Miyakogusa Predicted Gene

Lj0g3v0341479.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341479.1 tr|B7UCE1|B7UCE1_TYPLA Phytochelatin synthase
(Fragment) OS=Typha latifolia PE=4
SV=1,55.56,1e-17,Phytochelatin_C,Phytochelatin synthase, C-terminal;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;,CUFF.23387.1
         (244 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G03980.1 | Symbols: ATPCS2, PCS2 | phytochelatin synthase 2 |...   193   7e-50
AT5G44070.1 | Symbols: CAD1, ARA8, ATPCS1, PCS1 | phytochelatin ...   174   4e-44

>AT1G03980.1 | Symbols: ATPCS2, PCS2 | phytochelatin synthase 2 |
           chr1:1019311-1021871 REVERSE LENGTH=452
          Length = 452

 Score =  193 bits (491), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 109/254 (42%), Positives = 145/254 (57%), Gaps = 46/254 (18%)

Query: 1   MLISRPHREPDMLYTLSCKHESWSSIAKFLIDDVPSLLKSEDVKDICKVLSVIVTSLPSN 60
           MLISRPHREP +LYTLSCK ESW SIAK+L +DVP L+ S+ V  I ++L V+  SLP+N
Sbjct: 213 MLISRPHREPGLLYTLSCKDESWISIAKYLKEDVPRLVSSQHVDTIERILYVVFKSLPAN 272

Query: 61  FEEFIKWVAEIRRQEDGGPSLCEEEKTRAVVKEDVLKQVERTRLFKHVASF--------- 111
           F +FIKW+AEIRR ED   +L  EEK+R  +K+++LKQV+ T+LFKHV  F         
Sbjct: 273 FNQFIKWMAEIRRTEDVNQNLSSEEKSRLKLKQELLKQVQETKLFKHVDKFLSSVYEDNL 332

Query: 112 -----------------------CCRETCMKCGKADDDTPITKVCATVLNGNTESIRMHP 148
                                  CC+ETC+KC K   +  +T V              +P
Sbjct: 333 PYVAAKVYCDGDEILSGYESDESCCKETCVKCIKGLGEEKVTVVA-------------YP 379

Query: 149 AXXXXXXXXXXXXXXXXWAGITNEKLLREIHGLVSTENLPAALLQEEVLHLRRQLHILKR 208
           +                W+GI ++ LL+E+  L+S  + P  LLQ+EVLHLRRQL +LKR
Sbjct: 380 SGNDVFTALLLALPPQTWSGIKDQSLLQEMKQLISMVSHP-TLLQQEVLHLRRQLEMLKR 438

Query: 209 CQEGKVDGDLGVPS 222
           CQE K D +L  P+
Sbjct: 439 CQENKEDEELSAPA 452


>AT5G44070.1 | Symbols: CAD1, ARA8, ATPCS1, PCS1 | phytochelatin
           synthase 1 (PCS1) | chr5:17734876-17737672 FORWARD
           LENGTH=485
          Length = 485

 Score =  174 bits (441), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/272 (42%), Positives = 150/272 (55%), Gaps = 51/272 (18%)

Query: 1   MLISRPHREPDMLYTLSCKHESWSSIAKFLIDDVPSLLKSEDVKDICKVLSVIVTSLPSN 60
           MLISRPHREP +LYTLSCK ESW  IAK+L +DVP L+ S+ V  + K++SV+  SLPSN
Sbjct: 214 MLISRPHREPGLLYTLSCKDESWIEIAKYLKEDVPRLVSSQHVDSVEKIISVVFKSLPSN 273

Query: 61  FEEFIKWVAEIRRQEDGGPSLCEEEKTRAVVKEDVLKQVERTRLFKHV------------ 108
           F +FI+WVAEIR  ED   +L  EEK+R  +K+ VLK+V  T LFKH+            
Sbjct: 274 FNQFIRWVAEIRITEDSNQNLSAEEKSRLKLKQLVLKEVHETELFKHINKFLSTVGYEDS 333

Query: 109 ---------------------ASFCCRETCMKCGKADDDTPITKVCATVL-NGNTESIRM 146
                                  FCCRETC+KC K  DD+  T V   V+ +GN + + +
Sbjct: 334 LTYAAAKACCQGAEILSGSPSKEFCCRETCVKCIKGPDDSEGTVVTGVVVRDGNEQKVDL 393

Query: 147 ----------------HPAXXXXXXXXXXXXXXXXWAGITNEKLLREIHGLVSTENLPAA 190
                           +PA                W+GI ++ L+ E+  L+S  +LP  
Sbjct: 394 LVPSTQTECECGPEATYPAGNDVFTALLLALPPQTWSGIKDQALMHEMKQLISMASLP-T 452

Query: 191 LLQEEVLHLRRQLHILKRCQEGKVDGDLGVPS 222
           LLQEEVLHLRRQL +LKRCQE K + DL  P+
Sbjct: 453 LLQEEVLHLRRQLQLLKRCQENKEEDDLAAPA 484