Miyakogusa Predicted Gene

Lj0g3v0341769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341769.1 tr|G7KGI3|G7KGI3_MEDTR NBS resistance protein
OS=Medicago truncatula GN=MTR_5g031270 PE=4
SV=1,62.34,0.000000000000007,DUF707,Protein of unknown function
DUF707,CUFF.23417.1
         (75 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G18530.1 | Symbols:  | Protein of unknown function (DUF707) |...    58   1e-09
AT4G12840.1 | Symbols:  | Protein of unknown function (DUF707) |...    58   1e-09
AT4G12840.2 | Symbols:  | Protein of unknown function (DUF707) |...    56   6e-09

>AT4G18530.1 | Symbols:  | Protein of unknown function (DUF707) |
           chr4:10217749-10220285 FORWARD LENGTH=389
          Length = 389

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%)

Query: 16  NWPSGCETMPQGVGARASNLELRPLWD-SGINKRISKHPLNLLPTAVGVKKKEIINKIVS 74
           N P G E +PQG+  + SNLE + LW+     KR   H ++LL  AVG+K+KE++NK++ 
Sbjct: 69  NKPVGTEALPQGIIEKTSNLETQHLWNYDDTKKRRPNHSMSLLAMAVGIKQKELVNKVIQ 128

Query: 75  K 75
           K
Sbjct: 129 K 129


>AT4G12840.1 | Symbols:  | Protein of unknown function (DUF707) |
           chr4:7533621-7535832 REVERSE LENGTH=395
          Length = 395

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 3/58 (5%)

Query: 18  PSGCETMPQGVGARASNLELRPLWDSGINKRISKHPLNLLPTAVGVKKKEIINKIVSK 75
           P G ET+P+G+ A  S+LE+RPLW +   KR  K   +LL  AVG+++KE +NKIV K
Sbjct: 76  PPGSETLPRGIVASTSDLEMRPLWGA---KRDKKPKPSLLAMAVGIRQKESVNKIVKK 130


>AT4G12840.2 | Symbols:  | Protein of unknown function (DUF707) |
           chr4:7533621-7536263 REVERSE LENGTH=395
          Length = 395

 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 3/58 (5%)

Query: 18  PSGCETMPQGVGARASNLELRPLWDSGINKRISKHPLNLLPTAVGVKKKEIINKIVSK 75
           P G ET+P+G+ A  S+LE+RPLW +   KR  K   +LL  AVG+++KE +NKIV K
Sbjct: 76  PPGSETLPRGIVASTSDLEMRPLWGA---KRDKKPKPSLLAMAVGIRQKESVNKIVKK 130