306 (3%)
Query: 80 PDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEI 139
PD ++R+ + LFL+ ++ ++G A K +GL++
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 140 HGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKM----SHRDAVTWNIMIDGYCQ 195
L + +D + +I + C RI DA F+ + D VT+N MI GYC
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 196 SGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHL 255
D+ +++E +K + P+ V L ++ + ++ + + + G +A
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708
Query: 256 QSALVNMYVNC----GAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIV 311
L++ + G+ L E+ +K S +V + ++ G K G V +A IF Q +
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 312 E----KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
+ D+V ++ +I GY + + EA L+ M + PD + + ++
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMS 828
Query: 368 QARWIH 373
+ W+H
Sbjct: 829 KGVWVH 834
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 152/373 (40%), Gaps = 39/373 (10%)
Query: 189 MIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVIL-CTVLSACGHSGNLSYGKAIHEFIMDN 247
M++ S D + ++++ +P GV VL A G ++ H +M+
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 248 GLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIF 307
G + V+C ++ LS + V++ +LS +
Sbjct: 247 GFRVGI----------VSC------NKVLKGLSVDQIEVASRLLS------------LVL 278
Query: 308 DQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALA 367
D ++V + +I+G+ + + A LF M+ R I PD I + I G L
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 368 QARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENM----PRKNVISWSSMI 423
+ + A G + V ++ ID+Y K G+L A V++ M NV++++ +I
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 424 NAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGI 483
G A ++ ++ + +EP+ V + ++ G + G L+ MI + G
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI-KMGY 457
Query: 484 APRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSA-CQVHGEVE-LG 538
P YG +VD + L+ AM M NV+++ SL+ C+++ E L
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 539 EFAAKQILELEPD 551
F I ++PD
Sbjct: 518 VFRLMGIYGIKPD 530
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 167 RIMDARLVFDKMS----HRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILC 222
+ ++A L+FD + H VT+N +IDG C+SGN + +L EEM T PD +
Sbjct: 389 KFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYT 448
Query: 223 TVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL-SS 281
T++ +GNLS +++ ++ G+ + + + G D A L++++ ++
Sbjct: 449 TLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVAT 508
Query: 282 KH----LVVSTAMLSGYAKHG-MVKDARF---IFDQIVEKDLVCWSAMISGYAESDQPQE 333
H L + + G K G +VK F IF + D V ++ +I GY E+ Q +
Sbjct: 509 DHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKM 568
Query: 334 ALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALID 393
A L++EM + + P IT I A G L QA T K G ++ +NAL+
Sbjct: 569 ARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLY 628
Query: 394 MYAKCGNLIRAKEVF-----ENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIE 448
K GN+ A E +P N S++ +I+ + L+ M +++IE
Sbjct: 629 GMCKAGNIDEAYRYLCKMEEEGIP-PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Query: 449 PNG 451
P+G
Sbjct: 688 PDG 690
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/455 (20%), Positives = 190/455 (41%), Gaps = 85/455 (18%)
Query: 183 AVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHE 242
+T+N M+D ++G+ ++V K++ EMK + + V +++ +G + + H
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 243 FIMDNGLALSAHLQSALV-------------------------------NMYV----NCG 267
+ +G A++ + + L+ N+Y+ + G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Query: 268 AMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKD----LVCWSAMIS 323
+D AREL +++ +V ++ GY K G +A +FD + D +V ++ +I
Sbjct: 358 RIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLID 417
Query: 324 GYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNG--- 380
G ES + A +L EM + I PD IT + + G L+ A ++ + G
Sbjct: 418 GLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKP 477
Query: 381 --------------FGRS-------------------LSVNNALIDMYAKCGNLIRAKEV 407
G S L++ N ID K GNL++A E
Sbjct: 478 DGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEF 537
Query: 408 FENMPRKNV----ISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
+ R + ++++++I + +G A NL+ M + + P+ + + ++Y +
Sbjct: 538 QRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAK 597
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELI---ESMPFAPNVI 520
AG +E+ + +S+ + + G+ P + ++ C+A + +A + E PN
Sbjct: 598 AGRLEQAFQ-YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKY 656
Query: 521 IWGSLMSA-CQVHGEVELGEFAAKQILELEPDHDG 554
+ L+S C E+ + K++L+ E + DG
Sbjct: 657 SYTMLISKNCDFEKWEEVVKL-YKEMLDKEIEPDG 690
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 144/351 (41%), Gaps = 24/351 (6%)
Query: 205 LYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYV 264
+YE M P + T+L +C +G+L I + + S + L+N +
Sbjct: 225 VYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFS 284
Query: 265 NCGAMDLARELYDKLSSKHLVVS----TAMLSGYAKHGMVKDARFIFDQIVEKDLV---- 316
G M+ AR + + V+ ++ GY K G+ DA + D+++ +
Sbjct: 285 KNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTS 344
Query: 317 CWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYA 376
++ I + + +A +L + M PD ++ + + +G +A +
Sbjct: 345 TYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDL 400
Query: 377 DKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAFAMHGYA 432
S+ N LID + GNL A+ + E M + +VI++++++ F +G
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 433 NSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGC 492
+ A ++ M + I+P+G + G ++ +L M+ AP Y
Sbjct: 461 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 493 MVDLYCRANLLRKAMEL---IESMPFAPNVIIWGSLMSACQVHGEVELGEF 540
+D C+ L KA+E I + P+ + + ++ + G +E G+F
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV-----IRGYLENGQF 566
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 109/266 (40%), Gaps = 18/266 (6%)
Query: 299 MVKDARFIFDQIVEKDL----VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITML 354
M+ A +++ ++E + + ++ M+ ++ + K++ EM+ RNI ++T
Sbjct: 218 MMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYN 277
Query: 355 SAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK 414
I+ + G + +AR H ++GF + N LI+ Y K G A V + M
Sbjct: 278 ILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA 337
Query: 415 NVISWSSMIN----AFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEG 470
+ +S N A G + A L M D+ V + +++ G E
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDV----VSYNTLMHGYIKMGKFVEA 393
Query: 471 QKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP---FAPNVIIWGSLMS 527
LF + I P Y ++D C + L A L E M P+VI + +L+
Sbjct: 394 SLLFDDL-RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 452
Query: 528 ACQVHGEVELGEFAAKQILE--LEPD 551
+G + + ++L ++PD
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKGIKPD 478
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 81/179 (45%), Gaps = 8/179 (4%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D +N+ IDG C+ GN + ++ ++ PD V TV+ +G + ++
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 573
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSK----HLVVSTAMLSGYAKH 297
+ ++ L S L+ + G ++ A + ++ + +++ A+L G K
Sbjct: 574 DEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKA 633
Query: 298 GMVKDARFIFDQIVEKDL----VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQIT 352
G + +A ++ E+ + ++ +IS + ++ +E +KL+ EM + I PD T
Sbjct: 634 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 160/372 (43%), Gaps = 28/372 (7%)
Query: 173 LVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSG 232
LV D + VT+ +I+G+C+ G D+ L++ M+ +PD + T++ +G
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 233 NLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKL----SSKHLVVST 288
L G + + G+ L + S+ +++YV G + A +Y ++ S ++V T
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 289 AMLSGYAKHGMVKDARFIFDQIV----EKDLVCWSAMISGYAESDQPQEALKLFNEMQLR 344
++ G + G + +A ++ QI+ E +V +S++I G+ + + L+ +M
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 345 NIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRA 404
PD + + + G + A ++ V N+LID + + A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 405 KEVFENM----------PRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGV-- 452
+VF M V+ S M +AF H + LF M+ I +
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575
Query: 453 -IFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKA---ME 508
+ I +L+ C +E+ K F+++I E + P Y M+ YC L +A E
Sbjct: 576 NVVIHLLFKCHR---IEDASKFFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 631
Query: 509 LIESMPFAPNVI 520
L++ PF PN +
Sbjct: 632 LLKVTPFGPNTV 643
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 156/376 (41%), Gaps = 48/376 (12%)
Query: 195 QSGNYDQVLKLYEEMKTSDTKPDGVI-----------LCTVLSACGHSGNLSYG---KAI 240
++G +D K+++EM T+ K V+ +C L C YG KA+
Sbjct: 111 RNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMEC----CCRYGMVDKAL 166
Query: 241 HEFIMDNGLALSAHLQSA--LVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHG 298
F+ L + S ++N + +DL + +DKL + S G + HG
Sbjct: 167 EIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPS-----GVSAHG 221
Query: 299 MVKDA--------------RFIFDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQLR 344
V DA R + ++ +V + ++ G + DQ + A +L + +
Sbjct: 222 FVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDC 280
Query: 345 NIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRA 404
P+ +T + I+ G + +A + ++ G L + LID Y K G L
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 405 KEVFENMPRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYA 460
++F K +V+ +SS I+ + G +A ++ RM + I PN V + ++
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 461 CSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIES---MPFAP 517
G + E ++ ++ + G+ P Y ++D +C+ LR L E M + P
Sbjct: 401 LCQDGRIYEAFGMYGQIL-KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 518 NVIIWGSLMSACQVHG 533
+V+I+G L+ G
Sbjct: 460 DVVIYGVLVDGLSKQG 475
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 170/411 (41%), Gaps = 33/411 (8%)
Query: 127 VSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACR--RIMDARLVFDKMSHR--- 181
++ AS +Y + G++ P + T I + C+ RI +A ++ ++ R
Sbjct: 372 LATASVVYKRMLCQGIS--------PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 182 -DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAI 240
VT++ +IDG+C+ GN LYE+M PD VI ++ G + +
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 241 HEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELY----------DKLSSKHLVVSTAM 290
++ + L+ + ++L++ + D A +++ D + ++ + M
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 291 LSGYAKHGMVKDARFIFDQI----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNI 346
+ KH +FD + + D+ + +I + + ++A K FN + +
Sbjct: 544 EDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 603
Query: 347 VPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKE 406
PD +T + I ++ L +A I FG + LI + K ++ A
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663
Query: 407 VFENMPRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACS 462
+F M K N +++ +++ F+ + LF M+E+ I P+ V + ++
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723
Query: 463 HAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
G V+E +F I+ + P Y ++ YC+ L +A L E M
Sbjct: 724 KRGRVDEATNIFHQAIDAK-LLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 12/251 (4%)
Query: 135 LGLEIHGLASKLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKM----SHRDAVTWNIMI 190
+GL++ L + +D + +I + C RI DA F+ + D VT+N MI
Sbjct: 555 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 191 DGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLA 250
GYC D+ +++E +K + P+ V L ++ + ++ + + + G
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Query: 251 LSAHLQSALVNMYVNC----GAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFI 306
+A L++ + G+ L E+ +K S +V + ++ G K G V +A I
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 307 FDQIVE----KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACAN 362
F Q ++ D+V ++ +I GY + + EA L+ M + PD + +
Sbjct: 735 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPP 794
Query: 363 VGALAQARWIH 373
+++ W+H
Sbjct: 795 KWLMSKGVWVH 805
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 157/366 (42%), Gaps = 16/366 (4%)
Query: 185 TWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFI 244
T NIM+D C+S D+ ++EEM PD + C+++ G G + ++E +
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Query: 245 MDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYA----KHGMV 300
+D+ ++ + ++L+ + N G + ++Y + +++ +L+ Y K G
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533
Query: 301 KDARFIFDQIVEKDLV----CWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSA 356
+ R +F++I + V +S +I G ++ E +LF M+ + V D
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 357 ISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK-- 414
I G + +A + GF ++ ++ID AK L A +FE K
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 415 --NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQK 472
NV+ +SS+I+ F G + A + + ++ + PN + +L A A + E
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 473 LFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP---FAPNVIIWGSLMSAC 529
F SM E P YG +++ C+ KA + M P+ I + +++S
Sbjct: 714 CFQSM-KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 530 QVHGEV 535
G +
Sbjct: 773 AKAGNI 778
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 188/411 (45%), Gaps = 37/411 (9%)
Query: 127 VSKASALYLGLEIHGLASKLGFHSDPFIQTGLIAMYSACR--RIMDARLVFDKMSHR--- 181
+ +A L E+ K G P ++T I + C+ ++ +A +F++M ++
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLF--PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 182 -DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAI 240
D +T+ +IDG + G D K+YE+M SD + + ++ +++ + G G I
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 241 HEFIMDNGLALSAHLQSALVNMYVNC----GAMDLARELYDKLSSKHLVVS----TAMLS 292
++ +++ S LQ L+N Y++C G + R +++++ ++ V + ++
Sbjct: 505 YKDMINQN--CSPDLQ--LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 293 GYAKHGMVKDARFIFDQIVEK----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVP 348
G K G + +F + E+ D ++ +I G+ + + +A +L EM+ + P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 349 DQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVF 408
+T S I A + L +A + A ++ + ++LID + K G + A +
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 409 ENMPRK----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHA 464
E + +K N+ +W+S+++A N A+ F MKE PN V + G+L
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY-GILI----N 735
Query: 465 GL--VEEGQK--LFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIE 511
GL V + K +F + + G+ P Y M+ +A + +A L +
Sbjct: 736 GLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/501 (20%), Positives = 200/501 (39%), Gaps = 67/501 (13%)
Query: 145 KLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYD 200
+LG+ + T LI ++ R+ A + D+M D V +N+ ID + + G D
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255
Query: 201 QVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALV 260
K + E++ + KPD V +++ + L + E + N + + ++
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 261 NMYVNCGAMDLARELYDKLSSK----HLVVSTAMLSGYAKHGMVKDARFIFDQIVEK--- 313
Y + G D A L ++ +K ++ +L+ K G V +A +F+++ +
Sbjct: 316 MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP 375
Query: 314 ---------DLVCWSA--------------------------MISGYAESDQPQEALKLF 338
D++C + M+ +S + EA +F
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 339 NEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKC 398
EM + PD+IT S I VG + A ++ + + V +LI +
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 399 GNLIRAKEVFENMPRKNVISWSSMINAFA----MHGYANSAMNLFHRMKEEDIEPNGVIF 454
G +++++M +N ++N + G +F +K P+ +
Sbjct: 496 GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSY 555
Query: 455 IGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP 514
+++ AG E +LF SM E G Y ++D +C+ + KA +L+E M
Sbjct: 556 SILIHGLIKAGFANETYELFYSM-KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 515 ---FAPNVIIWGSLMSACQVHGEVE----LGEFAAKQILELEPDHDGALVVLSNI---YA 564
F P V+ +GS++ ++ L E A + +EL +V+ S++ +
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN------VVIYSSLIDGFG 668
Query: 565 KERRWNDVGLIRQSMANKGIS 585
K R ++ LI + + KG++
Sbjct: 669 KVGRIDEAYLILEELMQKGLT 689
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 38/269 (14%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D +NI+IDG+C+ G ++ +L EEMKT +P V +YG I
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV---------------TYGSVI- 629
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVK 301
+GLA L A + L E K ++V+ ++++ G+ K G +
Sbjct: 630 -----DGLAKIDRLDEAYM----------LFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 302 DARFIFDQIVEK----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAI 357
+A I +++++K +L W++++ ++++ EAL F M+ P+Q+T I
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 358 SACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVI 417
+ V +A K G S +I AK GN+ A +F+ +
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 418 SWSSMINAFAMHGYANS--AMNLFHRMKE 444
S+ NA + G +N AM+ F +E
Sbjct: 795 PDSACYNAM-IEGLSNGNRAMDAFSLFEE 822
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 39/201 (19%)
Query: 154 IQTGLIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQVLKLYEEM 209
I + LI + RI +A L+ +++ + + TWN ++D ++ ++ L ++ M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 210 KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAM 269
K P+ V +YG I+ NGL A V
Sbjct: 719 KELKCTPNQV---------------TYG------ILINGLCKVRKFNKAFV--------- 748
Query: 270 DLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK----DLVCWSAMISGY 325
+E+ + + T M+SG AK G + +A +FD+ D C++AMI G
Sbjct: 749 -FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Query: 326 AESDQPQEALKLFNEMQLRNI 346
+ ++ +A LF E + R +
Sbjct: 808 SNGNRAMDAFSLFEETRRRGL 828
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 170/353 (48%), Gaps = 20/353 (5%)
Query: 161 MYSACR-RIMD-ARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDT 214
M CR + MD AR+VF + + + T++I+IDG ++ + L++ M +S+
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544
Query: 215 KPDGVILCTVLSACGHSGNLSYGKAI-HEFIMDNGLALSAHLQSALVNMYVNCGAMDLAR 273
+ +GV+ T+++ G S + + I + L +S +++++ + G MD A
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAV 604
Query: 274 ELYDKLS----SKHLVVSTAMLSGYAKHGMVKDARFIFDQI----VEKDLVCWSAMISGY 325
Y+++ S +++ T++++G K+ + A + D++ V+ D+ + A+I G+
Sbjct: 605 AAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF 664
Query: 326 AESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSL 385
+ + A LF+E+ + P Q S IS N+G + A ++ K+G L
Sbjct: 665 CKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDL 724
Query: 386 SVNNALIDMYAKCGNLIRAKEVFENMPRKNVIS----WSSMINAFAMHGYANSAMNLFHR 441
LID K GNLI A E++ M ++ ++ ++N + G + +F
Sbjct: 725 GTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEE 784
Query: 442 MKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMV 494
MK+ ++ PN +I+ V+ G ++E +L M+++ GI P + +V
Sbjct: 785 MKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK-GILPDGATFDILV 836
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 16/233 (6%)
Query: 152 PFIQTGLIAMYSACR--RIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQVLKL 205
P + T M C+ R+ A + D+M ++ D + +IDG+C+ N + L
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASAL 676
Query: 206 YEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVN 265
+ E+ P I +++S + GN+ +++ ++ +GL + L++ +
Sbjct: 677 FSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 736
Query: 266 CGAMDLARELYDKLSSKHLV----VSTAMLSGYAKHGMVKDARFIFDQI----VEKDLVC 317
G + LA ELY ++ + LV + T +++G +K G +F+++ V +++
Sbjct: 737 DGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLI 796
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQAR 370
++A+I+G+ EA +L +EM + I+PD T I VG L R
Sbjct: 797 YNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF--DILVSGQVGNLQPVR 847
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/473 (20%), Positives = 190/473 (40%), Gaps = 64/473 (13%)
Query: 80 PDTHFCNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEI 139
P + N+ L L + + LY ++ +G +A + LE+
Sbjct: 196 PFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEV 255
Query: 140 HGLASKLGFHSDPFIQTGLIAMYSACRRIMD---ARLVFDKMSHRDAV-----TWNIMID 191
A + G D + + + AC + +D A + +M + T+ +I
Sbjct: 256 LSRAIERGAEPDSLLYSLAV---QACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVIL 312
Query: 192 GYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLAL 251
+ GN D ++L +EM + + V ++++ + +L + + + G +
Sbjct: 313 ASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSP 372
Query: 252 SAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVST----AMLSGYAKHGMVKDARFIF 307
++ S L+ + G M+ A E Y K+ L S ++ G+ K ++A +F
Sbjct: 373 NSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLF 432
Query: 308 DQIVEKDL----VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANV 363
D+ E L VC + ++S + + EA +L ++M+ R I P+ +
Sbjct: 433 DESFETGLANVFVC-NTILSWLCKQGKTDEATELLSKMESRGIGPNVV------------ 479
Query: 364 GALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISW 419
S NN ++ + + N+ A+ VF N+ K N ++
Sbjct: 480 ----------------------SYNNVMLG-HCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 420 SSMINA-FAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI 478
S +I+ F H N A+ + + M +IE NGV++ ++ G + ++L ++MI
Sbjct: 517 SILIDGCFRNHDEQN-ALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Query: 479 NEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSA 528
E + Y ++D + + + A+ E M +PNVI + SLM+
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 179/389 (46%), Gaps = 24/389 (6%)
Query: 167 RIMDARLVFDKMS----HRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILC 222
R+++A + +KM H D VT+ +++G C+ G+ L L +M+ + KPD VI
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 223 TVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCG----AMDLARELYDK 278
++ G+ S + + +++ G+A + + +++ + + G A L R++ ++
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 279 LSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEK----DLVCWSAMISGYAESDQPQEA 334
+ ++ A++S K G + +A + D+++ + D V +++MI G+ + ++ +A
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 335 LKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDM 394
+F+ M PD +T + I + + + + G + + N LI
Sbjct: 421 KHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 395 YAKCGNLIRAKEVFENMPRKNV----ISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPN 450
+ + NL A+++F+ M V I+ + ++ F + A+ LF ++ I+ +
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 451 GVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELI 510
V + +++ V+E LF S+ HG+ P + Y M+ +C + + A L
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSL-PIHGVEPDVQTYNVMISGFCGKSAISDANVLF 595
Query: 511 ESMP---FAPNVIIWGSLMSACQVHGEVE 536
M P+ + +L+ C GE++
Sbjct: 596 HKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/532 (20%), Positives = 201/532 (37%), Gaps = 71/532 (13%)
Query: 85 CNQLLRLLSRSPTPQNTLFLYQKLRRVGXXXXXXXXXXXXKAVSKASALYLGLEIHGLAS 144
CN+++ + R P + LY+K+ K L L G +
Sbjct: 109 CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 145 KLGFHSDPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVL- 203
KLGF D VT+N ++ G C + L
Sbjct: 169 KLGFQPD-------------------------------VVTFNTLLHGLCLEDRISEALA 197
Query: 204 --------------KLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGL 249
L+++M P + T+++ G + A+ ++ GL
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 250 ALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL----VVSTAMLSGYAKHGMVKDARF 305
+ +VN G A L K+ H+ V+ +A++ K G DA++
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 306 IFDQIVEK----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACA 361
+F +++EK ++ ++ MI G+ + +A +L +M R I PD +T + ISA
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 362 NVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNVISWSS 421
G L +A + N++I + K AK +F+ M +V+++++
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT 437
Query: 422 MINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEH 481
+I+ + + M L + + N + +++ + Q LF MI+ H
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS-H 496
Query: 482 GIAPRHEHYGCMVDLY--CRANLLRKAMELIESM--------PFAPNVIIWGSLMSACQV 531
G+ P + C + LY C L +A+EL E + A N+II G + +V
Sbjct: 497 GVCP--DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG-MCKGSKV 553
Query: 532 HGEVELGEFAAKQILELEPDHDGALVVLSNIYAKERRWNDVGLIRQSMANKG 583
+L F + I +EPD V++S K +D ++ M + G
Sbjct: 554 DEAWDL--FCSLPIHGVEPDVQTYNVMISGFCGKS-AISDANVLFHKMKDNG 602
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 135/316 (42%), Gaps = 38/316 (12%)
Query: 318 WSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYAD 377
++ +I + + + +L F ++ PD +T + + +++A + Y
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 378 KNGFGRSLSV---------------NNALIDMYAKCGNLIRAKEVFENMPRK----NVIS 418
+ GF ++++ N LI+ G ++ A + M K +V++
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 419 WSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMI 478
+ +++N G SA+NL +M+E I+P+ VI+ ++ G + Q LFS M+
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 479 NEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM---PFAPNVIIWGSLMSACQVHGEV 535
E GIAP Y CM+D +C A L+ M P+V+ + +L+SA G++
Sbjct: 324 -EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 536 ELGEFAAKQILE--LEPDHDGALVVLSNIYA--KERRWNDVGLIRQSMANKGISKEKASS 591
E ++L + PD + S IY K R++D + MA+ +
Sbjct: 383 FEAEKLCDEMLHRCIFPD---TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV------- 432
Query: 592 RVEINNEVHVFMMADR 607
V N + V+ A R
Sbjct: 433 -VTFNTIIDVYCRAKR 447
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 124/279 (44%), Gaps = 14/279 (5%)
Query: 161 MYSACR--RIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDG 218
+Y C+ R DA+ +FD M+ D VT+N +ID YC++ D+ ++L E+ +
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 219 VILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDK 278
T++ NL+ + + + ++ +G+ + L+ + ++ A EL++
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 279 LSSKHLVVSTA----MLSGYAKHGMVKDARFIFDQI----VEKDLVCWSAMISGYAESDQ 330
+ + + T ++ G K V +A +F + VE D+ ++ MISG+
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 331 PQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNA 390
+A LF++M+ PD T + I C G + ++ + + NGF S +
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF----SGDAF 643
Query: 391 LIDMYAKCGNLIRAKEVFENMPRKNVISWSSMINAFAMH 429
I M + + +E+ EN R + +S I + +
Sbjct: 644 TIKMAEEIICRVSDEEIIENYLRPKINGETSSIPRYVVE 682
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 150/340 (44%), Gaps = 44/340 (12%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D VT+ +++G C G Q L L + M +P G I+
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTII-------------------- 48
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVK 301
NGL +SAL +L ++ + H+V+ A++ K G
Sbjct: 49 -----NGLCKMGDTESAL----------NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHI 93
Query: 302 DARFIFDQIVEK----DLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAI 357
A+ +F ++ +K D++ +S MI + S + +A +L +M R I PD +T + I
Sbjct: 94 HAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALI 153
Query: 358 SACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK--- 414
+A G +++A I+ + G + N++ID + K L AK + ++M K
Sbjct: 154 NALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCS 213
Query: 415 -NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKL 473
+V+++S++IN + ++ M +F M I N V + +++ G ++ Q L
Sbjct: 214 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 273
Query: 474 FSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM 513
+ MI+ G+AP + + M+ C LRKA ++E +
Sbjct: 274 LNVMISS-GVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/330 (19%), Positives = 144/330 (43%), Gaps = 50/330 (15%)
Query: 152 PFIQTGLIAMYSAC--RRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEM 209
P + T M C R++ A + D+M + +I+G C+ G+ + L L +M
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKM 67
Query: 210 KTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCG-- 267
+ + K VI ++ G+ + + + + D G+ S +++ + G
Sbjct: 68 EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRW 127
Query: 268 --AMDLARELYDKLSSKHLVVSTAMLSGYAKHGMVKDARFIFDQIVEKDL----VCWSAM 321
A L R++ ++ + +V +A+++ K G V +A I+ ++ + + + +++M
Sbjct: 128 TDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSM 187
Query: 322 ISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGF 381
I G+ + D+ +A ++ + M ++ PD +T + I NG+
Sbjct: 188 IDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI---------------------NGY 226
Query: 382 GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAFAMHGYANSAMN 437
++ V+N + E+F M R+ N ++++++I+ F G ++A +
Sbjct: 227 CKAKRVDNGM--------------EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQD 272
Query: 438 LFHRMKEEDIEPNGVIFIGVLYA-CSHAGL 466
L + M + PN + F +L + CS L
Sbjct: 273 LLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 13/206 (6%)
Query: 399 GNLIRAKEVFENMPRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVL 458
G +++A + + M + + ++IN G SA+NL +M+E I+ + VI+ ++
Sbjct: 24 GRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAII 83
Query: 459 YACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESM---PF 515
G Q LF+ M ++ GI P Y M+D +CR+ A +L+ M
Sbjct: 84 DRLCKDGHHIHAQNLFTEM-HDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI 142
Query: 516 APNVIIWGSLMSACQVHGEVE-----LGEFAAKQILELEPDHDGALVVLSNIYAKERRWN 570
P+V+ + +L++A G+V G+ + I ++ + + + K+ R N
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI----DGFCKQDRLN 198
Query: 571 DVGLIRQSMANKGISKEKASSRVEIN 596
D + SMA+K S + + IN
Sbjct: 199 DAKRMLDSMASKSCSPDVVTFSTLIN 224
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/541 (20%), Positives = 215/541 (39%), Gaps = 83/541 (15%)
Query: 158 LIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPD 217
IA+ +R D LV S D +N +++ G+ D+ KL+EEM D +PD
Sbjct: 213 FIAITRRVKRFGDQSLV--GQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPD 270
Query: 218 GVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYD 277
+ ++ C G + E I+D G+ + +LV YV G + A +
Sbjct: 271 VLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQ 330
Query: 278 KLSSKHLVVSTAM---------------------------LSGYAKHGMVKDARFI---- 306
+ K + + SGY+ V + +
Sbjct: 331 AMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFK 390
Query: 307 ---------------FDQIVEKDLVCWSAMISGYAESDQPQEALKLFNEMQL---RNIVP 348
++ D ++ ++ GY ++ + + ++ M+ RN P
Sbjct: 391 KLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHP 450
Query: 349 DQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVF 408
D++T + +SA N G + +AR + + G + N L+ Y K + RA+++
Sbjct: 451 DEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLL 510
Query: 409 ENMPRK-----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSH 463
M +V+S++ +I+ + + A+ F+ M+ I P + + ++ A +
Sbjct: 511 REMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAM 570
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP---FAPNVI 520
+G + ++F M+N+ + + +V+ YCR L+ A ++ M F PNV
Sbjct: 571 SGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVA 630
Query: 521 IWGSL---MSACQVHGEV-----ELGEFAAKQILE-------------LEPDHDGALVVL 559
+GSL +S + G+ E+ E A + E L+PD +G L L
Sbjct: 631 TYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPD-EGLLDTL 689
Query: 560 SNIYAKERRWNDVGLIRQSMANKGISKEKASSRVEINNEVHVFMMADRYHKQSREIYKKL 619
++I + + I M GI K + +I E+H M ++ Q+R I +++
Sbjct: 690 ADICVRAAFFKKALEIIACMEENGIPPNKTKYK-KIYVEMHSRMFTSKHASQAR-IDRRV 747
Query: 620 E 620
E
Sbjct: 748 E 748
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 171/371 (46%), Gaps = 55/371 (14%)
Query: 177 KMSHR----DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSG 232
KM R DAV ++I+IDG C+ G+ D L+ EM+ K D + T++ ++G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 233 NLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVST---- 288
G + ++ ++ + S L++ +V G + A +L ++ + + +T
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 289 AMLSGYAKHGMVKDARFIFDQIVEK----DLVCWSAMISGYAESDQPQEALKLFNEMQLR 344
+++ G+ K +++A + D ++ K D++ ++ +I+GY ++++ + L+LF EM LR
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 345 NIVPDQITMLSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRA 404
++ + +T N L+ + + G L A
Sbjct: 433 GVIANTVTY-----------------------------------NTLVQGFCQSGKLEVA 457
Query: 405 KEVFENM----PRKNVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYA 460
K++F+ M R +++S+ +++ +G A+ +F ++++ +E + I++ +++
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Query: 461 CSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP---FAP 517
+A V++ LF S+ G+ Y M+ CR + L KA L M AP
Sbjct: 518 MCNASKVDDAWDLFCSL-PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAP 576
Query: 518 NVIIWGSLMSA 528
+ + + L+ A
Sbjct: 577 DELTYNILIRA 587
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 155/340 (45%), Gaps = 13/340 (3%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D V +N +++G C + L+L + M KP + L T+++ +G +S +
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHL----VVSTAMLSGYAKH 297
+ +++ G + ++N+ G LA EL K+ +++ V + ++ G K
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 298 GMVKDARFIFDQI----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM 353
G + +A +F+++ + D++ ++ +I G+ + + + KL +M R I P+ +T
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
I + G L +A + + G + N+LID + K L A ++ + M
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 414 K----NVISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEE 469
K ++++++ +IN + + + LF M + N V + ++ +G +E
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 470 GQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMEL 509
+KLF M++ + P Y ++D C L KA+E+
Sbjct: 457 AKKLFQEMVSRR-VRPDIVSYKILLDGLCDNGELEKALEI 495
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 140/326 (42%), Gaps = 13/326 (3%)
Query: 200 DQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSAL 259
D + L+ +M S P + + SA + A+ + + G+A S + S +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 260 VNMYVNCGAMDLARELYDKLS----SKHLVVSTAMLSGYAKHGMVKDARFIFDQIVE--- 312
+N + C + A K+ V+ +L+G V +A + D++VE
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 313 -KDLVCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARW 371
L+ + +++G + + +A+ L + M P+++T ++ G A A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 372 IHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPRK----NVISWSSMINAFA 427
+ ++ + +ID K G+L A +F M K ++I+++++I F
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 428 MHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRH 487
G + L M + I PN V F ++ + G + E +L M+ + GIAP
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM-QRGIAPNT 368
Query: 488 EHYGCMVDLYCRANLLRKAMELIESM 513
Y ++D +C+ N L +A+++++ M
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLM 394
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 14/206 (6%)
Query: 151 DPFIQTG--LIAMYSACRRIMDARLVFDKMSHR----DAVTWNIMIDGYCQSGNYDQVLK 204
DP I T LI Y RI D +F +MS R + VT+N ++ G+CQSG + K
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 205 LYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYV 264
L++EM + +PD V +L +G L I I + + L + +++
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 265 NCGAMDLARELYDKLSSKHLVVST----AMLSGYAKHGMVKDARFIFDQIVEK----DLV 316
N +D A +L+ L K + + M+S + + A +F ++ E+ D +
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 317 CWSAMISGYAESDQPQEALKLFNEMQ 342
++ +I + D A +L EM+
Sbjct: 580 TYNILIRAHLGDDDATTAAELIEEMK 605
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 10/233 (4%)
Query: 173 LVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSG 232
L+ K D +T+NI+I+GYC++ D L+L+ EM + V T++ SG
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 233 NLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLVVSTA--- 289
L K + + ++ + L++ + G ++ A E++ K+ + +
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 290 -MLSGYAKHGMVKDARFIFDQI----VEKDLVCWSAMISGYAESDQPQEALKLFNEMQLR 344
++ G V DA +F + V+ D ++ MIS D +A LF +M
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 345 NIVPDQITMLSAISA-CANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYA 396
PD++T I A + A A I +GF +S +I+M +
Sbjct: 573 GHAPDELTYNILIRAHLGDDDATTAAELIEEMK-SSGFPADVSTVKMVINMLS 624
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 169/401 (42%), Gaps = 23/401 (5%)
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMK 210
D FI+ G S + I L+ K + T+N +I GYC++G D +L +EM
Sbjct: 373 DSFIEAG-----SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 211 TSDTKPD-GVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAM 269
+ + G + C H S + + E ++ N ++ L + L++ G
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN-MSPGGGLLTTLISGLCKHGKH 486
Query: 270 DLARELYDKLSSKHLVVST----AMLSGYAKHGMVKDARFIFDQIVEK----DLVCWSAM 321
A EL+ + +K VV T A+L G + G + +A I +I+ + D V ++ +
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 322 ISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGF 381
ISG + EA +EM R + PD T I N+ + +A +NG
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 382 GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNV----ISWSSMINAFAMHGYANSAMN 437
+ + +ID K +E F+ M KNV + ++ +I A+ G + A+
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLY 497
L MK + I PN + ++ S VEE + LF M E G+ P HY ++D Y
Sbjct: 667 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGY 725
Query: 498 CRANLLRKAMELIESM---PFAPNVIIWGSLMSACQVHGEV 535
+ + K L+ M PN I + ++ G V
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 134/303 (44%), Gaps = 12/303 (3%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D T N ++ G C++G D+ ++ +E+ D V T++S C L
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLV----VSTAMLSGYAKH 297
+ ++ GL + S L+ N ++ A + +D ++ + M+ G K
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 298 GMVKDARFIFDQIVEKDL----VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM 353
++ + FD+++ K++ V ++ +I Y S + AL+L +M+ + I P+ T
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
S I + + + +A+ + G ++ ALID Y K G +++ + + M
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743
Query: 414 KNV----ISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEE 469
KNV I+++ MI +A G A L + M+E+ I P+ + + +Y G V E
Sbjct: 744 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 803
Query: 470 GQK 472
K
Sbjct: 804 AFK 806
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 116/559 (20%), Positives = 219/559 (39%), Gaps = 96/559 (17%)
Query: 129 KASALYLGLEIHG-LASKLGFHSDPFIQTGLIAMYSA--CRRIMDARLVFDKMSHRDAVT 185
K YL L++ LA+K F S L ++ A ++ +A V K D
Sbjct: 203 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYL 262
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSG------------- 232
+ I+ +C+ G ++ +KL+ +M+ + P+ V TV+ G G
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 233 ----------------NLSYGKAIHE--FIM----DNGLALSAHLQSALVNMYVNCGAMD 270
L+ K I + F++ G + + + L++ ++ G+++
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 271 LARELYDKLSSKHLVVSTA----MLSGYAKHGMVKDARFIFDQIVEKDLVC----WSAMI 322
A E+ D + SK L ++++ ++ GY K+G +A + +++ ++++I
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 323 SGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFG 382
AL+ EM LRN+ P + + IS G ++A + GF
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 383 RSLSVNNALIDMYAKCGNLIRA----KEVFENMPRKNVISWSSMINAFAMHGYANSAMNL 438
+NAL+ + G L A KE+ + +S++++I+ + A
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 439 FHRMKEEDIEPNGV---IFIGVLY--------------------------------ACSH 463
M + ++P+ I I L+ C
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP---FAPNVI 520
A EEGQ+ F M++++ + P Y ++ YCR+ L A+EL E M +PN
Sbjct: 623 AERTEEGQEFFDEMMSKN-VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 521 IWGSLMSACQVHGEVELGE--FAAKQILELEPD--HDGALVVLSNIYAKERRWNDVGLIR 576
+ SL+ + VE + F ++ LEP+ H AL+ + Y K + V +
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI---DGYGKLGQMVKVECLL 738
Query: 577 QSMANKGISKEKASSRVEI 595
+ M +K + K + V I
Sbjct: 739 REMHSKNVHPNKITYTVMI 757
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 169/401 (42%), Gaps = 23/401 (5%)
Query: 151 DPFIQTGLIAMYSACRRIMDARLVFDKMSHRDAVTWNIMIDGYCQSGNYDQVLKLYEEMK 210
D FI+ G S + I L+ K + T+N +I GYC++G D +L +EM
Sbjct: 373 DSFIEAG-----SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 211 TSDTKPD-GVILCTVLSACGHSGNLSYGKAIHEFIMDNGLALSAHLQSALVNMYVNCGAM 269
+ + G + C H S + + E ++ N ++ L + L++ G
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN-MSPGGGLLTTLISGLCKHGKH 486
Query: 270 DLARELYDKLSSKHLVVST----AMLSGYAKHGMVKDARFIFDQIVEK----DLVCWSAM 321
A EL+ + +K VV T A+L G + G + +A I +I+ + D V ++ +
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 322 ISGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGF 381
ISG + EA +EM R + PD T I N+ + +A +NG
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 382 GRSLSVNNALIDMYAKCGNLIRAKEVFENMPRKNV----ISWSSMINAFAMHGYANSAMN 437
+ + +ID K +E F+ M KNV + ++ +I A+ G + A+
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 438 LFHRMKEEDIEPNGVIFIGVLYACSHAGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLY 497
L MK + I PN + ++ S VEE + LF M E G+ P HY ++D Y
Sbjct: 667 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGY 725
Query: 498 CRANLLRKAMELIESM---PFAPNVIIWGSLMSACQVHGEV 535
+ + K L+ M PN I + ++ G V
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 134/303 (44%), Gaps = 12/303 (3%)
Query: 182 DAVTWNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSGNLSYGKAIH 241
D T N ++ G C++G D+ ++ +E+ D V T++S C L
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 242 EFIMDNGLALSAHLQSALVNMYVNCGAMDLARELYDKLSSKHLV----VSTAMLSGYAKH 297
+ ++ GL + S L+ N ++ A + +D ++ + M+ G K
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 298 GMVKDARFIFDQIVEKDL----VCWSAMISGYAESDQPQEALKLFNEMQLRNIVPDQITM 353
++ + FD+++ K++ V ++ +I Y S + AL+L +M+ + I P+ T
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683
Query: 354 LSAISACANVGALAQARWIHTYADKNGFGRSLSVNNALIDMYAKCGNLIRAKEVFENMPR 413
S I + + + +A+ + G ++ ALID Y K G +++ + + M
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743
Query: 414 KNV----ISWSSMINAFAMHGYANSAMNLFHRMKEEDIEPNGVIFIGVLYACSHAGLVEE 469
KNV I+++ MI +A G A L + M+E+ I P+ + + +Y G V E
Sbjct: 744 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 803
Query: 470 GQK 472
K
Sbjct: 804 AFK 806
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 116/559 (20%), Positives = 219/559 (39%), Gaps = 96/559 (17%)
Query: 129 KASALYLGLEIHG-LASKLGFHSDPFIQTGLIAMYSA--CRRIMDARLVFDKMSHRDAVT 185
K YL L++ LA+K F S L ++ A ++ +A V K D
Sbjct: 203 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYL 262
Query: 186 WNIMIDGYCQSGNYDQVLKLYEEMKTSDTKPDGVILCTVLSACGHSG------------- 232
+ I+ +C+ G ++ +KL+ +M+ + P+ V TV+ G G
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 233 ----------------NLSYGKAIHE--FIM----DNGLALSAHLQSALVNMYVNCGAMD 270
L+ K I + F++ G + + + L++ ++ G+++
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 271 LARELYDKLSSKHLVVSTA----MLSGYAKHGMVKDARFIFDQIVEKDLVC----WSAMI 322
A E+ D + SK L ++++ ++ GY K+G +A + +++ ++++I
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 323 SGYAESDQPQEALKLFNEMQLRNIVPDQITMLSAISACANVGALAQARWIHTYADKNGFG 382
AL+ EM LRN+ P + + IS G ++A + GF
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 383 RSLSVNNALIDMYAKCGNLIRA----KEVFENMPRKNVISWSSMINAFAMHGYANSAMNL 438
+NAL+ + G L A KE+ + +S++++I+ + A
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 439 FHRMKEEDIEPNGV---IFIGVLY--------------------------------ACSH 463
M + ++P+ I I L+ C
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 464 AGLVEEGQKLFSSMINEHGIAPRHEHYGCMVDLYCRANLLRKAMELIESMP---FAPNVI 520
A EEGQ+ F M++++ + P Y ++ YCR+ L A+EL E M +PN
Sbjct: 623 AERTEEGQEFFDEMMSKN-VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 521 IWGSLMSACQVHGEVELGE--FAAKQILELEPD--HDGALVVLSNIYAKERRWNDVGLIR 576
+ SL+ + VE + F ++ LEP+ H AL+ + Y K + V +
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI---DGYGKLGQMVKVECLL 738
Query: 577 QSMANKGISKEKASSRVEI 595
+ M +K + K + V I
Sbjct: 739 REMHSKNVHPNKITYTVMI 757