Miyakogusa Predicted Gene

Lj0g3v0349259.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0349259.1 Non Chatacterized Hit- tr|I1M579|I1M579_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,60.26,0.00000000000009, ,CUFF.23986.1
         (61 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G43465.1 | Symbols:  | RNA-binding ASCH domain protein | chr2...    64   3e-11

>AT2G43465.1 | Symbols:  | RNA-binding ASCH domain protein |
           chr2:18047732-18049709 REVERSE LENGTH=388
          Length = 388

 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 48/96 (50%), Gaps = 35/96 (36%)

Query: 1   MLEAESLEKVLPGVESVEEGNKY-----------------------------------RG 25
           +L+AES EKV PG ++VEEG +                                     G
Sbjct: 186 LLKAESSEKVFPGTKTVEEGMQMFRKLYDTDQENFNGVVAIHLSKSVAQPCVALAHILSG 245

Query: 26  LKYEGVQGLLGIIHTTGTVPNALPPPRSSLLASFNL 61
           L Y GVQ LLG+ HTTG++ +ALPPPRS LL+SF L
Sbjct: 246 LSYTGVQNLLGLSHTTGSIFHALPPPRSMLLSSFML 281