Miyakogusa Predicted Gene

Lj0g3v0341049.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341049.3 tr|Q60DX1|Q60DX1_ORYSJ Os05g0367400 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0090H02.18
PE=2,55.84,3e-19,Thiamin pyrophosphokinase, catalytic domain,Thiamin
pyrophosphokinase, catalytic domain; TPK_catalyt,CUFF.23346.3
         (92 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44750.1 | Symbols: TPK2 | thiamin pyrophosphokinase 2 | chr2...   114   2e-26
AT2G44750.2 | Symbols: TPK2 | thiamin pyrophosphokinase 2 | chr2...   113   3e-26
AT1G02880.3 | Symbols: TPK1 | thiamin pyrophosphokinase1 | chr1:...   110   1e-25
AT1G02880.2 | Symbols: TPK1 | thiamin pyrophosphokinase1 | chr1:...   110   2e-25
AT1G02880.1 | Symbols: TPK1 | thiamin pyrophosphokinase1 | chr1:...    94   2e-20
AT1G02880.4 | Symbols: TPK1 | thiamin pyrophosphokinase1 | chr1:...    74   2e-14

>AT2G44750.1 | Symbols: TPK2 | thiamin pyrophosphokinase 2 |
           chr2:18451510-18452754 FORWARD LENGTH=265
          Length = 265

 Score =  114 bits (284), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 52/75 (69%), Positives = 62/75 (82%)

Query: 1   MPLFFPHEQPSHVRSRYKPDLIKGDMDSIRREVLDFYATLGTKIIDESQDQDTTDLHKCV 60
           +PLFFPHE P  +R+RYKPD+IKGDMDSIRR+VLDFY   GTK+IDES DQDTTDL KC+
Sbjct: 63  LPLFFPHEDPFVIRNRYKPDVIKGDMDSIRRDVLDFYVYWGTKVIDESHDQDTTDLDKCI 122

Query: 61  AYIRDSTPNVDKSSV 75
           +YIR ST N + S +
Sbjct: 123 SYIRHSTLNQESSRI 137


>AT2G44750.2 | Symbols: TPK2 | thiamin pyrophosphokinase 2 |
           chr2:18451510-18452754 FORWARD LENGTH=267
          Length = 267

 Score =  113 bits (282), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 62/77 (80%)

Query: 1   MPLFFPHEQPSHVRSRYKPDLIKGDMDSIRREVLDFYATLGTKIIDESQDQDTTDLHKCV 60
           +PLFFPHE P  +R+RYKPD+IKGDMDSIRR+VLDFY   GTK+IDES DQDTTDL KC+
Sbjct: 63  LPLFFPHEDPFVIRNRYKPDVIKGDMDSIRRDVLDFYVYWGTKVIDESHDQDTTDLDKCI 122

Query: 61  AYIRDSTPNVDKSSVSF 77
           +YIR ST N + S +  
Sbjct: 123 SYIRHSTLNQESSRLQI 139


>AT1G02880.3 | Symbols: TPK1 | thiamin pyrophosphokinase1 |
           chr1:643063-644485 REVERSE LENGTH=267
          Length = 267

 Score =  110 bits (276), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 51/77 (66%), Positives = 61/77 (79%)

Query: 1   MPLFFPHEQPSHVRSRYKPDLIKGDMDSIRREVLDFYATLGTKIIDESQDQDTTDLHKCV 60
           +PLFFP+E    +R+RYKPD+IKGDMDSIRR+VLDFY  LGTK+IDES DQDTTDL KC+
Sbjct: 63  LPLFFPNEDALAIRNRYKPDVIKGDMDSIRRDVLDFYINLGTKVIDESHDQDTTDLDKCI 122

Query: 61  AYIRDSTPNVDKSSVSF 77
            YIR ST N + S +  
Sbjct: 123 LYIRHSTLNQETSGLQI 139


>AT1G02880.2 | Symbols: TPK1 | thiamin pyrophosphokinase1 |
           chr1:643063-644476 REVERSE LENGTH=264
          Length = 264

 Score =  110 bits (276), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 51/77 (66%), Positives = 61/77 (79%)

Query: 1   MPLFFPHEQPSHVRSRYKPDLIKGDMDSIRREVLDFYATLGTKIIDESQDQDTTDLHKCV 60
           +PLFFP+E    +R+RYKPD+IKGDMDSIRR+VLDFY  LGTK+IDES DQDTTDL KC+
Sbjct: 60  LPLFFPNEDALAIRNRYKPDVIKGDMDSIRRDVLDFYINLGTKVIDESHDQDTTDLDKCI 119

Query: 61  AYIRDSTPNVDKSSVSF 77
            YIR ST N + S +  
Sbjct: 120 LYIRHSTLNQETSGLQI 136


>AT1G02880.1 | Symbols: TPK1 | thiamin pyrophosphokinase1 |
          chr1:643063-643972 REVERSE LENGTH=197
          Length = 197

 Score = 94.0 bits (232), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 44/62 (70%), Positives = 50/62 (80%)

Query: 16 RYKPDLIKGDMDSIRREVLDFYATLGTKIIDESQDQDTTDLHKCVAYIRDSTPNVDKSSV 75
          RYKPD+IKGDMDSIRR+VLDFY  LGTK+IDES DQDTTDL KC+ YIR ST N + S +
Sbjct: 8  RYKPDVIKGDMDSIRRDVLDFYINLGTKVIDESHDQDTTDLDKCILYIRHSTLNQETSGL 67

Query: 76 SF 77
            
Sbjct: 68 QI 69


>AT1G02880.4 | Symbols: TPK1 | thiamin pyrophosphokinase1 |
          chr1:643063-643921 REVERSE LENGTH=180
          Length = 180

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/52 (67%), Positives = 40/52 (76%)

Query: 26 MDSIRREVLDFYATLGTKIIDESQDQDTTDLHKCVAYIRDSTPNVDKSSVSF 77
          MDSIRR+VLDFY  LGTK+IDES DQDTTDL KC+ YIR ST N + S +  
Sbjct: 1  MDSIRRDVLDFYINLGTKVIDESHDQDTTDLDKCILYIRHSTLNQETSGLQI 52