Miyakogusa Predicted Gene
- Lj1g3v0052610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0052610.1 Non Chatacterized Hit- tr|A5C7H7|A5C7H7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,32.74,5e-18,DUF3049,Protein of unknown function DUF3049;
seg,NULL,CUFF.25167.1
(303 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G19260.1 | Symbols: | Protein of unknown function (DUF3049) ... 102 4e-22
AT4G02810.1 | Symbols: | Protein of unknown function (DUF3049) ... 73 2e-13
AT1G03170.1 | Symbols: | Protein of unknown function (DUF3049) ... 70 2e-12
AT3G06020.1 | Symbols: | Protein of unknown function (DUF3049) ... 64 1e-10
AT5G22090.2 | Symbols: | Protein of unknown function (DUF3049) ... 52 6e-07
AT5G22090.1 | Symbols: | Protein of unknown function (DUF3049) ... 52 6e-07
>AT5G19260.1 | Symbols: | Protein of unknown function (DUF3049) |
chr5:6479494-6480360 REVERSE LENGTH=288
Length = 288
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 70/102 (68%), Gaps = 6/102 (5%)
Query: 116 LCTENLGNETGSDDVTDID----IDMLCFGTGEQSKKPRQVLETKK-VKPQNFPPPLTTM 170
LCTENLG+E+GSD VTDID +D+ GE + + R + K+ V P + PPPLTTM
Sbjct: 115 LCTENLGSESGSD-VTDIDELFSLDVQTKNLGETTTETRTLKSRKRSVSPSDLPPPLTTM 173
Query: 171 RGSESLRVRPHREGGRLVIEVTKVPLSASCFQAERSHGRLRL 212
RG + +++RPHRE GRLV+ T P CFQA+RS+GRLRL
Sbjct: 174 RGFQCIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRL 215
>AT4G02810.1 | Symbols: | Protein of unknown function (DUF3049) |
chr4:1256253-1257068 FORWARD LENGTH=271
Length = 271
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 93 KEPTYVHPQVKKXXXXXXXXXXELCTENLGNETGSDDVTDIDIDMLCFGTGEQSKKPRQV 152
K+ YV+P K+ E+CTE+LG E GSD + ++ +L SK PR
Sbjct: 46 KKTAYVYPIEKRSVAKLSL---EMCTESLGTENGSD--SGDEMSLLALEATNISKSPRLT 100
Query: 153 LETKK-----VKPQNFPPPLTTMRGSESLR-VRPHREGGRLVIEVTKVPLSASCFQAERS 206
+ +K + +FPPPL ++ G + R V+ ++E GRLV++ +V CF +ER
Sbjct: 101 TKPQKETSFMTRENSFPPPLNSVNGFNNSRMVKSYKEDGRLVVQAIRVCSPPRCFVSERR 160
Query: 207 HGRLRLCF 214
GRLRLC
Sbjct: 161 EGRLRLCL 168
>AT1G03170.1 | Symbols: | Protein of unknown function (DUF3049) |
chr1:769805-770527 FORWARD LENGTH=240
Length = 240
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 79 FSSIQSLSPVSQGPKEPTYVHPQVKKXXXXXXXXXXELCTENLGNETGSDDVTDIDIDML 138
S+ ++ ++Q ++ YVHP K+ E+CTE+LG ETGS+ + ++ +L
Sbjct: 26 LQSMSDITSIAQTKEDKAYVHPMEKRSVSKLNEKSLEMCTESLGTETGSE--SGDELSLL 83
Query: 139 CFGTGEQSKKPRQVLETK-------KVKP----QNFPPPLTTMRGSESLR-VRPHREGGR 186
F + P + L+ + K P +FPPP+ + S+ R VR E GR
Sbjct: 84 AFEATTTPRAPPRQLKPQEDTNLPDKTPPMSRNNSFPPPIKFVEDSKYNRMVRWLGEDGR 143
Query: 187 LVIEVTKVPLSASCFQAERSHGRLRLCF 214
+V++ +V SCF +ER GRLRL
Sbjct: 144 IVVQAIRVSSPPSCFVSERGEGRLRLIL 171
>AT3G06020.1 | Symbols: | Protein of unknown function (DUF3049) |
chr3:1813267-1814169 FORWARD LENGTH=300
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 84/199 (42%), Gaps = 24/199 (12%)
Query: 116 LCTENLGNETGSDDVTDIDIDMLCFGTGEQ----------SKKPRQVLETKKVKPQNFPP 165
LCTE+LG+ETGSD + + DM + Q S RQ + K+ + PP
Sbjct: 115 LCTESLGSETGSDIIHE---DMFSISSELQTMETRTTSTTSNPSRQ--DRKRNTMASLPP 169
Query: 166 PLTTMRGSESLRVRPHREGGRLVIEVTKVPLSASCFQAERSHGRLRLCFWXXXXXXXXXX 225
PLT+M G + + V+ HRE GRLV+ T+ P C Q +RS+G +RL
Sbjct: 170 PLTSMIGFDCIEVKSHRENGRLVMMATRPPPRNRCLQ-DRSNGCVRLAILIDSDDHIETE 228
Query: 226 XXXXXXXXLNGGKHXXXXXXXXXXXXXXXXXSWSIGGDIR-MEKYERSRGRCKEGDHENN 284
++ +EK +RSR RC EGD EN
Sbjct: 229 TKEEKEEEEEETIETVRDNEEEIPEYKEEEEEKEEEIKVKGVEKVQRSR-RCIEGDRENR 287
Query: 285 ELLVNWGEPLRVALALATS 303
L NW +L +ATS
Sbjct: 288 GFL-NWE-----SLCVATS 300
>AT5G22090.2 | Symbols: | Protein of unknown function (DUF3049) |
chr5:7315003-7316394 REVERSE LENGTH=463
Length = 463
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 35/151 (23%)
Query: 95 PTYVHPQVKKXXXXXXXXXXELCTENLGNETGSD--------DVTDIDIDM-----LCFG 141
P YVHP +K+ E+CTE+LG+ETG D + D +I++ L
Sbjct: 131 PPYVHPLMKRASSLSEKSL-EICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLVVN 189
Query: 142 TGEQSKKPRQVLETKKV----------------KPQNFPPPL--TTMRGSESLRVRPHRE 183
E K ++ ET+ V P +FPPP+ + + SL ++ R+
Sbjct: 190 VTE--TKVEEITETEIVVEQESSIIVPNHIIELPPGSFPPPIRSLSSQSGSSLHMKTRRD 247
Query: 184 GGRLVIEVTKVPLSASCFQAERSHGRLRLCF 214
GRLV+E +P S + F A+R GRL L F
Sbjct: 248 NGRLVLEAVSMP-SHNNFSAKRQDGRLLLTF 277
>AT5G22090.1 | Symbols: | Protein of unknown function (DUF3049) |
chr5:7315003-7316394 REVERSE LENGTH=463
Length = 463
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 35/151 (23%)
Query: 95 PTYVHPQVKKXXXXXXXXXXELCTENLGNETGSD--------DVTDIDIDM-----LCFG 141
P YVHP +K+ E+CTE+LG+ETG D + D +I++ L
Sbjct: 131 PPYVHPLMKRASSLSEKSL-EICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLVVN 189
Query: 142 TGEQSKKPRQVLETKKV----------------KPQNFPPPL--TTMRGSESLRVRPHRE 183
E K ++ ET+ V P +FPPP+ + + SL ++ R+
Sbjct: 190 VTE--TKVEEITETEIVVEQESSIIVPNHIIELPPGSFPPPIRSLSSQSGSSLHMKTRRD 247
Query: 184 GGRLVIEVTKVPLSASCFQAERSHGRLRLCF 214
GRLV+E +P S + F A+R GRL L F
Sbjct: 248 NGRLVLEAVSMP-SHNNFSAKRQDGRLLLTF 277