Miyakogusa Predicted Gene
- Lj0g3v0316209.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0316209.1 Non Chatacterized Hit- tr|A2ZSU8|A2ZSU8_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,24.7,2e-18,DUF1399,Protein of unknown function
DUF1399,CUFF.21367.1
(644 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G37900.1 | Symbols: | Protein of unknown function (duplicate... 587 e-167
AT2G22660.2 | Symbols: | Protein of unknown function (duplicate... 573 e-164
AT2G22660.1 | Symbols: | Protein of unknown function (duplicate... 499 e-141
AT1G56230.2 | Symbols: | Protein of unknown function (DUF1399) ... 102 6e-22
AT1G56230.1 | Symbols: | Protein of unknown function (DUF1399) ... 101 2e-21
AT4G37682.1 | Symbols: | Protein of unknown function (DUF1399) ... 53 7e-07
>AT4G37900.1 | Symbols: | Protein of unknown function (duplicated
DUF1399) | chr4:17821737-17824445 REVERSE LENGTH=787
Length = 787
Score = 587 bits (1512), Expect = e-167, Method: Compositional matrix adjust.
Identities = 302/593 (50%), Positives = 403/593 (67%), Gaps = 25/593 (4%)
Query: 45 LLAKDAESP-LTEDPLLVPLDCEWIWHCHRLNPVRYKNDCMELYGRILDNLNVVSSIQGT 103
LLA+ ES + + PL+ PLDCEW+WHCHRLNPVRYK DC + YGR+LDN VVSS+ G
Sbjct: 63 LLAQYTESSSICQGPLVPPLDCEWVWHCHRLNPVRYKTDCEQFYGRVLDNSGVVSSVNGN 122
Query: 104 SKKGTEKIWETMYPSEPYELDLTNDSVLDFGESLLGATENTTSYDLISAVKRQTTLFYQV 163
K TE +W+ +YP+EPY+LD N ++ + + + A E T+YDL+ AVKRQ+ FYQV
Sbjct: 123 CKSQTETLWKRLYPTEPYDLDFAN-AISEPAD--VSALEKCTTYDLVLAVKRQSPFFYQV 179
Query: 164 SRPYWNDDVFLEGAVARYKGFLHLIKRNIERSINCFCVPTYDIDLIWHSHQLHPASYCED 223
SR + ++DVFL+ AVARYK FL+LIK N ERSI FCVPTYDIDLIWH+HQLH SYC D
Sbjct: 180 SRAHVDNDVFLQEAVARYKAFLYLIKGNRERSIKLFCVPTYDIDLIWHTHQLHAISYCND 239
Query: 224 LVAIMGKVLEHDDTDSDRTKGQKLDVGFSETTTQWEETFGSRYWKAGAMHRGHPPSPLTV 283
L ++GKVLEHDDTDSDR+KG+KLD GFS TT QWEETFG RYWKAGAM+RG+ P P+T
Sbjct: 240 LTKMIGKVLEHDDTDSDRSKGKKLDTGFSGTTAQWEETFGRRYWKAGAMNRGNTPKPVTT 299
Query: 284 DKYKIDAMHNISASSNTNQNLIQQFPQKMLVEVMLEIVDVRDLPIENKGKLVVSFNKKQE 343
Y +I A +QN+I Q+P+ ++EV+LEIV V++LP +KGK+ V F+K Q
Sbjct: 300 SPYVCSGKKSI-AKEEESQNVI-QYPEVKVIEVILEIVGVKNLPDAHKGKVFVLFSKTQP 357
Query: 344 DIIFNAKKQLSISSVS-KRKQVAVFQCESSGELVFELIYHPSFNFGLVRPAKVLGKTSIN 402
D +FNA+++L++ S S KQVA+FQCE +GEL F+L+ S K LG TS++
Sbjct: 358 DSLFNAERRLTVLSESCGEKQVALFQCEPTGELSFQLMSSKS---------KSLGFTSLS 408
Query: 403 LEDMQNVASKLPTEMWLDLESTVKWS----KPISIRIGFSLTPPFPAPYVLHMISTSPFM 458
+ + +KL E WL+L T + PIS+R+ S TPP +P VLH++ P +
Sbjct: 409 FSEFLSPVTKLSVEKWLELTPTKRGKADDPNPISLRVAVSFTPPTRSPTVLHLVQARPSL 468
Query: 459 -GRYFSFMLPRKFRQVSNWTNIVDDAGNEVINIQTRNLASEKIRNQNINEEVIGRTASGE 517
G F ML RK R ++T +VD+ EVIN+Q RN S + +VIG GE
Sbjct: 469 KGSCFLPML-RKVRLAKSFTRVVDETETEVINLQMRN--SNDAAPKGDRRQVIGVKECGE 525
Query: 518 THLLAELKGTMWSIMNSGWMLQIKKTPDEDKHYFELTGTRKVIIFPGRKLEFETRYYGNV 577
T++LAE GT WS+++S W L+ P D FEL+GTR V ++ GRKLE+E ++ +
Sbjct: 526 TYVLAEYDGTFWSLLDSKWSLKQTCNPATDGPLFELSGTRMVKVYSGRKLEYEPKHCSKL 585
Query: 578 E-ESCFMTAVEFSQKDPYGKAVALMDLAYGFLEISEEWLVLPAIVSAFVLSNF 629
E FMTAVEFS++ PYGKAV L+DL +G +E +E+WLVLP +VS+F+LS+
Sbjct: 586 RSEQDFMTAVEFSKQHPYGKAVGLLDLKFGSIEANEKWLVLPGMVSSFILSDL 638
>AT2G22660.2 | Symbols: | Protein of unknown function (duplicated
DUF1399) | chr2:9627737-9630840 FORWARD LENGTH=819
Length = 819
Score = 573 bits (1478), Expect = e-164, Method: Compositional matrix adjust.
Identities = 296/573 (51%), Positives = 387/573 (67%), Gaps = 8/573 (1%)
Query: 59 LLVPLDCEWIWHCHRLNPVRYKNDCMELYGRILDNLNVVSSIQGTSKKGTEKIWETMYPS 118
L+ PLDCEWIWHCHRLNPVRY +DC + YGR+LDN V+SS+ G K TE +W+ +YP
Sbjct: 78 LVPPLDCEWIWHCHRLNPVRYNSDCEQFYGRVLDNSGVLSSVDGNCKLKTEDLWKRLYPD 137
Query: 119 EPYELDLTNDSVLDFGESLLGATENTTSYDLISAVKRQTTLFYQVSRPYWNDDVFLEGAV 178
EPYELDL N + D E A E T YDL+SAVKRQ+ +YQVSR + N D+FL+ AV
Sbjct: 138 EPYELDLDNIDLEDISEKS-SALEKCTKYDLVSAVKRQSPFYYQVSRSHVNSDIFLQEAV 196
Query: 179 ARYKGFLHLIKRNIERSINCFCVPTYDIDLIWHSHQLHPASYCEDLVAIMGKVLEHDDTD 238
ARYKGFL+LIK N ERS+ FCVPTYD+DLIWH+HQLHP SYC+D+V ++GKVLEHDDTD
Sbjct: 197 ARYKGFLYLIKMNRERSLKRFCVPTYDVDLIWHTHQLHPVSYCDDMVKLIGKVLEHDDTD 256
Query: 239 SDRTKGQKLDVGFSETTTQWEETFGSRYWKAGAMHRGHPPSPLTVDKYKIDAMHNISASS 298
SDR KG+KLD GFS+TT QWEETFG+RYWKAGAMHRG P P+T Y D + +
Sbjct: 257 SDRGKGKKLDTGFSKTTAQWEETFGTRYWKAGAMHRGKTPVPVTNSPYASDVLVKDPTAK 316
Query: 299 NTNQNLIQQFPQKMLVEVMLEIVDVRDLPIENKGKLVVSFNKKQEDIIFNAKKQLSISSV 358
+ QNLI QFP+ +VEV+LEI+ VR+LP +KGK+ V F+K Q D +FNA+++L+I S
Sbjct: 317 DDFQNLI-QFPEVEVVEVLLEIIGVRNLPDGHKGKVSVMFSKTQPDSLFNAERRLTILSE 375
Query: 359 SKRKQVAVFQCESSGELVFELIYHPSFNFGLVRPAKVLGKTSINLED-MQNVASKLPTEM 417
KQVA FQCE +GELVF+LI + R K LG S++L++ + V ++L E
Sbjct: 376 VGEKQVATFQCEPTGELVFKLISCSPSKIPVSREPKNLGFASLSLKEFLFPVITQLSVEK 435
Query: 418 WLDL---ESTVKWSKPISIRIGFSLTPPFPAPYVLHMISTSPFMGRYFSFMLPRKFRQVS 474
WL+L + + +KPIS+R+ S TPP +P VLHM+ + P F + K R
Sbjct: 436 WLELTPSKGSQTDTKPISLRVAVSFTPPVRSPSVLHMVQSRPSCKGSCFFPIIGKSRLAK 495
Query: 475 NWTNIVDDAGNEVINIQTRNLASEKIRNQNINEEVIGRTASGETHLLAELKGTMWSIMNS 534
+ T+IVD+ EVI +Q RN A I + +V+G T SGET +LA G+ WS+++S
Sbjct: 496 SSTHIVDETQTEVITLQIRNSADGGILKDD-QRQVMGVTDSGETRVLAVYTGSFWSLLDS 554
Query: 535 GWMLQIKKTPDEDKHYFELTGTRKVIIFPGRKLEFETRYYGNVEESC-FMTAVEFSQKDP 593
W L+ D FE+ G R V IF GRKL++E ++ N+ FMT VEFS++ P
Sbjct: 555 KWSLKQINASTADNPLFEILGPRVVKIFSGRKLDYEPKHCANLRSDLDFMTLVEFSKQHP 614
Query: 594 YGKAVALMDLAYGFLEISEEWLVLPAIVSAFVL 626
YGK V L+D+ +G +E E WL+LP IVSAF+L
Sbjct: 615 YGKTVGLVDMRFGSIEAKENWLLLPGIVSAFIL 647
>AT2G22660.1 | Symbols: | Protein of unknown function (duplicated
DUF1399) | chr2:9627737-9629957 FORWARD LENGTH=586
Length = 586
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 261/505 (51%), Positives = 339/505 (67%), Gaps = 7/505 (1%)
Query: 59 LLVPLDCEWIWHCHRLNPVRYKNDCMELYGRILDNLNVVSSIQGTSKKGTEKIWETMYPS 118
L+ PLDCEWIWHCHRLNPVRY +DC + YGR+LDN V+SS+ G K TE +W+ +YP
Sbjct: 78 LVPPLDCEWIWHCHRLNPVRYNSDCEQFYGRVLDNSGVLSSVDGNCKLKTEDLWKRLYPD 137
Query: 119 EPYELDLTNDSVLDFGESLLGATENTTSYDLISAVKRQTTLFYQVSRPYWNDDVFLEGAV 178
EPYELDL N + D E A E T YDL+SAVKRQ+ +YQVSR + N D+FL+ AV
Sbjct: 138 EPYELDLDNIDLEDISEKS-SALEKCTKYDLVSAVKRQSPFYYQVSRSHVNSDIFLQEAV 196
Query: 179 ARYKGFLHLIKRNIERSINCFCVPTYDIDLIWHSHQLHPASYCEDLVAIMGKVLEHDDTD 238
ARYKGFL+LIK N ERS+ FCVPTYD+DLIWH+HQLHP SYC+D+V ++GKVLEHDDTD
Sbjct: 197 ARYKGFLYLIKMNRERSLKRFCVPTYDVDLIWHTHQLHPVSYCDDMVKLIGKVLEHDDTD 256
Query: 239 SDRTKGQKLDVGFSETTTQWEETFGSRYWKAGAMHRGHPPSPLTVDKYKIDAMHNISASS 298
SDR KG+KLD GFS+TT QWEETFG+RYWKAGAMHRG P P+T Y D + +
Sbjct: 257 SDRGKGKKLDTGFSKTTAQWEETFGTRYWKAGAMHRGKTPVPVTNSPYASDVLVKDPTAK 316
Query: 299 NTNQNLIQQFPQKMLVEVMLEIVDVRDLPIENKGKLVVSFNKKQEDIIFNAKKQLSISSV 358
+ QNLI QFP+ +VEV+LEI+ VR+LP +KGK+ V F+K Q D +FNA+++L+I S
Sbjct: 317 DDFQNLI-QFPEVEVVEVLLEIIGVRNLPDGHKGKVSVMFSKTQPDSLFNAERRLTILSE 375
Query: 359 SKRKQVAVFQCESSGELVFELIYHPSFNFGLVRPAKVLGKTSINLED-MQNVASKLPTEM 417
KQVA FQCE +GELVF+LI + R K LG S++L++ + V ++L E
Sbjct: 376 VGEKQVATFQCEPTGELVFKLISCSPSKIPVSREPKNLGFASLSLKEFLFPVITQLSVEK 435
Query: 418 WLDL---ESTVKWSKPISIRIGFSLTPPFPAPYVLHMISTSPFMGRYFSFMLPRKFRQVS 474
WL+L + + +KPIS+R+ S TPP +P VLHM+ + P F + K R
Sbjct: 436 WLELTPSKGSQTDTKPISLRVAVSFTPPVRSPSVLHMVQSRPSCKGSCFFPIIGKSRLAK 495
Query: 475 NWTNIVDDAGNEVINIQTRNLASEKIRNQNINEEVIGRTASGETHLLAELKGTMWSIMNS 534
+ T+IVD+ EVI +Q RN A I + +V+G T SGET +LA G+ WS+++S
Sbjct: 496 SSTHIVDETQTEVITLQIRNSADGGILKDD-QRQVMGVTDSGETRVLAVYTGSFWSLLDS 554
Query: 535 GWMLQIKKTPDEDKHYFELTGTRKV 559
W L+ D FE+ G R V
Sbjct: 555 KWSLKQINASTADNPLFEILGPRVV 579
>AT1G56230.2 | Symbols: | Protein of unknown function (DUF1399) |
chr1:21046111-21048959 REVERSE LENGTH=742
Length = 742
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 159/615 (25%), Positives = 257/615 (41%), Gaps = 94/615 (15%)
Query: 59 LLVPLDCEWIWHCHRLNPVRYKNDCMELYGRILDNLNVVSSI-QGTSKKGTEKIWETMYP 117
+L PLD EW+W CH LNPV Y + C + +++ + + + EKIW YP
Sbjct: 85 ILPPLDVEWVWFCHCLNPVSYSDYCERRFSKLIGKPAIYDEENEDYAVLQCEKIWSLRYP 144
Query: 118 SEPYELDLTNDSVLDFGESLLGATENTTSYDLISAVKRQTTLFYQVSRPYWNDDVFLEGA 177
E +E DS+ T + + D+ S VK+Q L+ + S PY ++ V+L A
Sbjct: 145 LESFENRADPDSL---------ETVSLVNEDIKSLVKKQMFLWEKFSAPYMSETVYLIAA 195
Query: 178 VARYKGFLHLIKRNIERSINCFCVPTYDIDLIWHSHQLHPASYCEDLVAIMGKVLEHDDT 237
RYKGFL LI + ++ +P DI L+W +HQ +P Y +D+ ++ ++ T
Sbjct: 196 RLRYKGFL-LILHKFKDEVSSL-IPASDILLMWLTHQSYPTVYKDDVDEMLEEM-----T 248
Query: 238 DSDRTKGQKLDVGFSETTTQ-WEETFGSRYWKAGA----MHRGHPPSPLTVDKYKIDAMH 292
G+K++ ETT + W+ F Y KAG + S T+ + + M
Sbjct: 249 RKVVQVGEKVEKTEVETTKELWDRYFNQPYEKAGGELSIIANESGLSNNTMFYWPVSDMD 308
Query: 293 NISASSNTNQNLIQQFPQKMLVEVMLEIVDVRDLPIENKGKLVVSFNKKQEDIIFNAKKQ 352
+A + + + Q E +D L + ++ K Q D KK
Sbjct: 309 VNTAYKSIRPRFVLEAEQN-------ESIDRSFLRL----RVARCHRKLQLD-----KKM 352
Query: 353 LSISSVSKRKQVAVFQCESSGELVFELIYHPSFNFGLV-RPAKVLGKTSINLEDMQNVAS 411
+SS + ++ CE G L F L H + G+ + K G D+ S
Sbjct: 353 TDLSSEASWQKAWHLYCE-FGTLGFILESHCDRSRGICFKSGKPEGMIEFPWNDLLRAHS 411
Query: 412 KLPTEMWLDLESTVKWSKPISIRIGFSLTPPFPAPYVLHMI--STSPFMGRYFSFMLPR- 468
L S K +S+ S+TPP APY+L + + G S + R
Sbjct: 412 ---------LASGRFLGKQVSVFA--SVTPPVQAPYLLRFVPDRVTDDSGAMISDSVQRT 460
Query: 469 -KFR-QVSNW--TNIVDDAGNEVINIQTR----------NLASEKIRNQNINEEVIGRTA 514
FR Q W ++D AG E I+ R + S + I E +G +
Sbjct: 461 NNFRPQEGRWLTRTVLDHAGRECFVIRIRVGKGVFKRGGEVPSPVKSEERITEVRVGSWS 520
Query: 515 SGETHL---LAELKGTM--------WSI---MNSGWMLQIK----KTPDEDKHYFELTGT 556
E + A++ GT+ W ++G L I+ T E + Y G+
Sbjct: 521 YVEGSIGKAPAKVVGTVTPKEPMEDWEAAWEFSTGDELCIRWDSLGTISELRLYSRNPGS 580
Query: 557 RKVIIFPGRKLEFETRYYGNVEES--CFMTAVEFSQKDPYGKAVALMDLAYGFLE-ISEE 613
V + GR+++ Y G EE F+T V +++DP KA AL+D + +E + EE
Sbjct: 581 -LVRLLTGRRMQ----YKGEDEEDDEGFVTVVRSTEEDPTEKATALIDWKHQAVEFLPEE 635
Query: 614 WLVLPAIVSAFVLSN 628
V ++S +L +
Sbjct: 636 DAVFVLLLSVSILRS 650
>AT1G56230.1 | Symbols: | Protein of unknown function (DUF1399) |
chr1:21046111-21048959 REVERSE LENGTH=752
Length = 752
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 155/621 (24%), Positives = 261/621 (42%), Gaps = 96/621 (15%)
Query: 59 LLVPLDCEWIWHCHRLNPVRYKNDCMELYGRILDNLNVVSSI-QGTSKKGTEKIWETMYP 117
+L PLD EW+W CH LNPV Y + C + +++ + + + EKIW YP
Sbjct: 85 ILPPLDVEWVWFCHCLNPVSYSDYCERRFSKLIGKPAIYDEENEDYAVLQCEKIWSLRYP 144
Query: 118 SEPYELDLTNDSVLDFGESLLGATENTTSYDLISAVKRQTTLFYQVSRPYWNDDVFLEGA 177
E +E DS+ T + + D+ S VK+Q L+ + S PY ++ V+L A
Sbjct: 145 LESFENRADPDSL---------ETVSLVNEDIKSLVKKQMFLWEKFSAPYMSETVYLIAA 195
Query: 178 VARYKGFLHLIKRNIERSINCFCVPTYDIDLIWHSHQLHPASYCEDLVAIMGKVLEHDDT 237
RYKGFL LI + ++ +P DI L+W +HQ +P Y +D+ ++ ++ T
Sbjct: 196 RLRYKGFL-LILHKFKDEVSSL-IPASDILLMWLTHQSYPTVYKDDVDEMLEEM-----T 248
Query: 238 DSDRTKGQKLDVGFSETTTQ-WEETFGSRYWKAGAMHRGHPPSPLTVDKYKIDAMHNISA 296
G+K++ ETT + W+ F Y KAG + I+
Sbjct: 249 RKVVQVGEKVEKTEVETTKELWDRYFNQPYEKAGG------------------ELSIIAN 290
Query: 297 SSNTNQNLIQQFP-QKMLVEVMLEIVDVRDLPIENKGKLVVSFNKKQEDIIFNAKKQLSI 355
S + N + +P M V + + R +E L ++ +Q + I + +L +
Sbjct: 291 ESGLSNNTMFYWPVSDMDVNTAYKSIRPR-FVLELCIFLRLNPKAEQNESIDRSFLRLRV 349
Query: 356 SSVSKRKQVAVFQCESSGELVFELIYHPSFNFGLVRPAKVLGKTSINLEDMQNVASKLPT 415
+ ++ Q+ + S E ++ +H FG + + ++ + S P
Sbjct: 350 ARCHRKLQLDKKMTDLSSEASWQKAWHLYCEFGTL---GFILESHCDRSRGICFKSGKPE 406
Query: 416 EM----WLD------LESTVKWSKPISIRIGFSLTPPFPAPYVLHMI--STSPFMGRYFS 463
M W D L S K +S+ S+TPP APY+L + + G S
Sbjct: 407 GMIEFPWNDLLRAHSLASGRFLGKQVSVFA--SVTPPVQAPYLLRFVPDRVTDDSGAMIS 464
Query: 464 FMLPR--KFR-QVSNW--TNIVDDAGNEVINIQTR----------NLASEKIRNQNINEE 508
+ R FR Q W ++D AG E I+ R + S + I E
Sbjct: 465 DSVQRTNNFRPQEGRWLTRTVLDHAGRECFVIRIRVGKGVFKRGGEVPSPVKSEERITEV 524
Query: 509 VIGRTASGETHL---LAELKGTM--------WSI---MNSGWMLQIK----KTPDEDKHY 550
+G + E + A++ GT+ W ++G L I+ T E + Y
Sbjct: 525 RVGSWSYVEGSIGKAPAKVVGTVTPKEPMEDWEAAWEFSTGDELCIRWDSLGTISELRLY 584
Query: 551 FELTGTRKVIIFPGRKLEFETRYYGNVEES--CFMTAVEFSQKDPYGKAVALMDLAYGFL 608
G+ V + GR+++ Y G EE F+T V +++DP KA AL+D + +
Sbjct: 585 SRNPGS-LVRLLTGRRMQ----YKGEDEEDDEGFVTVVRSTEEDPTEKATALIDWKHQAV 639
Query: 609 E-ISEEWLVLPAIVSAFVLSN 628
E + EE V ++S +L +
Sbjct: 640 EFLPEEDAVFVLLLSVSILRS 660
>AT4G37682.1 | Symbols: | Protein of unknown function (DUF1399) |
chr4:17703461-17703844 FORWARD LENGTH=75
Length = 75
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 141 TENTTSYDLISAVKRQTTLFYQVSRPYW-NDDVFLEGAVARYKGFLHLIKRNIERSINCF 199
+ T S +SAVKRQ +YQVSR + NDDVFL+ A+ARYK FL ++ +I + F
Sbjct: 12 SAQTRSITRLSAVKRQGPFYYQVSRAHVDNDDVFLQEALARYKAFLIILVFSIREEVVVF 71
Query: 200 CV 201
V
Sbjct: 72 VV 73