Miyakogusa Predicted Gene

Lj0g3v0362779.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0362779.1 Non Chatacterized Hit- tr|K4B203|K4B203_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,32.68,2e-18,ELO,GNS1/SUR4 membrane protein; FATTY ACID ACYL
TRANSFERASE-RELATED,GNS1/SUR4 membrane protein; seg,,CUFF.24985.1
         (205 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36830.1 | Symbols: HOS3-1 | GNS1/SUR4 membrane protein famil...   239   1e-63
AT1G75000.1 | Symbols:  | GNS1/SUR4 membrane protein family | ch...   232   1e-61
AT3G06470.1 | Symbols:  | GNS1/SUR4 membrane protein family | ch...    77   1e-14
AT3G06460.1 | Symbols:  | GNS1/SUR4 membrane protein family | ch...    75   4e-14

>AT4G36830.1 | Symbols: HOS3-1 | GNS1/SUR4 membrane protein family |
           chr4:17349511-17350380 FORWARD LENGTH=289
          Length = 289

 Score =  239 bits (610), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 117/175 (66%), Positives = 139/175 (79%), Gaps = 4/175 (2%)

Query: 1   MSLISAAIFTGTLASAAAEIRDTRWFWRRSKT--PFEWLLCFPLGTRPSGRVFFWSYLYY 58
           MS++SA IF G L SAAAEIRDTRW WRRSKT  P +WLLCFPLGTRPSGRVFFWSY++Y
Sbjct: 78  MSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQWLLCFPLGTRPSGRVFFWSYVFY 137

Query: 59  LSRFLHMARTVFCIXXXXXXSFSQLFNHSISTFVSFLWLEYSQSFQVLAILFTTLVYALV 118
           L+RFLHM RT+F +      + SQLF +S+  F SFLWLE+SQS+Q+LAIL TTLVY++V
Sbjct: 138 LTRFLHMFRTIFAVLRSRRLAVSQLFCNSVMAFTSFLWLEFSQSYQILAILSTTLVYSVV 197

Query: 119 YGYRFGTAIGFRGACFP-FVLNCQIVLLGCNVACHVGVFLLHFFFKGGCNGIGAW 172
           YGYRF T  G  G+ FP FV+NCQ+VL+GCN+  H GV  +H  FKGGCNGIGAW
Sbjct: 198 YGYRFWTGFGLPGSAFPSFVVNCQLVLVGCNLVSHAGVLTMH-LFKGGCNGIGAW 251


>AT1G75000.1 | Symbols:  | GNS1/SUR4 membrane protein family |
           chr1:28163650-28164586 FORWARD LENGTH=281
          Length = 281

 Score =  232 bits (592), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 115/173 (66%), Positives = 131/173 (75%), Gaps = 1/173 (0%)

Query: 1   MSLISAAIFTGTLASAAAEIRDTRWFWRRSKT-PFEWLLCFPLGTRPSGRVFFWSYLYYL 59
           +S+ISA IF G L SAAAEIRDTRW WRR++T   +W LCFP+GTR SGRVFFWSY +YL
Sbjct: 76  ISIISAVIFVGILLSAAAEIRDTRWLWRRTRTTALQWFLCFPVGTRASGRVFFWSYAFYL 135

Query: 60  SRFLHMARTVFCIXXXXXXSFSQLFNHSISTFVSFLWLEYSQSFQVLAILFTTLVYALVY 119
           SRFLH+ RT F +      SF QL N S    +SFLWLEYSQSFQV+AIL TT+ YA+VY
Sbjct: 136 SRFLHLFRTFFSVIRRRKLSFFQLINQSSLLCISFLWLEYSQSFQVVAILLTTVSYAVVY 195

Query: 120 GYRFGTAIGFRGACFPFVLNCQIVLLGCNVACHVGVFLLHFFFKGGCNGIGAW 172
           GYRF T IG RGACFPFV NCQ +LLGC   CHVGV  +H   +GGCNGIGAW
Sbjct: 196 GYRFWTEIGLRGACFPFVGNCQAILLGCMTVCHVGVLCIHLVKRGGCNGIGAW 248


>AT3G06470.1 | Symbols:  | GNS1/SUR4 membrane protein family |
           chr3:1984206-1985042 FORWARD LENGTH=278
          Length = 278

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 3/137 (2%)

Query: 38  LCFPLGTRPSGRVFFWSYLYYLSRFLHMARTVFCI--XXXXXXSFSQLFNHSISTFVSFL 95
           +CFP+  +P+G +FFW+ ++YLS+ L    T+  I        SF  +++H+    + +L
Sbjct: 108 ICFPVDVKPNGPLFFWAQVFYLSKILEFGDTILIILGKSIQRLSFLHVYHHATVVVMCYL 167

Query: 96  WLEYSQSFQVLAILFTTLVYALVYGYRFGTAIGFRGACFPFVLNCQIVLLGCNVACHVGV 155
           WL   QS   +A++  + V+ ++YGY F  A+G R      V +CQIV    +     G 
Sbjct: 168 WLRTRQSMFPIALVTNSTVHVIMYGYYFLCAVGSRPKWKRLVTDCQIVQFVFSFGLS-GW 226

Query: 156 FLLHFFFKGGCNGIGAW 172
            L    F  GC GI  W
Sbjct: 227 MLREHLFGSGCTGIWGW 243


>AT3G06460.1 | Symbols:  | GNS1/SUR4 membrane protein family |
           chr3:1982681-1983577 FORWARD LENGTH=298
          Length = 298

 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 38  LCFPLGTRPSGRVFFWSYLYYLSRFLHMARTVFCIXXXXXX--SFSQLFNHSISTFVSFL 95
           +CFPL  +P G +FFW+ ++YLS+ L    T+  I        SF  +++H+    + +L
Sbjct: 105 VCFPLDVKPKGPLFFWAQVFYLSKILEFVDTLLIILNKSIQRLSFLHVYHHATVVILCYL 164

Query: 96  WLEYSQSFQVLAILFTTLVYALVYGYRFGTAIGFRGACFPFVLNCQIVLLGCNVACHVGV 155
           WL   QS   + ++  + V+ ++YGY F  AIG R      V N Q+V     +      
Sbjct: 165 WLRTRQSMFPVGLVLNSTVHVIMYGYYFLCAIGSRPKWKKLVTNFQMVQFAFGMGLGAAW 224

Query: 156 FLLHFFFKGGCNGI 169
            L   +F  GC GI
Sbjct: 225 MLPEHYFGSGCAGI 238