Miyakogusa Predicted Gene
- Lj0g3v0336119.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0336119.1 Non Chatacterized Hit- tr|Q93X02|Q93X02_LOTJA
Putative ammonium transporter AMT2 OS=Lotus japonicus ,98.56,0,no
description,Ammonium transporter AmtB-like; seg,NULL;
Ammonium_transp,Ammonium transporter AmtB-l,CUFF.23001.1
(486 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38290.1 | Symbols: ATAMT2, AMT2;1, AMT2 | ammonium transport... 672 0.0
AT2G38290.2 | Symbols: ATAMT2, AMT2;1, AMT2 | ammonium transport... 497 e-141
AT3G24300.1 | Symbols: AMT1;3, ATAMT1;3 | ammonium transporter 1... 69 9e-12
AT1G64780.1 | Symbols: ATAMT1;2, AMT1;2 | ammonium transporter 1... 68 2e-11
AT4G13510.1 | Symbols: AMT1;1, ATAMT1, ATAMT1;1 | ammonium trans... 67 3e-11
AT3G24290.1 | Symbols: AMT1;5 | ammonium transporter 1;5 | chr3:... 67 4e-11
>AT2G38290.1 | Symbols: ATAMT2, AMT2;1, AMT2 | ammonium transporter
2 | chr2:16039672-16042291 REVERSE LENGTH=475
Length = 475
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/483 (69%), Positives = 382/483 (79%), Gaps = 13/483 (2%)
Query: 6 AYQENLPASPEWLNKGDNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAF 65
AY +LP PEWLNKGDNAWQ+TAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAF
Sbjct: 4 AYDPSLPEVPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAF 63
Query: 66 AAVLLCWVLLCYRMAFGDKLFPFWGKGAPALGQKFLINQASVPESTHYFNNGSIETQTQR 125
AAVLLCWVLLCY+MAFG++L PFWGKG PA Q +L QA +P S
Sbjct: 64 AAVLLCWVLLCYKMAFGEELLPFWGKGGPAFDQGYLKGQAKIPNS-----------NVAA 112
Query: 126 PFYPMATLVYFQFNFAAITMILLAGSGRDRMNIKAWMALIPLWLSFSYTVGAFSIWGGGF 185
P++PMATLVYFQF FAAIT IL+AGS RMNIKAWMA +PLWL FSYTVGA+SIWGGGF
Sbjct: 113 PYFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSIWGGGF 172
Query: 186 LYHWGVIDFSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVXXXXXXXXXXXXXX 245
LY WGVID+SGGYVIHLSSG+AGF AAYWVGPR K+DRERFPPNNV
Sbjct: 173 LYQWGVIDYSGGYVIHLSSGVAGFVAAYWVGPRPKADRERFPPNNVLLMLAGAGLLWMGW 232
Query: 246 SGFNGGAPYAANIDASIAVLNTNICAATSLLVWTSLDVAFFGKPSVIGAVQGMMTGLVCI 305
SGFNGGAPYAAN+ +SIAVLNTN+ AATSLLVWT+LDV FFGKPSVIGA+QGM+TGL +
Sbjct: 233 SGFNGGAPYAANLTSSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGV 292
Query: 306 TPGAGLVQSWAAIVMGILSGSIPWVSMMILHKKSSLLQKVDDTLGVFHTHAVAXXXXXXX 365
TPGAGL+Q+WAAI++G++SG+ PW SMMI+HKKS+LLQKVDDTL VF+THAVA
Sbjct: 293 TPGAGLIQTWAAIIIGVVSGTAPWASMMIIHKKSALLQKVDDTLAVFYTHAVAGLLGGIM 352
Query: 366 XXXXAEPELCRLVLPVSNSRGAFYGGTGGAQFLKQLVAALFVIGWNLVSTTLILLAIQLF 425
A P+LC LVLP+ +RGAFYGG GG Q LKQL A F+ WN+VSTT+ILLAI++F
Sbjct: 353 TGLFAHPDLCVLVLPLPATRGAFYGGNGGKQLLKQLAGAAFIAVWNVVSTTIILLAIRVF 412
Query: 426 IPLRMPDYQLEIGDDAVHGEEAYALWGDGEKYDPTKHGSTIVDETLAS--AYSVGARGVT 483
IPLRM + +L IGDDA HGEEAYALWGDGEK+D T+H + A+ +Y GARGVT
Sbjct: 413 IPLRMAEEELGIGDDAAHGEEAYALWGDGEKFDATRHVQQFERDQEAAHPSYVHGARGVT 472
Query: 484 VNL 486
+ L
Sbjct: 473 IVL 475
>AT2G38290.2 | Symbols: ATAMT2, AMT2;1, AMT2 | ammonium transporter
2 | chr2:16039672-16041864 REVERSE LENGTH=359
Length = 359
Score = 497 bits (1279), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/359 (68%), Positives = 286/359 (79%), Gaps = 2/359 (0%)
Query: 130 MATLVYFQFNFAAITMILLAGSGRDRMNIKAWMALIPLWLSFSYTVGAFSIWGGGFLYHW 189
MATLVYFQF FAAIT IL+AGS RMNIKAWMA +PLWL FSYTVGA+SIWGGGFLY W
Sbjct: 1 MATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSIWGGGFLYQW 60
Query: 190 GVIDFSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVXXXXXXXXXXXXXXSGFN 249
GVID+SGGYVIHLSSG+AGF AAYWVGPR K+DRERFPPNNV SGFN
Sbjct: 61 GVIDYSGGYVIHLSSGVAGFVAAYWVGPRPKADRERFPPNNVLLMLAGAGLLWMGWSGFN 120
Query: 250 GGAPYAANIDASIAVLNTNICAATSLLVWTSLDVAFFGKPSVIGAVQGMMTGLVCITPGA 309
GGAPYAAN+ +SIAVLNTN+ AATSLLVWT+LDV FFGKPSVIGA+QGM+TGL +TPGA
Sbjct: 121 GGAPYAANLTSSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGA 180
Query: 310 GLVQSWAAIVMGILSGSIPWVSMMILHKKSSLLQKVDDTLGVFHTHAVAXXXXXXXXXXX 369
GL+Q+WAAI++G++SG+ PW SMMI+HKKS+LLQKVDDTL VF+THAVA
Sbjct: 181 GLIQTWAAIIIGVVSGTAPWASMMIIHKKSALLQKVDDTLAVFYTHAVAGLLGGIMTGLF 240
Query: 370 AEPELCRLVLPVSNSRGAFYGGTGGAQFLKQLVAALFVIGWNLVSTTLILLAIQLFIPLR 429
A P+LC LVLP+ +RGAFYGG GG Q LKQL A F+ WN+VSTT+ILLAI++FIPLR
Sbjct: 241 AHPDLCVLVLPLPATRGAFYGGNGGKQLLKQLAGAAFIAVWNVVSTTIILLAIRVFIPLR 300
Query: 430 MPDYQLEIGDDAVHGEEAYALWGDGEKYDPTKHGSTIVDETLAS--AYSVGARGVTVNL 486
M + +L IGDDA HGEEAYALWGDGEK+D T+H + A+ +Y GARGVT+ L
Sbjct: 301 MAEEELGIGDDAAHGEEAYALWGDGEKFDATRHVQQFERDQEAAHPSYVHGARGVTIVL 359
>AT3G24300.1 | Symbols: AMT1;3, ATAMT1;3 | ammonium transporter 1;3
| chr3:8805858-8807354 REVERSE LENGTH=498
Length = 498
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 109/478 (22%), Positives = 169/478 (35%), Gaps = 71/478 (14%)
Query: 22 DNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYRMAF 81
DN + + +A LV + G +L A V+ K +N + AA L + L Y AF
Sbjct: 46 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAF 104
Query: 82 GDKLFPFWGKGAPALGQKFLINQASVPESTHYFNNGSIETQTQRPFYPMATLVYFQFNFA 141
G F G+ F + P + + F +Q+ FA
Sbjct: 105 GGSSEGFIGR------HNFALRDFPTPTADYSF-------------------FLYQWAFA 139
Query: 142 AITMILLAGSGRDRMNIKAWMALIPLWLSFSYTVGAFSIW-----------GGGFLYHWG 190
+ +GS +R A++ F Y V + W L+ G
Sbjct: 140 IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASPFRSADDRLFSTG 199
Query: 191 VIDFSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVXXXXXXXXXXXXXXS---- 246
IDF+G V+H+ GIAG A GPR R RF
Sbjct: 200 AIDFAGSGVVHMVGGIAGLWGALIEGPR----RGRFEKGGRAIALRGHSASLVVLGTFLL 255
Query: 247 -----GFNGGA------PYAANID------ASIAVLNTNICAATSLLVWTSLDVAFFGKP 289
GFN G+ PY + + +NT + T+ L G
Sbjct: 256 WFGWYGFNPGSFTKILVPYNSGSNYGQWSGIGRTAVNTTLSGCTAALTTLFGKRLLSGHW 315
Query: 290 SVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWVSMMILHKKSSLLQKVDDTL 349
+V G++ G IT G +V+ WAAIV G ++ + +I K + L + DD L
Sbjct: 316 NVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFMASVV-----LIGCNKLAELVQYDDPL 370
Query: 350 GVFHTHAVAXXXXXXXXXXXAEPELCRLVLPVSNSR--GAFYGGTGGAQFLKQLVAALFV 407
H A+ + V + R G F GG GG QLV L +
Sbjct: 371 EAAQLHGGCGAWGLIFVGLFAKEKYLNEVYGATPGRPYGLFMGG-GGKLLGAQLVQILVI 429
Query: 408 IGWNLVSTTLILLAIQLFIPLRMPD-YQLEIGDDAVHGEEAYALWGDGEKYDPTKHGS 464
+GW + + ++ LR+ + ++++ D HG AY + ++ GS
Sbjct: 430 VGWVSATMGTLFFILKRLNLLRISEQHEMQGMDMTRHGGFAYIYHDNDDESHRVDPGS 487
>AT1G64780.1 | Symbols: ATAMT1;2, AMT1;2 | ammonium transporter 1;2
| chr1:24061021-24062565 REVERSE LENGTH=514
Length = 514
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 169/485 (34%), Gaps = 70/485 (14%)
Query: 22 DNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYRMAF 81
DN + + +A LV + G +L A V+ K +N + AA + + L + AF
Sbjct: 52 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGAISYYLFGFAFAF 110
Query: 82 GDKLFPFWGKGAPALGQKFLINQASVPESTHYFNNGSIETQTQRPFYPMATLVYFQFNFA 141
G F G+ +S PE RP + +Y Q+ FA
Sbjct: 111 GTPSNGFIGR------HHSFFALSSYPE---------------RPGSDFSFFLY-QWAFA 148
Query: 142 AITMILLAGSGRDRMNIKAWMALIPLWLSFSYTVGAFSIWG-----------GGFLYHWG 190
+ +GS +R A++ F Y + W L+ G
Sbjct: 149 IAAAGITSGSIAERTQFVAYLIYSTFLTGFVYPTVSHWFWSSDGWASASRSDNNLLFGSG 208
Query: 191 VIDFSGGYVIHLSSGIAGFTAAYWVGPRL-KSDRE----RFPPNNVXXXXXXXXXXXXXX 245
IDF+G V+H+ GIAG A GPR+ + DR ++
Sbjct: 209 AIDFAGSGVVHMVGGIAGLCGALVEGPRIGRFDRSGRSVALRGHSASLVVLGTFLLWFGW 268
Query: 246 SGFNGGA------------PYAANIDA-SIAVLNTNICAATSLLVWTSLDVAFFGKPSVI 292
GFN G+ PY A + T + T+ L G +VI
Sbjct: 269 YGFNPGSFLTILKGYDKSRPYYGQWSAVGRTAVTTTLSGCTAALTTLFSKRLLAGHWNVI 328
Query: 293 GAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWVSMMILHKKSSLLQKVDDTLGVF 352
G++ G IT G +V+ WAAIV G ++ S + +L KK K DD L
Sbjct: 329 DVCNGLLGGFAAITSGCAVVEPWAAIVCGFVA-SWVLIGFNLLAKK----LKYDDPLEAA 383
Query: 353 HTHAVAXXXXXXXXXXXAEPELCRLVLPVSNSRGAFYGGTGGAQFLKQLVAALFVIGWNL 412
H A E + G F GG GG Q+V + ++GW
Sbjct: 384 QLHGGCGAWGLIFTGLFARKEYVNEIYSGDRPYGLFMGG-GGKLLAAQIVQIIVIVGWVT 442
Query: 413 VSTTLILLAIQLFIPLRMPDYQLEIGDDAV-HGEEAYAL----------WGD-GEKYDPT 460
V+ + + LR+ G D HG AYA WG + +PT
Sbjct: 443 VTMGPLFYGLHKMNLLRISAEDEMAGMDMTRHGGFAYAYNDEDDVSTKPWGHFAGRVEPT 502
Query: 461 KHGST 465
ST
Sbjct: 503 SRSST 507
>AT4G13510.1 | Symbols: AMT1;1, ATAMT1, ATAMT1;1 | ammonium
transporter 1;1 | chr4:7858220-7859725 FORWARD
LENGTH=501
Length = 501
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 165/477 (34%), Gaps = 75/477 (15%)
Query: 22 DNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYRMAF 81
DN + + +A LV G +L A V+ K +N + AA L + L Y AF
Sbjct: 42 DNTYLLFSAYLV-FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAF 100
Query: 82 GDKLFPFWGKGAPALGQKFLINQASVPESTHYFNNGSIETQTQRPFYPMATLVYFQFNFA 141
G F GK HYF I T + + +Y Q+ FA
Sbjct: 101 GSPSNGFIGK--------------------HYFGLKDIPTASA----DYSNFLY-QWAFA 135
Query: 142 AITMILLAGSGRDRMNIKAWMALIPLWLSFSYTVGAFSIWG-----------GGFLYHWG 190
+ +GS +R A++ F Y V + W G L+ G
Sbjct: 136 IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASPFRTDGDLLFSTG 195
Query: 191 VIDFSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVXXXXXXXXXXXXXXS---- 246
IDF+G V+H+ GIAG A GPRL RF
Sbjct: 196 AIDFAGSGVVHMVGGIAGLWGALIEGPRLG----RFDNGGRAIALRGHSASLVVLGTFLL 251
Query: 247 -----GFNGGAPYAANIDASIAVLNTNICAATSLLVWTSLD------VAFFGKP------ 289
GFN G+ + N A V T+L FGK
Sbjct: 252 WFGWYGFNPGSFNKILVTYETGTYNGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLSGHW 311
Query: 290 SVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWVSMMILHKKSSLLQKV--DD 347
+V G++ G IT G +V+ WAAI+ G +V+ ++L + L +K+ DD
Sbjct: 312 NVTDVCNGLLGGFAAITGGCSVVEPWAAIICG-------FVAALVLLGCNKLAEKLKYDD 364
Query: 348 TLGVFHTHAVAXXXXXXXXXXXAEPELCRLVLPVSNSR--GAFYGGTGGAQFLKQLVAAL 405
L H A+ + + R G F GG GG QL+ +
Sbjct: 365 PLEAAQLHGGCGAWGLIFTALFAQEKYLNQIYGNKPGRPHGLFMGG-GGKLLGAQLIQII 423
Query: 406 FVIGWNLVSTTLILLAIQLFIPLRMPDYQLEIGDDAV-HGEEAYALWGDGEKYDPTK 461
+ GW + + ++ LR+ G D HG AY + D E + +
Sbjct: 424 VITGWVSATMGTLFFILKKMKLLRISSEDEMAGMDMTRHGGFAYMYFDDDESHKAIQ 480
>AT3G24290.1 | Symbols: AMT1;5 | ammonium transporter 1;5 |
chr3:8801400-8802890 REVERSE LENGTH=496
Length = 496
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 165/461 (35%), Gaps = 70/461 (15%)
Query: 22 DNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYRMAF 81
DN + + +A LV + G +L A V+ K +N + AA L + L Y AF
Sbjct: 46 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAF 104
Query: 82 GDKLFPFWGKGAPALGQKFLINQASVPESTHYFNNGSIETQTQRPFYPMATLVYFQFNFA 141
G+ F G+ H F + T T + +Q+ FA
Sbjct: 105 GESSDGFIGR--------------------HNFGLQNFPTLTSD-----YSFFLYQWAFA 139
Query: 142 AITMILLAGSGRDRMNIKAWMALIPLWLSFSYTVGAFSIWG----------GGFLYHWGV 191
+ +GS +R A++ F Y V + W L+ G
Sbjct: 140 IAAAGITSGSIAERTKFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASPFRSEDRLFGTGA 199
Query: 192 IDFSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVXXXXXXXXXXXXXXS----- 246
IDF+G V+H+ GIAG A GPR+ RFP
Sbjct: 200 IDFAGSGVVHMVGGIAGLWGALIEGPRIG----RFPDGGHAIALRGHSASLVVLGTFLLW 255
Query: 247 ----GFNGGA------PYAANIDASIAVLNTNICAATSLLVWTSLDVAFFGKP------S 290
GFN G+ PY + + T+L T+ FGK +
Sbjct: 256 FGWYGFNPGSFTKILIPYNSGSNYGQWSGIGRTAVTTTLSGCTAALTTLFGKRLLSGHWN 315
Query: 291 VIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWVSMMILHKKSSLLQKVDDTLG 350
V G++ G IT G +V WAAIV G ++ + +I K + L K DD L
Sbjct: 316 VTDVCNGLLGGFAAITAGCSVVDPWAAIVCGFVASLV-----LIGCNKLAELLKYDDPLE 370
Query: 351 VFHTHAVAXXXXXXXXXXXAEPELCRLVLPVSNSR--GAFYGGTGGAQFLKQLVAALFVI 408
H A+ + V S R G F GG GG QLV + ++
Sbjct: 371 AAQLHGGCGAWGLIFVGLFAKEKYINEVYGASPGRHYGLFMGG-GGKLLGAQLVQIIVIV 429
Query: 409 GWNLVSTTLILLAIQLFIPLRMPD-YQLEIGDDAVHGEEAY 448
GW + + ++ LR+ + +++ D A HG AY
Sbjct: 430 GWVSATMGTLFFILKKLNLLRISEQHEMRGMDLAGHGGFAY 470