Miyakogusa Predicted Gene
- Lj0g3v0315799.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0315799.1 Non Chatacterized Hit- tr|C5XG27|C5XG27_SORBI
Putative uncharacterized protein Sb03g030790
OS=Sorghu,20.94,2e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; TPR-like,NULL; HCP-like,NULL;
SUBFAMI,CUFF.21335.1
(506 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 437 e-123
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 3e-56
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 8e-53
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 9e-53
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 3e-52
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 4e-52
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 200 2e-51
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 6e-51
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 198 8e-51
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 2e-50
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 4e-49
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 5e-49
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 192 7e-49
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 7e-49
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 7e-48
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 7e-48
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 187 1e-47
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 2e-47
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 4e-47
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 2e-46
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 2e-46
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 183 2e-46
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 2e-46
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 8e-46
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 9e-46
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 181 1e-45
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 2e-45
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 3e-45
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 6e-45
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 8e-45
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 4e-44
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 173 2e-43
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 4e-43
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 172 5e-43
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 7e-43
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 7e-43
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 8e-43
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 170 3e-42
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 169 3e-42
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 5e-41
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 5e-41
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 1e-40
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 163 2e-40
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 163 3e-40
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 3e-39
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 5e-39
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 6e-39
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 7e-39
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 1e-38
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 2e-37
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 2e-37
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 7e-37
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 152 7e-37
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 8e-37
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 1e-36
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 149 6e-36
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 4e-35
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 145 6e-35
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 145 7e-35
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 7e-35
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 9e-35
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 6e-33
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 8e-33
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 138 8e-33
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 1e-32
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 131 1e-30
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 7e-30
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 1e-29
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 127 2e-29
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 5e-29
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 5e-28
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 5e-27
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 119 5e-27
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 118 9e-27
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 4e-26
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 1e-25
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 113 2e-25
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 113 4e-25
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 112 5e-25
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 107 3e-23
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 104 1e-22
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 104 2e-22
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 98 1e-20
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 98 1e-20
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 97 2e-20
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 97 2e-20
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 97 3e-20
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 94 2e-19
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 4e-19
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 93 5e-19
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 93 5e-19
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 93 5e-19
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 8e-19
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 92 8e-19
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 91 2e-18
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 91 2e-18
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 89 6e-18
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 89 6e-18
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 89 9e-18
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 82 9e-16
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 82 1e-15
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 82 1e-15
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 81 2e-15
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 80 3e-15
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 79 8e-15
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 79 8e-15
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 78 1e-14
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 78 1e-14
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 77 2e-14
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 75 9e-14
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 75 1e-13
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 75 1e-13
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 74 3e-13
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 73 4e-13
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 73 5e-13
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 1e-12
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 70 3e-12
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 69 9e-12
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 69 9e-12
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 67 3e-11
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 65 1e-10
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 65 1e-10
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 65 2e-10
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 64 2e-10
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 64 3e-10
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 62 1e-09
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 61 1e-09
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 61 2e-09
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 6e-09
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 57 4e-08
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 49 8e-06
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 49 8e-06
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 49 8e-06
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/458 (44%), Positives = 309/458 (67%), Gaps = 2/458 (0%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
R ++K +STK LNI + S+CK + L++AE +LIDG++LGVLPDV+T+NTLI Y RF+
Sbjct: 3 RGLMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFI 62
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
D V RM+EAG+ PDV +YNSL+SGA + + L +FD+M+ S + PD+WSYN
Sbjct: 63 GIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYN 122
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
LM CYF+LG EA ++ + + A P TYN++++ LCK+G+ NA+ +F++L+
Sbjct: 123 TLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS 182
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQ 285
R PE++TYN LINGLCK+RR ++ E +++G+ PNA+T+TT++ F+ R+E+
Sbjct: 183 R-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEK 241
Query: 286 GLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP-DLASYNTMI 344
GL++ +M+ +GYTFDGFA C VV+AL+KTGR EA E +++ +G D+ SYNT++
Sbjct: 242 GLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLL 301
Query: 345 YLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFG 404
LYF+ G +D +L+++IE +G D YTHTII++GL A +HL + +G
Sbjct: 302 NLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQ 361
Query: 405 FNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVAC 464
++V NC++DGL KAGH+DRA++ F MEVRD FTYT +VHNLC+ R +CASK L++C
Sbjct: 362 PSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSC 421
Query: 465 LQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKA 502
G ++ + RRAV+ G+ A+K +KI+ A
Sbjct: 422 YNKGMKIPSSARRAVLSGIRETVSYQAARKTHIKIKAA 459
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 192/421 (45%), Gaps = 13/421 (3%)
Query: 2 NLSAAPALHFNAAYPFTHPAILNHENPI---TSFLTQRITHSKNVTFRIMVKGRSLSTKF 58
NL A L + P ++ + I T F+ I + VT R+ G
Sbjct: 28 NLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIG--IDEAYAVTRRMREAGIEPDVTT 85
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVL-ERM 117
N I+ K L++ + + + G+ PD+ ++NTL+ Y + ++L E +
Sbjct: 86 YNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDI 145
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
AGL P + +YN L+ + G + +F K ++S ++P++ +YNIL++ +
Sbjct: 146 HLAGLVPGIDTYNILLDALCKSGHTDNAIELF-KHLKSRVKPELMTYNILINGLCKSRRV 204
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
+ + +++ S T P+ TY M+ K + L +F +++ G+ + A
Sbjct: 205 GSVDWMMRELKKSGYT-PNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCA 263
Query: 238 LINGLCKARRANEARRLLSEFREAG-HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
+++ L K RA EA + E +G + +++ T++N F+ G L+ ++L E+ K
Sbjct: 264 VVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMK 323
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA 356
G D + + +V L+ G A++ + G++P + + N +I + G VD A
Sbjct: 324 GLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRA 383
Query: 357 LELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDG 416
+ L +E D++T+T ++H LCK RL A + L + G A VL G
Sbjct: 384 MRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSG 439
Query: 417 L 417
+
Sbjct: 440 I 440
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 228/434 (52%), Gaps = 8/434 (1%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I C+ + KA +L G +PDV+T+N +I YC+ + VL+RM +
Sbjct: 144 IRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---V 200
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
+PDV++YN+++ G + + D+M++ + PDV +Y IL+ R A +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK 260
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+ D + P TYNV++NG+CK G + A+ ++ G P V+T+N ++ +
Sbjct: 261 LL-DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
C R +A +LL++ G P+ +TF ++N R G L + ++IL +M G +
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
+Y ++ K ++ A E E+M+S G PD+ +YNTM+ + G+V++A+E+++Q
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
+ +G T+ +I GL KA + +A++ LD M + + + + ++ GL + G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 423 IDRALKFF---EGMEVR-DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRA 478
+D A+KFF E M +R ++ T+ ++ LC++R+ A LV + G + + +
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 479 VIDGLISDGLKNEA 492
+I+GL +G+ EA
Sbjct: 560 LIEGLAYEGMAKEA 573
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 209/389 (53%), Gaps = 8/389 (2%)
Query: 66 MCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPD 125
M + +L++ L + V G +PD++ TLI +CR ++LE ++ +G PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 126 VISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFK 185
VI+YN ++SG + G L + D+M + PDV +YN ++ G +A V
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVL- 227
Query: 186 DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKA 245
D +L + P TY ++I C++ V +A+ + ++ RG P+V+TYN L+NG+CK
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 246 RRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAY 305
R +EA + L++ +G +PN IT ++ GR ++L +M KG++ +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 306 CTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEK 365
++ L + G + A +I E+M +G +P+ SYN +++ + ++ ++D A+E ++++
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 366 EGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDR 425
G D T+ ++ LCK ++ +AV+ L+ ++S G L+ N V+DGL KAG +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 426 ALKFFEGMEVR----DSFTYTILVHNLCR 450
A+K + M + D+ TY+ LV L R
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 212/393 (53%), Gaps = 8/393 (2%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N+ I+ CKA +++ A VL ++ V PDVVT+NT++ + C EVL+RM +
Sbjct: 176 NVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
PDVI+Y L+ R + + D+M + PDV +YN+L++ + G DE
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + D + S+ P+ T+N+++ +C G +A + ++ R+GF P V+T+N LI
Sbjct: 293 AIKFLND-MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
N LC+ A +L + + G +PN++++ +++ + ++++ +E L M S+G
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D Y T++ AL K G+V +A EI Q+ S G P L +YNT+I + G+ +A++L
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+D++ + D T++ ++ GL + +++EA++ +G N V N ++ GL K
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 420 AGHIDRALKFFEGMEVR----DSFTYTILVHNL 448
+ DRA+ F M R + +YTIL+ L
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 201/371 (54%), Gaps = 1/371 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + S+C + +L +A VL ++ PDV+T+ LI+A CR ++L+ M++
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G TPDV++YN L++G ++G + + M S +P+V ++NI++ G +
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A ++ D+L + PS T+N++IN LC+ G + A+ + + + G P L+YN L+
Sbjct: 328 AEKLLADMLRKGFS-PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+G CK ++ + A L G P+ +T+ T++ + G++E +EIL ++ SKG +
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
Y TV+ L K G+ +A ++ ++M + ++PD +Y++++ R+G+VDEA++
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+ E+ G + T I+ GLCK+++ + A+ L M + G N + +++GL
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Query: 420 AGHIDRALKFF 430
G AL+
Sbjct: 567 EGMAKEALELL 577
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 163/308 (52%), Gaps = 1/308 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N+ + +CK +LD+A L D G P+V+T N ++ + C + ++L M
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G +P V+++N L++ RKGL + + +KM + +P+ SYN L+H + + D
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + + ++S P TYN M+ LCK+G V +A+ + L +G P ++TYN +I
Sbjct: 398 AIE-YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+GL KA + +A +LL E R +P+ IT+++++ R G++++ ++ E G
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ + +++ L K+ + A + M++ G +P+ SY +I +G EALEL
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Query: 360 VDQIEKEG 367
++++ +G
Sbjct: 577 LNELCNKG 584
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 139/274 (50%), Gaps = 1/274 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI + SMC + AE +L D ++ G P VVTFN LI+ CR ++LE+M +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G P+ +SYN L+ G ++ + ++M+ PD+ +YN ++ + G ++
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + L S P TYN +I+GL K G A+ + ++ + P+ +TY++L+
Sbjct: 433 AVEILNQ-LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
GL + + +EA + EF G PNA+TF ++M + + ++ ++ L M ++G
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
+ +Y ++ L G EA E+ ++ + G+
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 159/340 (46%), Gaps = 9/340 (2%)
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
DV S N L R G +E + ++++ P +I G C+ G A +
Sbjct: 102 DVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKI 159
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
L+ G VP+V+TYN +I+G CKA N A LS P+ +T+ T++
Sbjct: 160 LEILEGSGAVPDVITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCD 216
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
G+L+Q +E+L M + D Y ++ A + V A ++ ++M G PD+ +
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
YN ++ ++GR+DEA++ ++ + G + TH II+ +C R +A + L M
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFL 455
GF ++V N +++ L + G + RA+ E M +S +Y L+H C+ ++
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 456 CASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
A ++L + G T ++ L DG +A ++
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 140/280 (50%), Gaps = 2/280 (0%)
Query: 19 HPAILNHENPITSFL-TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAEC 77
P ++ H + S T R ++ + ++ KG S S NI I +C+ L +A
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
+L + G P+ +++N L+ +C+ D E LERM G PD+++YN++++
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
+ G + + +++ P + +YN ++ + G +A ++ D + + + P T
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL-DEMRAKDLKPDT 484
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
TY+ ++ GL + G V A+ F +R G P +T+N+++ GLCK+R+ + A L
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 258 FREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
G +PN ++T ++ G ++ LE+L E+ +KG
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 221/437 (50%), Gaps = 5/437 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
+I I C+ QL A VL +KLG PD+VT N+L++ +C ++ +M E
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G PD ++N+L+ G R + + D+M+ +PD+ +Y I+++ + G D
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + K + + +P YN +I+ LC V++AL++F + +G P V+TYN+LI
Sbjct: 240 ALSLLKK-MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
LC R ++A RLLS+ E PN +TF+ +++ + G+L + ++ EM +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D F Y +++ R+ EA + E M+S P++ +YNT+I + + RVDE +EL
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
++ + G + T+T +IHG +A+ + A M S G +++ + +LDGL
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 420 AGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKAT 475
G ++ AL FE ++ D +TY I++ +C+A + + G + T
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 476 RRAVIDGLISDGLKNEA 492
++ G GLK EA
Sbjct: 539 YTTMMSGFCRKGLKEEA 555
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 223/457 (48%), Gaps = 6/457 (1%)
Query: 35 QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTF 94
RI+ + ++ +++ G + N I + + + +A ++ V G PD+VT+
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
+++ C+ D +L++M++ + P V+ YN+++ L++F +M
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVH 214
IRP+V +YN L+ C G +A+R+ D ++ + +P+ T++ +I+ K G +
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD-MIERKINPNVVTFSALIDAFVKEGKLV 343
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
A ++ + +R P++ TY++LING C R +EA+ + PN +T+ T++
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 275 NCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
+ R+++G+E+ EM +G + Y T++ + A + +QM+S+GV
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 335 PDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQH 394
PD+ +Y+ ++ G+V+ AL + + +++ D YT+ I+I G+CKA ++ +
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 395 LDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCR 450
++ G N+V ++ G + G + A F M+ + DS TY L+ R
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 451 ARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
+++ + C F V A+ ++ ++ DG
Sbjct: 584 DGDKAASAELIREMRSCRF-VGDASTIGLVTNMLHDG 619
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 177/360 (49%), Gaps = 1/360 (0%)
Query: 32 FLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDV 91
F R + + + R++VKG I + +CK +D A +L + + P V
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
V +NT+IDA C + + + + M G+ P+V++YNSL+ G + +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
MIE +I P+V +++ L+ + + G EA +++ D ++ DP TY+ +ING C +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLY-DEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
+ A MF + + P V+TYN LI G CKA+R +E L E + G N +T+T
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
T+++ F+ + + +M S G D Y ++ L G+V A + E + +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
+EPD+ +YN MI + G+V++ +L + +G + T+T ++ G C+ EA
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 141/287 (49%), Gaps = 4/287 (1%)
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
+ +A+++F ++ + P ++ ++ L++ + K + + L + + G N T++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
++NC R +L L +L +M GY D +++ R+ +A + QM+ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
+PD ++NT+I+ FR R EA+ LVD++ +G D T+ I+++GLCK ++ A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNL 448
L M +V N ++D L +++ AL F M+ + + TY L+ L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 449 CRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
C R+ AS+ L ++ T A+ID + +G EA+K+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 210/402 (52%), Gaps = 5/402 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N+ I +C++ ++ K +L D K + P+ VT+NTLI+ + ++L M
Sbjct: 307 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 366
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GL+P+ +++N+L+ G + +G F L MF M + P SY +L+ + D
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 426
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A R F + TY MI+GLCKNG++ A+ + + + G P+++TY+ALI
Sbjct: 427 A-RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
NG CK R A+ ++ G PN I ++T++ C R G L++ + I M +G+T
Sbjct: 486 NGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT 545
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D F + +V +L K G+V EA+E M S+G+ P+ S++ +I Y G +A +
Sbjct: 546 RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 605
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
D++ K G +T+ ++ GLCK L EA + L ++++ + V N +L + K
Sbjct: 606 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 665
Query: 420 AGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCA 457
+G++ +A+ F M R DS+TYT L+ LCR + + A
Sbjct: 666 SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 707
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 223/489 (45%), Gaps = 53/489 (10%)
Query: 18 THPAILNHENPITSFLTQRITHSKNVTFRIM-VKGRSLSTKFLNICIASMCKAKQLDKAE 76
++P++ ++ I +L + + FR+M + G + S N + S+ K+ +
Sbjct: 161 SNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 77 CVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGA 136
L + +K + PDV TFN LI+ C SF+ ++++M+++G P +++YN+++
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 137 VRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAE---- 192
+KG F + + D M + DV +YN+L+H R +NR+ K LL +
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR------SNRIAKGYLLLRDMRKR 332
Query: 193 -TDPSTATYNVMINGLCKNGYV-----------------------------------HNA 216
P+ TYN +ING G V A
Sbjct: 333 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 392
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC 276
L MF ++ +G P ++Y L++GLCK + AR + G IT+T +++
Sbjct: 393 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 277 CFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPD 336
+ G L++ + +L EM G D Y ++ K GR A EI ++ G+ P+
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 512
Query: 337 LASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLD 396
Y+T+IY R G + EA+ + + + EG D +T +++ LCKA ++ EA + +
Sbjct: 513 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572
Query: 397 HMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS----FTYTILVHNLCRAR 452
M S G N V+ +C+++G G +G +A F+ M FTY L+ LC+
Sbjct: 573 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 632
Query: 453 RFLCASKHL 461
A K L
Sbjct: 633 HLREAEKFL 641
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 196/415 (47%), Gaps = 10/415 (2%)
Query: 45 FRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRF 104
+ + KG + S + + +CK + D A + + GV +T+ +ID C+
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 105 VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY 164
D +L M + G+ PD+++Y++L++G + G F + ++ + P+ Y
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ 224
+ L++ R+G EA R+++ ++L T T+NV++ LCK G V A R +
Sbjct: 517 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF-TFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 225 RRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLE 284
G +P ++++ LING + +A + E + GH P T+ +++ + G L
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 285 QGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
+ + L + + D Y T++ A+ K+G + +A + +M+ + PD +Y ++I
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 345 YLYFRQGRVDEALELVDQIEKEGPGN---DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
R+G+ A+ E E GN ++ +T + G+ KA + + + M++L
Sbjct: 696 SGLCRKGKTVIAILFAK--EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 753
Query: 402 GFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS----FTYTILVHNLCRAR 452
G ++V +N ++DG + G I++ M ++ TY IL+H + +
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 183/404 (45%), Gaps = 8/404 (1%)
Query: 20 PAILNHENPITSFL-TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECV 78
P I+ + I F R +K + RI G S + + I + C+ L +A +
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
+ G D TFN L+ + C+ E + M G+ P+ +S++ L++G
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 595
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
G +FD+M + P ++Y L+ + G EA + K L + T
Sbjct: 596 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS-LHAVPAAVDTV 654
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
YN ++ +CK+G + A+S+F + +R +P+ TY +LI+GLC+ + A E
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEA 714
Query: 259 REAGHE-PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGR 317
G+ PN + +T ++ F+ G+ + G+ +M + G+T D ++ + G+
Sbjct: 715 EARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGK 774
Query: 318 VVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI 377
+ + +++ +M + P+L +YN +++ Y ++ V + L I G D+ T
Sbjct: 775 IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 834
Query: 378 IIHGLCKAKRLNEAVQHLDHMNSLG-----FGFNLVASNCVLDG 416
++ G+C++ L ++ L G + FN++ S C +G
Sbjct: 835 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 878
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 155/346 (44%), Gaps = 19/346 (5%)
Query: 166 ILMHCYFRLGMPDEANRVFKDV-LLSAET--------------DPSTATYNVMINGLCKN 210
I H R M D A + K++ L+S ++ + + + Y+++I +
Sbjct: 117 ITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLRE 176
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
G + ++L +FR + GF P V T NA++ + K+ L E + P+ TF
Sbjct: 177 GMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATF 236
Query: 271 TTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS 330
++N G E+ ++ +M GY Y TV+ K GR A E+ + M S
Sbjct: 237 NILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS 296
Query: 331 NGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
GV+ D+ +YN +I+ R R+ + L+ + K ++ T+ +I+G ++
Sbjct: 297 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 356
Query: 391 AVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVH 446
A Q L+ M S G N V N ++DG G+ ALK F ME + +Y +L+
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 447 NLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
LC+ F A + + G V + T +IDGL +G +EA
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 192/436 (44%), Gaps = 41/436 (9%)
Query: 53 SLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR--------- 103
++ T N + +MCK+ L KA + + V+ +LPD T+ +LI CR
Sbjct: 650 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 709
Query: 104 --------------------FV-------SFDAGCEVLERMKEAGLTPDVISYNSLMSGA 136
FV + AG E+M G TPD+++ N+++ G
Sbjct: 710 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 769
Query: 137 VRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPS 196
R G T + +M P++ +YNIL+H Y + + +++ ++L+ P
Sbjct: 770 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG-ILPD 828
Query: 197 TATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
T + ++ G+C++ + L + + RG + T+N LI+ C N A L+
Sbjct: 829 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 888
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
G + T +++ R R ++ +L EM +G + + Y ++ L + G
Sbjct: 889 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 948
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHT 376
+ A + E+M+++ + P + + M+ + G+ DEA L+ + K + T
Sbjct: 949 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 1008
Query: 377 IIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME-- 434
++H CK + EA++ M++ G +LV+ N ++ GL G + A + +E M+
Sbjct: 1009 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1068
Query: 435 --VRDSFTYTILVHNL 448
+ ++ TY L+ L
Sbjct: 1069 GFLANATTYKALIRGL 1084
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 194/434 (44%), Gaps = 14/434 (3%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ +CK L +AE L + D V +NTL+ A C+ + + M + +
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCY----FRLGMPD 178
PD +Y SL+SG RKG + + +F K E+E R +V ++ C+ F+ G
Sbjct: 685 LPDSYTYTSLISGLCRKGKTVIAI-LFAK--EAEARGNVLPNKVMYTCFVDGMFKAGQW- 740
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+A F++ + + P T N MI+G + G + + + + P + TYN L
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAIT-FTTVMNCCFRCGRLEQGLEILTEMRSKG 297
++G K + + + L G P+ +T + V+ C LE GL+IL +G
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC-ESNMLEIGLKILKAFICRG 859
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
D + + +++ G + A ++ + M S G+ D + + M+ + R R E+
Sbjct: 860 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 919
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
++ ++ K+G + + +I+GLC+ + A + M + VA + ++ L
Sbjct: 920 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 979
Query: 418 GKAGHIDRA---LKFFEGMEVRDSF-TYTILVHNLCRARRFLCASKHLVACLQCGFQVLK 473
K G D A L+F M++ + ++T L+H C+ + A + V CG ++
Sbjct: 980 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 1039
Query: 474 ATRRAVIDGLISDG 487
+ +I GL + G
Sbjct: 1040 VSYNVLITGLCAKG 1053
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 6/246 (2%)
Query: 254 LLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
L++ +R P+ + ++ R G ++ LEI M G+ + ++ ++V
Sbjct: 152 LMTTYRLCNSNPS--VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 209
Query: 314 KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQY 373
K+G V ++M+ + PD+A++N +I + +G +++ L+ ++EK G
Sbjct: 210 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 269
Query: 374 THTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
T+ ++H CK R A++ LDHM S G ++ N ++ L ++ I + M
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329
Query: 434 EVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLK 489
R + TY L++ + L AS+ L L G T A+IDG IS+G
Sbjct: 330 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389
Query: 490 NEAKKV 495
EA K+
Sbjct: 390 KEALKM 395
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 112/275 (40%), Gaps = 37/275 (13%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N+ I+ C +++ A ++ LG+ D T + ++ R F VL M
Sbjct: 867 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
+ G++P+ Y L++G R G + ++MI +I P + + ++ + G D
Sbjct: 927 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
EA + + +L + P+ A++ +++ CKNG V AL + + G ++++YN L
Sbjct: 987 EATLLLR-FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1045
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I GLC G + E+ EM+ G+
Sbjct: 1046 ITGLCAK-----------------------------------GDMALAFELYEEMKGDGF 1070
Query: 299 TFDGFAYCTVVAALV-KTGRVVEADEIAEQMMSNG 332
+ Y ++ L+ + AD I + +++ G
Sbjct: 1071 LANATTYKALIRGLLARETAFSGADIILKDLLARG 1105
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 215/408 (52%), Gaps = 5/408 (1%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG + S L+I I C+ ++L A + +KLG PD V FNTL++ C
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE 176
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
E+++RM E G P +I+ N+L++G G + + D+M+E+ +P+ +Y +++
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
+ G A + + + Y+++I+GLCK+G + NA ++F ++ +GF
Sbjct: 237 VMCKSGQTALAMELLRK-MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
+++TYN LI G C A R ++ +LL + + PN +TF+ +++ + G+L + ++
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
L EM +G + Y +++ K R+ EA ++ + M+S G +PD+ ++N +I Y +
Sbjct: 356 LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
R+D+ LEL ++ G + T+ ++ G C++ +L A + M S ++V+
Sbjct: 416 ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 410 SNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARR 453
+LDGL G +++AL+ F +E D Y I++H +C A +
Sbjct: 476 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK 523
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 224/458 (48%), Gaps = 7/458 (1%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDG-VKLGVLPDVVTF 94
R++ + + R++ G + LN + +C ++ A VLID V+ G P+ VT+
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA-VVLIDRMVETGFQPNEVTY 231
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
+++ C+ E+L +M+E + D + Y+ ++ G + G ++F++M
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVH 214
+ D+ +YN L+ + G D+ ++ +D ++ + P+ T++V+I+ K G +
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRD-MIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
A + + + +RG P +TYN+LI+G CK R EA +++ G +P+ +TF ++
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 275 NCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
N + R++ GLE+ EM +G + Y T+V ++G++ A ++ ++M+S V
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 335 PDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQH 394
PD+ SY ++ G +++ALE+ +IEK D + IIIHG+C A ++++A
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Query: 395 LDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM----EVRDSFTYTILVHNLCR 450
+ G + A N ++ L + + +A F M D TY IL+
Sbjct: 531 FCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590
Query: 451 ARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGL 488
A++ + GF +T + VI+ L S L
Sbjct: 591 DDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGEL 628
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 159/331 (48%), Gaps = 8/331 (2%)
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
D+A +F+D++ S P+ +N + + + K L++ + ++ +G + T +
Sbjct: 70 DDAVDLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN-CCFRCGRLEQGLEILTEMRSK 296
+IN C+ R+ + A + + + G+EP+ + F T++N C C R+ + LE++ M
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC-RVSEALELVDRMVEM 187
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA 356
G+ T+V L G+V +A + ++M+ G +P+ +Y ++ + + G+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 357 LELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDG 416
+EL+ ++E+ D ++III GLCK L+ A + M GF +++ N ++ G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 417 LGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVL 472
AG D K M R + T+++L+ + + + A + L +Q G
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 473 KATRRAVIDGLISDGLKNEA-KKVRLKIRKA 502
T ++IDG + EA + V L I K
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 111/284 (39%), Gaps = 49/284 (17%)
Query: 20 PAILNHENPITSFLTQ-RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECV 78
P + + + I F + R+ + + ++ KG NI I CKA ++D
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID----- 420
Query: 79 LIDGVKL-------GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNS 131
DG++L GV+ + VT+NTL+ +C+ + ++ + M + PD++SY
Sbjct: 421 --DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 132 LMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVF------- 184
L+ G G L +F K+ +S++ D+ Y I++H D+A +F
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 185 -----------------------KDVLLSAETD----PSTATYNVMINGLCKNGYVHNAL 217
D+L T+ P TYN++I + A
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 218 SMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
+ ++ GF +V T +IN L +LS R +
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRAS 642
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 227/449 (50%), Gaps = 5/449 (1%)
Query: 49 VKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFD 108
+KG + + L+I I C+ ++L A + +KLG P+ +TF+TLI+ C
Sbjct: 116 LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 175
Query: 109 AGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILM 168
E+++RM E G PD+I+ N+L++G G + + DKM+E +P+ +Y ++
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 169 HCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF 228
+ + G A + + + Y+++I+GLCK+G + NA ++F ++ +G
Sbjct: 236 NVMCKSGQTALAMELLRK-MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 229 VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLE 288
++TYN LI G C A R ++ +LL + + PN +TF+ +++ + G+L + E
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 289 ILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYF 348
+ EM +G D Y +++ K + +A+++ + M+S G +P++ ++N +I Y
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 349 RQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLV 408
+ R+D+ LEL ++ G D T+ +I G C+ +LN A + M S N+V
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 409 ASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVAC 464
+LDGL G ++AL+ FE +E D Y I++H +C A + A +
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Query: 465 LQCGFQVLKATRRAVIDGLISDGLKNEAK 493
G + T +I GL G +EA+
Sbjct: 535 PLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 228/459 (49%), Gaps = 6/459 (1%)
Query: 33 LTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVV 92
L R++ + + R++ G +N + +C + + +A ++ V+ G P+ V
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
T+ +++ C+ E+L +M+E + D + Y+ ++ G + G ++F++M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
I ++ +YNIL+ + G D+ ++ +D ++ + +P+ T++V+I+ K G
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD-MIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
+ A + + + RG P+ +TY +LI+G CK ++A +++ G +PN TF
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
++N + R++ GLE+ +M +G D Y T++ + G++ A E+ ++M+S
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
V P++ +Y ++ G ++ALE+ ++IEK D + IIIHG+C A ++++A
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNL 448
+ G + N ++ GL K G + A F ME D +TY IL+
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588
Query: 449 CRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
+ K + +CGF V +T + VID ++SDG
Sbjct: 589 LGDGDATKSVKLIEELKRCGFSVDASTIKMVID-MLSDG 626
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 155/322 (48%), Gaps = 5/322 (1%)
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
D+A +F+D++ S P+ ++ + + + K L++ + ++ +G + T +
Sbjct: 70 DDAIDLFRDMIHSRPL-PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
+IN C+ R+ A + + + G+EPN ITF+T++N GR+ + LE++ M G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
+ D T+V L +G+ EA + ++M+ G +P+ +Y ++ + + G+ A+
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
EL+ ++E+ D ++III GLCK L+ A + M G N++ N ++ G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 418 GKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLK 473
AG D K M R + T+++L+ + + + A + + G
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 474 ATRRAVIDGLISDGLKNEAKKV 495
T ++IDG + ++A ++
Sbjct: 369 ITYTSLIDGFCKENHLDKANQM 390
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 232/448 (51%), Gaps = 7/448 (1%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
+ I I C+ K+L A VL KLG PD +TF+TL++ +C +++RM
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
E PD+++ ++L++G KG L + D+M+E +PD +Y +++ + G
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
A +F+ + S Y+++I+ LCK+G +ALS+F ++ +G +V+TY++L
Sbjct: 228 LALDLFRK-MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I GLC + ++ ++L E P+ +TF+ +++ + G+L + E+ EM ++G
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
D Y +++ K + EA+++ + M+S G EPD+ +Y+ +I Y + RVD+ +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
L +I +G + T+ ++ G C++ +LN A + M S G ++V +LDGL
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 419 KAGHIDRALKFFEGMEVRDSFT-----YTILVHNLCRARRFLCASKHLVACLQCGFQVLK 473
G +++AL+ FE M+ + T Y I++H +C A + A + G +
Sbjct: 467 DNGELNKALEIFEKMQ-KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
Query: 474 ATRRAVIDGLISDGLKNEAKKVRLKIRK 501
T +I GL G +EA + K+++
Sbjct: 526 VTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 184/358 (51%), Gaps = 1/358 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
+I I S+CK D A + + G+ DVVT+++LI C +D G ++L M
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
+ PDV+++++L+ V++G ++++MI I PD +YN L+ + + E
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
AN++F D+++S +P TY+++IN CK V + + +FR + +G +P +TYN L+
Sbjct: 369 ANQMF-DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
G C++ + N A+ L E G P+ +T+ +++ G L + LEI +M+ T
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
Y ++ + +V +A + + GV+PD+ +YN MI ++G + EA L
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
+++++G D +T+ I+I L +V+ ++ M GF + V+D L
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 230/509 (45%), Gaps = 47/509 (9%)
Query: 23 LNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKF------LNICIASMCKAKQLDKAE 76
+ H+ + + K + F V GR+ + + + C ++ +A
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 77 CVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGA 136
++ V++ PD+VT +TLI+ C +++RM E G PD ++Y +++
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 137 VRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPS 196
+ G + L +F KM E I+ V Y+I++ + G D+A +F ++ +
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG-IKAD 279
Query: 197 TATYNVMINGLCKNGYVHNALSMFR----------------------------------- 221
TY+ +I GLC +G + M R
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 222 NLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCG 281
+ RG P+ +TYN+LI+G CK +EA ++ G EP+ +T++ ++N +
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 282 RLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYN 341
R++ G+ + E+ SKG + Y T+V ++G++ A E+ ++M+S GV P + +Y
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 342 TMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
++ G +++ALE+ ++++K + IIIHG+C A ++++A ++
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 402 GFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCA 457
G ++V N ++ GL K G + A F M+ D FTY IL+ + +
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 458 SKHLVACLQCGFQVLKATRRAVIDGLISD 486
+ + CGF +T + VID ++SD
Sbjct: 580 VELIEEMKVCGFSADSSTIKMVID-MLSD 607
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 217/467 (46%), Gaps = 45/467 (9%)
Query: 45 FRIMVKGRSLST--KFLNICIASMCKAKQLDKAECVLIDGVKL-GVLPDVVTFNTLIDAY 101
F M++ R L T F +C +++ + KQ D G++L G+ D+ T +I+ Y
Sbjct: 58 FESMIQSRPLPTPIDFNRLC-SAVARTKQYDLV-LGFCKGMELNGIEHDMYTMTIMINCY 115
Query: 102 CRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDV 161
CR VL R + G PD I++++L++G +G + + D+M+E + RPD+
Sbjct: 116 CRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL 175
Query: 162 WSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFR 221
T + +INGLC G V AL +
Sbjct: 176 ------------------------------------VTVSTLINGLCLKGRVSEALVLID 199
Query: 222 NLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCG 281
+ GF P+ +TY ++N LCK+ + A L + E + + + ++ V++ + G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 282 RLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYN 341
+ L + EM KG D Y +++ L G+ + ++ +M+ + PD+ +++
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 342 TMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
+I ++ ++G++ EA EL +++ G D T+ +I G CK L+EA Q D M S
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 402 GFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCA 457
G ++V + +++ KA +D ++ F + + ++ TY LV C++ + A
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 458 SKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQL 504
+ + G T ++DGL +G N+A ++ K++K+++
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 143/310 (46%), Gaps = 7/310 (2%)
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSA-ETDPSTATYNVMI 204
+ +F+ MI+S P +N L R D K + L+ E D T T +MI
Sbjct: 55 IDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT--IMI 112
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
N C+ + A S+ + G+ P+ +T++ L+NG C R +EA L+ E
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
P+ +T +T++N GR+ + L ++ M G+ D Y V+ L K+G A ++
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
+M ++ + Y+ +I + G D+AL L +++E +G D T++ +I GLC
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFT 440
+ ++ + L M ++V + ++D K G + A + + M R D+ T
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 441 YTILVHNLCR 450
Y L+ C+
Sbjct: 353 YNSLIDGFCK 362
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 37/273 (13%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMV-KGRSLSTKFLNICIASMCKAKQLDKAECV 78
P + + + I F + H N F +MV KG +I I S CKAK++D +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
+ G++P+ +T+NTL+ +C+ +A E+ + M G+ P V++Y L+ G
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 139 KGLFPMTLHMFDKMIESE-----------------------------------IRPDVWS 163
G L +F+KM +S ++PDV +
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
YN+++ + G EA+ +F+ + T P TYN++I + +++ + +
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCT-PDDFTYNILIRAHLGGSGLISSVELIEEM 586
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
+ GF + T +I+ L R +LS
Sbjct: 587 KVCGFSADSSTIKMVIDMLSDRRLDKSFLDMLS 619
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 211/411 (51%), Gaps = 5/411 (1%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
PDV +N LI+ +C+ D VL+RM+ +PD ++YN ++ +G + L +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
++++ +P V +Y IL+ G DEA ++ D +LS P TYN +I G+C
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM-DEMLSRGLKPDMFTYNTIIRGMC 274
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
K G V A M RNL+ +G P+V++YN L+ L + E +L+++ +PN +
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
T++ ++ R G++E+ + +L M+ KG T D ++Y ++AA + GR+ A E E M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
+S+G PD+ +YNT++ + G+ D+ALE+ ++ + G + ++ + L +
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM---EVRDS-FTYTIL 444
A+ + M S G + + N ++ L + G +D A + M E S TY I+
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 445 VHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
+ C+A R A L + + G + + T +I+G+ G + EA ++
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 206/414 (49%), Gaps = 2/414 (0%)
Query: 17 FTHPAILNHENPITSFLT-QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKA 75
F P + + I F RI + V R+ K S T NI I S+C +LD A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 76 ECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSG 135
VL + P V+T+ LI+A D ++++ M GL PD+ +YN+++ G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 136 AVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDP 195
++G+ M + PDV SYNIL+ G +E ++ + S + DP
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK-MFSEKCDP 331
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
+ TY+++I LC++G + A+++ + ++ +G P+ +Y+ LI C+ R + A L
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 256 SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT 315
G P+ + + TV+ + G+ +Q LEI ++ G + + +Y T+ +AL +
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 316 GRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTH 375
G + A + +MMSNG++PD +YN+MI R+G VDEA EL+ + T+
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 376 TIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKF 429
I++ G CKA R+ +A+ L+ M G N +++G+G AG+ A++
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 205/407 (50%), Gaps = 6/407 (1%)
Query: 102 CRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDV 161
CR ++ +LE M G PDVI L+ G P + + + ++E +PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDV 158
Query: 162 WSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFR 221
++YN L++ + ++ D+A RV D + S + P T TYN+MI LC G + AL +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVL-DRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 222 NLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCG 281
L P V+TY LI +EA +L+ E G +P+ T+ T++ + G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 282 RLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYN 341
+++ E++ + KG D +Y ++ AL+ G+ E +++ +M S +P++ +Y+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 342 TMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
+I R G+++EA+ L+ ++++G D Y++ +I C+ RL+ A++ L+ M S
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 402 GFGFNLVASNCVLDGLGKAGHIDRALKFFEGM-EV---RDSFTYTILVHNLCRARRFLCA 457
G ++V N VL L K G D+AL+ F + EV +S +Y + L + + A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 458 SKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQL 504
++ + G + T ++I L +G+ +EA ++ + +R +
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 1/270 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI + ++ + ++ E ++ P+VVT++ LI CR + +L+ MKE
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GLTPD SY+ L++ R+G + + + MI PD+ +YN ++ + G D+
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A +F L P++++YN M + L +G AL M + G P+ +TYN++I
Sbjct: 422 ALEIFGK-LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ LC+ +EA LL + R P+ +T+ V+ + R+E + +L M G
Sbjct: 481 SCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
+ Y ++ + G EA E+A ++
Sbjct: 541 PNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 2/240 (0%)
Query: 20 PAILNHENPITSFLTQ-RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECV 78
P ++ + IT+ +I + N+ + KG + + IA+ C+ +LD A
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
L + G LPD+V +NT++ C+ D E+ ++ E G +P+ SYN++ S
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
G LHM +M+ + I PD +YN ++ C R GM DEA + D + S E PS
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD-MRSCEFHPSVV 509
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
TYN+++ G CK + +A+++ ++ G P TY LI G+ A EA L ++
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 67/138 (48%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAG 110
G S ++ N +++ + +A ++++ + G+ PD +T+N++I CR D
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Query: 111 CEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHC 170
E+L M+ P V++YN ++ G + +++ + M+ + RP+ +Y +L+
Sbjct: 493 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Query: 171 YFRLGMPDEANRVFKDVL 188
G EA + D++
Sbjct: 553 IGFAGYRAEAMELANDLV 570
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 226/446 (50%), Gaps = 5/446 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
+I I C+ QL A VL +KLG PD+VT ++L++ YC ++++M E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G PD ++ +L+ G + + D+M++ +PD+ +Y +++ + G D
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + K + + + YN +I+GLCK ++ +AL++F + +G P+V TY++LI
Sbjct: 242 ALSLLKK-MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ LC R ++A RLLS+ E PN +TF+ +++ + G+L + ++ EM +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D F Y +++ R+ EA + E M+S P++ +Y+T+I + + RV+E +EL
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
++ + G + T+T +IHG +A+ + A M S+G N++ N +LDGL K
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 420 AGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKAT 475
G + +A+ FE ++ D +TY I++ +C+A + + G
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 476 RRAVIDGLISDGLKNEAKKVRLKIRK 501
+I G G K EA + K+++
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKE 566
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 213/409 (52%), Gaps = 6/409 (1%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
V+ G PD+VT+ T+++ C+ D +L++M++ + DV+ YN+++ G +
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM 274
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
L++F +M IRPDV++Y+ L+ C G +A+R+ D ++ + +P+ T++
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD-MIERKINPNVVTFSA 333
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+I+ K G + A ++ + +R P++ TY++LING C R +EA+ +
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
PN +T++T++ + R+E+G+E+ EM +G + Y T++ + A
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+ +QM+S GV P++ +YN ++ + G++ +A+ + + +++ D YT+ I+I G+
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDS 438
CKA ++ + + +++ G N++A N ++ G + G + A + M+ + +S
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 439 FTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
TY L+ R +++ + CGF A+ ++ ++ DG
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAG-DASTIGLVTNMLHDG 621
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 197/422 (46%), Gaps = 40/422 (9%)
Query: 105 VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY 164
+ D ++ M ++ P ++ +N L+S + F + + + ++M I D+++Y
Sbjct: 62 IKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ 224
+I ++C+ R A V ++ +P T + ++NG C + + +A+++ +
Sbjct: 122 SIFINCFCRRSQLSLALAVLAK-MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 225 RRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCG--- 281
G+ P+ T+ LI+GL +A+EA L+ + + G +P+ +T+ TV+N + G
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 282 -------RLEQG-------------------------LEILTEMRSKGYTFDGFAYCTVV 309
++E+G L + TEM +KG D F Y +++
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 310 AALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPG 369
+ L GR +A + M+ + P++ +++ +I + ++G++ EA +L D++ K
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 370 NDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKF 429
D +T++ +I+G C RL+EA + M S N+V + ++ G KA ++ ++
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 430 FEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLIS 485
F M R ++ TYT L+H +AR A + G T ++DGL
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 486 DG 487
+G
Sbjct: 481 NG 482
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 142/287 (49%), Gaps = 4/287 (1%)
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
V +A+ +F ++ + P ++ +N L++ + K + L + + G + T++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
+NC R +L L +L +M GY D +++ + R+ +A + +QM+ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
+PD ++ T+I+ F + EA+ LVDQ+ + G D T+ +++GLCK ++ A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNL 448
L M ++V N ++DGL K H+D AL F M+ + D FTY+ L+ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 449 CRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
C R+ AS+ L ++ T A+ID + +G EA+K+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 2/238 (0%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMV-KGRSLSTKFLNICIASMCKAKQLDKAECV 78
P ++ + I F + FR M +G +T I +A+ D A+ V
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
V +GV P+++T+N L+D C+ V E ++ + + PD+ +YN ++ G +
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
G +F + + P+V +YN ++ + R G +EA+ + K + P++
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSG 574
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
TYN +I ++G + + + ++ GF + T + N L R +LS
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 632
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 228/450 (50%), Gaps = 10/450 (2%)
Query: 5 AAPALHFNAAYPFTHPAILNHENPITSFLTQR--ITHSKNVTFRIMVKGRSLSTKF-LNI 61
A +H A+ F P +L++ + + + + I+ ++NV F+ M++ + F NI
Sbjct: 153 ALSIVHLAQAHGFM-PGVLSYNAVLDATIRSKRNISFAENV-FKEMLESQVSPNVFTYNI 210
Query: 62 CIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAG 121
I C A +D A + G LP+VVT+NTLID YC+ D G ++L M G
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 122 LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
L P++ISYN +++G R+G + +M D +YN L+ Y + G +A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
+ ++L T PS TY +I+ +CK G ++ A+ ++ RG P TY L++G
Sbjct: 331 VMHAEMLRHGLT-PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
+ NEA R+L E + G P+ +T+ ++N G++E + +L +M+ KG + D
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
+Y TV++ ++ V EA + +M+ G++PD +Y+++I + Q R EA +L +
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 362 QIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
++ + G D++T+T +I+ C L +A+Q + M G ++V + +++GL K
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 422 HIDRA----LKFFEGMEVRDSFTYTILVHN 447
A LK F V TY L+ N
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 229/453 (50%), Gaps = 12/453 (2%)
Query: 55 STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRF---VSFDAGC 111
++ ++ + S + +DKA ++ G +P V+++N ++DA R +SF
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAEN- 191
Query: 112 EVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCY 171
V + M E+ ++P+V +YN L+ G G + L +FDKM P+V +YN L+ Y
Sbjct: 192 -VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 172 FRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
+L D+ ++ + + L +P+ +YNV+INGLC+ G + + + RRG+ +
Sbjct: 251 CKLRKIDDGFKLLRSMALKG-LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILT 291
+TYN LI G CK ++A + +E G P+ IT+T++++ + G + + +E L
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 292 EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG 351
+MR +G + Y T+V + G + EA + +M NG P + +YN +I + G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 352 RVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASN 411
++++A+ +++ ++++G D +++ ++ G C++ ++EA++ M G + + +
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 412 CVLDGLGKAGHIDRALKFFEGMEVR-----DSFTYTILVHNLCRARRFLCASKHLVACLQ 466
++ G + A +E M +R D FTYT L++ C A + ++
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEM-LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 467 CGFQVLKATRRAVIDGLISDGLKNEAKKVRLKI 499
G T +I+GL EAK++ LK+
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 190/416 (45%), Gaps = 51/416 (12%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N+ I +C+ ++ + VL + + G D VT+NTLI YC+ +F + M
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GLTP VI+Y SL+ + G + D+M + P+ +Y L+ + + G +E
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A RV +++ + + PS TYN +ING C G + +A+++ +++ +G P+V++Y+ ++
Sbjct: 399 AYRVLREMNDNGFS-PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+G C++ +EA R+ E E G +P+ IT+++++ R ++ ++ EM G
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D F Y ++ A G + +A ++ +M+ GV PD+ +Y+ +I +Q R EA L
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 360 V----------------------------------------------DQIEKEGPGN--- 370
+ DQ+ + G
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 371 -DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDR 425
D + I+IHG C+A + +A M GF + V ++ L K G ++
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 157/315 (49%), Gaps = 9/315 (2%)
Query: 176 MPDE-ANRVFKDVLLSAETDPSTAT-YNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
+ DE A+ VFK + + + ST++ +++++ + + ALS+ Q GF+P VL
Sbjct: 111 LDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVL 170
Query: 234 TYNALINGLCKARR-ANEARRLLSEFREAGHEPNAITFTTVM-NCCFRCGRLEQGLEILT 291
+YNA+++ +++R + A + E E+ PN T+ ++ CF G ++ L +
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCF-AGNIDVALTLFD 229
Query: 292 EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG 351
+M +KG + Y T++ K ++ + ++ M G+EP+L SYN +I R+G
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 289
Query: 352 RVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASN 411
R+ E ++ ++ + G D+ T+ +I G CK ++A+ M G +++
Sbjct: 290 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 349
Query: 412 CVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQC 467
++ + KAG+++RA++F + M VR + TYT LV + A + L
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 468 GFQVLKATRRAVIDG 482
GF T A+I+G
Sbjct: 410 GFSPSVVTYNALING 424
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 228/446 (51%), Gaps = 5/446 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI I C+ Q+ A +L +KLG P +VT ++L++ YC ++++M E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G PD I++ +L+ G + + D+M++ +P++ +Y ++++ + G D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + + +A+ + + Y+ +I+ LCK + +AL++F ++ +G P V+TY++LI
Sbjct: 244 AFNLLNK-MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ LC R ++A RLLS+ E PN +TF +++ + G+L + ++ EM +
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D F Y +++ R+ EA + E M+S P++ +YNT+I + + R+DE +EL
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
++ + G + T+T +IHG +A+ + A M S G N++ N +LDGL K
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 420 AGHIDRALKFFEGMEVRDS----FTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKAT 475
G +++A+ FE ++ +TY I++ +C+A + + G +
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542
Query: 476 RRAVIDGLISDGLKNEAKKVRLKIRK 501
+I G GLK EA + K+R+
Sbjct: 543 YNTMISGFCRKGLKEEADALFRKMRE 568
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 170/312 (54%), Gaps = 1/312 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I S+CK + D A + + GV P+V+T+++LI C + + +L M E +
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P+V+++N+L+ V++G ++D+MI+ I PD+++Y+ L++ + DEA
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+F ++++S + P+ TYN +ING CK + + +FR + +RG V +TY LI+G
Sbjct: 387 MF-ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
+AR + A+ + + G PN +T+ T+++ + G+LE+ + + ++
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
+ Y ++ + K G+V + ++ + GV+PD+ YNTMI + R+G +EA L +
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 363 IEKEGPGNDQYT 374
+ ++GP D T
Sbjct: 566 MREDGPLPDSGT 577
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 165/333 (49%), Gaps = 10/333 (3%)
Query: 137 VRKGLFPMTLH----MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAE 192
+R GL M L +F M++S P ++ +N L+ ++ D + + +
Sbjct: 57 LRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISL-GEKMQRLG 115
Query: 193 TDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEAR 252
+ TYN++IN C+ + AL++ + + G+ P ++T ++L+NG C +R ++A
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 253 RLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAAL 312
L+ + E G+ P+ ITFTT+++ F + + + ++ M +G + Y VV L
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 313 VKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ 372
K G + A + +M + +E ++ Y+T+I + D+AL L ++E +G +
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 373 YTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEG 432
T++ +I LC +R ++A + L M N+V N ++D K G + A K ++
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 433 MEVR----DSFTYTILVHNLCRARRFLCASKHL 461
M R D FTY+ L++ C R L +KH+
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDR-LDEAKHM 387
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 189 LSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRA 248
L + +P A ++ + G+C G R F Y ++ + +
Sbjct: 21 LQGKGNPRIAPSSIDLCGMCYWG--------------RAFSSGSGDYREILRNGLHSMKL 66
Query: 249 NEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTV 308
++A L ++ P+ F +++ + + + + + +M+ G + + + Y +
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 309 VAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGP 368
+ + ++ A + +MM G EP + + ++++ Y R+ +A+ LVDQ+ + G
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 369 GNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALK 428
D T T +IHGL + +EAV +D M G NLV V++GL K G ID A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 429 FFEGMEV----RDSFTYTILVHNLCRAR 452
ME + Y+ ++ +LC+ R
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYR 274
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 225/476 (47%), Gaps = 22/476 (4%)
Query: 29 ITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVL 88
I F + TH N ++V G SL K + I A M G+
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSL--KLVEISHAKMSV----------------WGIK 186
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
PDV TFN LI A CR +LE M GL PD ++ ++M G + +G L +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
++M+E S N+++H + + G ++A +++ P T+N ++NGLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
K G+V +A+ + + + G+ P+V TYN++I+GLCK EA +L + PN +
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
T+ T+++ + ++E+ E+ + SKG D + +++ L T A E+ E+M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
S G EPD +YN +I +G++DEAL ++ Q+E G T+ +I G CKA +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM----EVRDSFTYTIL 444
EA + D M G N V N ++DGL K+ ++ A + + M + D +TY L
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 445 VHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIR 500
+ + CR A+ + A G + T +I GL G A K+ I+
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 215/458 (46%), Gaps = 46/458 (10%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
I+H+K + V G N+ I ++C+A QL A +L D G++PD TF
Sbjct: 174 EISHAK-----MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 228
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLT-------------------------------- 123
T++ Y D + E+M E G +
Sbjct: 229 TVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288
Query: 124 ----PDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
PD ++N+L++G + G + + D M++ PDV++YN ++ +LG E
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A V D +++ + P+T TYN +I+ LCK V A + R L +G +P+V T+N+LI
Sbjct: 349 AVEVL-DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
GLC R A L E R G EP+ T+ +++ G+L++ L +L +M G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
Y T++ K + EA+EI ++M +GV + +YNT+I + RV++A +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+DQ+ EG D+YT+ ++ C+ + +A + M S G ++V ++ GL K
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 420 AGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARR 453
AG ++ A K ++++ Y ++ L R R+
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRK 625
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 226/462 (48%), Gaps = 9/462 (1%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLID-GVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
G S S +N+ + CK +++ A + + + G PD TFNTL++ C+
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
E+++ M + G PDV +YNS++SG + G + + D+MI + P+ +YN L+
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
+ +EA + + VL S P T+N +I GLC A+ +F ++ +G
Sbjct: 374 TLCKENQVEEATELAR-VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P+ TYN LI+ LC + +EA +L + +G + IT+ T+++ + + + EI
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
EM G + + Y T++ L K+ RV +A ++ +QM+ G +PD +YN+++ + R
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
G + +A ++V + G D T+ +I GLCKA R+ A + L + G A
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612
Query: 410 SNCVLDGLGKAGHIDRALKFFEGMEVR-----DSFTYTILVHNLCRARRFL-CASKHLVA 463
N V+ GL + A+ F M + D+ +Y I+ LC + A LV
Sbjct: 613 YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVE 672
Query: 464 CLQCGFQVLKATRRAVIDGLISDGLKNE-AKKVRLKIRKAQL 504
L+ GF ++ + +GL++ ++ K V + ++KA+
Sbjct: 673 LLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 179/369 (48%), Gaps = 3/369 (0%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT 96
+ H+ + ++ +G N I+ +CK ++ +A VL + P+ VT+NT
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
LI C+ + E+ + G+ PDV ++NSL+ G + + +F++M
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
PD ++YN+L+ G DEA + K + LS S TYN +I+G CK A
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG-CARSVITYNTLIDGFCKANKTREA 489
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC 276
+F ++ G +TYN LI+GLCK+RR +A +L+ + G +P+ T+ +++
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 277 CFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPD 336
R G +++ +I+ M S G D Y T+++ L K GRV A ++ + G+
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 337 LASYNTMIYLYFRQGRVDEALELV-DQIEKEGPGNDQYTHTIIIHGLCK-AKRLNEAVQH 394
+YN +I FR+ + EA+ L + +E+ D ++ I+ GLC + EAV
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF 669
Query: 395 LDHMNSLGF 403
L + GF
Sbjct: 670 LVELLEKGF 678
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 166/380 (43%), Gaps = 5/380 (1%)
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
K+ +P+ Y ++ R G F + + M S ++ IL+ Y + +
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
DE V ++ P T YN M+N L + + G P+V T+N
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LI LC+A + A +L + G P+ TFTTVM G L+ L I +M G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS-NGVEPDLASYNTMIYLYFRQGRVDEA 356
++ + +V K GRV +A ++M + +G PD ++NT++ + G V A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 357 LELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDG 416
+E++D + +EG D YT+ +I GLCK + EAV+ LD M + N V N ++
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 417 LGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVL 472
L K ++ A + + + D T+ L+ LC R A + G +
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 473 KATRRAVIDGLISDGLKNEA 492
+ T +ID L S G +EA
Sbjct: 435 EFTYNMLIDSLCSKGKLDEA 454
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 38/265 (14%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
++ + N+ ++ + G + S N I CKA + +AE + + GV + VT+N
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
TLID C+ + +++++M G PD +YNSL++ R G + M +
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN 215
PD+ +Y L I+GLCK G V
Sbjct: 570 GCEPDIVTYGTL------------------------------------ISGLCKAGRVEV 593
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH-EPNAITFTTVM 274
A + R++Q +G YN +I GL + R+ EA L E E P+A+++ V
Sbjct: 594 ASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVF 653
Query: 275 -NCCFRCGRLEQGLEILTEMRSKGY 298
C G + + ++ L E+ KG+
Sbjct: 654 RGLCNGGGPIREAVDFLVELLEKGF 678
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 84/212 (39%), Gaps = 40/212 (18%)
Query: 34 TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVT 93
++R+ + + +++++G+ N + C+ + KA ++ G PD+VT
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 94 FNTLIDAYCRFVSFDAGCEVLE--RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
+ TLI C+ + ++L +MK LTP +YN ++ G RK +++F +
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFRE 635
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK-N 210
M+E P P +Y ++ GLC
Sbjct: 636 MLEQNEAP-----------------------------------PDAVSYRIVFRGLCNGG 660
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
G + A+ L +GFVPE + L GL
Sbjct: 661 GPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 212/395 (53%), Gaps = 8/395 (2%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I S+ K ++++A +L + +G +PD TFN +I C+F + +++ RM G
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PD I+Y LM+G + G +F ++ +P++ +N L+H + G D+A
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
V D++ S P TYN +I G K G V AL + +++ +G P V +Y L++G
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
CK + +EA +L+E G +PN + F +++ + R+ + +EI EM KG D
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
+ + ++++ L + + A + M+S GV + +YNT+I + R+G + EA +LV++
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
+ +G D+ T+ +I GLC+A +++A + M G + ++ N +++GL ++G
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 423 IDRALKFFEGMEVR----DSFTYTILVHNLCRARR 453
++ A++F + M +R D T+ L++ LCRA R
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 215/420 (51%), Gaps = 12/420 (2%)
Query: 35 QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTF 94
RI + + R++++G + + +CK ++D A+ + K P++V F
Sbjct: 301 DRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIF 356
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEA-GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
NTLI + D VL M + G+ PDV +YNSL+ G ++GL + L + M
Sbjct: 357 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAE-TDPSTATYNVMINGLCKNGY 212
+P+V+SY IL+ + +LG DEA V + +SA+ P+T +N +I+ CK
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE--MSADGLKPNTVGFNCLISAFCKEHR 474
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
+ A+ +FR + R+G P+V T+N+LI+GLC+ A LL + G N +T+ T
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
++N R G +++ +++ EM +G D Y +++ L + G V +A + E+M+ +G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
P S N +I R G V+EA+E ++ G D T +I+GLC+A R+ + +
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHI-DRALKFFEGME---VRDSFTYTILVHNL 448
+ + G + V N ++ L K G + D L EG+E V + T++IL+ ++
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 226/474 (47%), Gaps = 21/474 (4%)
Query: 44 TFRIMVKGRSLST-----KFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLI 98
T R+M++ R++ + K N+ + + A V D + + P + TF ++
Sbjct: 165 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVM 224
Query: 99 DAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIR 158
A+C D+ +L M + G P+ + Y +L+ + L + ++M
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 159 PDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALS 218
PD ++N ++ + +EA ++ +L+ P TY ++NGLCK G V A
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA-PDDITYGYLMNGLCKIGRVDAAKD 343
Query: 219 MFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA-GHEPNAITFTTVMNCC 277
+F + + PE++ +N LI+G R ++A+ +LS+ + G P+ T+ +++
Sbjct: 344 LFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 278 FRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDL 337
++ G + LE+L +MR+KG + ++Y +V K G++ EA + +M ++G++P+
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459
Query: 338 ASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
+N +I + ++ R+ EA+E+ ++ ++G D YT +I GLC+ + A+ L
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 398 MNSLGFGFNLVASNCVLDGLGKAGHIDRALKF-----FEGMEVRDSFTYTILVHNLCRAR 452
M S G N V N +++ + G I A K F+G + D TY L+ LCRA
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL-DEITYNSLIKGLCRAG 578
Query: 453 RFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQLLR 506
A L+ G + +I+GL G+ EA ++ +K +LR
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA----VEFQKEMVLR 628
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 158/312 (50%), Gaps = 1/312 (0%)
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
VL D G P+V ++ L+D +C+ D VL M GL P+ + +N L+S
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
++ P + +F +M +PDV+++N L+ + A + +D ++S +T
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD-MISEGVVANT 529
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
TYN +IN + G + A + + +G + +TYN+LI GLC+A ++AR L +
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 258 FREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGR 317
GH P+ I+ ++N R G +E+ +E EM +G T D + +++ L + GR
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 318 VVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI 377
+ + + ++ + G+ PD ++NT++ + G V +A L+D+ ++G + T +I
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 378 IIHGLCKAKRLN 389
++ + + L+
Sbjct: 710 LLQSIIPQETLD 721
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 161/400 (40%), Gaps = 71/400 (17%)
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
+M Y + G P + R+ ++ +P+ +YNV++ L A ++F ++ R
Sbjct: 152 IMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR 211
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
P + T+ ++ C + A LL + + G PN++ + T+++ +C R+ +
Sbjct: 212 KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASY------ 340
L++L EM G D + V+ L K R+ EA ++ +M+ G PD +Y
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 341 -------------------------NTMIYLYFRQGRVDE-------------------- 355
NT+I+ + GR+D+
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 356 ----------------ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
ALE++ + +G + Y++TI++ G CK +++EA L+ M+
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFL 455
+ G N V NC++ K I A++ F M + D +T+ L+ LC
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 456 CASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
A L + G T +I+ + G EA+K+
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 132/308 (42%), Gaps = 4/308 (1%)
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
S Y V+I L NG + ++ G V + + +++ KA + RL+
Sbjct: 110 SFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLM 169
Query: 256 SEFREA-GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK 314
E R EP ++ V+ + + +M S+ F + V+ A
Sbjct: 170 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA 229
Query: 315 TGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYT 374
+ A + M +G P+ Y T+I+ + RV+EAL+L++++ G D T
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 375 HTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
+I GLCK R+NEA + ++ M GF + + +++GL K G +D A F +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 435 VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLK--ATRRAVIDGLISDGLKNEA 492
+ + L+H R L +K +++ + + ++ T ++I G +GL A
Sbjct: 350 KPEIVIFNTLIHGFVTHGR-LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 493 KKVRLKIR 500
+V +R
Sbjct: 409 LEVLHDMR 416
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 204/409 (49%), Gaps = 6/409 (1%)
Query: 45 FRIMV-KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
FR MV G ++ L I + +C+ +++K++ ++ + G+ P+ T+NT+I+AY +
Sbjct: 212 FRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVK 271
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
F VL+ MK+ G+ + ++Y LM +V+ G +FD+M E I DV
Sbjct: 272 QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
Y L+ R G A +F D L PS+ TY +I+G+CK G + A + +
Sbjct: 332 YTSLISWNCRKGNMKRAFLLF-DELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
Q +G + +N LI+G C+ +EA + + G + + T T+ +C R R
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
++ + L M G +Y ++ K G V EA + +M S GV+P+ +YN M
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
IY Y +QG++ EA +L +E G D YT+T +IHG C A ++EA++ M G
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNL 448
N V ++ GL KAG D A ++ M+ + D+ YT L+ ++
Sbjct: 571 DQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 156/372 (41%), Gaps = 42/372 (11%)
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ 224
+++ Y GM +E RVF D ++ + V + K + L +FR +
Sbjct: 158 DLVFRVYVDNGMFEEGLRVF-DYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMV 216
Query: 225 RRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLE 284
G V + ++ GLC+ ++++L+ EF G +P A T+ T++N + R
Sbjct: 217 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVK-QRDF 275
Query: 285 QGLE-ILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
G+E +L M+ G ++ Y ++ VK G++ +A+++ ++M G+E D+ Y ++
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
I R+G + A L D++ ++G YT+ +I G+CK + A ++ M S G
Sbjct: 336 ISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFT------------------- 440
V N ++DG + G +D A ++ ME + D FT
Sbjct: 396 NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQ 455
Query: 441 ----------------YTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLI 484
YT L+ C+ A + V G Q T +I
Sbjct: 456 WLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC 515
Query: 485 SDGLKNEAKKVR 496
G EA+K+R
Sbjct: 516 KQGKIKEARKLR 527
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 36/208 (17%)
Query: 35 QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTF 94
+R +K FR+M G LST I CK +++A+ + ++ GV P+ +T+
Sbjct: 448 KRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITY 507
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
N +I AYC+ ++ M+ G+ PD +Y SL+ G
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC----------------- 550
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVH 214
I +V DEA R+F ++ L D ++ TY VMI+GL K G
Sbjct: 551 --IADNV----------------DEAMRLFSEMGLKG-LDQNSVTYTVMISGLSKAGKSD 591
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGL 242
A ++ ++R+G+ + Y ALI +
Sbjct: 592 EAFGLYDEMKRKGYTIDNKVYTALIGSM 619
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 224/446 (50%), Gaps = 5/446 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI I +C+ QL A +L +KLG P +VT N+L++ +C ++++M E
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G PD +++ +L+ G + + + ++M+ +PD+ +Y +++ + G PD
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + + + + Y+ +I+ LCK +V +AL++F + +G P+V TY++LI
Sbjct: 224 ALNLLNK-MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ LC R ++A RLLS+ E PN +TF ++++ + G+L + ++ EM +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ Y +++ R+ EA +I M+S PD+ +YNT+I + + +V + +EL
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+ + G + T+T +IHG +A + A M S G N++ N +LDGL K
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 420 AGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKAT 475
G +++A+ FE ++ D +TY I+ +C+A + + G +
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 476 RRAVIDGLISDGLKNEAKKVRLKIRK 501
+I G GLK EA + +K+++
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKE 548
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 231/481 (48%), Gaps = 41/481 (8%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
++M G S LN + C ++ +A ++ V++G PD VTF TL+ +
Sbjct: 125 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 184
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM----IESE----- 156
++ERM G PD+++Y ++++G ++G + L++ +KM IE++
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 157 --------------------------IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLS 190
IRPDV++Y+ L+ C G +A+R+ D +L
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD-MLE 303
Query: 191 AETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANE 250
+ +P+ T+N +I+ K G + A +F + +R P ++TYN+LING C R +E
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 251 ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVA 310
A+++ + P+ +T+ T++N + ++ G+E+ +M +G + Y T++
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
+ A + +QM+S+GV P++ +YNT++ + G++++A+ + + ++K
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
D YT+ I+ G+CKA ++ + ++ G +++A N ++ G K G + A F
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Query: 431 EGME----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISD 486
M+ + DS TY L+ R +++ + C F +T V D ++ D
Sbjct: 544 IKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHD 602
Query: 487 G 487
G
Sbjct: 603 G 603
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 188/365 (51%), Gaps = 2/365 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I S+CK + +D A + + G+ PDV T+++LI C + + +L M E +
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P+V+++NSL+ ++G +FD+MI+ I P++ +YN L++ + DEA +
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+F +++S + P TYN +ING CK V + + +FR++ RRG V +TY LI+G
Sbjct: 367 IFT-LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
+A + A+ + + G PN +T+ T+++ + G+LE+ + + ++ D
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
+ Y + + K G+V + ++ + GV+PD+ +YNTMI + ++G +EA L +
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
++++GP D T+ +I + + + + M S F + V D L G
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGR 604
Query: 423 IDRAL 427
+D+
Sbjct: 605 LDKGF 609
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 205/438 (46%), Gaps = 38/438 (8%)
Query: 105 VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY 164
+ D ++ M ++ P ++ ++ L+S + F + + +KM + ++++Y
Sbjct: 44 LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 165 NILMHCYFR----------------LGM-PD------------EANRVFKDVLLSAET-- 193
NI+++C R LG P NR+ + V L +
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 194 ---DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANE 250
P T T+ +++GL ++ A+++ + +G P+++TY A+INGLCK +
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 251 ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVA 310
A LL++ + E + + ++TV++ + ++ L + TEM +KG D F Y ++++
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
L GR +A + M+ + P++ ++N++I + ++G++ EA +L D++ +
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
+ T+ +I+G C RL+EA Q M S ++V N +++G KA + ++ F
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 431 EGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISD 486
M R ++ TYT L+H +A A + G T ++DGL +
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 487 GLKNEAKKVRLKIRKAQL 504
G +A V ++K+++
Sbjct: 464 GKLEKAMVVFEYLQKSKM 481
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 161/336 (47%), Gaps = 9/336 (2%)
Query: 127 ISYNSLMSGAVRKGLFPMTLH----MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
+SY+ R L + L +F +M++S P + ++ L+ ++ D
Sbjct: 27 LSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS 86
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
F + + + TYN+MIN LC+ + AL++ + + G+ P ++T N+L+NG
Sbjct: 87 -FGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGF 145
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
C R +EA L+ + E G++P+ +TFTT+++ F+ + + + ++ M KG D
Sbjct: 146 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 205
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
Y V+ L K G A + +M +E D+ Y+T+I + VD+AL L +
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
++ +G D +T++ +I LC R ++A + L M N+V N ++D K G
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 423 IDRALKFFEGMEVR----DSFTYTILVHNLCRARRF 454
+ A K F+ M R + TY L++ C R
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 222/472 (47%), Gaps = 51/472 (10%)
Query: 45 FRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRF 104
F M K + + NI I +C+A +LD A + K G+ P+V T N ++D C+
Sbjct: 366 FEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 105 VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIR------ 158
D C + E M TPD I++ SL+ G + G +++KM++S+ R
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485
Query: 159 -----------------------------PDVWSYNILMHCYFRLGMPDEANRVFKDVLL 189
PD+ N M C F+ G P++ +F+++
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK- 544
Query: 190 SAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRAN 249
+ P +Y+++I+GL K G+ + +F +++ +G V + YN +I+G CK + N
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 250 EARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVV 309
+A +LL E + G EP +T+ +V++ + RL++ + E +SK + Y +++
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 310 AALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPG 369
K GR+ EA I E++M G+ P+L ++N+++ + ++EAL +++
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724
Query: 370 NDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKF 429
+Q T+ I+I+GLCK ++ N+A M G + ++ ++ GL KAG+I A
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784
Query: 430 FEGME----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRR 477
F+ + V DS Y ++ L R + A F + + TRR
Sbjct: 785 FDRFKANGGVPDSACYNAMIEGLSNGNRAMDA-----------FSLFEETRR 825
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 192/387 (49%), Gaps = 3/387 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N+CI S K ++D A + G+ PD VT+ ++I C+ D E+ E +++
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
P +YN+++ G G F + ++ P V +YN ++ C ++G DE
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A +VF++ + + P+ +TYN++I+ LC+ G + A + ++Q+ G P V T N ++
Sbjct: 362 ALKVFEE--MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ LCK+++ +EA + E P+ ITF ++++ + GR++ ++ +M
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ Y +++ GR + +I + M++ PDL NT + F+ G ++ +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
++I+ D +++I+IHGL KA NE + M G + A N V+DG K
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 420 AGHIDRALKFFEGMEVRDSFTYTILVH 446
G +++A + E M+ + F T++ +
Sbjct: 600 CGKVNKAYQLLEEMKTK-GFEPTVVTY 625
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 213/434 (49%), Gaps = 6/434 (1%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I +CKA +LD+A + K +P +NT+I Y FD +LER + G
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P VI+YN +++ + G L +F++M + + P++ +YNIL+ R G D A
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+ +D + A P+ T N+M++ LCK+ + A +MF + + P+ +T+ +LI+GL
Sbjct: 399 L-RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
K R ++A ++ + ++ N+I +T+++ F GR E G +I +M ++ + D
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
T + + K G + + E++ + PD SY+ +I+ + G +E EL
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
++++G D + I+I G CK ++N+A Q L+ M + GF +V V+DGL K
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 423 IDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRA 478
+D A FE + + + Y+ L+ + R A L +Q G T +
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 479 VIDGLISDGLKNEA 492
++D L+ NEA
Sbjct: 698 LLDALVKAEEINEA 711
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 179/397 (45%), Gaps = 44/397 (11%)
Query: 59 LNICIASM---CKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLE 115
+N CI + KA +L + V+ K P + TLI A+ D + +
Sbjct: 133 VNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQ 192
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
+M+E G P V + +L+ G ++G L + D+M S + D+ YN+ + + ++G
Sbjct: 193 QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVG 252
Query: 176 MPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTY 235
D A + F ++ + P TY MI LCK + A+ MF +L++ VP Y
Sbjct: 253 KVDMAWKFFHEIEANG-LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
N +I G A + +EA LL R G P+ I + ++ C + G++++ L++ EM+
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDE 355
P+L++YN +I + R G++D
Sbjct: 372 DA------------------------------------APNLSTYNILIDMLCRAGKLDT 395
Query: 356 ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD 415
A EL D ++K G + T I++ LCK+++L+EA + M+ + + ++D
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 416 GLGKAGHIDRALKFFEGMEVRD----SFTYTILVHNL 448
GLGK G +D A K +E M D S YT L+ N
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 144/296 (48%), Gaps = 6/296 (2%)
Query: 163 SYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRN 222
SYN L+ R D +++ ++ + A PS T M+ G K + + +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSV-AGFGPSVNTCIEMVLGCVKANKLREGYDVVQM 158
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
+++ F P Y LI ++ L + +E G+EP FTT++ + GR
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
++ L +L EM+S D Y + + K G+V A + ++ +NG++PD +Y +
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 343 MIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
MI + + R+DEA+E+ + +EK Y + +I G A + +EA L+ + G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 403 FGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSF----TYTILVHNLCRARRF 454
+++A NC+L L K G +D ALK FE M+ +D+ TY IL+ LCRA +
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKL 393
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 119/248 (47%), Gaps = 1/248 (0%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
+G L T+ NI I CK +++KA +L + G P VVT+ ++ID + D
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
+ E K + +V+ Y+SL+ G + G + +++++ + P+++++N L+
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
+ +EA F+ + + P+ TY ++INGLCK + A ++ +Q++G
Sbjct: 701 ALVKAEEINEALVCFQS-MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P ++Y +I+GL KA EA L F+ G P++ + ++ R +
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Query: 290 LTEMRSKG 297
E R +G
Sbjct: 820 FEETRRRG 827
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 1/235 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I + K +LD+A + + + +VV +++LID + + D +LE + + GL
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
TP++ ++NSL+ V+ L F M E + P+ +Y IL++ ++ ++A
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA-F 747
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
VF + PST +Y MI+GL K G + A ++F + G VP+ YNA+I GL
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
RA +A L E R G + T +++ + LEQ + +R G
Sbjct: 808 SNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 1/205 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I K ++D+A +L + ++ G+ P++ T+N+L+DA + + + MKE
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
TP+ ++Y L++G + F + +M + ++P SY ++ + G EA
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+F D + P +A YN MI GL +A S+F +RRG T L++ L
Sbjct: 784 LF-DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Query: 243 CKARRANEARRLLSEFREAGHEPNA 267
K +A + + RE G +A
Sbjct: 843 HKNDCLEQAAIVGAVLRETGKARHA 867
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 214/459 (46%), Gaps = 6/459 (1%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
+++ G SL N + +CK + + E +L +K GVLP++ T+N I C+
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
D ++ + E G PDVI+YN+L+ G + F KM+ + PD ++YN
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
L+ Y + GM A R+ D + + P TY +I+GLC G + AL++F
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFV-PDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQ 285
+G P V+ YN LI GL EA +L +E E G P TF ++N + G +
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 286 GLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIY 345
++ M SKGY D F + ++ ++ A EI + M+ NGV+PD+ +YN+++
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 346 LYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGF 405
+ + ++ +E + ++G + +T I++ LC+ ++L+EA+ L+ M +
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 406 NLVASNCVLDGLGKAGHIDRALKFFEGME-----VRDSFTYTILVHNLCRARRFLCASKH 460
+ V ++DG K G +D A F ME + TY I++H A K
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 461 LVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKI 499
+ T R ++DG G N K L++
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM 663
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 179/386 (46%), Gaps = 3/386 (0%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMV-KGRSLSTKFLNICIASMCKAKQLDKAECV 78
P ++ + N I V MV +G + N IA CK + AE +
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
+ D V G +PD T+ +LID C + + G+ P+VI YN+L+ G
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
+G+ + ++M E + P+V ++NIL++ ++G +A+ + K V++S P
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK-VMISKGYFPDIF 462
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
T+N++I+G + NAL + + G P+V TYN+L+NGLCK + +
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
E G PN TF ++ R +L++ L +L EM++K D + T++ K G +
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Query: 319 VEADEIAEQMM-SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI 377
A + +M + V +YN +I+ + + V A +L ++ G D YT+ +
Sbjct: 583 DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRL 642
Query: 378 IIHGLCKAKRLNEAVQHLDHMNSLGF 403
++ G CK +N + L M GF
Sbjct: 643 MVDGFCKTGNVNLGYKFLLEMMENGF 668
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 194/399 (48%), Gaps = 5/399 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N ++ + + D+A V + G+ PDV +F + ++C+ A +L M
Sbjct: 115 NAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSS 174
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G +V++Y +++ G + +F KM+ S + + ++N L+ + G E
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKE 234
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
++ D ++ P+ TYN+ I GLC+ G + A+ M L +G P+V+TYN LI
Sbjct: 235 CEKLL-DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI 293
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
GLCK + EA L + G EP++ T+ T++ + G ++ I+ + G+
Sbjct: 294 YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFV 353
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D F Y +++ L G A + + + G++P++ YNT+I QG + EA +L
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+++ ++G + T I+++GLCK +++A + M S G+ ++ N ++ G
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 420 AGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRF 454
++ AL+ + M D +TY L++ LC+ +F
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 187/443 (42%), Gaps = 48/443 (10%)
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
+++GV +G + + Y R V ERM P V SYN++MS V
Sbjct: 74 MLEGVYVGAMKN----------YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 123
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV----------- 187
G F ++ +M + I PDV+S+ I M + + P A R+ ++
Sbjct: 124 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183
Query: 188 -----------------------LLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ 224
+L++ +T+N ++ LCK G V + +
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 225 RRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLE 284
+RG +P + TYN I GLC+ + A R++ E G +P+ IT+ ++ + + +
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 285 QGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
+ L +M ++G D + Y T++A K G V A+ I + NG PD +Y ++I
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 345 YLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFG 404
+G + AL L ++ +G + + +I GL + EA Q + M+ G
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Query: 405 FNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKH 460
+ N +++GL K G + A + M + D FT+ IL+H + A +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 461 LVACLQCGFQVLKATRRAVIDGL 483
L L G T ++++GL
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGL 506
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 161/343 (46%), Gaps = 7/343 (2%)
Query: 168 MHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRG 227
M Y R G EA VF+ + + +P+ +YN +++ L +GY A ++ ++ RG
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFY-DCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 228 FVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGL 287
P+V ++ + CK R + A RLL+ G E N + + TV+ + +G
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 288 EILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLY 347
E+ +M + G + + ++ L K G V E +++ ++++ GV P+L +YN I
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 348 FRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNL 407
++G +D A+ +V + ++GP D T+ +I+GLCK + EA +L M + G +
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 408 VASNCVLDGLGKAGHIDRALKF-----FEGMEVRDSFTYTILVHNLCRARRFLCASKHLV 462
N ++ G K G + A + F G V D FTY L+ LC A
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGF-VPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 463 ACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQLL 505
L G + +I GL + G+ EA ++ ++ + L+
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 44 TFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
TF I++ G S K N + LD V++D GV PDV T+N+L++ C+
Sbjct: 463 TFNILIHGYSTQLKMEN-------ALEILD----VMLDN---GVDPDVYTYNSLLNGLCK 508
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
F+ E + M E G P++ ++N L+ R L + ++M + PD +
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
+ L+ + + G D A +F+ + + + ST TYN++I+ + V A +F+ +
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
R P+ TY +++G CK N + L E E G P+ T V+NC R+
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRV 688
Query: 284 EQGLEILTEMRSKG 297
+ I+ M KG
Sbjct: 689 YEAAGIIHRMVQKG 702
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 2/210 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + +CK + + V+ G P++ TFN L+++ CR+ D +LE MK
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES-EIRPDVWSYNILMHCYFRLGMPD 178
+ PD +++ +L+ G + G +F KM E+ ++ +YNI++H +
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVT 619
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
A ++F++ ++ P TY +M++G CK G V+ + GF+P + T +
Sbjct: 620 MAEKLFQE-MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRV 678
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAI 268
IN LC R EA ++ + G P A+
Sbjct: 679 INCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 9/232 (3%)
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK--GYTFDGFAYCTVVAALVKTG 316
+E G + T+ +V+ G+ E E+L +MR + +G Y + + G
Sbjct: 32 KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEG-VYVGAMKNYGRKG 90
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHT 376
+V EA + E+M EP + SYN ++ + G D+A ++ ++ G D Y+ T
Sbjct: 91 KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150
Query: 377 IIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR 436
I + CK R + A++ L++M+S G N+VA V+ G + + F M
Sbjct: 151 IRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS 210
Query: 437 DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGL 488
++ + + R LC + C + +V+K R V+ L + L
Sbjct: 211 GV---SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK---RGVLPNLFTYNL 256
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 218/408 (53%), Gaps = 5/408 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI I C+ +L A +L +KLG PD+VT N+L++ +C ++++M E
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G PD +++ +L+ G + + D+M++ +PD+ +Y +++ + G D
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + + +A+ + + Y+ +I+ LCK + +AL++F ++ +G P V+TY++LI
Sbjct: 237 ALNLLNK-MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ LC R ++A RLLS+ E PN +TF+ +++ + G+L + ++ EM +
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ F Y +++ R+ EA ++ E M+ P++ +YNT+I + + RVD+ +EL
Sbjct: 356 PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
++ + G + T+T +IHG +A+ + A M S+G N++ N +LDGL K
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 475
Query: 420 AGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVA 463
G + +A+ FE ++ D +TY I++ +C+A ++ + VA
Sbjct: 476 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVA 523
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 138/323 (42%), Gaps = 40/323 (12%)
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
D+A +F V+ + PS ++ +++ + K +S ++ G + TYN
Sbjct: 60 DDAIGLF-GVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 238 LI-----------------------------------NGLCKARRANEARRLLSEFREAG 262
LI NG C R ++A L+ + E G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
++P+ +TFTT+++ F + + + ++ M +G D Y VV L K G A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+ +M + +E ++ Y+T+I + D+AL L ++E +G + T++ +I L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DS 438
C R ++A + L M NLV + ++D K G + +A K +E M R +
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 439 FTYTILVHNLCRARRFLCASKHL 461
FTY+ L++ C R A + L
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQML 381
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 225/448 (50%), Gaps = 5/448 (1%)
Query: 49 VKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFD 108
+KG + + L+I I C+ ++L A + +KLG PD VTF+TLI+ C
Sbjct: 100 LKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVS 159
Query: 109 AGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILM 168
E+++RM E G P +I+ N+L++G G + + D+M+E+ +P+ +Y ++
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVL 219
Query: 169 HCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF 228
+ G A + + + + Y+++I+GLCK+G + NA ++F ++ +GF
Sbjct: 220 KVMCKSGQTALAMELLRK-MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 229 VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLE 288
+++ Y LI G C A R ++ +LL + + P+ + F+ +++C + G+L + E
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 289 ILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYF 348
+ EM +G + D Y +++ K ++ +A+ + + M+S G P++ ++N +I Y
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 349 RQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLV 408
+ +D+ LEL ++ G D T+ +I G C+ +L A + M S ++V
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 409 ASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVAC 464
+ +LDGL G ++AL+ FE +E D Y I++H +C A + A +
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 465 LQCGFQVLKATRRAVIDGLISDGLKNEA 492
G + T +I GL G +EA
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 220/459 (47%), Gaps = 6/459 (1%)
Query: 33 LTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVV 92
L R++ + + R++ G + LN + +C ++ A ++ V+ G P+ V
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
T+ ++ C+ E+L +M+E + D + Y+ ++ G + G ++F++M
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
+ D+ Y L+ + G D+ ++ +D ++ + P ++ +I+ K G
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD-MIKRKITPDVVAFSALIDCFVKEGK 332
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
+ A + + + +RG P+ +TY +LI+G CK + ++A +L G PN TF
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
++N + ++ GLE+ +M +G D Y T++ + G++ A E+ ++M+S
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
V PD+ SY ++ G ++ALE+ ++IEK D + IIIHG+C A ++++A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNL 448
+ G ++ N ++ GL K G + A F ME + TY IL+
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 449 CRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
++K + +CGF V +T + V+D ++SDG
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD-MLSDG 610
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 203/420 (48%), Gaps = 5/420 (1%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
P ++ F+ L R +D ++ ++M+ G+ ++ + + +++ R +
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
K+I+ PD +++ L++ G EA + D ++ P+ T N ++NGLC
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV-DRMVEMGHKPTLITLNALVNGLC 188
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
NG V +A+ + + GF P +TY ++ +CK+ + A LL + E + +A+
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
++ +++ + G L+ + EM KG+ D Y T++ GR + ++ M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
+ + PD+ +++ +I + ++G++ EA EL ++ + G D T+T +I G CK +L
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTIL 444
++A LD M S G G N+ N +++G KA ID L+ F M +R D+ TY L
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 445 VHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQL 504
+ C + A + + + + + ++DGL +G +A ++ KI K+++
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 138/285 (48%), Gaps = 4/285 (1%)
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
+A+ +F+ + R P ++ ++ L + + + ++ + L + G N T + ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 275 NCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
NCC RC +L + ++ GY D + T++ L GRV EA E+ ++M+ G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 335 PDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQH 394
P L + N ++ G+V +A+ L+D++ + G ++ T+ ++ +CK+ + A++
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 395 LDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCR 450
L M + V + ++DGL K G +D A F ME++ D YT L+ C
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 451 ARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
A R+ +K L ++ A+ID + +G EA+++
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 117/298 (39%), Gaps = 51/298 (17%)
Query: 2 NLSAAPALHFNAAYPFTHPAILNHENPITSFLTQRITHSKNVTFRIMV-KGRSLSTKFLN 60
L A LH P + + + I F + N +MV KG + + N
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 61 ICIASMCKAKQLDKAECVLIDGVKL-------GVLPDVVTFNTLIDAYCRFVSFDAGCEV 113
I I CKA +D DG++L GV+ D VT+NTLI +C + E+
Sbjct: 392 ILINGYCKANLID-------DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 114 LERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE----------------- 156
+ M + PD++SY L+ G G L +F+K+ +S+
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 157 ------------------IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
++PDV +YNI++ + G EA+ +F+ + + P+
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS-PNGC 563
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
TYN++I G + + ++R GF + T +++ L R +LS
Sbjct: 564 TYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDMLS 621
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 213/398 (53%), Gaps = 5/398 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
+I I C+ QL A VL +KLG P++VT ++L++ YC ++++M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G P+ +++N+L+ G + + D+M+ +PD+ +Y ++++ + G D
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + + + + +P YN +I+GLCK ++ +AL++F+ ++ +G P V+TY++LI
Sbjct: 240 AFNLL-NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ LC R ++A RLLS+ E P+ TF+ +++ + G+L + ++ EM +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
Y +++ R+ EA ++ E M+S PD+ +YNT+I + + RV+E +E+
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
++ + G + T+ I+I GL +A + A + M S G N++ N +LDGL K
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 420 AGHIDRALKFFEGMEVRDS----FTYTILVHNLCRARR 453
G +++A+ FE ++ +TY I++ +C+A +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 208/412 (50%), Gaps = 8/412 (1%)
Query: 45 FRIMVKGRSLSTKF-LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
F MVK R + + ++++ K + D + LG+ + T++ LI+ +CR
Sbjct: 69 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 128
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
VL +M + G P++++ +SL++G + + D+M + +P+ +
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
+N L+H F EA + D +++ P TY V++NGLCK G A ++ +
Sbjct: 189 FNTLIHGLFLHNKASEAMALI-DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
++ P VL YN +I+GLCK + ++A L E G PN +T++++++C GR
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
+L++M + D F + ++ A VK G++VEA+++ ++M+ ++P + +Y+++
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
I + R+DEA ++ + + + D T+ +I G CK KR+ E ++ M+ G
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS-----FTYTILVHNLCR 450
N V N ++ GL +AG D A + F+ M V D TY L+ LC+
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEM-VSDGVPPNIMTYNTLLDGLCK 478
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 221/420 (52%), Gaps = 3/420 (0%)
Query: 34 TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVT 93
++RI+ + + ++ V G +T N I + + +A ++ V G PD+VT
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
+ +++ C+ D +L +M++ L P V+ YN+++ G + L++F +M
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
IRP+V +Y+ L+ C G +A+R+ D ++ + +P T++ +I+ K G +
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD-MIERKINPDVFTFSALIDAFVKEGKL 342
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH-EPNAITFTT 272
A ++ + +R P ++TY++LING C R +EA+++ EF + H P+ +T+ T
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF-EFMVSKHCFPDVVTYNT 401
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
++ + R+E+G+E+ EM +G + Y ++ L + G A EI ++M+S+G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
V P++ +YNT++ + G++++A+ + + +++ YT+ I+I G+CKA ++ +
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRAR 452
+++ G ++VA N ++ G + G + A F+ M+ + + + L RAR
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 183/372 (49%), Gaps = 3/372 (0%)
Query: 32 FLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVL-PD 90
FL + + + + R++ KG + + +CK D A L++ ++ G L P
Sbjct: 197 FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA-FNLLNKMEQGKLEPG 255
Query: 91 VVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFD 150
V+ +NT+ID C++ D + + M+ G+ P+V++Y+SL+S G + +
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 151 KMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKN 210
MIE +I PDV++++ L+ + + G EA +++ D ++ DPS TY+ +ING C +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY-DEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
+ A MF + + P+V+TYN LI G CK +R E + E + G N +T+
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 271 TTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS 330
++ F+ G + EI EM S G + Y T++ L K G++ +A + E +
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 331 NGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
+ +EP + +YN MI + G+V++ +L + +G D + +I G C+ E
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 391 AVQHLDHMNSLG 402
A M G
Sbjct: 555 ADALFKEMKEDG 566
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 176/345 (51%), Gaps = 1/345 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I +CK K +D A + + G+ P+VVT+++LI C + + +L M E
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
+ PDV ++++L+ V++G ++D+M++ I P + +Y+ L++ + DE
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A ++F + ++S P TYN +I G CK V + +FR + +RG V +TYN LI
Sbjct: 380 AKQMF-EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
GL +A + A+ + E G PN +T+ T+++ + G+LE+ + + ++
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ Y ++ + K G+V + ++ + GV+PD+ +YNTMI + R+G +EA L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFG 404
+++++G + + +I + + + + M S GF
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 147/297 (49%), Gaps = 8/297 (2%)
Query: 207 LCKNGY----VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
L +NG + +A+++F + + P ++ ++ L++ + K + + L + + G
Sbjct: 52 LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
N T++ ++NC R +L L +L +M GY + +++ + R+ EA
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+ +QM G +P+ ++NT+I+ F + EA+ L+D++ +G D T+ ++++GL
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DS 438
CK + A L+ M ++ N ++DGL K H+D AL F+ ME + +
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 439 FTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
TY+ L+ LC R+ AS+ L ++ T A+ID + +G EA+K+
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 2/228 (0%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMV-KGRSLSTKFLNICIASMCKAKQLDKAECV 78
P ++ + I F + FR M +G +T NI I + +A D A+ +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
+ V GV P+++T+NTL+D C+ + V E ++ + + P + +YN ++ G +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
G +F + ++PDV +YN ++ + R G +EA+ +FK+ + T P++
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE-MKEDGTLPNSG 572
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKAR 246
YN +I ++G + + + ++ GF + T + N L R
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 620
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 216/422 (51%), Gaps = 6/422 (1%)
Query: 85 LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
LG+ ++ T++ I+ +CR +L +M + G P +++ NSL++G
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
+ + D+M+E +PD ++ L+H F+ EA + + +++ P TY +I
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVI 222
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
NGLCK G AL++ +++ +V+ YN +I+GLCK + ++A L ++ G +
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
P+ T+ +++C GR +L++M K D + ++ A VK G++VEA+++
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 325 AEQMM-SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
++M+ S PD+ +YNT+I + + RV+E +E+ ++ + G + T+T +IHG
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 384 KAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS----F 439
+A+ + A M S G +++ N +LDGL G+++ AL FE M+ RD
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 440 TYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKI 499
TYT ++ LC+A + + G + T ++ G GLK EA + +++
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Query: 500 RK 501
++
Sbjct: 523 KE 524
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 197/396 (49%), Gaps = 6/396 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
+I I C+ QL A +L +KLG P +VT N+L++ +C ++++M E
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G PD +++ +L+ G + + + ++M+ +PD+ +Y +++ + G PD
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + + + + + YN +I+GLCK ++ +A +F ++ +G P+V TYN LI
Sbjct: 234 ALNLL-NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ LC R ++A RLLS+ E P+ + F +++ + G+L + ++ EM +
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 300 F-DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
F D AY T++ K RV E E+ +M G+ + +Y T+I+ +F+ D A
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
+ Q+ +G D T+ I++ GLC + A+ ++M ++V +++ L
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 419 KAGHIDRALKFFEGMEVR----DSFTYTILVHNLCR 450
KAG ++ F + ++ + TYT ++ CR
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 184/376 (48%), Gaps = 6/376 (1%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
R++VKG I +CK + D A +L K + DVV +NT+ID C++
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
D ++ +M+ G+ PDV +YN L+S G + + M+E I PD+ +N
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
L+ + + G EA +++ +++ S P YN +I G CK V + +FR + +
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQ 285
RG V +TY LI+G +AR + A+ + + G P+ +T+ +++ G +E
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 286 GLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIY 345
L + M+ + D Y T++ AL K G+V + ++ + GV+P++ +Y TM+
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Query: 346 LYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFG- 404
+ R+G +EA L +++++GP + T+ +I + + + + M S GF
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAG 564
Query: 405 ----FNLVASNCVLDG 416
F LV +N + DG
Sbjct: 565 DASTFGLV-TNMLHDG 579
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 129/296 (43%), Gaps = 39/296 (13%)
Query: 247 RANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYC 306
+ ++A L + ++ P+ + F+ +++ + + + + + +M++ G + + + Y
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 307 TVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE 366
+ + ++ A I +MM G P + + N+++ + R+ EA+ LVDQ+ +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 367 GPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG----------------------FG 404
G D T T ++HGL + + +EAV ++ M G
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 405 FNL-------------VASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHN 447
NL V N ++DGL K H+D A F ME + D FTY L+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 448 LCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQ 503
LC R+ AS+ L L+ A+ID + +G EA+K+ ++ K++
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 106/238 (44%), Gaps = 2/238 (0%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMV-KGRSLSTKFLNICIASMCKAKQLDKAECV 78
P ++ + I F + FR M +G +T I +A+ D A+ V
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
V GV PD++T+N L+D C + + V E M++ + D+++Y +++ +
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
G +F + ++P+V +Y +M + R G+ +EA+ +F ++ P++
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL-PNSG 532
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
TYN +I ++G + + + ++ GF + T+ + N L R +LS
Sbjct: 533 TYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDMLS 590
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 218/437 (49%), Gaps = 5/437 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI I C+ QL A VL +KLG PD+VT ++L++ YC ++++M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
P+ +++N+L+ G + + D+M+ +PD+++Y +++ + G D
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + K + + + Y +I+ LC V++AL++F + +G P V+TYN+LI
Sbjct: 239 ALSLLKK-MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
LC R ++A RLLS+ E PN +TF+ +++ + G+L + ++ EM +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D F Y +++ R+ EA + E M+S P++ +YNT+I + + RV+E +EL
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
++ + G + T+ +I GL +A + A + M S G +++ + +LDGL K
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 420 AGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKAT 475
G +++AL FE ++ D +TY I++ +C+A + + G +
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Query: 476 RRAVIDGLISDGLKNEA 492
+I G GLK EA
Sbjct: 538 YTTMISGFCRKGLKEEA 554
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 208/411 (50%), Gaps = 6/411 (1%)
Query: 45 FRIMVKGRSL-STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
F MV+ R L S N ++++ K + D + L + D+ ++N LI+ +CR
Sbjct: 68 FGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCR 127
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
VL +M + G PD+++ +SL++G + + D+M E +P+ +
Sbjct: 128 RSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVT 187
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
+N L+H F EA + D +++ P TY ++NGLCK G + ALS+ + +
Sbjct: 188 FNTLIHGLFLHNKASEAVALI-DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
++ +V+ Y +I+ LC + N+A L +E G PN +T+ +++ C GR
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
+L++M + + + ++ A VK G++VEA+++ ++M+ ++PD+ +Y+++
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
I + R+DEA + + + + + T+ +I G CKAKR+ E ++ M+ G
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCR 450
N V N ++ GL +AG D A K F+ M D TY+IL+ LC+
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 228/457 (49%), Gaps = 6/457 (1%)
Query: 35 QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTF 94
+RI+ + + ++ V +T N I + + +A ++ V G PD+ T+
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
T+++ C+ D +L++M++ + DV+ Y +++ L++F +M
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVH 214
IRP+V +YN L+ C G +A+R+ D ++ + +P+ T++ +I+ K G +
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD-MIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
A ++ + +R P++ TY++LING C R +EA+ + PN +T+ T++
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 275 NCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
+ R+E+G+E+ EM +G + Y T++ L + G A +I ++M+S+GV
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 335 PDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQH 394
PD+ +Y+ ++ + G++++AL + + ++K D YT+ I+I G+CKA ++ +
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 395 LDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCR 450
++ G N++ ++ G + G + A F M+ + +S TY L+ R
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Query: 451 ARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
+++ + CGF V A+ +++ ++ DG
Sbjct: 583 DGDKAASAELIKEMRSCGF-VGDASTISMVINMLHDG 618
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 113/238 (47%), Gaps = 2/238 (0%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMV-KGRSLSTKFLNICIASMCKAKQLDKAECV 78
P ++ + I F + FR M +G +T N I + +A D A+ +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
V GV PD++T++ L+D C++ + V E ++++ + PD+ +YN ++ G +
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
G +F + ++P+V Y ++ + R G+ +EA+ +F++ + T P++
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE-MKEDGTLPNSG 571
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
TYN +I ++G + + + ++ GFV + T + +IN L R +LS
Sbjct: 572 TYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 629
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 206/407 (50%), Gaps = 6/407 (1%)
Query: 48 MVKGRSLSTKF-LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVS 106
MVK R L + F N ++++ K K+ D + +LG+ ++ T+N LI+ +CR
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 107 FDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNI 166
+L +M + G P +++ +SL++G + + D+M+E RPD ++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
L+H F EA + D ++ P+ TY V++NGLCK G + A ++ ++
Sbjct: 121 LIHGLFLHNKASEAVALV-DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
+V+ +N +I+ LCK R ++A L E G PN +T++++++C GR
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
++L++M K + + ++ A VK G+ VEA+++ + M+ ++PD+ +YN++I
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFN 406
+ R+D+A ++ + + + D T+ +I G CK+KR+ + + M+ G +
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 407 LVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLC 449
V ++ GL G D A K F+ M D TY+IL+ LC
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 229/446 (51%), Gaps = 5/446 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI I C+ Q+ A +L +KLG P +VT ++L++ YC ++++M E
Sbjct: 49 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 108
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G PD I++ +L+ G + + D+M++ +P++ +Y ++++ + G D
Sbjct: 109 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 168
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + + + +A+ + +N +I+ LCK +V +AL++F+ ++ +G P V+TY++LI
Sbjct: 169 AFNLL-NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ LC R ++A +LLS+ E PN +TF +++ + G+ + ++ +M +
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D F Y +++ R+ +A ++ E M+S PDL +YNT+I + + RV++ EL
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
++ G D T+T +I GL + A + M S G +++ + +LDGL
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 420 AGHIDRALKFFEGM---EVR-DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKAT 475
G +++AL+ F+ M E++ D + YT ++ +C+A + + G + T
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 476 RRAVIDGLISDGLKNEAKKVRLKIRK 501
+I GL S L EA + K+++
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKE 493
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 174/324 (53%), Gaps = 1/324 (0%)
Query: 58 FLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM 117
N I S+CK + +D A + + G+ P+VVT+++LI C + + ++L M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
E + P+++++N+L+ V++G F + D MI+ I PD+++YN L++ +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
D+A ++F + ++S + P TYN +I G CK+ V + +FR + RG V + +TY
Sbjct: 307 DKAKQMF-EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LI GL + A+++ + G P+ +T++ +++ G+LE+ LE+ M+
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
D + Y T++ + K G+V + ++ + GV+P++ +YNTMI + + EA
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHG 381
L+ +++++GP D T+ +I
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 181/371 (48%), Gaps = 1/371 (0%)
Query: 32 FLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDV 91
FL + + + + R++ +G + + + +CK +D A +L + DV
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
V FNT+ID+ C++ D + + M+ G+ P+V++Y+SL+S G + +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
MIE +I P++ ++N L+ + + G EA ++ D ++ DP TYN +ING C +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD-MIKRSIDPDIFTYNSLINGFCMHD 304
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
+ A MF + + P++ TYN LI G CK++R + L E G + +T+T
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
T++ F G + ++ +M S G D Y ++ L G++ +A E+ + M +
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
++ D+ Y TMI + G+VD+ +L + +G + T+ +I GLC + L EA
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 392 VQHLDHMNSLG 402
L M G
Sbjct: 485 YALLKKMKEDG 495
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 225/481 (46%), Gaps = 41/481 (8%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
++M G S L+ + C K++ A ++ V++G PD +TF TLI
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM----IESE----- 156
+++RM + G P++++Y +++G ++G + ++ +KM IE++
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 157 --------------------------IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLS 190
IRP+V +Y+ L+ C G +A+++ D ++
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD-MIE 248
Query: 191 AETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANE 250
+ +P+ T+N +I+ K G A + ++ +R P++ TYN+LING C R ++
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 251 ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVA 310
A+++ P+ T+ T++ + R+E G E+ EM +G D Y T++
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
L G A ++ +QM+S+GV PD+ +Y+ ++ G++++ALE+ D ++K
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
D Y +T +I G+CKA ++++ ++ G N+V N ++ GL + A
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 431 EGME----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISD 486
+ M+ + DS TY L+ R +++ + C F V A+ ++ ++ D
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF-VGDASTIGLVANMLHD 547
Query: 487 G 487
G
Sbjct: 548 G 548
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 129/259 (49%), Gaps = 2/259 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I C +LDKA+ + V PD+ T+NTLI +C+ + G E+ M
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GL D ++Y +L+ G G +F +M+ + PD+ +Y+IL+ G ++
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A VF D + +E Y MI G+CK G V + +F +L +G P V+TYN +I
Sbjct: 414 ALEVF-DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+GLC R EA LL + +E G P++ T+ T++ R G E++ EMRS +
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 532
Query: 300 FDGFAYCTVVAALVKTGRV 318
D + +VA ++ GR+
Sbjct: 533 GDA-STIGLVANMLHDGRL 550
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 143/299 (47%), Gaps = 2/299 (0%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N I + K + +AE + D +K + PD+ T+N+LI+ +C D ++ E M
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
PD+ +YN+L+ G + +F +M + D +Y L+ F G D
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
A +VFK ++S P TY+++++GLC NG + AL +F +Q+ ++ Y +
Sbjct: 378 NAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I G+CKA + ++ L G +PN +T+ T+++ L++ +L +M+ G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
D Y T++ A ++ G + E+ +M S D AS ++ GR+D++
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD-ASTIGLVANMLHDGRLDKSF 554
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 213/431 (49%), Gaps = 5/431 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + + +AKQ K E + GV P++ T+N LI C+ F+ L+ M +
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK 177
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G PDV SY+++++ + G L +FD+M E + PDV YNIL+ + +
Sbjct: 178 EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT 237
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A ++ +L + P+ T+N+MI+GL K G V + L ++ +++ ++ TY++LI
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+GLC A ++A + +E E + +T+ T++ RCG++++ LE+ M K +
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-S 356
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ +Y ++ L++ G++ EA I M + G D +Y I+ G V++AL +
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+ ++E G D Y + II LCK KRL EA + M+ G N N ++ GL +
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 420 AGHIDRALKFFEGMEVRDS----FTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKAT 475
+ A F M +Y IL+ LC+A +F AS + L+ G++ T
Sbjct: 477 DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT 536
Query: 476 RRAVIDGLISD 486
++ GL D
Sbjct: 537 YSILLCGLCRD 547
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 183/367 (49%), Gaps = 6/367 (1%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D+ T+++LI C + D V + E + DV++YN+++ G R G +L ++
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
+++E + ++ SYNIL+ G DEA +++ ++ + TY + I+GLC
Sbjct: 349 -RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWR-LMPAKGYAADKTTYGIFIHGLCV 406
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
NGYV+ AL + + ++ G +V Y ++I+ LCK +R EA L+ E + G E N+
Sbjct: 407 NGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV 466
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
++ R RL + L EM G +Y ++ L K G+ EA ++M+
Sbjct: 467 CNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
NG +PDL +Y+ ++ R ++D ALEL Q + G D H I+IHGLC +L+
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLD 586
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILV 445
+A+ + +M NLV N +++G K G +RA + M D +Y ++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Query: 446 HNLCRAR 452
LC R
Sbjct: 647 KGLCMCR 653
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 190/405 (46%), Gaps = 12/405 (2%)
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEA-GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
++I Y + D +V +RM+E G P + SYN+L++ V + +F
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 155 SEIRPDVWSYNIL--MHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
+ + P++ +YN+L M C + E R F D + P +Y+ +IN L K G
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKK---EFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGK 199
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE-AGHEPNAITFT 271
+ +AL +F + RG P+V YN LI+G K + A L E + PN T
Sbjct: 200 LDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
+++ +CGR++ L+I M+ D + Y +++ L G V +A+ + ++
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
D+ +YNTM+ + R G++ E+LEL +E + N ++ I+I GL + +++EA
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVN-IVSYNILIKGLLENGKIDEA 378
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHN 447
M + G+ + + GL G++++AL + +E D + Y ++
Sbjct: 379 TMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDC 438
Query: 448 LCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
LC+ +R AS + + G ++ A+I GLI D EA
Sbjct: 439 LCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 166/340 (48%), Gaps = 4/340 (1%)
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
++ Y + MPD+A VFK + +P+ +YN ++N + S+F +
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
G P + TYN LI CK + +AR L + G +P+ +++TV+N + G+L+
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN-GVEPDLASYNTMIY 345
LE+ EM +G D Y ++ +K A E+ ++++ + V P++ ++N MI
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 346 LYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGF 405
+ GRVD+ L++ +++++ D YT++ +IHGLC A +++A + ++
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 406 NLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS---FTYTILVHNLCRARRFLCASKHLV 462
++V N +L G + G I +L+ + ME ++S +Y IL+ L + A+
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWR 383
Query: 463 ACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKA 502
G+ K T I GL +G N+A V ++ +
Sbjct: 384 LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 147/324 (45%), Gaps = 2/324 (0%)
Query: 22 ILNHENPITSFLTQRITHSKNVTFRIM-VKGRSLSTKFLNICIASMCKAKQLDKAECVLI 80
I+++ I L + +R+M KG + I I +C ++KA V+
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 81 DGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKG 140
+ G DV + ++ID C+ + +++ M + G+ + N+L+ G +R
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 141 LFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATY 200
+M ++ RP V SYNIL+ + G EA+ K++L + P TY
Sbjct: 479 RLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG-WKPDLKTY 537
Query: 201 NVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
++++ GLC++ + AL ++ + G +V+ +N LI+GLC + ++A +++
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVE 320
N +T+ T+M F+ G + I M G D +Y T++ L V
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 321 ADEIAEQMMSNGVEPDLASYNTMI 344
A E + ++G+ P + ++N ++
Sbjct: 658 AMEFFDDARNHGIFPTVYTWNILV 681
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 121/252 (48%), Gaps = 3/252 (1%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I +CK K+L++A ++ + K GV + N LI R L M + G
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGC 495
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P V+SYN L+ G + G F +M+E+ +PD+ +Y+IL+ R D A
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 183 VFKDVLLSA-ETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
++ L S ETD +N++I+GLC G + +A+++ N++ R ++TYN L+ G
Sbjct: 556 LWHQFLQSGLETD--VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
K +N A + + G +P+ I++ T+M C + +E + R+ G
Sbjct: 614 FFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPT 673
Query: 302 GFAYCTVVAALV 313
+ + +V A+V
Sbjct: 674 VYTWNILVRAVV 685
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 203/401 (50%), Gaps = 8/401 (1%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
LN+ I + L+ + V+ + + + P+ ++FN +I A C+ D EV M
Sbjct: 155 LNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMP 214
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
E PD +Y +LM G ++ + + D+M P YN+L+ + G
Sbjct: 215 ERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLT 274
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
++ ++ L P+ TYN +I+GLC G + A+S+ + +P +TY L
Sbjct: 275 RVTKLVDNMFLKGCV-PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTL 333
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
INGL K RRA +A RLLS E G+ N ++ +++ F+ G+ E+ + + +M KG
Sbjct: 334 INGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC 393
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
+ Y +V L + G+ EA EI +M+++G P+ +Y++++ +F+ G +EA++
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ 453
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
+ +++K G +++ ++++I GLC R+ EA+ M ++G + VA + ++ GL
Sbjct: 454 VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513
Query: 419 KAGHIDRALKFFEGMEVR-------DSFTYTILVHNLCRAR 452
G +D ALK + M + D TY IL+ LC +
Sbjct: 514 GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK 554
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 181/407 (44%), Gaps = 42/407 (10%)
Query: 35 QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKL-GVLPDVVT 93
+RI + + + +G S S N+ I +CK L + L+D + L G +P+ VT
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVT-KLVDNMFLKGCVPNEVT 294
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
+NTLI C D +LERM + P+ ++Y +L++G V++ + + M
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
E + Y++L+ F+ G +EA +++ + P+ Y+V+++GLC+ G
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK-MAEKGCKPNIVVYSVLVDGLCREGKP 413
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
+ A + + G +P TY++L+ G K EA ++ E + G N ++ +
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN-- 331
++ GR+++ + + ++M + G D AY +++ L G + A ++ +M+
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 533
Query: 332 -GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
+PD+ +YN I++ GLC K ++
Sbjct: 534 PKSQPDVVTYN-----------------------------------ILLDGLCMQKDISR 558
Query: 391 AVQHLDHMNSLGFGFNLVASNCVLDGLG-KAGHIDRALKFFEGMEVR 436
AV L+ M G +++ N L+ L K+ D+ F E + VR
Sbjct: 559 AVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 85/195 (43%), Gaps = 18/195 (9%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM-- 117
++ I +C ++ +A V + +G+ PD V ++++I C S DA ++ M
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLC 530
Query: 118 -KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
+E PDV++YN L+ G + + + + M++ PDV + N ++ +
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN-----TL 585
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYN 236
+++N D + ++ L K V A ++ + + P+ T+
Sbjct: 586 SEKSN----------SCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWA 635
Query: 237 ALINGLCKARRANEA 251
++ +CK ++ N A
Sbjct: 636 MIVREICKPKKINAA 650
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 197/375 (52%), Gaps = 4/375 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI I +C+ + A V+ +K G PDVVT ++LI+ +C+ +++ +M+E
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G PDV+ YN+++ G+ + GL + +FD+M +R D +YN L+ G +
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A R+ +D+++ + P+ T+ +I+ K G A+ ++ + RR P+V TYN+LI
Sbjct: 228 AARLMRDMVMR-DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
NGLC R +EA+++L G P+ +T+ T++N + R+++G ++ EM +G
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D Y T++ + GR A EI +M S P++ +Y+ ++Y RV++AL L
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVL 403
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+ ++K D T+ I+IHG+CK + +A ++ G ++V+ ++ G +
Sbjct: 404 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Query: 420 AGHIDRALKFFEGME 434
D++ + M+
Sbjct: 464 KRQWDKSDLLYRKMQ 478
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 221/448 (49%), Gaps = 39/448 (8%)
Query: 12 NAAYPFTHPAILNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQ 71
+ A F + +L NP+ V F GR+ STK +SM ++
Sbjct: 11 SKANKFLNLCLLQKGNPVI------------VPFISRFWGRTFSTKR-----SSMNLEEE 53
Query: 72 LDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNS 131
+D + ++ LP +V F+ ++ + ++D + M+ G+ D+ SYN
Sbjct: 54 ID----LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 132 LMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSA 191
+++ R F + L + KM++ PDV + + L++ + + NRVF + L +
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC------QGNRVFDAIDLVS 163
Query: 192 ETD-----PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKAR 246
+ + P YN +I+G CK G V++A+ +F ++R G + +TYN+L+ GLC +
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 247 RANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYC 306
R ++A RL+ + PN ITFT V++ + G+ + +++ EM + D F Y
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 307 TVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE 366
+++ L GRV EA ++ + M++ G PD+ +YNT+I + + RVDE +L ++ +
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 367 GPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRA 426
G D T+ II G +A R + A + M+S N+ + +L GL +++A
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKA 400
Query: 427 LKFFEGMEVR----DSFTYTILVHNLCR 450
L FE M+ D TY I++H +C+
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCK 428
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 140/259 (54%), Gaps = 4/259 (1%)
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
+YN++IN LC+ ALS+ + + G+ P+V+T ++LING C+ R +A L+S+
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
E G P+ + + T+++ + G + +E+ M G D Y ++VA L +GR
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
+A + M+ + P++ ++ +I ++ ++G+ EA++L +++ + D +T+ +
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR-- 436
I+GLC R++EA Q LD M + G ++V N +++G K+ +D K F M R
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 437 --DSFTYTILVHNLCRARR 453
D+ TY ++ +A R
Sbjct: 346 VGDTITYNTIIQGYFQAGR 364
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 120/206 (58%), Gaps = 4/206 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I +C ++D+A+ +L V G LPDVVT+NTLI+ +C+ D G ++ M +
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GL D I+YN+++ G + G +F +M + RP++ +Y+IL++ ++
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEK 399
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A +F++ + +E + TYN++I+G+CK G V +A +FR+L +G P+V++Y +I
Sbjct: 400 ALVLFEN-MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Query: 240 NGLCKARRANEARRLLSEFREAGHEP 265
+G C+ R+ +++ L + +E G P
Sbjct: 459 SGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 227/470 (48%), Gaps = 47/470 (10%)
Query: 45 FRIMVKGRSL-STKFLNICIASMCKAKQLDKAECVLIDGVK---LGVLPDVVTFNTLIDA 100
F MVK R S N ++++ K K+ D V+ G K LG+ D+ TFN +I+
Sbjct: 73 FSDMVKSRPFPSIVDFNRLLSAIVKLKKYD---VVISLGKKMEVLGIRNDLYTFNIVINC 129
Query: 101 YCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPD 160
+C +L +M + G PD ++ SL++G R+ + + DKM+E +PD
Sbjct: 130 FCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189
Query: 161 VWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMF 220
+ YN +I+ LCK V++A F
Sbjct: 190 I------------------------------------VAYNAIIDSLCKTKRVNDAFDFF 213
Query: 221 RNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRC 280
+ ++R+G P V+TY AL+NGLC + R ++A RLLS+ + PN IT++ +++ +
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Query: 281 GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASY 340
G++ + E+ EM D Y +++ L R+ EA+++ + M+S G D+ SY
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 341 NTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNS 400
NT+I + + RV++ ++L ++ + G ++ T+ +I G +A +++A + M+
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 401 LGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLC 456
G ++ N +L GL G +++AL FE M+ R D TYT ++ +C+ +
Sbjct: 394 FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Query: 457 ASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQLLR 506
A + G + T ++ GL + GL +E + + K+++ L++
Sbjct: 454 AWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMK 503
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 188/354 (53%), Gaps = 11/354 (3%)
Query: 103 RFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVW 162
R + + ++ M ++ P ++ +N L+S V+ + + + + KM IR D++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 163 SYNILMHCY---FRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
++NI+++C+ F++ + A + +L +P T ++NG C+ V +A+S+
Sbjct: 122 TFNIVINCFCCCFQVSL---ALSILGK-MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
+ G+ P+++ YNA+I+ LCK +R N+A E G PN +T+T ++N
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
R +L++M K T + Y ++ A VK G+V+EA E+ E+M+ ++PD+ +
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
Y+++I R+DEA ++ D + +G D ++ +I+G CKAKR+ + ++ M+
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEV----RDSFTYTILVHNLC 449
G N V N ++ G +AG +D+A +FF M+ D +TY IL+ LC
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 183/355 (51%), Gaps = 6/355 (1%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ C+ ++ A ++ V++G PD+V +N +ID+ C+ + + + ++ G+
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P+V++Y +L++G + + MI+ +I P+V +Y+ L+ + + G EA
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+F++ ++ DP TY+ +INGLC + + A MF + +G + +V++YN LING
Sbjct: 282 LFEE-MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
CKA+R + +L E + G N +T+ T++ F+ G +++ E ++M G + D
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
+ Y ++ L G + +A I E M ++ D+ +Y T+I + G+V+EA L
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL-DG 416
+ +G D T+T ++ GLC L+E M G L+ ++C L DG
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG----LMKNDCTLSDG 511
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 120/236 (50%), Gaps = 9/236 (3%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I +C ++D+A + V G L DVV++NTLI+ +C+ + G ++ M + GL
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
+ ++YN+L+ G + G F +M I PD+W+YNIL+ G ++A
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+F+D + E D TY +I G+CK G V A S+F +L +G P+++TY +++GL
Sbjct: 422 IFED-MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
C +E L ++ ++ G N +C G + E++ +M S GY
Sbjct: 481 CTKGLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGY 528
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 157/355 (44%), Gaps = 45/355 (12%)
Query: 19 HPAILNHENPITSFL-TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAEC 77
P I+ + I S T+R+ + + I KG + + +C + + A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
+L D +K + P+V+T++ L+DA+ + E+ E M + PD+++Y+SL++G
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMH--C------------------------- 170
MFD M+ DV SYN L++ C
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 171 --------YFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRN 222
+F+ G D+A F + P TYN+++ GLC NG + AL +F +
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
+Q+R +++TY +I G+CK + EA L G +P+ +T+TT+M+ G
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDL 337
L + + T+M+ +G + CT + G + + E+ ++M+S G P L
Sbjct: 486 LHEVEALYTKMKQEGLMKND---CT-----LSDGDITLSAELIKKMLSCGYAPSL 532
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 221/459 (48%), Gaps = 17/459 (3%)
Query: 8 ALHFNAAYP-FTH-------PAILNHENPITSFLT-QRITHSKNVTFRIMVKGRSLSTKF 58
+L FN A FTH P+I++ + ++ N+ + + G S
Sbjct: 50 SLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N+ + C++ Q A L +KLG PD+VTF +LI+ +C + ++ +M
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
E G+ PDV+ Y +++ + G L +FD+M IRPDV Y L++ G
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+A+ + + + + P T+N +I+ K G +A ++ + R P + TY +L
Sbjct: 230 DADSLLRG-MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
ING C +EAR++ G P+ + +T+++N +C +++ ++I EM KG
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
T + Y T++ + G+ A E+ M+S GV P++ +YN +++ G+V +AL
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 359 LVDQIEK---EGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD 415
+ + ++K +G + +T+ +++HGLC +L +A+ + M ++ ++
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQ 468
Query: 416 GLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCR 450
G+ KAG + A+ F + + + TYT ++ L R
Sbjct: 469 GMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 195/375 (52%), Gaps = 4/375 (1%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I C ++++A ++ V++G+ PDVV + T+ID+ C+ + + ++M+ G+
Sbjct: 149 INGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGI 208
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PDV+ Y SL++G G + + M + +I+PDV ++N L+ + + G +A
Sbjct: 209 RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEE 268
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
++ + ++ P+ TY +ING C G V A MF ++ +G P+V+ Y +LING
Sbjct: 269 LYNE-MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
CK ++ ++A ++ E + G N IT+TT++ + G+ E+ + M S+G +
Sbjct: 328 CKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMS---NGVEPDLASYNTMIYLYFRQGRVDEALEL 359
Y ++ L G+V +A I E M +GV P++ +YN +++ G++++AL +
Sbjct: 388 RTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMV 447
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+ + K T+TIII G+CKA ++ AV + S G N+V ++ GL +
Sbjct: 448 FEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507
Query: 420 AGHIDRALKFFEGME 434
G A F M+
Sbjct: 508 EGLKHEAHVLFRKMK 522
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 228/470 (48%), Gaps = 19/470 (4%)
Query: 45 FRIMVKGRSLS-----TKFLNICIASMCKAKQLDKAECVLIDGVK-LGVLPDVVTFNTLI 98
F MV+ R L TK LN+ + K K+ D L D ++ +GV D+ T N L+
Sbjct: 60 FTHMVESRPLPSIIDFTKLLNV----IAKMKKFD-VVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 99 DAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIR 158
+ +C+ L +M + G PD++++ SL++G + M ++M+E I+
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 159 PDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALS 218
PDV Y ++ + G + A +F D + + P Y ++NGLC +G +A S
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLF-DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 219 MFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCF 278
+ R + +R P+V+T+NALI+ K + +A L +E PN T+T+++N
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 279 RCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLA 338
G +++ ++ M +KG D AY +++ K +V +A +I +M G+ +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 339 SYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM 398
+Y T+I + + G+ + A E+ + G + T+ +++H LC ++ +A+ + M
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 399 NSL---GFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD----SFTYTILVHNLCRA 451
G N+ N +L GL G +++AL FE M R+ TYTI++ +C+A
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 473
Query: 452 RRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRK 501
+ A + G + T +I GL +GLK+EA + K+++
Sbjct: 474 GKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 183/378 (48%), Gaps = 21/378 (5%)
Query: 92 VTFNTLID------AYCRF----------VSFDAGCEVLERMKEAGLTPDVISYNSLMSG 135
++F+ L+D A+C + + F+ ++ M E+ P +I + L++
Sbjct: 22 LSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNV 81
Query: 136 AVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDP 195
+ F + +++ D + + D+++ N+LM+C+ + P A+ F ++ +P
Sbjct: 82 IAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS-FLGKMMKLGFEP 140
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
T+ +ING C + A+SM + G P+V+ Y +I+ LCK N A L
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 256 SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT 315
+ G P+ + +T+++N GR +L M + D + ++ A VK
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 316 GRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTH 375
G+ ++A+E+ +M+ + P++ +Y ++I + +G VDEA ++ +E +G D +
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 376 TIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEV 435
T +I+G CK K++++A++ M+ G N + ++ G G+ G + A + F M
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 436 R----DSFTYTILVHNLC 449
R + TY +L+H LC
Sbjct: 381 RGVPPNIRTYNVLLHCLC 398
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 174/389 (44%), Gaps = 42/389 (10%)
Query: 19 HPAILNHENPITSF-LTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAEC 77
P I+ + I F L R+ + ++ +++ G I S+CK ++ A
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
+ G+ PDVV + +L++ C + +L M + + PDVI++N+L+ V
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
++G F ++++MI I P++++Y L++ + G DEA ++F ++ + P
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY-LMETKGCFPDV 317
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
Y +ING CK V +A+ +F + ++G +TY LI G + + N A+ + S
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 258 FREAGHEPNAITFTTVMNC---------------------------------------CF 278
G PN T+ +++C C+
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Query: 279 RCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLA 338
G+LE+ L + +MR + Y ++ + K G+V A + + S GV+P++
Sbjct: 438 N-GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 339 SYNTMIYLYFRQGRVDEALELVDQIEKEG 367
+Y TMI FR+G EA L +++++G
Sbjct: 497 TYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 128/284 (45%), Gaps = 4/284 (1%)
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
ALS R L +V Y ++ + + NEA L + E+ P+ I FT ++N
Sbjct: 21 ALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLN 80
Query: 276 CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
+ + + + + ++ G + D + ++ ++ + A +MM G EP
Sbjct: 81 VIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEP 140
Query: 336 DLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHL 395
D+ ++ ++I + R++EA+ +V+Q+ + G D +T II LCK +N A+
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 396 DHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRA 451
D M + G ++V +++GL +G A GM R D T+ L+ +
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 452 RRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
+FL A + ++ T ++I+G +G +EA+++
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 213/432 (49%), Gaps = 6/432 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + S+ + +D+ + V ++ ++ V P++ T+N +++ YC+ + + + + ++ E
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
AGL PD +Y SL+ G ++ +F++M R + +Y L+H DE
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A +F + E P+ TY V+I LC + AL++ + ++ G P + TY LI
Sbjct: 307 AMDLFVK-MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ LC + +AR LL + E G PN IT+ ++N + G +E ++++ M S+ +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ Y ++ K+ V +A + +M+ V PD+ +YN++I R G D A L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+ + G DQ+T+T +I LCK+KR+ EA D + G N+V ++DG K
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 420 AGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKAT 475
AG +D A E M + +S T+ L+H LC + A+ ++ G Q +T
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 476 RRAVIDGLISDG 487
+I L+ DG
Sbjct: 605 DTILIHRLLKDG 616
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 193/378 (51%), Gaps = 4/378 (1%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
+ I S+C +++ +A ++ + + G+ P++ T+ LID+ C F+ E+L +M E
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
GL P+VI+YN+L++G ++G+ + + + M ++ P+ +YN L+ Y + +
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAM 447
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
+ K +L + P TYN +I+G C++G +A + + RG VP+ TY ++I+
Sbjct: 448 GVLNK--MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
LCK++R EA L + G PN + +T +++ + G++++ +L +M SK
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
+ + ++ L G++ EA + E+M+ G++P +++ +I+ + G D A
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
Q+ G D +T+T I C+ RL +A + M G +L + ++ G G
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Query: 421 GHIDRALKFFEGMEVRDS 438
G + A + M RD+
Sbjct: 686 GQTNFAFDVLKRM--RDT 701
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 191/373 (51%), Gaps = 10/373 (2%)
Query: 34 TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVT 93
++R + + N+ + G + + I S+C + +KA +L ++ G++P+V+T
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
+N LI+ YC+ + +V+E M+ L+P+ +YN L+ G + + + + +KM+
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKML 454
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD----PSTATYNVMINGLCK 209
E ++ PDV +YN L+ R G D A R LLS D P TY MI+ LCK
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYR-----LLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
+ V A +F +L+++G P V+ Y ALI+G CKA + +EA +L + PN++T
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
F +++ G+L++ + +M G ++ L+K G A +QM+
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
S+G +PD +Y T I Y R+GR+ +A +++ ++ + G D +T++ +I G + N
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 390 EAVQHLDHMNSLG 402
A L M G
Sbjct: 690 FAFDVLKRMRDTG 702
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 205/450 (45%), Gaps = 22/450 (4%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I C+ K LD A V + G + V + LI C D ++ +MK+
Sbjct: 260 IMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDEC 319
Query: 123 TPDVISYNSLMS---GAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILM-----HCYFRL 174
P V +Y L+ G+ RK L++ +M E+ I+P++ +Y +L+ C F
Sbjct: 320 FPTVRTYTVLIKSLCGSERKS---EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF-- 374
Query: 175 GMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLT 234
E R +L P+ TYN +ING CK G + +A+ + ++ R P T
Sbjct: 375 ----EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRT 430
Query: 235 YNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
YN LI G CK+ ++A +L++ E P+ +T+ ++++ R G + +L+ M
Sbjct: 431 YNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 295 SKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
+G D + Y +++ +L K+ RV EA ++ + + GV P++ Y +I Y + G+VD
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 355 EALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL 414
EA +++++ + + T +IHGLC +L EA + M +G + ++
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 415 DGLGKAGHIDRALKFFEGM----EVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQ 470
L K G D A F+ M D+ TYT + CR R L A + + G
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 471 VLKATRRAVIDGLISDGLKNEAKKVRLKIR 500
T ++I G G N A V ++R
Sbjct: 670 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 188/368 (51%), Gaps = 6/368 (1%)
Query: 129 YNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL 188
YN+L++ R GL ++ +M+E ++ P++++YN +++ Y +LG +EAN+ ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 189 LSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRA 248
A DP TY +I G C+ + +A +F + +G + Y LI+GLC ARR
Sbjct: 246 -EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 249 NEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTV 308
+EA L + ++ P T+T ++ R + L ++ EM G + Y +
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 309 VAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGP 368
+ +L + +A E+ QM+ G+ P++ +YN +I Y ++G +++A+++V+ +E
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 369 GNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALK 428
+ T+ +I G CK+ +++A+ L+ M ++V N ++DG ++G+ D A +
Sbjct: 425 SPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 429 FFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLI 484
M R D +TYT ++ +LC+++R A + Q G A+IDG
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 485 SDGLKNEA 492
G +EA
Sbjct: 544 KAGKVDEA 551
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 210/494 (42%), Gaps = 97/494 (19%)
Query: 48 MVKGRSLS--TKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
+++ R LS T+ N I CK+ + KA VL ++ VLPDVVT+N+LID CR
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
+FD+ +L M + GL PD +Y S++ + +FD + + + P+V Y
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
L+ Y + G DEA+ + + +LS P++ T+N +I+GLC +G + A + + +
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEK-MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQ 285
G P V T LI+ L K + A + +G +P+A T+TT + R GRL
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655
Query: 286 GLEILTEMRSKGYTFDGFAYCTVVAALVKTGR---------------------------- 317
+++ +MR G + D F Y +++ G+
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Query: 318 ----------------------VVEAD---EIAEQMMSNGVEPDLASYNTMIYLYFRQGR 352
++E D E+ E+M+ + V P+ SY +I G
Sbjct: 716 HLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGN 775
Query: 353 VDEALELVDQIEK-EGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM------------- 398
+ A ++ D +++ EG + ++ CK K+ NEA + +D M
Sbjct: 776 LRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCK 835
Query: 399 --------------------NSLGFGF--NLVASNCVLDGLGKAGHIDRALKFFEGMEVR 436
N L G+ + +A ++DG+GK G ++ + F ME
Sbjct: 836 VLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895
Query: 437 ----DSFTYTILVH 446
S TY++L+
Sbjct: 896 GCKFSSQTYSLLIE 909
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 140/342 (40%), Gaps = 20/342 (5%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N I +C +L +A + VK+G+ P V T LI + FD ++M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
+G PD +Y + + R+G M KM E+ + PD+++Y+ L+ Y LG +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGY------------------VHNALSMF 220
A V K + +PS T+ +I L + Y + +
Sbjct: 690 FAFDVLKR-MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 221 RNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF-REAGHEPNAITFTTVMNCCFR 279
+ P +Y LI G+C+ A ++ R G P+ + F +++CC +
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
+ + +++ +M G+ + ++ L K G + + ++ G D +
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELA 868
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHG 381
+ +I +QG V+ EL + +EK G T++++I G
Sbjct: 869 WKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 337 LASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLD 396
+ YNT++ R G VDE ++ ++ ++ + YT+ +++G CK + EA Q++
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 397 HMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEV----RDSFTYTILVHNLCRAR 452
+ G + ++ G + +D A K F M + R+ YT L+H LC AR
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 453 RF 454
R
Sbjct: 303 RI 304
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 188/368 (51%), Gaps = 1/368 (0%)
Query: 35 QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTF 94
R++ + +V ++M G S + C ++ A ++I VK G P+VV +
Sbjct: 120 SRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
NTLID C+ + E+L M++ GL DV++YN+L++G G + M M++
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVH 214
I PDV ++ L+ + + G DEA ++K+++ S+ DP+ TYN +INGLC +G ++
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS-VDPNNVTYNSIINGLCMHGRLY 298
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
+A F + +G P V+TYN LI+G CK R +E +L G + T+ T++
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 275 NCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
+ + G+L L+I M S+ T D +C ++ L G + A + M +
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 335 PDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQH 394
+ +YN MI+ + +V++A EL ++ EG D T+TI+I GLCK EA +
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 395 LDHMNSLG 402
+ M G
Sbjct: 479 IRRMKEEG 486
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 212/424 (50%), Gaps = 9/424 (2%)
Query: 88 LPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLH 147
LP +V F L+ A ++ ++M+ G++ D+ S+ L+ R L
Sbjct: 68 LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALS 127
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAET--DPSTATYNVMIN 205
+ KM++ P + ++ L+H + + +A F V+L ++ +P+ YN +I+
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA---FSLVILMVKSGYEPNVVVYNTLID 184
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
GLCKNG ++ AL + ++++G +V+TYN L+ GLC + R ++A R+L + + P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
+ +TFT +++ + G L++ E+ EM + Y +++ L GR+ +A +
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
+ M S G P++ +YNT+I + + VDE ++L ++ EG D +T+ +IHG C+
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364
Query: 386 KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSF----TY 441
+L A+ M S +++ +L GL G I+ AL F+ M + + Y
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424
Query: 442 TILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRK 501
I++H LC+A + A + G + T +I GL +G + EA ++ ++++
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Query: 502 AQLL 505
++
Sbjct: 485 EGII 488
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 139/298 (46%), Gaps = 13/298 (4%)
Query: 209 KNGYVH-----NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
+ G++H +A ++F + +P ++ + L+ RR + G
Sbjct: 43 RTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGI 102
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
+ +FT +++C RC RL L +L +M GY + +++ R+ +A
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
+ M+ +G EP++ YNT+I + G ++ ALEL++++EK+G G D T+ ++ GLC
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 384 KAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSF 439
+ R ++A + L M ++V ++D K G++D A + ++ M ++
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 440 TYTILVHNLCRARRFLCASK--HLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
TY +++ LC R A K L+A C V+ T +I G + +E K+
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV--TYNTLISGFCKFRMVDEGMKL 338
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 120/292 (41%), Gaps = 18/292 (6%)
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
L G A S +R R GF+ + R +A L E + P+
Sbjct: 25 LLGGGAAARAFSDYREKLRTGFLHSI--------------RFEDAFALFFEMVHSQPLPS 70
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
+ FT ++ R E + +M G + D +++ ++ + R+ A +
Sbjct: 71 IVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLG 130
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
+MM G EP + ++ ++++ + R+ +A LV + K G + + +I GLCK
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 387 RLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYT 442
LN A++ L+ M G G ++V N +L GL +G A + M R D T+T
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 443 ILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKK 494
L+ + A + +Q T ++I+GL G +AKK
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 193/389 (49%), Gaps = 7/389 (1%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG ++ I +C+ +L +AE + ++ G+LPD V + TLID +C+ A
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
+ M +TPDV++Y +++SG + G +F +M + PD ++ L++
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
Y + G +A RV + ++ A P+ TY +I+GLCK G + +A + + + G
Sbjct: 430 GYCKAGHMKDAFRV-HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P + TYN+++NGLCK+ EA +L+ EF AG + +T+TT+M+ + G +++ EI
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
L EM KG + ++ G + + +++ M++ G+ P+ ++N+++ Y
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
+ + A + + G G D T+ ++ G CKA+ + EA M GF ++
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 410 SNCVLDGLGKAGHIDRALKFFEGMEVRDS 438
+ ++ G K KF E EV D
Sbjct: 669 YSVLIKGFLKRK------KFLEAREVFDQ 691
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 214/437 (48%), Gaps = 40/437 (9%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI I +C+ ++ +A +L+ G PDV++++T+++ YCRF D +++E MK
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 120 AGLTPDVISYNSLM----------------SGAVRKGLFPMTL----------------- 146
GL P+ Y S++ S +R+G+ P T+
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 147 --HMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
F +M +I PDV +Y ++ + ++G EA ++F ++ +P + T+ +I
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTELI 428
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
NG CK G++ +A + ++ + G P V+TY LI+GLCK + A LL E + G +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
PN T+ +++N + G +E+ ++++ E + G D Y T++ A K+G + +A EI
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
++M+ G++P + ++N ++ + G +++ +L++ + +G + T ++ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFT 440
L A M S G G + ++ G KA ++ A F+ M+ + T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 441 YTILVHNLCRARRFLCA 457
Y++L+ + ++FL A
Sbjct: 669 YSVLIKGFLKRKKFLEA 685
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 182/370 (49%), Gaps = 5/370 (1%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
++GV +V ++N +I C+ +L M+ G TPDVISY+++++G R G
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
+ + M ++P+ + Y ++ R+ EA F +++ P T Y +
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL-PDTVVYTTL 357
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
I+G CK G + A F + R P+VLTY A+I+G C+ EA +L E G
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
EP+++TFT ++N + G ++ + M G + + Y T++ L K G + A+E
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
+ +M G++P++ +YN+++ + G ++EA++LV + E G D T+T ++ C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 384 KAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSF 439
K+ +++A + L M G +V N +++G G ++ K M + ++
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 440 TYTILVHNLC 449
T+ LV C
Sbjct: 598 TFNSLVKQYC 607
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 186/388 (47%), Gaps = 6/388 (1%)
Query: 113 VLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT-LHMFDKMIESEIRPDVWSYNILMHCY 171
V E+M GL V S N ++ + T + +F + E + +V SYNI++H
Sbjct: 197 VFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFV 256
Query: 172 FRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
+LG EA+ + + L T P +Y+ ++NG C+ G + + ++R+G P
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYT-PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILT 291
Y ++I LC+ + EA SE G P+ + +TT+++ + G + +
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 292 EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG 351
EM S+ T D Y +++ + G +VEA ++ +M G+EPD ++ +I Y + G
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 352 RVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASN 411
+ +A + + + + G + T+T +I GLCK L+ A + L M +G N+ N
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 412 CVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQC 467
+++GL K+G+I+ A+K E D+ TYT L+ C++ A + L L
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 468 GFQVLKATRRAVIDGLISDGLKNEAKKV 495
G Q T +++G G+ + +K+
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 155/314 (49%), Gaps = 3/314 (0%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G+ PD VTF LI+ YC+ V M +AG +P+V++Y +L+ G ++G
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+ +M + ++P++++YN +++ + G +EA ++ + +A + T TY +++
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE-FEAAGLNADTVTYTTLMD 534
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
CK+G + A + + + +G P ++T+N L+NG C + +LL+ G P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 266 NAITFTT-VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
NA TF + V C R L+ I +M S+G DG Y +V K + EA +
Sbjct: 595 NATTFNSLVKQYCIR-NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
++M G +++Y+ +I + ++ + EA E+ DQ+ +EG D+ K
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713
Query: 385 AKRLNEAVQHLDHM 398
KR + V +D +
Sbjct: 714 GKRPDTIVDPIDEI 727
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 159/337 (47%), Gaps = 6/337 (1%)
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY-VHNALSMFRN 222
+++ G+ EA RVF+ +L+ S + NV + L K+ Y A+ +FR
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEK-MLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
G V +YN +I+ +C+ R EA LL G+ P+ I+++TV+N R G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
L++ +++ M+ KG + + Y +++ L + ++ EA+E +M+ G+ PD Y T
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 343 MIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
+I + ++G + A + ++ D T+T II G C+ + EA + M G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 403 FGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCAS 458
+ V +++G KAGH+ A + M + TYT L+ LC+ A+
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 459 KHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
+ L + G Q T ++++GL G EA K+
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 193/389 (49%), Gaps = 7/389 (1%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG ++ I +C+ +L +AE + ++ G+LPD V + TLID +C+ A
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
+ M +TPDV++Y +++SG + G +F +M + PD ++ L++
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
Y + G +A RV + ++ A P+ TY +I+GLCK G + +A + + + G
Sbjct: 430 GYCKAGHMKDAFRV-HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P + TYN+++NGLCK+ EA +L+ EF AG + +T+TT+M+ + G +++ EI
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
L EM KG + ++ G + + +++ M++ G+ P+ ++N+++ Y
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
+ + A + + G G D T+ ++ G CKA+ + EA M GF ++
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 410 SNCVLDGLGKAGHIDRALKFFEGMEVRDS 438
+ ++ G K KF E EV D
Sbjct: 669 YSVLIKGFLKRK------KFLEAREVFDQ 691
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 214/437 (48%), Gaps = 40/437 (9%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI I +C+ ++ +A +L+ G PDV++++T+++ YCRF D +++E MK
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 120 AGLTPDVISYNSLM----------------SGAVRKGLFPMTL----------------- 146
GL P+ Y S++ S +R+G+ P T+
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 147 --HMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
F +M +I PDV +Y ++ + ++G EA ++F ++ +P + T+ +I
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTELI 428
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
NG CK G++ +A + ++ + G P V+TY LI+GLCK + A LL E + G +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
PN T+ +++N + G +E+ ++++ E + G D Y T++ A K+G + +A EI
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
++M+ G++P + ++N ++ + G +++ +L++ + +G + T ++ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFT 440
L A M S G G + ++ G KA ++ A F+ M+ + T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 441 YTILVHNLCRARRFLCA 457
Y++L+ + ++FL A
Sbjct: 669 YSVLIKGFLKRKKFLEA 685
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 182/370 (49%), Gaps = 5/370 (1%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
++GV +V ++N +I C+ +L M+ G TPDVISY+++++G R G
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
+ + M ++P+ + Y ++ R+ EA F +++ P T Y +
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL-PDTVVYTTL 357
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
I+G CK G + A F + R P+VLTY A+I+G C+ EA +L E G
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
EP+++TFT ++N + G ++ + M G + + Y T++ L K G + A+E
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
+ +M G++P++ +YN+++ + G ++EA++LV + E G D T+T ++ C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 384 KAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSF 439
K+ +++A + L M G +V N +++G G ++ K M + ++
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 440 TYTILVHNLC 449
T+ LV C
Sbjct: 598 TFNSLVKQYC 607
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 186/388 (47%), Gaps = 6/388 (1%)
Query: 113 VLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT-LHMFDKMIESEIRPDVWSYNILMHCY 171
V E+M GL V S N ++ + T + +F + E + +V SYNI++H
Sbjct: 197 VFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFV 256
Query: 172 FRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
+LG EA+ + + L T P +Y+ ++NG C+ G + + ++R+G P
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYT-PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILT 291
Y ++I LC+ + EA SE G P+ + +TT+++ + G + +
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 292 EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG 351
EM S+ T D Y +++ + G +VEA ++ +M G+EPD ++ +I Y + G
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 352 RVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASN 411
+ +A + + + + G + T+T +I GLCK L+ A + L M +G N+ N
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 412 CVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQC 467
+++GL K+G+I+ A+K E D+ TYT L+ C++ A + L L
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 468 GFQVLKATRRAVIDGLISDGLKNEAKKV 495
G Q T +++G G+ + +K+
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 155/314 (49%), Gaps = 3/314 (0%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G+ PD VTF LI+ YC+ V M +AG +P+V++Y +L+ G ++G
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+ +M + ++P++++YN +++ + G +EA ++ + +A + T TY +++
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE-FEAAGLNADTVTYTTLMD 534
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
CK+G + A + + + +G P ++T+N L+NG C + +LL+ G P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 266 NAITFTT-VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
NA TF + V C R L+ I +M S+G DG Y +V K + EA +
Sbjct: 595 NATTFNSLVKQYCIR-NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
++M G +++Y+ +I + ++ + EA E+ DQ+ +EG D+ K
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713
Query: 385 AKRLNEAVQHLDHM 398
KR + V +D +
Sbjct: 714 GKRPDTIVDPIDEI 727
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 159/337 (47%), Gaps = 6/337 (1%)
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY-VHNALSMFRN 222
+++ G+ EA RVF+ +L+ S + NV + L K+ Y A+ +FR
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEK-MLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
G V +YN +I+ +C+ R EA LL G+ P+ I+++TV+N R G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
L++ +++ M+ KG + + Y +++ L + ++ EA+E +M+ G+ PD Y T
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 343 MIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
+I + ++G + A + ++ D T+T II G C+ + EA + M G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 403 FGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCAS 458
+ V +++G KAGH+ A + M + TYT L+ LC+ A+
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 459 KHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
+ L + G Q T ++++GL G EA K+
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/506 (25%), Positives = 239/506 (47%), Gaps = 21/506 (4%)
Query: 5 AAPALHFNAAYPFTHPAILNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIA 64
A LH N Y + I F R +S +R M++ +F+
Sbjct: 9 AKSFLHRNLLYSGNSGTSPSSSFSICGFCFSRRAYSNGSDYREMLRN---GIRFM----- 60
Query: 65 SMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTP 124
+LD + + V+ LP + F+ L+ A + +D + E+M+ G+
Sbjct: 61 ------KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPH 114
Query: 125 DVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVF 184
++ + N L++ R + L KMI+ P + ++ L++ + R +A +F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 185 KDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCK 244
D ++ P+ YN +I+GLCK+ V NAL + +++ G P+V+TYN+LI+GLC
Sbjct: 175 -DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 245 ARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFA 304
+ R ++A R++S + P+ TF +++ C + GR+ + E EM + D
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 305 YCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIE 364
Y ++ L R+ EA+E+ M+S G PD+ +Y+ +I Y + +V+ ++L ++
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 365 KEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHID 424
+ G + T+TI+I G C+A +LN A + M G N++ N +L GL G I+
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 425 RALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQC-GFQVLKATRRAV 479
+AL M+ D TY I++ +C+A + + + L C G T +
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGE-VADAWDIYCSLNCQGLMPDIWTYTTM 472
Query: 480 IDGLISDGLKNEAKKVRLKIRKAQLL 505
+ GL GL+ EA + K+++ +L
Sbjct: 473 MLGLYKKGLRREADALFRKMKEDGIL 498
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 162/354 (45%), Gaps = 37/354 (10%)
Query: 19 HPAILNHENPITSFLTQRITHSKNVTFRIMVK-GRSLSTKFLNICIASMCKAKQLDKAEC 77
P+I+ + + F + F MV G + N I +CK+KQ+D A
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
+L K G+ PDVVT+N+LI C + ++ M + + PDV ++N+L+ V
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
++G +++MI + PD+ +Y++L++ DEA +F ++S P
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF-GFMVSKGCFPDV 326
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFV---------------------------- 229
TY+++ING CK+ V + + +F + +RG V
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 230 -------PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
P ++TYN L++GLC + +A +L++ ++ G + + +T+ ++ + G
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPD 336
+ +I + +G D + Y T++ L K G EAD + +M +G+ P+
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 212/439 (48%), Gaps = 42/439 (9%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
LNI I C+ + A VL +KLG PD TFNTLI +++RM
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
E G PDV++YNS+++G R G + L + KM E ++ DV+
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF---------------- 229
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
TY+ +I+ LC++G + A+S+F+ ++ +G V+TYN+L
Sbjct: 230 --------------------TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
+ GLCKA + N+ LL + PN ITF +++ + G+L++ E+ EM ++G
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
+ + Y T++ R+ EA+ + + M+ N PD+ ++ ++I Y RVD+ ++
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
+ I K G + T++I++ G C++ ++ A + M S G +++ +LDGL
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 419 KAGHIDRALKFFEGMEVRDS----FTYTILVHNLCRARRFLCASKHLVACLQC-GFQVLK 473
G +++AL+ FE ++ YT ++ +C+ + A +L L C G +
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW-NLFCSLPCKGVKPNV 508
Query: 474 ATRRAVIDGLISDGLKNEA 492
T +I GL G +EA
Sbjct: 509 MTYTVMISGLCKKGSLSEA 527
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 219/448 (48%), Gaps = 5/448 (1%)
Query: 42 NVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAY 101
+V ++M G T N I + ++ +A ++ V+ G PDVVT+N++++
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203
Query: 102 CRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDV 161
CR ++L +M+E + DV +Y++++ R G + +F +M I+ V
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 162 WSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFR 221
+YN L+ + G ++ + KD ++S E P+ T+NV+++ K G + A +++
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKD-MVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 222 NLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCG 281
+ RG P ++TYN L++G C R +EA +L P+ +TFT+++
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 282 RLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYN 341
R++ G+++ + +G + Y +V ++G++ A+E+ ++M+S+GV PD+ +Y
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 342 TMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
++ G++++ALE+ + ++K +T II G+CK ++ +A +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 402 GFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCA 457
G N++ ++ GL K G + A ME + TY L+ R +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 458 SKHLVACLQCGFQVLKATRRAVIDGLIS 485
+K + CGF ++ + VID L+S
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 176/340 (51%), Gaps = 2/340 (0%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG S N + +CKA + + +L D V ++P+V+TFN L+D + +
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
E+ + M G++P++I+YN+LM G + +M D M+ ++ PD+ ++ L+
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
Y + D+ +VF+++ + TY++++ G C++G + A +F+ + G +
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLV-ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P+V+TY L++GLC + +A + + +++ + + +TT++ + G++E +
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
+ KG + Y +++ L K G + EA+ + +M +G P+ +YNT+I + R
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA-KRL 388
G + + +L+++++ G D + ++I L A KRL
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRL 595
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 193/401 (48%), Gaps = 5/401 (1%)
Query: 108 DAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNIL 167
D + + M + P ++ ++ S R F + L ++ + I ++++ NI+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 168 MHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRG 227
++C+ R A V V + +P T T+N +I GL G V A+ + + G
Sbjct: 130 INCFCRCCKTCFAYSVLGKV-MKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 228 FVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGL 287
P+V+TYN+++NG+C++ + A LL + E + + T++T+++ R G ++ +
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 288 EILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLY 347
+ EM +KG Y ++V L K G+ + + + M+S + P++ ++N ++ ++
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 348 FRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNL 407
++G++ EA EL ++ G + T+ ++ G C RL+EA LD M ++
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 408 VASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVA 463
V ++ G +D +K F + R ++ TY+ILV C++ + A +
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 464 CLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQL 504
+ G T ++DGL +G +A ++ ++K+++
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 205/410 (50%), Gaps = 6/410 (1%)
Query: 45 FRIMVKGRSL-STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
F MVK R L S N ++++ K K+ D + +L ++ + T+N LI+ +CR
Sbjct: 73 FGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCR 132
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
+L +M + G P +++ +SL++G + + D+M+E RPD +
Sbjct: 133 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 192
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
+ L+H F EA + D ++ P+ TY V++NGLCK G AL++ +
Sbjct: 193 FTTLIHGLFLHNKASEAVALV-DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
+ +V+ +N +I+ LCK R ++A L E G PN +T++++++C GR
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
++L++M K + + ++ A VK G+ VEA+++ + M+ ++PD+ +YN++
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
+ + R+D+A ++ + + + D T+ +I G CK+KR+ + + M+ G
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLC 449
+ V ++ GL G D A K F+ M D TY+IL+ LC
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 207/409 (50%), Gaps = 6/409 (1%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
V+ G P++VT+ +++ C+ D +L +M+ A + DV+ +N+++ +
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
L++F +M IRP+V +Y+ L+ C G +A+++ D ++ + +P+ T+N
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD-MIEKKINPNLVTFNA 335
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+I+ K G A ++ ++ +R P++ TYN+L+NG C R ++A+++
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
P+ +T+ T++ + R+E G E+ EM +G D Y T++ L G A
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
++ +QM+S+GV PD+ +Y+ ++ G++++ALE+ D ++K D Y +T +I G+
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDS 438
CKA ++++ ++ G N+V N ++ GL + A + M+ + +S
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Query: 439 FTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
TY L+ R +++ + C F V A+ ++ ++ DG
Sbjct: 576 GTYNTLIRAHLRDGDKAASAELIREMRSCRF-VGDASTIGLVANMLHDG 623
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 130/259 (50%), Gaps = 2/259 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + C +LDKA+ + V PDVVT+NTLI +C+ + G E+ M
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GL D ++Y +L+ G G +F +M+ + PD+ +Y+IL+ G ++
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A VF D + +E Y MI G+CK G V + +F +L +G P V+TYN +I
Sbjct: 489 ALEVF-DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+GLC R EA LL + +E G PN+ T+ T++ R G E++ EMRS +
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 607
Query: 300 FDGFAYCTVVAALVKTGRV 318
D + +VA ++ GR+
Sbjct: 608 GDA-STIGLVANMLHDGRL 625
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 182/377 (48%), Gaps = 7/377 (1%)
Query: 124 PDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRV 183
P ++ +N L+S + F + + + +KM EI +++YNIL++C+ R A +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 184 FKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLC 243
++ +PS T + ++NG C + +A+++ + G+ P+ +T+ LI+GL
Sbjct: 143 LGK-MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 244 KARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGF 303
+A+EA L+ + G +PN +T+ V+N + G + L +L +M + D
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 304 AYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV-DQ 362
+ T++ +L K V +A + ++M + G+ P++ +Y+++I GR +A +L+ D
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
IEK+ N T +I K + EA + D M ++ N +++G
Sbjct: 322 IEKKINPN-LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 423 IDRALKFFEGMEVRDSF----TYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRA 478
+D+A + FE M +D F TY L+ C+++R ++ G T
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 479 VIDGLISDGLKNEAKKV 495
+I GL DG + A+KV
Sbjct: 441 LIQGLFHDGDCDNAQKV 457
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 215/465 (46%), Gaps = 44/465 (9%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
+I + N+ R++ G S + N I S+CK ++ +AE + K+G+ P+ VT++
Sbjct: 347 KIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYS 406
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLT-------------------------------- 123
LID +CR D L M + GL
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 124 ---PDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
P V++Y SLM G KG L ++ +M I P ++++ L+ FR G+ +A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
++F + + P+ TYNVMI G C+ G + A + + +G VP+ +Y LI+
Sbjct: 527 VKLFNE-MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
GLC +A+EA+ + + E N I +T +++ R G+LE+ L + EM +G
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
D Y ++ +K + ++M G++PD Y +MI + G EA +
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
D + EG ++ T+T +I+GLCKA +NEA M + N V C LD L K
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK- 764
Query: 421 GHID--RALKF----FEGMEVRDSFTYTILVHNLCRARRFLCASK 459
G +D +A++ +G+ + ++ TY +L+ CR R AS+
Sbjct: 765 GEVDMQKAVELHNAILKGL-LANTATYNMLIRGFCRQGRIEEASE 808
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 204/471 (43%), Gaps = 41/471 (8%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMVK-GRSLSTKFLNICIASMCKAKQLDKAECV 78
P + + I S R H + F M K G + +I I C+ +LD A
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
L + V G+ V +N+LI+ +C+F A + M L P V++Y SLM G
Sbjct: 425 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
KG L ++ +M I P ++++ L+ FR G+ +A ++F + + P+
Sbjct: 485 KGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE-MAEWNVKPNRV 543
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
TYNVMI G C+ G + A + + +G VP+ +Y LI+GLC +A+EA+ +
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
+ E N I +T +++ R G+LE+ L + EM +G D Y ++ +K
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
+ ++M G++PD Y +MI + G EA + D + EG ++ T+T +
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD----------------------- 415
I+GLCKA +NEA M + N V C LD
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783
Query: 416 ------------GLGKAGHIDRALKFFEGM----EVRDSFTYTILVHNLCR 450
G + G I+ A + M D TYT +++ LCR
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCR 834
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 207/434 (47%), Gaps = 22/434 (5%)
Query: 32 FLTQRITHSKNV-----TFRIMVKGRSL--STKFLNICIASMCKAKQLDKAECVLIDGVK 84
L Q S+ V F++M+ SL + L+ + + K + A + D V
Sbjct: 161 LLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVS 220
Query: 85 LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
+G+ PDV + +I + C E++ M+ G +++ YN L+ G +K
Sbjct: 221 VGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWE 280
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCY-----FRLGMPDEANRVFKDVLLSAETDPSTAT 199
+ + + +++PDV +Y L++ F +G+ D +L PS A
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLE------MMDEMLCLRFSPSEAA 334
Query: 200 YNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR 259
+ ++ GL K G + AL++ + + G P + YNALI+ LCK R+ +EA L
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 260 EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVV 319
+ G PN +T++ +++ R G+L+ L L EM G + Y +++ K G +
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIII 379
A+ +M++ +EP + +Y +++ Y +G++++AL L ++ +G YT T ++
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----V 435
GL +A + +AV+ + M N V N +++G + G + +A +F + M V
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Query: 436 RDSFTYTILVHNLC 449
D+++Y L+H LC
Sbjct: 575 PDTYSYRPLIHGLC 588
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 194/390 (49%), Gaps = 5/390 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N+ I +CK +++ +A + D + PDVVT+ TL+ C+ F+ G E+++ M
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC 325
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
+P + +SL+ G ++G L++ ++++ + P+++ YN L+ + E
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A +F D + P+ TY+++I+ C+ G + ALS + G V YN+LI
Sbjct: 386 AELLF-DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
NG CK + A ++E EP +T+T++M G++ + L + EM KG
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ + T+++ L + G + +A ++ +M V+P+ +YN MI Y +G + +A E
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+ ++ ++G D Y++ +IHGLC + +EA +D ++ N + +L G +
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 420 AGHIDRALKFFEGMEVR----DSFTYTILV 445
G ++ AL + M R D Y +L+
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 193/445 (43%), Gaps = 69/445 (15%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAG 110
G LS N I CK + AE + + + + P VVT+ +L+ YC +
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 111 CEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHC 170
+ M G+ P + ++ +L+SG R GL + +F++M E ++P+ +YN+++
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Query: 171 YFRLG-----------------MPDEAN-----------------RVFKDVLLSAETDPS 196
Y G +PD + +VF D L + +
Sbjct: 552 YCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611
Query: 197 TATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
Y +++G C+ G + ALS+ + + +RG +++ Y LI+G K + LL
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLK 671
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
E + G +P+ + +T++++ + G ++ I M ++G + Y V+ L K G
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Query: 317 RVVEADEIAEQM-------------------------MSNGVE----------PDLASYN 341
V EA+ + +M M VE + A+YN
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYN 791
Query: 342 TMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
+I + RQGR++EA EL+ ++ +G D T+T +I+ LC+ + +A++ + M
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 402 GFGFNLVASNCVLDGLGKAGHIDRA 426
G + VA N ++ G AG + +A
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKA 876
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 183/435 (42%), Gaps = 41/435 (9%)
Query: 2 NLSAAPALHFNAAYPFTHPAILNHENPITSFLTQ-RITHSKNVTFRIMVKGRSLSTKFLN 60
++SAA P ++ + + + + ++ +I + + + KG + S
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
++ + +A + A + + + V P+ VT+N +I+ YC E L+ M E
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
G+ PD SY L+ G G D + + + Y L+H + R G +EA
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 181 NRVFKDV------------------------------LLSAETD----PSTATYNVMING 206
V +++ LL D P Y MI+
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
K G A ++ + G VP +TY A+INGLCKA NEA L S+ + PN
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN 751
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRS---KGYTFDGFAYCTVVAALVKTGRVVEADE 323
+T+ ++ + E ++ E+ + KG + Y ++ + GR+ EA E
Sbjct: 752 QVTYGCFLDILTKG---EVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASE 808
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
+ +M+ +GV PD +Y TMI R+ V +A+EL + + ++G D+ + +IHG C
Sbjct: 809 LITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868
Query: 384 KAKRLNEAVQHLDHM 398
A + +A + + M
Sbjct: 869 VAGEMGKATELRNEM 883
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 148/311 (47%), Gaps = 5/311 (1%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLP-DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAG 121
I +C Q +A+ V +DG+ G + + + L+ +CR + V + M + G
Sbjct: 584 IHGLCLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 122 LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
+ D++ Y L+ G+++ + + +M + ++PD Y ++ + G EA
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
++ D++++ P+ TY +INGLCK G+V+ A + +Q VP +TY ++
Sbjct: 703 GIW-DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDI 761
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
L K + L G N T+ ++ R GR+E+ E++T M G + D
Sbjct: 762 LTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPD 821
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
Y T++ L + V +A E+ M G+ PD +YNT+I+ G + +A EL +
Sbjct: 822 CITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRN 881
Query: 362 QIEKEG--PGN 370
++ ++G P N
Sbjct: 882 EMLRQGLIPNN 892
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 153/335 (45%), Gaps = 8/335 (2%)
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
+++L+ Y R + VFK ++ P T + +++GL K + A+ +F ++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
G P+V Y +I LC+ + + A+ +++ G + N + + +++ + ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
+ + I ++ K D YCT+V L K E+ ++M+ P A+ +++
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
+ ++G+++EAL LV ++ G + + + +I LCK ++ +EA D M +G
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS------FTYTILVHNLCRARRFLCA 457
N V + ++D + G +D AL F E+ D+ + Y L++ C+ A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLG--EMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 458 SKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
+ + + T +++ G S G N+A
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 5/189 (2%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVL-ERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
G +P+ VT+ +I+ C+ F EVL +M+ P+ ++Y + + KG M
Sbjct: 712 GCVPNEVTYTAVINGLCK-AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVDM 769
Query: 145 TLHM-FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
+ I + + +YN+L+ + R G +EA+ + ++ P TY M
Sbjct: 770 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITR-MIGDGVSPDCITYTTM 828
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
IN LC+ V A+ ++ ++ +G P+ + YN LI+G C A +A L +E G
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Query: 264 EPNAITFTT 272
PN T T
Sbjct: 889 IPNNKTSRT 897
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 57/113 (50%)
Query: 48 MVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSF 107
++KG +T N+ I C+ ++++A ++ + GV PD +T+ T+I+ CR
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 108 DAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPD 160
E+ M E G+ PD ++YN+L+ G G + ++M+ + P+
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 204/407 (50%), Gaps = 7/407 (1%)
Query: 45 FRIMVKGRSLSTKF-LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
F+ M+ + T F NI I MCK ++ A + + G++PD VT+N++ID + +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
D E MK+ PDVI+YN+L++ + G P+ L + +M + ++P+V S
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
Y+ L+ + + GM +A + + D + P+ TY +I+ CK G + +A + +
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVD-MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
+ G V+TY ALI+GLC A R EA L + AG PN ++ +++ + +
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
++ LE+L E++ +G D Y T + L ++ A + +M G++ + Y T+
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM-NSLG 402
+ YF+ G E L L+D++++ T ++I GLCK K +++AV + + + N G
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 403 FGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILV 445
N ++DGL K ++ A FE M V D YT L+
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 190/390 (48%), Gaps = 7/390 (1%)
Query: 109 AGCEVLERMKEAG--LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNI 166
A C+V + + P +++L S + G+ + F KM + P S N
Sbjct: 173 ADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNG 232
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
L+H + +LG D+ R FKD ++ A P+ TYN+MI+ +CK G V A +F ++ R
Sbjct: 233 LLHRFAKLGKTDDVKRFFKD-MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR 291
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
G VP+ +TYN++I+G K R ++ E ++ EP+ IT+ ++NC + G+L G
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
LE EM+ G + +Y T+V A K G + +A + M G+ P+ +Y ++I
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFN 406
+ G + +A L +++ + G + T+T +I GLC A+R+ EA + M++ G N
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 407 LVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLV 462
L + N ++ G KA ++DRAL+ ++ R D Y + LC + A +
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 463 ACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
+CG + ++D G E
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 197/452 (43%), Gaps = 46/452 (10%)
Query: 40 SKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLID 99
SK FR+ K RS N + K + D + D + G P V T+N +ID
Sbjct: 216 SKMKRFRVFPKTRSC-----NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMID 270
Query: 100 AYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRP 159
C+ +A + E MK GL PD ++YNS++ G + G T+ F++M + P
Sbjct: 271 CMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEP 330
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
DV TYN +IN CK G + L
Sbjct: 331 DV------------------------------------ITYNALINCFCKFGKLPIGLEF 354
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
+R ++ G P V++Y+ L++ CK +A + + R G PN T+T++++ +
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
G L + EM G ++ Y ++ L R+ EA+E+ +M + GV P+LAS
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
YN +I+ + + +D ALEL+++++ G D + I GLC +++ A ++ M
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD----SFTYTILVHNLCRARRFL 455
G N + ++D K+G+ L + M+ D T+ +L+ LC+ +
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 594
Query: 456 CASKHLVACL-QCGFQVLKATRRAVIDGLISD 486
A + G Q A A+IDGL D
Sbjct: 595 KAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 191/449 (42%), Gaps = 70/449 (15%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
+G T N I K +LD C + + PDV+T+N LI+ +C+F
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
G E MK GL P+V+SY++L+ ++G+ + + M + P+ ++Y L+
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 170 CYFRLGMPDEANRVFKDVLL----------------------------------SAETDP 195
++G +A R+ ++L +A P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
+ A+YN +I+G K + AL + L+ RG P++L Y I GLC + A+ ++
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 256 SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT 315
+E +E G + N++ +TT+M+ F+ G +GL +L EM+ +C ++ L K
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590
Query: 316 ------------------------------------GRVVEADEIAEQMMSNGVEPDLAS 339
+V A + EQM+ G+ PD +
Sbjct: 591 KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTA 650
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
Y +++ F+QG V EAL L D++ + G D +T ++ GL +L +A L+ M
Sbjct: 651 YTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI 710
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALK 428
G + V VL + G ID A++
Sbjct: 711 GEGIHPDEVLCISVLKKHYELGCIDEAVE 739
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 148/304 (48%), Gaps = 2/304 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I +C A+++ +AE + GV+P++ ++N LI + + + D E+L +K G+
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PD++ Y + + G + ++M E I+ + Y LM YF+ G P E
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR-GFVPEVLTYNALING 241
+ D + + + + T+ V+I+GLCKN V A+ F + G + A+I+G
Sbjct: 564 LL-DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
LCK + A L + + G P+ +T++M+ F+ G + + L + +M G D
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
AY ++V L ++ +A E+M+ G+ PD +++ ++ G +DEA+EL
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQS 742
Query: 362 QIEK 365
+ K
Sbjct: 743 YLMK 746
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 144/320 (45%), Gaps = 18/320 (5%)
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLS-AETD-------------PST 197
M + + V SY I+ H F M +AN V K+++LS A+ D P
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
++ + + L G + A+ F ++R P+ + N L++ K + ++ +R +
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 258 FREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGR 317
AG P T+ +++C + G +E + EM+ +G D Y +++ K GR
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 318 VVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI 377
+ + E+M EPD+ +YN +I + + G++ LE +++ G + +++
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 378 IIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF-EGMEV- 435
++ CK + +A++ M +G N ++D K G++ A + E ++V
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 436 --RDSFTYTILVHNLCRARR 453
+ TYT L+ LC A R
Sbjct: 433 VEWNVVTYTALIDGLCDAER 452
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 8/276 (2%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I KAK +D+A +L + G+ PD++ + T I C +A V+ MKE
Sbjct: 476 NALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 535
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH--CYFRL--G 175
G+ + + Y +LM + G LH+ D+M E +I V ++ +L+ C +L
Sbjct: 536 CGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSK 595
Query: 176 MPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTY 235
D NR+ D L A + A + MI+GLCK+ V A ++F + ++G VP+ Y
Sbjct: 596 AVDYFNRISNDFGLQA----NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 651
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
+L++G K EA L + E G + + + +T+++ C +L++ L EM
Sbjct: 652 TSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG 711
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
+G D +V+ + G + EA E+ +M +
Sbjct: 712 EGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 200/414 (48%), Gaps = 24/414 (5%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYC---RF----------- 104
NI I C +L + KLG PDVVTFNTL+ C R
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 105 -VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
F + ++M E GLTP VI++N+L++G +G + +KM+ + DV +
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
Y +++ ++G A + + P Y+ +I+ LCK+G+ +A +F +
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSK-MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
+G P V TYN +I+G C R ++A+RLL + E P+ +TF +++ + G+L
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
+ ++ EM + D Y +++ K R +A + + M S PD+ ++NT+
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTI 438
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
I +Y R RVDE ++L+ +I + G + T+ +IHG C+ LN A M S G
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARR 453
+ + N +L G + ++ AL+ FE +++ D+ Y I++H +C+ +
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 215/433 (49%), Gaps = 10/433 (2%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N I +C ++ +A ++ V G+ DVVT+ T+++ C+ + +L +M+
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
E + PDV+ Y++++ + G ++F +M+E I P+V++YN ++ + G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+A R+ +D ++ E +P T+N +I+ K G + A + + R P+ +TYN++
Sbjct: 349 DAQRLLRD-MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I G CK R ++A+ + + P+ +TF T+++ R R+++G+++L E+ +G
Sbjct: 408 IYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
+ Y T++ + + A ++ ++M+S+GV PD + N ++Y + +++EALE
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
L + I+ D + IIIHG+CK +++EA + G ++ N ++ G
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 419 KAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKA 474
I A F M+ D+ TY L+ +A + + + GF
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 475 TRRAVIDGLISDG 487
T + V D LI+DG
Sbjct: 644 TIKMVAD-LITDG 655
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 183/365 (50%), Gaps = 6/365 (1%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I +CK A+ + + ++ G+ P+V T+N +ID +C F + +L M E +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PDV+++N+L+S +V++G + D+M+ I PD +YN +++ + + D+A
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH 422
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+F D++ S P T+N +I+ C+ V + + R + RRG V TYN LI+G
Sbjct: 423 MF-DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
C+ N A+ L E G P+ IT ++ +LE+ LE+ ++ D
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
AY ++ + K +V EA ++ + +GVEPD+ +YN MI + + + +A L +
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
++ G D T+ +I G KA ++++++ + M S GF + V D L G
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGR 656
Query: 423 IDRAL 427
+D++
Sbjct: 657 LDKSF 661
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 159/329 (48%), Gaps = 5/329 (1%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
++ KG + + N I C + A+ +L D ++ + PDV+TFN LI A +
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
++ + M + PD ++YNS++ G + F HMFD M PDV ++N
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFN 436
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
++ Y R DE ++ +++ +T TYN +I+G C+ ++ A +F+ +
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLV-ANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQ 285
G P+ +T N L+ G C+ + EA L + + + + + + +++ + ++++
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 286 GLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIY 345
++ + G D Y +++ + +A+ + +M NG EPD ++YNT+I
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 346 LYFRQGRVDEALELVDQIEKEGPGNDQYT 374
+ G +D+++EL+ ++ G D +T
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 168/402 (41%), Gaps = 59/402 (14%)
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
F S D + + M + + N ++ VR + + ++ KM I +++S
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 164 YNILMHCY----------------FRLGM-PD---------------------------- 178
+NIL+ C+ +LG PD
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 179 -----EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
EA +F D ++ P T+N +INGLC G V A ++ + +G +V+
Sbjct: 204 ETGFLEAVALF-DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 234 TYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
TY ++NG+CK A LLS+ E +P+ + ++ +++ + G + +EM
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
KG + F Y ++ GR +A + M+ + PD+ ++N +I ++G++
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
EA +L D++ D T+ +I+G CK R ++A D M S ++V N +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTI 438
Query: 414 LDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRA 451
+D +A +D ++ + R ++ TY L+H C
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 37/253 (14%)
Query: 35 QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTF 94
+R+ + I +G +T N I C+ L+ A+ + + + GV PD +T
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
N L+ +C + E+ E ++ + + D ++YN ++ G + +F +
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVH 214
+ PDV +Y NVMI+G C +
Sbjct: 566 HGVEPDVQTY------------------------------------NVMISGFCGKSAIS 589
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
+A +F ++ G P+ TYN LI G KA +++ L+SE R G +A T V
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVA 649
Query: 275 NCCFRCGRLEQGL 287
+ GRL++
Sbjct: 650 D-LITDGRLDKSF 661
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 200/414 (48%), Gaps = 24/414 (5%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYC---RF----------- 104
NI I C +L + KLG PDVVTFNTL+ C R
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 105 -VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
F + ++M E GLTP VI++N+L++G +G + +KM+ + DV +
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
Y +++ ++G A + + P Y+ +I+ LCK+G+ +A +F +
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSK-MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
+G P V TYN +I+G C R ++A+RLL + E P+ +TF +++ + G+L
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
+ ++ EM + D Y +++ K R +A + + M S PD+ ++NT+
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTI 438
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
I +Y R RVDE ++L+ +I + G + T+ +IHG C+ LN A M S G
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARR 453
+ + N +L G + ++ AL+ FE +++ D+ Y I++H +C+ +
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 201/397 (50%), Gaps = 9/397 (2%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N I +C ++ +A ++ V G+ DVVT+ T+++ C+ + +L +M+
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
E + PDV+ Y++++ + G ++F +M+E I P+V++YN ++ + G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+A R+ +D ++ E +P T+N +I+ K G + A + + R P+ +TYN++
Sbjct: 349 DAQRLLRD-MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I G CK R ++A+ + + P+ +TF T+++ R R+++G+++L E+ +G
Sbjct: 408 IYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
+ Y T++ + + A ++ ++M+S+GV PD + N ++Y + +++EALE
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
L + I+ D + IIIHG+CK +++EA + G ++ N ++ G
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 419 KAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRA 451
I A F M+ D+ TY L+ +A
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 174/341 (51%), Gaps = 5/341 (1%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I +CK A+ + + ++ G+ P+V T+N +ID +C F + +L M E +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PDV+++N+L+S +V++G + D+M+ I PD +YN +++ + + D+A
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH 422
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+F D++ S P T+N +I+ C+ V + + R + RRG V TYN LI+G
Sbjct: 423 MF-DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
C+ N A+ L E G P+ IT ++ +LE+ LE+ ++ D
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
AY ++ + K +V EA ++ + +GVEPD+ +YN MI + + + +A L +
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
++ G D T+ +I G KA ++++++ + M S GF
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 195/437 (44%), Gaps = 10/437 (2%)
Query: 20 PAILNHENPITSF-LTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECV 78
P ++ I L R+ + + +++ KG + + MCK A +
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
L + + PDVV ++ +ID C+ + M E G+ P+V +YN ++ G
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
G + + MIE EI PDV ++N L+ + G EA ++ D +L P T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC-DEMLHRCIFPDTV 402
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
TYN MI G CK+ +A MF + P+V+T+N +I+ C+A+R +E +LL E
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
G N T+ T+++ L ++ EM S G D ++ + ++
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
EA E+ E + + ++ D +YN +I+ + +VDEA +L + G D T+ ++
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR-- 436
I G C +++A M G + N ++ G KAG ID++++ M
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Query: 437 --DSFTYTILVHNLCRA 451
D+FT + +CR
Sbjct: 639 SGDAFTIKMAEEIICRV 655
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 149/288 (51%), Gaps = 13/288 (4%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I CK + D A+ + L PDVVTFNT+ID YCR D G ++L +
Sbjct: 405 NSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GL + +YN+L+ G +F +MI + PD + NIL++ + +E
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A +F +V+ ++ D T YN++I+G+CK V A +F +L G P+V TYN +I
Sbjct: 521 ALELF-EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+G C ++A L + ++ GHEP+ T+ T++ C + G +++ +E+++EMRS G++
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLY 347
D F T+ A RV + E+++ N + P + + I Y
Sbjct: 640 GDAF---TIKMAEEIICRVSD-----EEIIENYLRPKINGETSSIPRY 679
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 168/402 (41%), Gaps = 59/402 (14%)
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
F S D + + M + + N ++ VR + + ++ KM I +++S
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 164 YNILMHCY----------------FRLGM-PD---------------------------- 178
+NIL+ C+ +LG PD
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 179 -----EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
EA +F D ++ P T+N +INGLC G V A ++ + +G +V+
Sbjct: 204 ETGFLEAVALF-DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 234 TYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
TY ++NG+CK A LLS+ E +P+ + ++ +++ + G + +EM
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
KG + F Y ++ GR +A + M+ + PD+ ++N +I ++G++
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
EA +L D++ D T+ +I+G CK R ++A D M S ++V N +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTI 438
Query: 414 LDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRA 451
+D +A +D ++ + R ++ TY L+H C
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 147/328 (44%), Gaps = 20/328 (6%)
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+ FD M+ S N ++ + R+ PD A +++ + + + ++N++I
Sbjct: 91 IDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR-RIPLNIYSFNILIK 149
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL---------- 255
C + +LS F L + GF P+V+T+N L++GLC R +EA L
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE 209
Query: 256 -----SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVA 310
+ E G P ITF T++N GR+ + ++ +M KG D Y T+V
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
+ K G A + +M ++PD+ Y+ +I + G +A L ++ ++G
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
+ +T+ +I G C R ++A + L M +++ N ++ K G + A K
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 431 EGMEVR----DSFTYTILVHNLCRARRF 454
+ M R D+ TY +++ C+ RF
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 222/486 (45%), Gaps = 42/486 (8%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAY--------- 101
G ++ LNI + ++CK +++K L + GV PD+VT+NTLI AY
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 102 --------------------------CRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSG 135
C+ ++ EV M +GL+PD +Y SL+
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 136 AVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDP 195
A +KG T +F M ++ PD+ ++ +M + R G D+A F V A P
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK-EAGLIP 408
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
Y ++I G C+ G + A+++ + ++G +V+TYN +++GLCK + EA +L
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 256 SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT 315
+E E P++ T T +++ + G L+ +E+ +M+ K D Y T++ K
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 316 GRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTH 375
G + A EI M+S + P SY+ ++ +G + EA + D++ +
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 376 TIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME- 434
+I G C++ ++ L+ M S GF + ++ N ++ G + ++ +A + ME
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 435 -----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLK 489
V D FTY ++H CR + A L ++ G ++T +I+G +S
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 490 NEAKKV 495
EA ++
Sbjct: 709 TEAFRI 714
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 197/399 (49%), Gaps = 3/399 (0%)
Query: 40 SKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLID 99
+K V ++ G S + + CK + + E V D V+PD+V F++++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 100 AYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRP 159
+ R + D +KEAGL PD + Y L+ G RKG+ + +++ ++M++
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
DV +YN ++H + M EA+++F ++ A P + T ++I+G CK G + NA+ +
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERA-LFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
F+ ++ + +V+TYN L++G K + A+ + ++ P I+++ ++N
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
G L + + EM SK +++ ++G + + E+M+S G PD S
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPG--NDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
YNT+IY + R+ + +A LV ++E+E G D +T+ I+HG C+ ++ EA L
Sbjct: 623 YNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRK 682
Query: 398 MNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR 436
M G + C+++G ++ A + + M R
Sbjct: 683 MIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 183/395 (46%), Gaps = 5/395 (1%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
++ I + +A++L +A G + N LI + R + V + +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
+G+ +V + N +++ + G ++ E + PD+ +YN L+ Y G+ +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
EA + + + P TYN +INGLCK+G A +F + R G P+ TY +L
Sbjct: 288 EAFELM-NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
+ CK E ++ S+ R P+ + F+++M+ R G L++ L ++ G
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
D Y ++ + G + A + +M+ G D+ +YNT+++ ++ + EA +
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
L +++ + D YT TI+I G CK L A++ M ++V N +LDG G
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 419 KAGHIDRALKFFEGMEVRD----SFTYTILVHNLC 449
K G ID A + + M ++ +Y+ILV+ LC
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 165/345 (47%), Gaps = 5/345 (1%)
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ 224
N L+ R+G + A V++++ S + T N+M+N LCK+G + + +Q
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSG-VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262
Query: 225 RRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLE 284
+G P+++TYN LI+ EA L++ G P T+ TV+N + G+ E
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 285 QGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
+ E+ EM G + D Y +++ K G VVE +++ M S V PDL +++M+
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 345 YLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFG 404
L+ R G +D+AL + +++ G D +TI+I G C+ ++ A+ + M G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 405 FNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKH 460
++V N +L GL K + A K F M R DS+T TIL+ C+ A +
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 461 LVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQLL 505
+ ++ T ++DG G + AK++ + ++L
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 161/336 (47%), Gaps = 13/336 (3%)
Query: 9 LHFNAAYPFTHPAILNHENPITSFLTQ------RITHSKNVTFRIMVKGRSLSTKFLNIC 62
++FN+ A L +N I + L Q I+ + N+ ++ +G ++ N
Sbjct: 396 MYFNSV----KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ +CK K L +A+ + + + + PD T LID +C+ + E+ ++MKE +
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
DV++YN+L+ G + G ++ M+ EI P SY+IL++ G EA R
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
V+ D ++S P+ N MI G C++G + S + GFVP+ ++YN LI G
Sbjct: 572 VW-DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630
Query: 243 CKARRANEARRLLSEFRE--AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
+ ++A L+ + E G P+ T+ ++++ R ++++ +L +M +G
Sbjct: 631 VREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPD 336
D Y ++ V + EA I ++M+ G PD
Sbjct: 691 DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 135/302 (44%), Gaps = 4/302 (1%)
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
+ ++++I + + A F L+ +GF + NALI L + A + E
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 258 FREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGR 317
+G N T ++N + G++E+ L++++ KG D Y T+++A G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 318 VVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI 377
+ EA E+ M G P + +YNT+I + G+ + A E+ ++ + G D T+
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 378 IIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME--- 434
++ CK + E + M S +LV + ++ ++G++D+AL +F ++
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 435 -VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAK 493
+ D+ YTIL+ CR A LQ G + T ++ GL + EA
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 494 KV 495
K+
Sbjct: 466 KL 467
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 108/263 (41%), Gaps = 25/263 (9%)
Query: 263 HEPN----AITFTTVMNCCFRCGRLEQGLEILTEM-RSKGYT-------FDG-FAYC--- 306
H PN +++ + +++ R GRL L M R G + D F+ C
Sbjct: 105 HFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSN 164
Query: 307 -----TVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
++ V+ ++ EA E + S G + + N +I R G V+ A +
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 362 QIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
+I + G G + YT I+++ LCK ++ + L + G ++V N ++ G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 422 HIDRALKFFEGMEVRD----SFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRR 477
++ A + M + +TY +++ LC+ ++ A + L+ G T R
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 478 AVIDGLISDGLKNEAKKVRLKIR 500
+++ G E +KV +R
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMR 367
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 218/444 (49%), Gaps = 14/444 (3%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N ++ +CK Q+ AE ++ + G PDV+++N+LID +CR + VLE ++
Sbjct: 59 FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 119 EAG---LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
+ PD++S+NSL +G + + M++ P+V +Y+ + + + G
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSG 177
Query: 176 MPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTY 235
A + F + A + P+ T+ +I+G CK G + A+S+++ ++R V+TY
Sbjct: 178 ELQLALKSFHSMKRDALS-PNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
ALI+G CK A + S E EPN++ +TT+++ F+ G + ++ L +M +
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDE 355
+G D AY +++ L G++ EA EI E M + + PD+ + TM+ YF+ GR+
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 356 ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD 415
A+ + ++ + G D + +I G+ K +L+EA+ + + N V ++D
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA-----NDVMYTVLID 411
Query: 416 GLGKAGHIDRALKFF----EGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQV 471
L K G + F E V D F YT + LC+ + A K +Q G +
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL 471
Query: 472 LKATRRAVIDGLISDGLKNEAKKV 495
+I GL S GL EA++V
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQV 495
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 197/424 (46%), Gaps = 8/424 (1%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
V G P +FN+++ C+ +++ M G PDVISYNSL+ G R G
Sbjct: 48 VSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDI 107
Query: 143 PMTLHMFDKMIESE---IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTAT 199
+ + + S +PD+ S+N L + + ++ M DE V+ V+L P+ T
Sbjct: 108 RSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEV-FVYMGVMLKC-CSPNVVT 165
Query: 200 YNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR 259
Y+ I+ CK+G + AL F +++R P V+T+ LI+G CKA A L E R
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 260 EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVV 319
N +T+T +++ + G +++ E+ + M + Y T++ + G
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIII 379
A + +M++ G+ D+ +Y +I G++ EA E+V+ +EK D T ++
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSF 439
+ K+ R+ AV + GF ++VA + ++DG+ K G + A+ +F +E +
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-CIEKANDV 404
Query: 440 TYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKI 499
YT+L+ LC+ F+ + + G K + I GL G N +LK
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG--NLVDAFKLKT 462
Query: 500 RKAQ 503
R Q
Sbjct: 463 RMVQ 466
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 193/417 (46%), Gaps = 6/417 (1%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVL 79
P I++ + F ++ V +M+K S + + I + CK+ +L A
Sbjct: 127 PDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSF 186
Query: 80 IDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRK 139
+ + P+VVTF LID YC+ + + + M+ ++ +V++Y +L+ G +K
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246
Query: 140 GLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTAT 199
G M+ +M+E + P+ Y ++ +F+ G D A + +L TA
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITA- 305
Query: 200 YNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR 259
Y V+I+GLC NG + A + ++++ VP+++ + ++N K+ R A + +
Sbjct: 306 YGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLI 365
Query: 260 EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVV 319
E G EP+ + +T+++ + G+L + + ++ + Y ++ AL K G +
Sbjct: 366 ERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA-----NDVMYTVLIDALCKEGDFI 420
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIII 379
E + + ++ G+ PD Y + I +QG + +A +L ++ +EG D +T +I
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR 436
+GL + EA Q D M + G + + ++ K G++ A M+ R
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRR 537
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 123/282 (43%), Gaps = 41/282 (14%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G+ D+ + +I C E++E M+++ L PD++ + ++M+ + G
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
++M+ K+IE PDV + + ++ + G EA ++ + Y V+I+
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA------IVYFCIEKANDVMYTVLID 411
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
LCK G +F + G VP+ Y + I GLCK
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ-------------------- 451
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
G L ++ T M +G D AY T++ L G +VEA ++
Sbjct: 452 ---------------GNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVF 496
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
++M+++G+ PD A ++ +I Y ++G + A +L+ +++ G
Sbjct: 497 DEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 140/320 (43%), Gaps = 12/320 (3%)
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
P T N I+ L + +L L RG+ P ++N++++ +CK + A +
Sbjct: 19 PDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDI 78
Query: 255 LSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR-SKGYTF--DGFAYCTVVAA 311
+ G EP+ I++ ++++ R G + +L +R S G+ D ++ ++
Sbjct: 79 VHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNG 138
Query: 312 LVKTGRVVEADEIAEQM--MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPG 369
K + DE+ M M P++ +Y+T I + + G + AL+ ++++
Sbjct: 139 FSKMKML---DEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALS 195
Query: 370 NDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKF 429
+ T T +I G CKA L AV M + N+V ++DG K G + RA +
Sbjct: 196 PNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEM 255
Query: 430 FEGM-EVR---DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLIS 485
+ M E R +S YT ++ + A K L L G ++ +I GL
Sbjct: 256 YSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCG 315
Query: 486 DGLKNEAKKVRLKIRKAQLL 505
+G EA ++ + K+ L+
Sbjct: 316 NGKLKEATEIVEDMEKSDLV 335
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 20/259 (7%)
Query: 250 EARRLLSEFREAGHEPNAIT----FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAY 305
EA + LS R++ + P+ T ++N CG L L+ L + S+GYT ++
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINS--NCGILS--LKFLAYLVSRGYTPHRSSF 59
Query: 306 CTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEK 365
+VV+ + K G+V A++I M G EPD+ SYN++I + R G + A LV + +
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA-SLVLESLR 118
Query: 366 EGPG----NDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
G D + + +G K K L+E ++ M N+V + +D K+G
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCC-SPNVVTYSTWIDTFCKSG 177
Query: 422 HIDRALKFFEGMEVRDSF-----TYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATR 476
+ ALK F M+ RD+ T+T L+ C+A A + + T
Sbjct: 178 ELQLALKSFHSMK-RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 477 RAVIDGLISDGLKNEAKKV 495
A+IDG G A+++
Sbjct: 237 TALIDGFCKKGEMQRAEEM 255
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 243/508 (47%), Gaps = 34/508 (6%)
Query: 15 YPFTHPAILNHENPITSFLTQRITHSKNVTFRIMVK-GRSLSTKFLNICIASMCKAKQLD 73
+P P++ + + S + +R + ++ MV G + T N+ I ++C + +D
Sbjct: 105 FPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVD 164
Query: 74 KAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLM 133
A + + + G P+ TF L+ YC+ D G E+L M+ G+ P+ + YN+++
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 134 SGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLS--- 190
S R+G + M +KM E + PD+ ++N + + G +A+R+F D+ L
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 191 AETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANE 250
P++ TYN+M+ G CK G + +A ++F +++ + + +YN + GL + + E
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344
Query: 251 ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVA 310
A +L + + G P+ ++ +M+ + G L I+ M+ G D Y ++
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLH 404
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
G+V A + ++MM N P+ + N +++ ++ GR+ EA EL+ ++ ++G G
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHM--------NSLGFGF------NLVASNC---- 412
D T II+ GLC + L++A++ + M +LG + +L+ +NC
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524
Query: 413 -----VLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVA 463
+L+GL KAG A F M DS Y I +H+ C+ + A + L
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 464 CLQCGFQVLKATRRAVIDGLISDGLKNE 491
+ G T ++I GL G+KN+
Sbjct: 585 MEKKGCHKSLETYNSLILGL---GIKNQ 609
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 210/465 (45%), Gaps = 29/465 (6%)
Query: 55 STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVL 114
S + NI + + + + +AE VL G+ P + ++N L+D C+ ++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 115 ERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRL 174
MK G+ PD ++Y L+ G G + +M+ + P+ ++ NIL+H +++
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 175 GMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF------ 228
G EA + + + T T N++++GLC +G + A+ + + ++ G
Sbjct: 445 GRISEAEELLRK-MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503
Query: 229 -----------------VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
+P+++TY+ L+NGLCKA R EA+ L +E +P+++ +
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
++ + G++ +L +M KG Y +++ L ++ E + ++M
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
G+ P++ +YNT I +V++A L+D++ ++ + ++ +I CK + A
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHN 447
+ + S+ G + + + L AG + +A + E + R +F Y LV +
Sbjct: 684 QEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVES 742
Query: 448 LCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
LC+ AS L + G+ A VIDGL G K EA
Sbjct: 743 LCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 175/385 (45%), Gaps = 9/385 (2%)
Query: 124 PDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRV 183
P V YN L+ +++ ++ M+ I P +++N+L+ D A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 184 FKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLC 243
F D + P+ T+ +++ G CK G L + ++ G +P + YN +++ C
Sbjct: 170 F-DEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 244 KARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF--- 300
+ R +++ +++ + RE G P+ +TF + ++ + G++ I ++M Y
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 301 -DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ Y ++ K G + +A + E + N L SYN + R G+ EA +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+ Q+ +G G Y++ I++ GLCK L++A + M G + V C+L G
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 420 AGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKAT 475
G +D A + M + +++T IL+H+L + R A + L + G+ + T
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 476 RRAVIDGLISDGLKNEAKKVRLKIR 500
++DGL G ++A ++ +R
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMR 493
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 173/390 (44%), Gaps = 25/390 (6%)
Query: 67 CKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDV 126
C ++D A+ +L + ++ LP+ T N L+ + + E+L +M E G D
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDT 466
Query: 127 ISYNSLMSGAVRKGLFPMTLHMF-----------------------DKMIESEIRPDVWS 163
++ N ++ G G + + D +IE+ PD+ +
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLIT 526
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
Y+ L++ + G EA +F + ++ + P + YN+ I+ CK G + +A + +++
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAE-MMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
+++G + TYN+LI GL + E L+ E +E G PN T+ T + ++
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
E +L EM K + F++ ++ A K A E+ E +S + + Y+ M
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE-GLYSLM 704
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
G++ +A EL++ + G + + ++ LCK L A L M G+
Sbjct: 705 FNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
GF+ A V+DGLGK G+ A F + M
Sbjct: 765 GFDPAALMPVIDGLGKMGNKKEANSFADKM 794
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 149/377 (39%), Gaps = 88/377 (23%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
RI+ ++ + ++ KG L T NI + +C + +LDKA I+ VK +
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA----IEIVKGMRVHGSAALG 501
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
L ++Y V + + E PD+I+Y++L++G + G F ++F +M+
Sbjct: 502 NLGNSYIGLVD--------DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLL-----SAET----------------- 193
+++PD +YNI +H + + G A RV KD+ S ET
Sbjct: 554 KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI 613
Query: 194 ------------DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
P+ TYN I LC+ V +A ++ + ++ P V ++ LI
Sbjct: 614 HGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673
Query: 242 LCK----------------------------------ARRANEARRLLSEFREAGHEPNA 267
CK A + +A LL + G E
Sbjct: 674 FCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGT 733
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
+ ++ + LE IL +M +GY FD A V+ L K G EA+ A++
Sbjct: 734 FLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADK 793
Query: 328 MM--------SNGVEPD 336
MM +N V+P+
Sbjct: 794 MMEMASVGEVANKVDPN 810
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 217/444 (48%), Gaps = 13/444 (2%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + +M K +L + +L+D K G++P+ VT+N L+ YC+ S +++E MK+
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
+ PD+ +YN L++G G L + D M +++PDV +YN L+ F LG+ E
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 180 ANRVFKDVLLSAETDPSTA---TYNVMINGLCKNGYVHNALSMFRNL-QRRGFVPEVLTY 235
A ++ + + E D A T+N+ + LCK + L GF P+++TY
Sbjct: 364 ARKLMEQM----ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY 419
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
+ LI K + A ++ E + G + N IT T+++ + +L++ +L
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK 479
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDE 355
+G+ D Y T++ + +V +A E+ ++M + P ++++N++I G+ +
Sbjct: 480 RGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTEL 539
Query: 356 ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD 415
A+E D++ + G D T II G CK R+ +A + + F + N +L+
Sbjct: 540 AMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 416 GLGKAGHIDRALKFF----EGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQV 471
GL K G ++AL FF E EV D+ TY ++ C+ ++ A L + G +
Sbjct: 600 GLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEP 658
Query: 472 LKATRRAVIDGLISDGLKNEAKKV 495
+ T + I L+ DG +E ++
Sbjct: 659 DRFTYNSFISLLMEDGKLSETDEL 682
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/520 (21%), Positives = 227/520 (43%), Gaps = 67/520 (12%)
Query: 14 AYPFTHPAILNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLD 73
A+P P P+ S + ++H K +SL ++ AS+ L
Sbjct: 72 AFPSDSPL------PLISVVRSLLSHHK------FADAKSLLVSYIRTSDASLSLCNSL- 118
Query: 74 KAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLM 133
L + L P F+ + AY ++ ++M L P++++ N+L+
Sbjct: 119 -----LHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLL 173
Query: 134 SGAVRKGLFPMTL------HMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV 187
G VR +P + +FD M++ + +V ++N+L++ Y G ++A + + +
Sbjct: 174 IGLVR---YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERM 230
Query: 188 LLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARR 247
+ + +P TYN ++ + K G + + + ++++ G VP +TYN L+ G CK
Sbjct: 231 VSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGS 290
Query: 248 ANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCT 307
EA +++ ++ P+ T+ ++N G + +GLE++ M+S D Y T
Sbjct: 291 LKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNT 350
Query: 308 VVAALVKTGRVVEADEIAEQMMSNGVE--------------------------------- 334
++ + G +EA ++ EQM ++GV+
Sbjct: 351 LIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410
Query: 335 ---PDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
PD+ +Y+T+I Y + G + ALE++ ++ ++G + T I+ LCK ++L+EA
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHN 447
L+ + GF + V ++ G + +++AL+ ++ M+ T+ L+
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 448 LCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
LC + A + + G +T ++I G +G
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG 570
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 132/247 (53%), Gaps = 2/247 (0%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG ++T LN + ++CK ++LD+A +L K G + D VT+ TLI + R +
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
E+ + MK+ +TP V ++NSL+ G G + + FD++ ES + PD ++N ++
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
Y + G ++A + + + + P T N+++NGLCK G AL+ F L V
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHS-FKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV 623
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
+ +TYN +I+ CK ++ EA LLSE E G EP+ T+ + ++ G+L + E+
Sbjct: 624 -DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL 682
Query: 290 LTEMRSK 296
L + K
Sbjct: 683 LKKFSGK 689
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 148/304 (48%), Gaps = 3/304 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKL-GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
NI + +CK ++ + + + V + G PD+VT++TLI AY + E++ M
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
+ G+ + I+ N+++ ++ ++ + + D +Y L+ +FR +
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+A ++ D + + P+ +T+N +I GLC +G A+ F L G +P+ T+N++
Sbjct: 504 KALEMW-DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSI 562
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I G CK R +A +E + +P+ T ++N + G E+ L + +
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE-R 621
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
D Y T+++A K ++ EA ++ +M G+EPD +YN+ I L G++ E E
Sbjct: 622 EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDE 681
Query: 359 LVDQ 362
L+ +
Sbjct: 682 LLKK 685
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 220/446 (49%), Gaps = 8/446 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
+I I C+ QL A VL +KLG PD+VT ++L++ YC ++++M E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G PD ++ +L+ G + + D+M++ +PD+ +Y +++ + G D
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + + +A + +N +I+ LCK +V A+ +F ++ +G P V+TYN+LI
Sbjct: 242 ALNLLNK-MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
N LC R ++A RLLS E PN +TF +++ F+ G+L + ++ EM +
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D Y ++ R+ EA ++ + M+S P++ +YNT+I + + RV++ +EL
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
++ + G + T+T II G +A + A M S +++ + +L GL
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 420 AGHIDRALKFFEGMEVRDS----FTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKAT 475
G +D AL F+ ++ + F Y ++ +C+A + + + L L V+ T
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK-VGEAWDLFCSLSIKPDVV--T 537
Query: 476 RRAVIDGLISDGLKNEAKKVRLKIRK 501
+I GL S L EA + K+++
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKE 563
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 203/408 (49%), Gaps = 7/408 (1%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
V+ G PD+VT+ T+++ C+ D +L +M+ A + +V+ +N+++ +
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
+ + +F +M IRP+V +YN L++C G +A+R+ + +L + +P+ T+N
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN-MLEKKINPNVVTFNA 333
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+I+ K G + A + + +R P+ +TYN LING C R +EA+++
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
PN T+ T++N +C R+E G+E+ EM +G + Y T++ + G A
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+ +QM+SN V D+ +Y+ +++ G++D AL + ++K + + + +I G+
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGM 513
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYT 442
CKA ++ EA D SL ++V N ++ GL + A F M+ + +
Sbjct: 514 CKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570
Query: 443 ILVHNLCRARRFLC---ASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
+ L RA C AS L+ ++ V A+ +++ ++ DG
Sbjct: 571 GTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDG 618
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 192/419 (45%), Gaps = 42/419 (10%)
Query: 71 QLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYN 130
++D A + D VK P +V FN L+ A + F+ + E+M+ G++ D+ +Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 131 SLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLS 190
++ R+ + L + KM++ PD+ + + L++ Y +A D ++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA-VALVDQMVE 181
Query: 191 AETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKA----- 245
P T T+ +I+GL + A+++ + +RG P+++TY ++NGLCK
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 246 ------------------------------RRANEARRLLSEFREAGHEPNAITFTTVMN 275
R A L +E G PN +T+ +++N
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 276 CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
C GR +L+ M K + + ++ A K G++VEA+++ E+M+ ++P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 336 DLASYNTMIYLYFRQGRVDEALELVD-QIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQH 394
D +YN +I + R+DEA ++ + K+ N Q T+ +I+G CK KR+ + V+
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ-TYNTLINGFCKCKRVEDGVEL 420
Query: 395 LDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLC 449
M+ G N V ++ G +AG D A F+ M D TY+IL+H LC
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 127/276 (46%), Gaps = 5/276 (1%)
Query: 225 RRGFVPEVLTYNALI-NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
R F Y ++ N L + ++A L + ++ P+ + F +++ + +
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
E + + +M++ G + D + Y + + ++ A + +MM G EPD+ + +++
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
+ Y R+ +A+ LVDQ+ + G D +T T +IHGL + +EAV +D M G
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGMEV----RDSFTYTILVHNLCRARRFLCASK 459
+LV V++GL K G ID AL ME + + ++ +LC+ R A
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 460 HLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
G + T ++I+ L + G ++A ++
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I +A D A+ V V V D++T++ L+ C + D + + ++++ +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
++ YN+++ G + G +F + I+PDV +YN ++ + EA+
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+F+ + T P++ TYN +I ++ + + + ++ GFV + T + + N L
Sbjct: 557 LFRK-MKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Query: 243 CKARRANEARRLLS 256
R +LS
Sbjct: 616 HDGRLDKSFLNMLS 629
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 188/393 (47%), Gaps = 17/393 (4%)
Query: 66 MCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPD 125
+C A + +KA V+ + + G +PD T++ +++ C + + E MK GL D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 126 VISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFK 185
V +Y ++ + GL F++M E P+V +Y L+H Y + AN +F
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF- 576
Query: 186 DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEV------------- 232
+ +LS P+ TY+ +I+G CK G V A +F + VP+V
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 233 ---LTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
+TY AL++G CK+ R EAR+LL G EPN I + +++ + G+L++ E+
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
TEM G+ + Y +++ K R A ++ +M+ N P++ Y MI +
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
G+ DEA +L+ +E++G + T+T +I G ++ ++ L+ M S G N V
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 410 SNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYT 442
++D K G +D A E M+ T+T
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 200/436 (45%), Gaps = 40/436 (9%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
I + S CKA +++A + ++G P+VVT+ LI AY + E+ E M
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G P++++Y++L+ G + G +F++M S+ PDV YF+ D
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDV-------DMYFK-QYDDN 633
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
+ R P+ TY +++G CK+ V A + + G P + Y+ALI
Sbjct: 634 SER------------PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+GLCK + +EA+ + +E E G T++++++ F+ R + ++L++M
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ Y ++ L K G+ EA ++ + M G +P++ +Y MI + G+++ LEL
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
++++ +G + T+ ++I CK L+ A L+ M + + V++G K
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 861
Query: 420 AGHIDRALKFFEGMEVRDSF----------TYTILVHNLCRARRFLCASKHL--VACLQC 467
+F E + + D Y +L+ NL +A+R A + L VA
Sbjct: 862 --------EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913
Query: 468 GFQVLKATRRAVIDGL 483
+T ++I+ L
Sbjct: 914 TLVDYSSTYNSLIESL 929
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 217/497 (43%), Gaps = 38/497 (7%)
Query: 39 HSKNVTFRIMVK--GRSLSTKF------LNICIASMCKAKQLDKAECVLIDGVKLGVLPD 90
H +N +F I ++ GR +F N I + KA +LD A + + + D
Sbjct: 210 HCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 269
Query: 91 VVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFD 150
T + C+ + E L ++ PD + Y L+SG LF + +
Sbjct: 270 GFTLRCFAYSLCKVGKWR---EALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326
Query: 151 KMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKN 210
+M + P+V +Y+ L+ RV +++ PS +N +++ C +
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG-CYPSPKIFNSLVHAYCTS 385
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRA------NEARRLLSEFREAGHE 264
G A + + + + G +P + YN LI +C + + + A + SE AG
Sbjct: 386 GDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
N I ++ C G+ E+ ++ EM +G+ D Y V+ L ++ A +
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
E+M G+ D+ +Y M+ + + G +++A + +++ + G + T+T +IH K
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM----------- 433
AK+++ A + + M S G N+V + ++DG KAG +++A + FE M
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 434 ---------EVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLI 484
E + TY L+ C++ R A K L A G + + A+IDGL
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 485 SDGLKNEAKKVRLKIRK 501
G +EA++V+ ++ +
Sbjct: 686 KVGKLDEAQEVKTEMSE 702
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 175/396 (44%), Gaps = 38/396 (9%)
Query: 43 VTFRIMVKGRSLSTKFLNIC--IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDA 100
VT+ ++ G + + C MC +K + + P+VVT+ L+D
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 648
Query: 101 YCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPD 160
+C+ + ++L+ M G P+ I Y++L+ G + G + +M E
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708
Query: 161 VWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMF 220
+++Y+ L+ YF++ D A++V +L P+ Y MI+GLCK G A +
Sbjct: 709 LYTYSSLIDRYFKVKRQDLASKVLSK-MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 221 RNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRC 280
+ ++ +G P V+TY A+I+G + LL G PN +T+ +++ C +
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827
Query: 281 GRLEQGLEILTEMR-------SKGY--TFDGF------------------------AYCT 307
G L+ +L EM+ + GY +GF Y
Sbjct: 828 GALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRL 887
Query: 308 VVAALVKTGRVVEADEIAEQMMS-NGVEPDLAS-YNTMIYLYFRQGRVDEALELVDQIEK 365
++ L+K R+ A + E++ + + D +S YN++I +V+ A +L ++ K
Sbjct: 888 LIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK 947
Query: 366 EGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
+G + + +I GL + +++EA+ LD ++ +
Sbjct: 948 KGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 983
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 155/332 (46%), Gaps = 5/332 (1%)
Query: 34 TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVT 93
+ R+ ++ + + ++G + + I +CK +LD+A+ V + + G + T
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
+++LID Y + D +VL +M E P+V+ Y ++ G + G + M
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
E +P+V +Y ++ + +G + + + + S P+ TY V+I+ CKNG +
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLER-MGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
A ++ +++ + Y +I G K E+ LL E + P + +
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLL 888
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFA--YCTVVAALVKTGRVVEADEIAEQMMSN 331
++ + RLE L +L E+ + T ++ Y +++ +L +V A ++ +M
Sbjct: 889 IDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 948
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQI 363
GV P++ S+ ++I FR ++ EAL L+D I
Sbjct: 949 GVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 130/343 (37%), Gaps = 42/343 (12%)
Query: 201 NVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL------ 254
NV++ C+NG AL L+ F P TYN LI KA R + A +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 255 -------------------LSEFREA-------GHEPNAITFTTVMNCCFRCGRLEQGLE 288
+ ++REA P+ + +T +++ E+ ++
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMD 323
Query: 289 ILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYF 348
L MR+ + Y T++ + ++ + MM G P +N++++ Y
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 349 RQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR------LNEAVQHLDHMNSLG 402
G A +L+ ++ K G + I+I +C K L+ A + M + G
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAG 443
Query: 403 FGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCAS 458
N + + L AG ++A M + D+ TY+ +++ LC A + A
Sbjct: 444 VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAF 503
Query: 459 KHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRK 501
+ G T ++D GL +A+K ++R+
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 190/380 (50%), Gaps = 2/380 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI + +C + Q +A C L +KLG PD+VTF +L++ YC + + + +++
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G P+V++Y +L+ + + +F++M + RP+V +YN L+ +G +
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + +D ++ +P+ T+ +I+ K G + A ++ + + P+V TY +LI
Sbjct: 242 AAWLLRD-MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
NGLC +EAR++ G PN + +TT+++ + R+E G++I EM KG
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ Y ++ GR A E+ QM S PD+ +YN ++ G+V++AL +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+ + K + T+TIII G+CK ++ +A + S G N++ ++ G +
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 420 AGHIDRALKFFEGMEVRDSF 439
G I A F+ M+ D F
Sbjct: 481 RGLIHEADSLFKKMK-EDGF 499
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 207/428 (48%), Gaps = 17/428 (3%)
Query: 88 LPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLM------SGAVRKGL 141
LP ++ F L+ + +D + E+M+ G+ P + + N +M S R
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 142 FPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYN 201
F KM++ PD+ ++ L++ Y ++A +F D +L P+ TY
Sbjct: 140 F------LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALF-DQILGMGFKPNVVTYT 192
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
+I LCKN ++++A+ +F + G P V+TYNAL+ GLC+ R +A LL + +
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR 252
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
EPN ITFT +++ + G+L + E+ M D F Y +++ L G + EA
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHG 381
++ M NG P+ Y T+I+ + + RV++ +++ ++ ++G + T+T++I G
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 382 LCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS--- 438
C R + A + + M+S ++ N +LDGL G +++AL FE M R+
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 439 -FTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRL 497
TYTI++ +C+ + A + G + T +I G GL +EA +
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Query: 498 KIRKAQLL 505
K+++ L
Sbjct: 493 KMKEDGFL 500
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 135/281 (48%), Gaps = 1/281 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + +C+ + A +L D +K + P+V+TF LIDA+ + E+ M +
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
+ PDV +Y SL++G GL MF M + P+ Y L+H + + ++
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
++F + + +T TY V+I G C G A +F + R P++ TYN L+
Sbjct: 347 GMKIFYE-MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+GLC + +A + R+ + N +T+T ++ + G++E ++ + SKG
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASY 340
+ Y T+++ + G + EAD + ++M +G P+ + Y
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 210/459 (45%), Gaps = 5/459 (1%)
Query: 38 THSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTL 97
T + V R++++G S + + + + K + +D +L + LG+ P+V TF
Sbjct: 205 TEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTIC 264
Query: 98 IDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEI 157
I R + E+L+RM + G PDV++Y L+ +F+KM
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 158 RPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNAL 217
+PD +Y L+ + D + + ++ P T+ ++++ LCK G A
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTILVDALCKAGNFGEAF 383
Query: 218 SMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCC 277
++ +G +P + TYN LI GL + R ++A L G +P A T+ ++
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 278 FRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDL 337
+ G LE +M++KG + A + +L K GR EA +I + G+ PD
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 338 ASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
+YN M+ Y + G +DEA++L+ ++ + G D +I+ L KA R++EA +
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 398 MNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARR 453
M + +V N +L GLGK G I A++ FEGM + ++ T+ L LC+
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623
Query: 454 FLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
A K L + G T +I GL+ +G EA
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 193/375 (51%), Gaps = 3/375 (0%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGV-LPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
+ I ++C A++LD A+ V + +K G PD VT+ TL+D + D+ + M++
Sbjct: 298 VLIDALCTARKLDCAKEVF-EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G PDV+++ L+ + G F D M + I P++ +YN L+ R+ D+
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A +F + + S P+ TY V I+ K+G +AL F ++ +G P ++ NA +
Sbjct: 417 ALELFGN-MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
L KA R EA+++ ++ G P+++T+ +M C + G +++ +++L+EM G
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D +++ L K RV EA ++ +M ++P + +YNT++ + G++ EA+EL
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+ + ++G + T + LCK + A++ L M +G ++ N ++ GL K
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Query: 420 AGHIDRALKFFEGME 434
G + A+ FF M+
Sbjct: 656 NGQVKEAMCFFHQMK 670
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 192/410 (46%), Gaps = 3/410 (0%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIAS-MCKAKQLDKAECV 78
P ++ + I + T R F M GR + I + + LD +
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
+ K G +PDVVTF L+DA C+ +F + L+ M++ G+ P++ +YN+L+ G +R
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
L +F M ++P ++Y + + Y + G A F+ + + P+
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK-MKTKGIAPNIV 469
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
N + L K G A +F L+ G VP+ +TYN ++ K +EA +LLSE
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
E G EP+ I +++N ++ R+++ ++ M+ Y T++A L K G++
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
EA E+ E M+ G P+ ++NT+ + V AL+++ ++ G D +T+ I
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALK 428
I GL K ++ EA+ M L + + V +L G+ KA I+ A K
Sbjct: 650 IFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTLCTLLPGVVKASLIEDAYK 698
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 186/393 (47%), Gaps = 6/393 (1%)
Query: 19 HPAILNHENPITSFLTQR-ITHSKNVTFRIMVKG--RSLSTKFLNICIASMCKAKQLDKA 75
PA L E+ I S L + I ++ + + R++ G R + + I I CK + A
Sbjct: 710 QPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI-IRYSCKHNNVSGA 768
Query: 76 ECVLIDGVK-LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMS 134
+ K LGV P + T+N LI + +V ++K G PDV +YN L+
Sbjct: 769 RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLD 828
Query: 135 GAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD 194
+ G ++ +M E + ++NI++ + G D+A ++ D++ +
Sbjct: 829 AYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS 888
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
P+ TY +I+GL K+G ++ A +F + G P YN LING KA A+ A L
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 255 LSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK 314
+ G P+ T++ +++C GR+++GL E++ G D Y ++ L K
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 315 TGRVVEADEIAEQM-MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQY 373
+ R+ EA + +M S G+ PDL +YN++I G V+EA ++ ++I++ G + +
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVF 1068
Query: 374 THTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFN 406
T +I G + + A M + GF N
Sbjct: 1069 TFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 191/398 (47%), Gaps = 11/398 (2%)
Query: 114 LERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFR 173
L +M+E G + SYN L+ ++ + ++ +MI RP + +Y+ LM
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLM---VG 232
Query: 174 LGMPDEANRVFKDVLLSAET---DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVP 230
LG + + V +L ET P+ T+ + I L + G ++ A + + + G P
Sbjct: 233 LGKRRDIDSVM-GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGP 291
Query: 231 EVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEIL 290
+V+TY LI+ LC AR+ + A+ + + + H+P+ +T+ T+++ L+ +
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351
Query: 291 TEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQ 350
+EM G+ D + +V AL K G EA + + M G+ P+L +YNT+I R
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411
Query: 351 GRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVAS 410
R+D+ALEL +E G YT+ + I K+ A++ + M + G N+VA
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 411 NCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCASKHLVACLQ 466
N L L KAG A + F G++ V DS TY +++ + A K L ++
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 467 CGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQL 504
G + ++I+ L +EA K+ +++++ +L
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 199/448 (44%), Gaps = 45/448 (10%)
Query: 45 FRIMV-KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
F MV KG +T N +CK ++ A +L + +G +PDV T+NT+I +
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF-----------------PMTL 146
+MK+ + PD ++ +L+ G V+ L P L
Sbjct: 656 NGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANL 714
Query: 147 HMFDK----MIESEIRPDV-WSYNILMHCYFRLG----MP-----------DEANRVFKD 186
D + E+ I V +S ++ + R G +P A +F+
Sbjct: 715 FWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEK 774
Query: 187 VLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKAR 246
P TYN++I GL + + A +F ++ G +P+V TYN L++ K+
Sbjct: 775 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834
Query: 247 RANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTE-MRSKGYTFDGFAY 305
+ +E L E E N IT V++ + G ++ L++ + M + ++ Y
Sbjct: 835 KIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTY 894
Query: 306 CTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEK 365
++ L K+GR+ EA ++ E M+ G P+ A YN +I + + G D A L ++ K
Sbjct: 895 GPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVK 954
Query: 366 EGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDR 425
EG D T+++++ LC R++E + + + G ++V N +++GLGK+ ++
Sbjct: 955 EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 426 ALKFFEGMEVR-----DSFTYTILVHNL 448
AL F M+ D +TY L+ NL
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNL 1042
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I + K+ +L +A+ + + G P+ +N LI+ + + DA C + +RM + G+
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PD+ +Y+ L+ G LH F ++ ES + PDV YN++++ + +EA
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+F ++ S P TYN +I L G V A ++ +QR G P V T+NALI G
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
+ + A + G PN T+ + N
Sbjct: 1078 SLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 140/307 (45%), Gaps = 4/307 (1%)
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
MI +PD+ S + D + FK V + +T T N M+ L +G
Sbjct: 73 MIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDG 132
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
+ +F +Q+R + TY + L +A L + RE G NA ++
Sbjct: 133 KLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYN 192
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
+++ + + +E+ M +G+ Y +++ L K + + ++M +
Sbjct: 193 GLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL 252
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
G++P++ ++ I + R G+++EA E++ +++ EG G D T+T++I LC A++L+ A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHN 447
+ + M + + V +LD +D +F+ ME V D T+TILV
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 448 LCRARRF 454
LC+A F
Sbjct: 373 LCKAGNF 379
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 183/349 (52%), Gaps = 1/349 (0%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G P VVT+ LI+ Y + EV MKE G+ ++ +Y+ +++G V+ +
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+F+ M++ ++PDV YN ++ + +G D A + K+ + P+T T+ +I+
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE-MQKLRHRPTTRTFMPIIH 597
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
G K+G + +L +F ++R G VP V T+N LINGL + R+ +A +L E AG
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
N T+T +M G + E T ++++G D F Y ++ A K+GR+ A +
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
++M + + + YN +I + R+G V EA +L+ Q++KEG D +T+T I KA
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 386 KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
+N A Q ++ M +LG N+ ++ G +A ++AL +E M+
Sbjct: 778 GDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMK 826
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 164/382 (42%), Gaps = 36/382 (9%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
+I+ + V+ + +G + K ++ I K K A V D VK G+ PDV+ +N
Sbjct: 499 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 558
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
+I A+C + D + ++ M++ P ++ ++ G + G +L +FD M
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN 215
P V ++N L++ ++A + ++ L A + TY ++ G G
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL-AGVSANEHTYTKIMQGYASVGDTGK 677
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
A F LQ G ++ TY AL+ CK+
Sbjct: 678 AFEYFTRLQNEGLDVDIFTYEALLKACCKS------------------------------ 707
Query: 276 CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
GR++ L + EM ++ + F Y ++ + G V EA ++ +QM GV+P
Sbjct: 708 -----GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762
Query: 336 DLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHL 395
D+ +Y + I + G ++ A + ++++E G + T+T +I G +A +A+
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 822
Query: 396 DHMNSLGFGFNLVASNCVLDGL 417
+ M ++G + +C+L L
Sbjct: 823 EEMKAMGIKPDKAVYHCLLTSL 844
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 168/379 (44%), Gaps = 11/379 (2%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G+ P + +LI AY D + +MKE G+ +++Y+ ++ G + G
Sbjct: 339 GITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAA 398
Query: 146 LHMFD--KMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
+ FD K I + ++ I HC + + A + ++ + D A Y+ M
Sbjct: 399 DYWFDEAKRIHKTLNASIYGKIIYAHC--QTCNMERAEALVRE-MEEEGIDAPIAIYHTM 455
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
++G L +F+ L+ GF P V+TY LIN K + ++A + +E G
Sbjct: 456 MDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGV 515
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
+ N T++ ++N + + +M +G D Y +++A G + A +
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQ 575
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
++M P ++ +I+ Y + G + +LE+ D + + G +T +I+GL
Sbjct: 576 TVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 384 KAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF-----EGMEVRDS 438
+ +++ +AV+ LD M G N ++ G G +A ++F EG++V D
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV-DI 694
Query: 439 FTYTILVHNLCRARRFLCA 457
FTY L+ C++ R A
Sbjct: 695 FTYEALLKACCKSGRMQSA 713
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 138/331 (41%), Gaps = 39/331 (11%)
Query: 193 TDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEAR 252
+ PS + +M+ + G +H A F ++ RG P Y +LI+ R +EA
Sbjct: 305 SKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEAL 364
Query: 253 RLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAAL 312
+ + +E G E + +T++ ++ + G E E + T + Y ++ A
Sbjct: 365 SCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAH 424
Query: 313 VKTGRVVEADEIAEQMMSNGVEPDLASYNTM----------------------------- 343
+T + A+ + +M G++ +A Y+TM
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484
Query: 344 ------IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
I LY + G++ +ALE+ +++EG ++ T++++I+G K K A +
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 398 MNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEV----RDSFTYTILVHNLCRARR 453
M G +++ N ++ G++DRA++ + M+ + T+ ++H ++
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 454 FLCASKHLVACLQCGFQVLKATRRAVIDGLI 484
+ + +CG T +I+GL+
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 191/380 (50%), Gaps = 6/380 (1%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAG 110
G LS + ++ K + E V + ++ + P+V TFN +I+A C+ +
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 111 CEVLERMKEAGLTPDVISYNSLMSGAVR---KGLFPMTLHMFDKMIESEIRPDVWSYNIL 167
+V+E MK G +P+V+SYN+L+ G + G + +M+E+++ P++ ++NIL
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 168 MHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRG 227
+ +++ + +VFK+ +L + P+ +YN +INGLC G + A+SM + G
Sbjct: 303 IDGFWKDDNLPGSMKVFKE-MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 228 FVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGL 287
P ++TYNALING CK EA + + G P + +++ + G+++ G
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421
Query: 288 EILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLY 347
+ EM +G D Y ++A L + G + A ++ +Q+ S G+ PDL +++ ++ Y
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGY 480
Query: 348 FRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM-NSLGFGFN 406
R+G +A L+ ++ K G T+ I++ G CK L A M N
Sbjct: 481 CRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMN 540
Query: 407 LVASNCVLDGLGKAGHIDRA 426
+ + N +L G + G ++ A
Sbjct: 541 VASYNVLLQGYSQKGKLEDA 560
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 180/349 (51%), Gaps = 6/349 (1%)
Query: 34 TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCK---AKQLDKAECVLIDGVKLGVLPD 90
T ++ +++V + V G S + N I CK ++ KA+ VL + V+ V P+
Sbjct: 236 TGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPN 295
Query: 91 VVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFD 150
+ TFN LID + + + +V + M + + P+VISYNSL++G G + M D
Sbjct: 296 LTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRD 355
Query: 151 KMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKN 210
KM+ + ++P++ +YN L++ + + M EA +F V P+T YN++I+ CK
Sbjct: 356 KMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV-PTTRMYNMLIDAYCKL 414
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
G + + ++ ++R G VP+V TYN LI GLC+ A++L + G P+ +TF
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTF 473
Query: 271 TTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM-M 329
+M R G + +L EM G Y V+ K G + A + QM
Sbjct: 474 HILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
+ ++ASYN ++ Y ++G++++A L++++ ++G ++ T+ I+
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 196/440 (44%), Gaps = 45/440 (10%)
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
+ + L+ AY F+ G E +R G +S LM +++ +++ +
Sbjct: 154 IIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKE 213
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV------------------------ 187
MI +I+P+V+++N++++ + G ++A V +D+
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 188 -------------LLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLT 234
++ + P+ T+N++I+G K+ + ++ +F+ + + P V++
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 235 YNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
YN+LINGLC + +EA + + AG +PN IT+ ++N + L++ L++ ++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 295 SKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
+G Y ++ A K G++ + + E+M G+ PD+ +YN +I R G ++
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 355 EALELVDQIEKEG-PGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
A +L DQ+ +G P D T I++ G C+ +A L M+ +G + N V
Sbjct: 454 AAKKLFDQLTSKGLP--DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIV 511
Query: 414 LDGLGKAGHIDRALKFFEGMEVRDSF-----TYTILVHNLCRARRFLCASKHLVACLQCG 468
+ G K G++ A ME +Y +L+ + + A+ L L+ G
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Query: 469 FQVLKATRRAVIDGLISDGL 488
+ T V + ++ G
Sbjct: 572 LVPNRITYEIVKEEMVDQGF 591
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/348 (19%), Positives = 159/348 (45%), Gaps = 12/348 (3%)
Query: 112 EVLERMKEAGLTPDV-ISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS-YNILMH 169
E+ ++ + L PD+ + Y S + V+ ++L + K++ S +S +
Sbjct: 69 ELFRQLISSELDPDLCLRYYSWL---VKNSDISVSLELTFKLLHSLANAKRYSKIRSFLD 125
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
+ R G + + +F + + ++ ++++ N F+ G+
Sbjct: 126 GFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYK 185
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
L+ L+ L K R+ + + E +PN TF V+N + G++ + ++
Sbjct: 186 LSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVK---TGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
+ +M+ G + + +Y T++ K G++ +AD + ++M+ N V P+L ++N +I
Sbjct: 246 MEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG 305
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFN 406
+++ + ++++ ++ + + ++ +I+GLC +++EA+ D M S G N
Sbjct: 306 FWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPN 365
Query: 407 LVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCR 450
L+ N +++G K + AL F ++ V + Y +L+ C+
Sbjct: 366 LITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCK 413
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 24/279 (8%)
Query: 238 LINGLCKARRANEARRLLSEFREAG--HEPNAITFTTVM--NCCFRC------------- 280
L++ L A+R ++ R L F G H+ ++I M N C
Sbjct: 107 LLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANN 166
Query: 281 GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASY 340
R E G E GY + ++ AL+K R + + + ++M+ ++P++ ++
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTF 226
Query: 341 NTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK---AKRLNEAVQHLDH 397
N +I + G++++A ++++ ++ G + ++ +I G CK ++ +A L
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
Query: 398 MNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD----SFTYTILVHNLCRARR 453
M NL N ++DG K ++ ++K F+ M +D +Y L++ LC +
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 454 FLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
A + G Q T A+I+G + + EA
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 206/429 (48%), Gaps = 38/429 (8%)
Query: 105 VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY 164
+ FD + M ++ P ++ + +++ + F + ++++ KM I D++S+
Sbjct: 58 IKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 117
Query: 165 NILMHCYFR----------------LGM-PD------------EANRVFKDVLLSAETD- 194
IL+HC+ R LG P + NR + V L D
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 195 ----PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANE 250
P+ YN +INGLCKN ++NAL +F ++++G + +TYN LI+GL + R +
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 251 ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVA 310
A RLL + + +PN I FT +++ + G L + + EM + + F Y +++
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
G + +A + + M+S G PD+ +YNT+I + + RV++ ++L ++ +G
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
D +T+ +IHG C+A +LN A + + M G ++V N +LD L G I++AL
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 431 EGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISD 486
E ++ D TY I++ LCR + A + + G + +I GL
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 487 GLKNEAKKV 495
GL+ EA K+
Sbjct: 478 GLQREADKL 486
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 175/339 (51%), Gaps = 1/339 (0%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
+KLG P +VT +L++ +C+ F +++ M G P+V+ YN++++G +
Sbjct: 141 MKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDL 200
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
L +F M + IR D +YN L+ G +A R+ +D ++ + DP+ +
Sbjct: 201 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD-MVKRKIDPNVIFFTA 259
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+I+ K G + A ++++ + RR VP V TYN+LING C +A+ + G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
P+ +T+ T++ + R+E G+++ EM +G D F Y T++ + G++ A
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
++ +M+ GV PD+ +YN ++ G++++AL +V+ ++K D T+ III GL
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
C+ +L EA + G + +A ++ GL + G
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 167/323 (51%), Gaps = 3/323 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I +CK + L+ A V K G+ D VT+NTLI + +L M +
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
+ P+VI + +L+ V++G +++ +MI + P+V++YN L++ + G +
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A +F D+++S P TYN +I G CK+ V + + +F + +G V + TYN LI
Sbjct: 308 AKYMF-DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+G C+A + N A+++ + + G P+ +T+ +++C G++E+ L ++ +++
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D Y ++ L +T ++ EA + + GV+PD +Y TMI R+G EA +L
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 360 VDQIEKEG--PGNDQYTHTIIIH 380
+++++G P Y T+ H
Sbjct: 487 CRRMKEDGFMPSERIYDETLRDH 509
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 209/430 (48%), Gaps = 9/430 (2%)
Query: 27 NPITSFL--TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVK 84
N + S L ++R+ ++ V + +G S+ I + MC +++ ++
Sbjct: 174 NSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWG 233
Query: 85 LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
G +P++V +NT+I YC+ + V + +K G P + ++ ++++G ++G F
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVA 293
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP-DEANRVFKDVLLSAETDPSTATYNVM 203
+ + ++ E +R VW N ++ +R G D A + +++ + P ATYN++
Sbjct: 294 SDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI--GWIIANDCKPDVATYNIL 351
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
IN LCK G A+ ++G +P L+Y LI CK++ + A +LL + E G
Sbjct: 352 INRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC 411
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
+P+ +T+ +++ G ++ + + ++ +G + D Y +++ L KTGR + A
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
+ +M+ + PD Y T+I + R G DEA ++ ++G D H +I G C
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 384 KAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSF 439
++ L+EA+ ++ MN + + ++DG K + A+K F ME +
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 440 TYTILVHNLC 449
TYT L++ C
Sbjct: 592 TYTSLINGFC 601
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 169/379 (44%), Gaps = 24/379 (6%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I + CK+K+ D A +L+ + G PD+VT+ LI D + ++ + G+
Sbjct: 387 IQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV 446
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
+PD YN LMSG + G F +F +M++ I PD + Y L+ + R G DEA +
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARK 506
Query: 183 VFKDVLLSAE--TDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
VF LS E +N MI G C++G + AL+ + VP+ TY+ +I+
Sbjct: 507 VFS---LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMN--CCFRCGRLEQGLEILTEMRSKGY 298
G K + A ++ + +PN +T+T+++N CC G + E EM+ +
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCC--QGDFKMAEETFKEMQLRDL 621
Query: 299 TFDGFAYCTVVAALVKTGRVVE-ADEIAEQMMSNGVEPDLASYNTMIYLYFRQ------- 350
+ Y T++ +L K +E A E MM+N P+ ++N ++ + ++
Sbjct: 622 VPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLA 681
Query: 351 -------GRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
G+ E +++ +G + + + LC + A D M GF
Sbjct: 682 EPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGF 741
Query: 404 GFNLVASNCVLDGLGKAGH 422
+ V+ +L G G+
Sbjct: 742 SPDPVSFAAILHGFCVVGN 760
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 176/405 (43%), Gaps = 14/405 (3%)
Query: 97 LIDAYCRFVSFDAGCEVLERMKEA-GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
++ AY S E+ + + E PDVI+ NSL+S V+ ++D+M +
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD----PSTATYNVMINGLCKNG 211
D +S IL+ GM +E L+ P+ YN +I G CK G
Sbjct: 200 GDSVDNYSTCILVK-----GMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLG 254
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
+ NA +F+ L+ +GF+P + T+ +ING CK + RLLSE +E G +
Sbjct: 255 DIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLN 314
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
+++ +R G E + + + D Y ++ L K G+ A ++
Sbjct: 315 NIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKK 374
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
G+ P+ SY +I Y + D A +L+ Q+ + G D T+ I+IHGL + +++A
Sbjct: 375 GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDA 434
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHN 447
V + G + N ++ GL K G A F M R D++ Y L+
Sbjct: 435 VNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDG 494
Query: 448 LCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
R+ F A K ++ G +V A+I G G+ +EA
Sbjct: 495 FIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 176/385 (45%), Gaps = 8/385 (2%)
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE-SEIRPDVWSYNILMHCYFRL 174
R + LT + +S+ ++ G + ++D ++E + PDV + N L+ +
Sbjct: 126 RNENVKLTHEALSH--VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKS 183
Query: 175 GMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLT 234
+A +V+ ++ ++ + +T +++ G+C G V + +G +P ++
Sbjct: 184 RRLGDARKVYDEMCDRGDSVDNYSTC-ILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVF 242
Query: 235 YNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
YN +I G CK A + E + G P TF T++N + G +L+E++
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302
Query: 295 SKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
+G + ++ A + G V+ E +++N +PD+A+YN +I ++G+ +
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362
Query: 355 EALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL 414
A+ +D+ K+G + ++ +I CK+K + A + L M G ++V ++
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422
Query: 415 DGLGKAGHIDRAL----KFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQ 470
GL +GH+D A+ K + D+ Y +L+ LC+ RFL A L
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL 482
Query: 471 VLKATRRAVIDGLISDGLKNEAKKV 495
+IDG I G +EA+KV
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKV 507
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 137/333 (41%), Gaps = 31/333 (9%)
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
++H Y G +A ++ V+ ++ P N +++ L K+ + +A ++ + R
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
G + + L+ G+C + R+L+ G PN + + T++ + G +E
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
+ E++ KG+ + T++ K G V +D + ++ G+ + N +I
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFN 406
+R G + E + I D T+ I+I+ LCK + AV LD + G
Sbjct: 320 KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGL--- 376
Query: 407 LVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQ 466
+ ++ +Y L+ C+++ + ASK L+ +
Sbjct: 377 ----------------------------IPNNLSYAPLIQAYCKSKEYDIASKLLLQMAE 408
Query: 467 CGFQVLKATRRAVIDGLISDGLKNEAKKVRLKI 499
G + T +I GL+ G ++A +++K+
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLM------SGAVRKGLF 142
P+VVT+ +LI+ +C F E + M+ L P+V++Y +L+ S + K ++
Sbjct: 588 PNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVY 647
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFR------LGMPDEANR----VFKDVLLSAE 192
L M +K + +E+ ++N L+ + + L PD +N +F + +
Sbjct: 648 YWELMMTNKCVPNEV-----TFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMK 702
Query: 193 TDPST---ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRAN 249
+D + A YN + LC +G V A + ++GF P+ +++ A+++G C +
Sbjct: 703 SDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSK 762
Query: 250 EARRL 254
+ R +
Sbjct: 763 QWRNM 767
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 196/415 (47%), Gaps = 5/415 (1%)
Query: 40 SKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLID 99
+K + ++ G ++ + CI M K ++KA+ + + G++P + +LI+
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 100 AYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRP 159
YCR + G E+L MK+ + +Y +++ G G ++ +MI S RP
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
+V Y L+ + + +A RV K+ + P YN +I GL K + A S
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKE-MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
+ G P TY A I+G +A A + + E RE G PN + T ++N +
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
G++ + M +G D Y ++ L K +V +A+EI +M G+ PD+ S
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
Y +I + + G + +A + D++ +EG + + +++ G C++ + +A + LD M+
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCR 450
G N V ++DG K+G + A + F+ M+++ DSF YT LV CR
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 198/459 (43%), Gaps = 40/459 (8%)
Query: 19 HPAILNHENPITSFL-TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAEC 77
P ++ + I +FL R + V + +G + N I + KAK++D+A
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
L++ V+ G+ P+ T+ I Y F + + ++ M+E G+ P+ + L++
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
+KG + M++ I D +Y +LM+ F+ D+A +F++ + P
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE-MRGKGIAPDV 627
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
+Y V+ING K G + A S+F + G P V+ YN L+ G C++ +A+ LL E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 258 FREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAA------ 311
G PNA+T+ T+++ + G L + + EM+ KG D F Y T+V
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 312 ----------------------------LVKTGRVVEADEIAEQMMSNGVE----PDLAS 339
+ K G+ E+ ++M + P+ +
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
YN MI ++G ++ A EL Q++ T+T +++G K R E D
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS 438
+ G + + + +++ K G +AL + M +++
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 173/369 (46%), Gaps = 12/369 (3%)
Query: 45 FRIMV-KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
+R MV +G K + + + K ++D AE + + G+ PDV ++ LI+ + +
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
+ + + M E GLTP+VI YN L+ G R G + D+M + P+ +
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
Y ++ Y + G EA R+F ++ L P + Y +++G C+ V A+++F
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLV-PDSFVYTTLVDGCCRLNDVERAITIF-GT 757
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE----PNAITFTTVMNCCFR 279
++G +NALIN + K + +L+ + + PN +T+ +++ +
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
G LE E+ +M++ Y +++ K GR E + ++ ++ G+EPD
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI-----IIHGLCKAKRLNEAVQH 394
Y+ +I + ++G +AL LVDQ+ + +D +I ++ G K + A +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 395 LDHMNSLGF 403
+++M L +
Sbjct: 938 MENMVRLQY 946
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 157/339 (46%), Gaps = 20/339 (5%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMVK-GRSLSTKFLNICIASMCKAKQLDKAECV 78
P + ++ I F + F MV+ G + + N+ + C++ +++KA+ +
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
L + G+ P+ VT+ T+ID YC+ + + MK GL PD Y +L+ G R
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 139 KGLFPMTLHMF---DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD- 194
+ +F K S P +N L++ F+ G + V + L+ D
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAP----FNALINWVFKFGKTELKTEVL-NRLMDGSFDR 799
Query: 195 ---PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEA 251
P+ TYN+MI+ LCK G + A +F +Q +P V+TY +L+NG K R E
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 252 RRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG--FAYCTVV 309
+ E AG EP+ I ++ ++N + G + L ++ +M +K DG + T
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919
Query: 310 AALVKTGRVVEADEIAEQMMSNGVE----PDLASYNTMI 344
A L +V E E+AE++M N V PD A+ +I
Sbjct: 920 ALLSGFAKVGEM-EVAEKVMENMVRLQYIPDSATVIELI 957
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 189/429 (44%), Gaps = 28/429 (6%)
Query: 81 DGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKG 140
DGV G+L D I+ S G E++ R+ + L+ +R
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKV---------LLDALLRWN 200
Query: 141 LFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATY 200
+ ++ M+E + DV +Y++L+ + R G ++ KDVL E + TAT
Sbjct: 201 RLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNV----QLGKDVLFKTEKEFRTATL 256
Query: 201 NVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
NV AL + ++ +G VP TY+ LI+GLCK +R +A+ LL E
Sbjct: 257 NV-----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDS 305
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVE 320
G + T++ +++ + + ++ EM S G + Y + + K G + +
Sbjct: 306 LGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIH 380
A + + M+++G+ P +Y ++I Y R+ V + EL+ +++K YT+ ++
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 381 GLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR---- 436
G+C + L+ A + M + G N+V ++ + A++ + M+ +
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 437 DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVR 496
D F Y L+ L +A+R A LV ++ G + T A I G I A K
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 497 LKIRKAQLL 505
++R+ +L
Sbjct: 546 KEMRECGVL 554
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 4/159 (2%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
P+ VT+N +ID C+ + +A E+ +M+ A L P VI+Y SL++G + G +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEA----NRVFKDVLLSAETDPSTATYNVMI 204
FD+ I + I PD Y+++++ + + GM +A +++F + S +T ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLC 243
+G K G + A + N+ R ++P+ T LIN C
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 171/329 (51%), Gaps = 1/329 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I C+ +L A L +KLG P +VTF +L++ +C F +++++ G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P+V+ YN+++ KG L + M + IRPDV +YN L+ F G + R
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+ D ++ P T++ +I+ K G + A + + +R P ++TYN+LINGL
Sbjct: 241 ILSD-MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
C +EA+++L+ G PNA+T+ T++N + R++ G++IL M G D
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
F Y T+ + G+ A+++ +M+S GV PD+ ++N ++ G++ +AL ++
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
++K T+ III GLCKA ++ +A
Sbjct: 420 LQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 221/445 (49%), Gaps = 16/445 (3%)
Query: 13 AAYPFTHPAILNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQL 72
A F H +L N +T+ L+ RI +S+ + GRS + L + S+ +
Sbjct: 12 TAKGFLHRHLLEKGNLVTA-LSLRICNSRAFS------GRSDYRERLRSGLHSI----KF 60
Query: 73 DKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSL 132
+ A + D + LP +V F+ L+ A + ++A + ++ G++ D+ S+ +L
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 133 MSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAE 192
+ R + L KM++ P + ++ L++ + + EA + D ++
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV-DQIVGLG 179
Query: 193 TDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEAR 252
+P+ YN +I+ LC+ G V+ AL + +++++ G P+V+TYN+LI L + +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 253 RLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAAL 312
R+LS+ G P+ ITF+ +++ + G+L + + EM + + Y +++ L
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 313 VKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ 372
G + EA ++ ++S G P+ +YNT+I Y + RVD+ ++++ + ++G D
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 373 YTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEG 432
+T+ + G C+A + + A + L M S G ++ N +LDGL G I +AL E
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419
Query: 433 ME----VRDSFTYTILVHNLCRARR 453
++ V TY I++ LC+A +
Sbjct: 420 LQKSKTVVGIITYNIIIKGLCKADK 444
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 173/348 (49%), Gaps = 2/348 (0%)
Query: 20 PAILNHENPITSFL-TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECV 78
P+I+ + + F R + ++ +I+ G + N I S+C+ Q++ A V
Sbjct: 147 PSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDV 206
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
L K+G+ PDVVT+N+LI ++ +L M G++PDVI++++L+ +
Sbjct: 207 LKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGK 266
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
+G +++MI+ + P++ +YN L++ G+ DEA +V +VL+S P+
Sbjct: 267 EGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVL-NVLVSKGFFPNAV 325
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
TYN +ING CK V + + + + R G + TYN L G C+A + + A ++L
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
G P+ TF +++ G++ + L L +++ Y ++ L K +V
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE 366
+A + + GV PD+ +Y TM+ R+ EA EL +++KE
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 180/374 (48%), Gaps = 5/374 (1%)
Query: 85 LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
LG+ D+ +F TLID +CR L +M + G P ++++ SL++G F
Sbjct: 108 LGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYE 167
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
+ + D+++ P+V YN ++ G + A V K + P TYN +I
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKH-MKKMGIRPDVVTYNSLI 226
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
L +G + + ++ R G P+V+T++ALI+ K + EA++ +E +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
PN +T+ +++N G L++ ++L + SKG+ + Y T++ K RV + +I
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
M +GV+ D +YNT+ Y + G+ A +++ ++ G D YT I++ GLC
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFT 440
++ +A+ L+ + ++ N ++ GL KA ++ A F + ++ D T
Sbjct: 407 HGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVIT 466
Query: 441 YTILVHNLCRARRF 454
Y ++ L R R +
Sbjct: 467 YITMMIGLRRKRLW 480
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 177/361 (49%), Gaps = 13/361 (3%)
Query: 137 VRKGL----FPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV-LLSA 191
+R GL F L +F M ES P + ++ L+ +L + +F+ + +L
Sbjct: 51 LRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGI 110
Query: 192 ETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEA 251
D ++ +I+ C+ + ALS + + GF P ++T+ +L+NG C R EA
Sbjct: 111 SHD--LYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 252 RRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAA 311
L+ + G+EPN + + T+++ G++ L++L M+ G D Y +++
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 312 LVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGND 371
L +G + I MM G+ PD+ +++ +I +Y ++G++ EA + +++ + +
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Query: 372 QYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF- 430
T+ +I+GLC L+EA + L+ + S GF N V N +++G KA +D +K
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILC 348
Query: 431 ----EGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISD 486
+G++ D+FTY L C+A +F A K L + CG T ++DGL
Sbjct: 349 VMSRDGVD-GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDH 407
Query: 487 G 487
G
Sbjct: 408 G 408
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 126/282 (44%), Gaps = 31/282 (10%)
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
++AL++F ++ +P ++ ++ L+ + K + L G + +FTT+
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
++C RC RL L L +M G+ + ++V R EA + +Q++ G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
EP++ YNT+I +G+V+ AL+++ ++K G D T+ +I L + + +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 394 HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARR 453
L M +G +++ + ++D GK G + A K + M ++ S I+ +N
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEM-IQRSVNPNIVTYN------ 293
Query: 454 FLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
++I+GL GL +EAKKV
Sbjct: 294 ------------------------SLINGLCIHGLLDEAKKV 311
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 206/433 (47%), Gaps = 44/433 (10%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
I I C+A +++K+ +LI+ + G P+VV + TLID C+ + ++ M +
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
GL + +Y L++G + G+ M++KM E + P++++YN +M
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM------------ 275
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
N LCK+G +A +F ++ RG ++TYN LI
Sbjct: 276 ------------------------NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
GLC+ + NEA +++ + + G PN IT+ T+++ G+L + L + +++S+G +
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
Y +V+ + G A ++ ++M G++P +Y +I + R +++A++L
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
+E+ G D +T++++IHG C ++NEA + M N V N ++ G K
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491
Query: 421 GHIDRALKFFEGMEVRD----SFTYTILVHNLCRARRFLCASKHLVACLQCGF----QVL 472
G RALK + ME ++ +Y ++ LC+ R+ A + + + G +L
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSIL 551
Query: 473 KATRRAVIDGLIS 485
RA D +S
Sbjct: 552 SLISRAKNDSHVS 564
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 197/418 (47%), Gaps = 12/418 (2%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
+ +I++Y + S + M + G P +N L++ V F F++
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAET---DPSTATYNVMINGLCKN 210
+S++ DV+S+ IL+ G E + F D+L+ P+ Y +I+G CK
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAG---EIEKSF-DLLIELTEFGFSPNVVIYTTLIDGCCKK 211
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
G + A +F + + G V TY LINGL K + + + +E G PN T+
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 271 TTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS 330
VMN + GR + ++ EMR +G + + Y T++ L + ++ EA+++ +QM S
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 331 NGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
+G+ P+L +YNT+I + G++ +AL L ++ G T+ I++ G C+ +
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 391 AVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVH 446
A + + M G + V ++D ++ ++++A++ ME V D TY++L+H
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 447 NLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQL 504
C + AS+ + ++ + + +I G +G A K+ ++ + +L
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 152/315 (48%), Gaps = 5/315 (1%)
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
P + +N ++ + + + S F N + V +V ++ LI G C+A ++ L
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFF-NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185
Query: 255 LSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK 314
L E E G PN + +TT+++ C + G +E+ ++ EM G + Y ++ L K
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 315 TGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYT 374
G + E+ E+M +GV P+L +YN ++ + GR +A ++ D++ + G + T
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305
Query: 375 HTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
+ +I GLC+ +LNEA + +D M S G NL+ N ++DG G + +AL ++
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365
Query: 435 VR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKN 490
R TY ILV CR A+K + + G + K T +ID
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425
Query: 491 EAKKVRLKIRKAQLL 505
+A ++RL + + L+
Sbjct: 426 KAIQLRLSMEELGLV 440
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 144/279 (51%), Gaps = 1/279 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + +CK + A V + + GV ++VT+NTLI CR + + +V+++MK
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G+ P++I+YN+L+ G G L + + + P + +YNIL+ + R G
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A ++ K+ + PS TY ++I+ ++ + A+ + +++ G VP+V TY+ LI
Sbjct: 392 AAKMVKE-MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+G C + NEA RL E EPN + + T++ + G + L++L EM K
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLA 338
+ +Y ++ L K + EA+ + E+M+ +G++P +
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 36/259 (13%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
+G S + N I +C+ +L++A V+ G+ P+++T+NTLID +C
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIR----------- 158
+ +K GL+P +++YN L+SG RKG M +M E I+
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 159 ------------------------PDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD 194
PDV +Y++L+H + G +EA+R+FK ++ +
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS-MVEKNCE 475
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
P+ YN MI G CK G + AL + + ++ + P V +Y +I LCK R++ EA RL
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Query: 255 LSEFREAGHEPNAITFTTV 273
+ + ++G +P+ + +
Sbjct: 536 VEKMIDSGIDPSTSILSLI 554
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 188/377 (49%), Gaps = 2/377 (0%)
Query: 57 KFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLER 116
K + I+++ + ++ A+ + G V F+ LI AY R + V
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGL-FPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
MKE GL P++++YN+++ + G+ F FD+M + ++PD ++N L+ R G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 176 MPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTY 235
+ + A +F D + + + +YN +++ +CK G + A + + + +P V++Y
Sbjct: 354 LWEAARNLF-DEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
+ +I+G KA R +EA L E R G + +++ T+++ + GR E+ L+IL EM S
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDE 355
G D Y ++ K G+ E ++ +M V P+L +Y+T+I Y + G E
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 356 ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD 415
A+E+ + + G D ++ +I LCK + AV +D M G N+V N ++D
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 416 GLGKAGHIDRALKFFEG 432
G++ +DR+ + G
Sbjct: 593 AFGRSATMDRSADYSNG 609
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 172/346 (49%), Gaps = 10/346 (2%)
Query: 86 GVLPDVVTFNTLIDAYCR-FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
G+ P++VT+N +IDA + + F + + M+ G+ PD I++NSL++ R GL+
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
++FD+M I DV+SYN L+ + G D A + + + P+ +Y+ +I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK-RIMPNVVSYSTVI 416
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
+G K G AL++F ++ G + ++YN L++ K R+ EA +L E G +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
+ +T+ ++ + G+ ++ ++ TEM+ + + Y T++ K G EA EI
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
+ S G+ D+ Y+ +I + G V A+ L+D++ KEG + T+ II +
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
+ ++ + D+ N F+ A + + + G +R ++ F
Sbjct: 597 SATMDRSA---DYSNGGSLPFSSSALSALTETEG-----NRVIQLF 634
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 190/426 (44%), Gaps = 33/426 (7%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
DV ++NTL+DA C+ D E+L +M + P+V+SY++++ G + G F L++F
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
+M I D SYN L+ Y ++G +EA + ++ + S TYN ++ G K
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILRE-MASVGIKKDVVTYNALLGGYGK 491
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
G +F ++R +P +LTY+ LI+G K EA + EF+ AG + +
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL 551
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
++ +++ + G + + ++ EM +G + + Y +++ A GR D A+
Sbjct: 552 YSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF---GRSATMDRSAD--Y 606
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
SNG +S + + L +G + ++L Q+ E N++ T K
Sbjct: 607 SNGGSLPFSS-SALSALTETEG--NRVIQLFGQLTTE--SNNRTT-----------KDCE 650
Query: 390 EAVQHLD-------HMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYT 442
E +Q L M+ L N+V + +L+ + + A E + + D+ Y
Sbjct: 651 EGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYG 710
Query: 443 ILVHNLCRARR---FLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKI 499
+ VH L +R +L A + A A+ D L G K A+ V L+
Sbjct: 711 V-VHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEG 769
Query: 500 RKAQLL 505
R Q+
Sbjct: 770 RSRQVW 775
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 135/351 (38%), Gaps = 97/351 (27%)
Query: 20 PAILNHENPITSFLTQ-RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECV 78
P ++++ I F R + N+ + G +L N ++ K + ++A +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
L + +G+ DVVT+N L+ Y + +D +V MK + P++++Y++L+ G +
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
GL+ + +F + + +R DV
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADV------------------------------------V 550
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKA----RRAN----- 249
Y+ +I+ LCKNG V +A+S+ + + G P V+TYN++I+ ++ R A+
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGG 610
Query: 250 ---------------EARRLLSEFREAGHE------------------------------ 264
E R++ F + E
Sbjct: 611 SLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLE 670
Query: 265 --PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
PN +TF+ ++N C RC E +L E+R FD Y V L+
Sbjct: 671 IKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNKVYGVVHGLLM 717
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 215/456 (47%), Gaps = 11/456 (2%)
Query: 45 FRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRF 104
F ++ KG S I + CK ++++A + + GV P+VVTFNT+ID
Sbjct: 249 FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC 308
Query: 105 VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY 164
+D E+M E G+ P +I+Y+ L+ G R + +M + P+V Y
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ 224
N L+ + G ++A + KD+++S +++TYN +I G CKNG NA + + +
Sbjct: 369 NNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 225 RRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLE 284
GF ++ ++I LC + A R + E P TT+++ + G+
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487
Query: 285 QGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
+ LE+ + +KG+ D ++ L + G++ EA I ++++ G D SYNT+I
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 345 YLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFG 404
+ ++DEA +D++ K G D YT++I+I GL ++ EA+Q D G
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 607
Query: 405 FNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVAC 464
++ + ++DG KA + +FF+ M ++ T++ ++L RA C S L
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA---YCRSGRLSMA 664
Query: 465 LQC-------GFQVLKATRRAVIDGLISDGLKNEAK 493
L+ G AT ++I G+ EAK
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 203/411 (49%), Gaps = 12/411 (2%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG S NI + S+ +A + K C D V GV PDV F T I+A+C+ +
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKC-CEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEE 278
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
++ +M+EAG+ P+V+++N+++ G G + +KM+E + P + +Y+IL+
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
R +A V K+ + P+ YN +I+ + G ++ A+ + + +G
Sbjct: 339 GLTRAKRIGDAYFVLKE-MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL--EQGL 287
TYN LI G CK +A+ A RLL E G N +FT+V+ C C L + L
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI--CLLCSHLMFDSAL 455
Query: 288 EILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLY 347
+ EM + + G T+++ L K G+ +A E+ Q ++ G D + N +++
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 348 FRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNL 407
G++DEA + +I G D+ ++ +I G C K+L+EA LD M G +
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 408 VASNCVLDGLGKAGHIDRALKFFE-----GMEVRDSFTYTILVHNLCRARR 453
+ ++ GL ++ A++F++ GM + D +TY++++ C+A R
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGM-LPDVYTYSVMIDGCCKAER 625
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 182/385 (47%), Gaps = 20/385 (5%)
Query: 9 LHFNAAYPFTHPAILNHENPITSFLTQRIT-------HSK--NVTFRIMVKGRSLSTKFL 59
L F++A F +L + +P LT I+ HSK + F+ + KG + T+
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + +C+A +LD+A + + + G + D V++NTLI C D L+ M +
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GL PD +Y+ L+ G + +D + + PDV++Y++++ + +E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
F D ++S P+T YN +I C++G + AL + +++ +G P TY +LI
Sbjct: 629 GQEFF-DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
G+ R EA+ L E R G EPN +T +++ + G++ + +L EM SK
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ Y ++ + G V EA + +M G+ PD +Y IY Y +QG V EA +
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK- 806
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCK 384
G+D+ + II G K
Sbjct: 807 ---------GSDEENYAAIIEGWNK 822
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 212/501 (42%), Gaps = 54/501 (10%)
Query: 33 LTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVV 92
+ +R +T+ I+VKG + +AK++ A VL + K G P+V+
Sbjct: 321 MVERGMEPTLITYSILVKG--------------LTRAKRIGDAYFVLKEMTKKGFPPNVI 366
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
+N LID++ S + E+ + M GL+ +YN+L+ G + G + +M
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
+ + S+ ++ M D A R ++LL P +I+GLCK+G
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGK 485
Query: 213 VHNALSMFRNLQRRGFV--------------------------PEVL---------TYNA 237
AL ++ +GFV E+L +YN
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LI+G C ++ +EA L E + G +P+ T++ ++ F ++E+ ++ + + G
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
D + Y ++ K R E E ++MMS V+P+ YN +I Y R GR+ AL
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
EL + ++ +G + T+T +I G+ R+ EA + M G N+ ++DG
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 418 GKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLK 473
GK G + + M + + TYT+++ R AS+ L + G
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 474 ATRRAVIDGLISDGLKNEAKK 494
T + I G + G EA K
Sbjct: 786 ITYKEFIYGYLKQGGVLEAFK 806
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 164/353 (46%), Gaps = 1/353 (0%)
Query: 47 IMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVS 106
++++ S L I+ +CK + KA + + G + D T N L+ C
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 107 FDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNI 166
D + + + G D +SYN+L+SG K D+M++ ++PD ++Y+I
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
L+ F + +EA + + D + P TY+VMI+G CK F + +
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGML-PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
P + YN LI C++ R + A L + + G PN+ T+T+++ R+E+
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
+ EMR +G + F Y ++ K G++V+ + + +M S V P+ +Y MI
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
Y R G V EA L++++ ++G D T+ I+G K + EA + D N
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEEN 812
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 189/431 (43%), Gaps = 46/431 (10%)
Query: 95 NTLIDAYCRFVSFDAGC----EVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFD 150
+ LI+ YC D GC +V + G+ P + N L++ VR F FD
Sbjct: 192 DLLIEVYCTQFKRD-GCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD 250
Query: 151 KMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKN 210
+ + + PDV+ + ++ + + G +EA ++F + A P+ T+N +I+GL
Sbjct: 251 VVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSK-MEEAGVAPNVVTFNTVIDGLGMC 308
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
G A + RG P ++TY+ L+ GL +A+R +A +L E + G PN I +
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 271 TTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS 330
+++ G L + +EI M SKG + Y T++ K G+ A+ + ++M+S
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 331 NGVEPDLASYNTMI-----YLYF------------------------------RQGRVDE 355
G + S+ ++I +L F + G+ +
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 356 ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD 415
ALEL Q +G D T ++HGLC+A +L+EA + + G + V+ N ++
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 416 GLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQV 471
G +D A F + M R D++TY+IL+ L + A + C + G
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608
Query: 472 LKATRRAVIDG 482
T +IDG
Sbjct: 609 DVYTYSVMIDG 619
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 215/456 (47%), Gaps = 11/456 (2%)
Query: 45 FRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRF 104
F ++ KG S I + CK ++++A + + GV P+VVTFNT+ID
Sbjct: 249 FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC 308
Query: 105 VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY 164
+D E+M E G+ P +I+Y+ L+ G R + +M + P+V Y
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ 224
N L+ + G ++A + KD+++S +++TYN +I G CKNG NA + + +
Sbjct: 369 NNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 225 RRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLE 284
GF ++ ++I LC + A R + E P TT+++ + G+
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487
Query: 285 QGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
+ LE+ + +KG+ D ++ L + G++ EA I ++++ G D SYNT+I
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 345 YLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFG 404
+ ++DEA +D++ K G D YT++I+I GL ++ EA+Q D G
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 607
Query: 405 FNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVAC 464
++ + ++DG KA + +FF+ M ++ T++ ++L RA C S L
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA---YCRSGRLSMA 664
Query: 465 LQC-------GFQVLKATRRAVIDGLISDGLKNEAK 493
L+ G AT ++I G+ EAK
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 203/411 (49%), Gaps = 12/411 (2%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG S NI + S+ +A + K C D V GV PDV F T I+A+C+ +
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKC-CEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEE 278
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
++ +M+EAG+ P+V+++N+++ G G + +KM+E + P + +Y+IL+
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
R +A V K+ + P+ YN +I+ + G ++ A+ + + +G
Sbjct: 339 GLTRAKRIGDAYFVLKE-MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL--EQGL 287
TYN LI G CK +A+ A RLL E G N +FT+V+ C C L + L
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI--CLLCSHLMFDSAL 455
Query: 288 EILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLY 347
+ EM + + G T+++ L K G+ +A E+ Q ++ G D + N +++
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 348 FRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNL 407
G++DEA + +I G D+ ++ +I G C K+L+EA LD M G +
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 408 VASNCVLDGLGKAGHIDRALKFFE-----GMEVRDSFTYTILVHNLCRARR 453
+ ++ GL ++ A++F++ GM + D +TY++++ C+A R
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGM-LPDVYTYSVMIDGCCKAER 625
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 182/385 (47%), Gaps = 20/385 (5%)
Query: 9 LHFNAAYPFTHPAILNHENPITSFLTQRIT-------HSK--NVTFRIMVKGRSLSTKFL 59
L F++A F +L + +P LT I+ HSK + F+ + KG + T+
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + +C+A +LD+A + + + G + D V++NTLI C D L+ M +
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GL PD +Y+ L+ G + +D + + PDV++Y++++ + +E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
F D ++S P+T YN +I C++G + AL + +++ +G P TY +LI
Sbjct: 629 GQEFF-DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
G+ R EA+ L E R G EPN +T +++ + G++ + +L EM SK
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ Y ++ + G V EA + +M G+ PD +Y IY Y +QG V EA +
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK- 806
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCK 384
G+D+ + II G K
Sbjct: 807 ---------GSDEENYAAIIEGWNK 822
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 212/501 (42%), Gaps = 54/501 (10%)
Query: 33 LTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVV 92
+ +R +T+ I+VKG + +AK++ A VL + K G P+V+
Sbjct: 321 MVERGMEPTLITYSILVKG--------------LTRAKRIGDAYFVLKEMTKKGFPPNVI 366
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
+N LID++ S + E+ + M GL+ +YN+L+ G + G + +M
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
+ + S+ ++ M D A R ++LL P +I+GLCK+G
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGK 485
Query: 213 VHNALSMFRNLQRRGFV--------------------------PEVL---------TYNA 237
AL ++ +GFV E+L +YN
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LI+G C ++ +EA L E + G +P+ T++ ++ F ++E+ ++ + + G
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
D + Y ++ K R E E ++MMS V+P+ YN +I Y R GR+ AL
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
EL + ++ +G + T+T +I G+ R+ EA + M G N+ ++DG
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 418 GKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLK 473
GK G + + M + + TYT+++ R AS+ L + G
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 474 ATRRAVIDGLISDGLKNEAKK 494
T + I G + G EA K
Sbjct: 786 ITYKEFIYGYLKQGGVLEAFK 806
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 164/353 (46%), Gaps = 1/353 (0%)
Query: 47 IMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVS 106
++++ S L I+ +CK + KA + + G + D T N L+ C
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 107 FDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNI 166
D + + + G D +SYN+L+SG K D+M++ ++PD ++Y+I
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
L+ F + +EA + + D + P TY+VMI+G CK F + +
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGML-PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
P + YN LI C++ R + A L + + G PN+ T+T+++ R+E+
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
+ EMR +G + F Y ++ K G++V+ + + +M S V P+ +Y MI
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
Y R G V EA L++++ ++G D T+ I+G K + EA + D N
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEEN 812
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 189/431 (43%), Gaps = 46/431 (10%)
Query: 95 NTLIDAYCRFVSFDAGC----EVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFD 150
+ LI+ YC D GC +V + G+ P + N L++ VR F FD
Sbjct: 192 DLLIEVYCTQFKRD-GCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD 250
Query: 151 KMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKN 210
+ + + PDV+ + ++ + + G +EA ++F + A P+ T+N +I+GL
Sbjct: 251 VVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSK-MEEAGVAPNVVTFNTVIDGLGMC 308
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
G A + RG P ++TY+ L+ GL +A+R +A +L E + G PN I +
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 271 TTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS 330
+++ G L + +EI M SKG + Y T++ K G+ A+ + ++M+S
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 331 NGVEPDLASYNTMI-----YLYF------------------------------RQGRVDE 355
G + S+ ++I +L F + G+ +
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 356 ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD 415
ALEL Q +G D T ++HGLC+A +L+EA + + G + V+ N ++
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 416 GLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQV 471
G +D A F + M R D++TY+IL+ L + A + C + G
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608
Query: 472 LKATRRAVIDG 482
T +IDG
Sbjct: 609 DVYTYSVMIDG 619
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 207/425 (48%), Gaps = 9/425 (2%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ S +A QL A VL + GV P+++ NT ID + R + LERM+ G+
Sbjct: 249 MVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGI 308
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P+V++YN ++ G + + + M PD SY +M + E
Sbjct: 309 VPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRD 368
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+ K + P TYN +I+ L K+ + AL ++ Q +GF + L Y+A+++ L
Sbjct: 369 LMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHAL 428
Query: 243 CKARRANEARRLLSEFREAGH-EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
CK R +EA+ L++E GH P+ +T+T V+N R G +++ ++L M + G+ +
Sbjct: 429 CKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 488
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
+Y ++ + +TG+ +EA E+ + P+ +Y+ +++ R+G++ EA ++V
Sbjct: 489 TVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVR 548
Query: 362 QIEKEG--PGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
++ +G PG + +++ LC+ R +EA + ++ + G N+V V+ G +
Sbjct: 549 EMVLKGFFPGPVEI--NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 420 AGHIDRALKFFEGMEV----RDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKAT 475
+D AL + M + D FTYT LV L + R A++ + L G T
Sbjct: 607 NDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVT 666
Query: 476 RRAVI 480
R VI
Sbjct: 667 YRTVI 671
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 187/397 (47%), Gaps = 7/397 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I +A +L+KA L +G++P+VVT+N +I YC + E+LE M
Sbjct: 281 NTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHS 340
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI-ESEIRPDVWSYNILMHCYFRLGMPD 178
G PD +SY ++M ++ + KM E + PD +YN L+H + D
Sbjct: 341 KGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHAD 400
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVP-EVLTYNA 237
EA KD Y+ +++ LCK G + A + + +G P +V+TY A
Sbjct: 401 EALWFLKDAQEKG-FRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTA 459
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
++NG C+ ++A++LL GH+PN +++T ++N R G+ + E++
Sbjct: 460 VVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHW 519
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
++ + Y ++ L + G++ EA ++ +M+ G P N ++ R GR EA
Sbjct: 520 WSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEAR 579
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
+ +++ +G + T +IHG C+ L+ A+ LD M + ++ ++D L
Sbjct: 580 KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL 639
Query: 418 GKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCR 450
GK G I A + + M + TY ++H C+
Sbjct: 640 GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQ 676
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 186/400 (46%), Gaps = 7/400 (1%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D + + ++++ + VL MK G+ +++ +M R G L +
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
M + + P++ N + + R ++A R F + + P+ TYN MI G C
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALR-FLERMQVVGIVPNVVTYNCMIRGYCD 324
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF-REAGHEPNAI 268
V A+ + ++ +G +P+ ++Y ++ LCK +R E R L+ + +E G P+ +
Sbjct: 325 LHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQV 384
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
T+ T+++ + ++ L L + + KG+ D Y +V AL K GR+ EA ++ +M
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444
Query: 329 MSNG-VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
+S G PD+ +Y ++ + R G VD+A +L+ + G + ++T +++G+C+ +
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFT----YTI 443
EA + ++ + N + + ++ GL + G + A M ++ F +
Sbjct: 505 SLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINL 564
Query: 444 LVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGL 483
L+ +LCR R A K + CL G + VI G
Sbjct: 565 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 604
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 162/335 (48%), Gaps = 8/335 (2%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I + K D+A L D + G D + ++ ++ A C+ +++ M
Sbjct: 387 NTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLS 446
Query: 120 AG-LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
G PDV++Y ++++G R G + M +P+ SY L++ R G
Sbjct: 447 KGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSL 506
Query: 179 EANRVFKDVLLSAE--TDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYN 236
EA + +S E P++ TY+V+++GL + G + A + R + +GF P + N
Sbjct: 507 EAREMMN---MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEIN 563
Query: 237 ALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
L+ LC+ R +EAR+ + E G N + FTTV++ + L+ L +L +M
Sbjct: 564 LLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLI 623
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA 356
D F Y T+V L K GR+ EA E+ ++M+ G++P +Y T+I+ Y + G+VD+
Sbjct: 624 NKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDL 683
Query: 357 LELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
+ +++++ Y +I LC +L EA
Sbjct: 684 VAILEKMISRQKCRTIYNQ--VIEKLCVLGKLEEA 716
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 150/290 (51%), Gaps = 6/290 (2%)
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
+ G + +AL + +QR G P +L N I+ +A R +A R L + G PN +
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
T+ ++ R+E+ +E+L +M SKG D +Y T++ L K R+VE ++ ++M
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 329 M-SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
+G+ PD +YNT+I++ + DEAL + +++G D+ ++ I+H LCK R
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433
Query: 388 LNEAVQHLDHMNSLGF-GFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYT 442
++EA ++ M S G ++V V++G + G +D+A K + M ++ +YT
Sbjct: 434 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYT 493
Query: 443 ILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
L++ +CR + L A + + + + T ++ GL +G +EA
Sbjct: 494 ALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEA 543
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 136/308 (44%), Gaps = 8/308 (2%)
Query: 194 DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARR 253
DP Y M+ L K + + ++RRG ++ ++ +A + +A +
Sbjct: 206 DP--MVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263
Query: 254 LLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
+L+ + AG EPN + T ++ R RLE+ L L M+ G + Y ++
Sbjct: 264 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 314 KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE-GPGNDQ 372
RV EA E+ E M S G PD SY T++ ++ R+ E +L+ ++ KE G DQ
Sbjct: 324 DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQ 383
Query: 373 YTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEG 432
T+ +IH L K +EA+ L GF + + + ++ L K G + A
Sbjct: 384 VTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINE 443
Query: 433 MEVR-----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
M + D TYT +V+ CR A K L G + + A+++G+ G
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 488 LKNEAKKV 495
EA+++
Sbjct: 504 KSLEAREM 511
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 156/378 (41%), Gaps = 78/378 (20%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLG-VLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAG 121
+ ++CK ++ +A+ ++ + + G PDVVT+ +++ +CR D ++L+ M G
Sbjct: 425 VHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484
Query: 122 LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
P+ +SY +L++G R G M + E P+ +Y+++MH R G EA
Sbjct: 485 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 544
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV------------ 229
V ++++L P N+++ LC++G H A +G
Sbjct: 545 DVVREMVLKGFF-PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHG 603
Query: 230 -----------------------PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
+V TY L++ L K R EA L+ + G +P
Sbjct: 604 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPT 663
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEM--RSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
+T+ TV++ + G+++ + IL +M R K T Y V+ L G++ EAD +
Sbjct: 664 PVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI----YNQVIEKLCVLGKLEEADTL 719
Query: 325 AEQMMSNGVEPD-----------------LASYNTMIYLYFR------------------ 349
+++ D L++Y ++ R
Sbjct: 720 LGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVL 779
Query: 350 QGRVDEALELVDQIEKEG 367
+G+VDEA +L+ ++ + G
Sbjct: 780 KGKVDEADKLMLRLVERG 797
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 3/209 (1%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
+++ + +V +++KG +N+ + S+C+ + +A + + + G +VV F
Sbjct: 539 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT 598
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
T+I +C+ DA VL+ M DV +Y +L+ +KG + KM+
Sbjct: 599 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK 658
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN 215
I P +Y ++H Y ++G D+ + + ++ YN +I LC G +
Sbjct: 659 GIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI---SRQKCRTIYNQVIEKLCVLGKLEE 715
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCK 244
A ++ + R + T AL+ G K
Sbjct: 716 ADTLLGKVLRTASRSDAKTCYALMEGYLK 744
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 202/443 (45%), Gaps = 13/443 (2%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI I K ++++A D + G +FN LI+ YC+ FD V + M
Sbjct: 277 NILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLN 336
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
AG+ P +YN + G + M PDV SYN LMH Y ++G E
Sbjct: 337 AGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVE 392
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A+ +F D L + + PS TYN +I+GLC++G + A + + + P+V+TY L+
Sbjct: 393 ASLLFDD-LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 451
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM-RSKGY 298
G K + A + E G +P+ +TT R G ++ + EM + +
Sbjct: 452 KGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHH 511
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
D Y + L K G +V+A E ++ G+ PD +Y T+I Y G+ A
Sbjct: 512 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN 571
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
L D++ ++ T+ ++I+G KA RL +A Q+ M G N++ N +L G+
Sbjct: 572 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC 631
Query: 419 KAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKA 474
KAG+ID A ++ ME + ++YT+L+ C ++ K L +
Sbjct: 632 KAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGY 691
Query: 475 TRRAVIDGLISDGLKNEAKKVRL 497
T RA+ L D +E+++V
Sbjct: 692 THRALFKHLEKD---HESREVEF 711
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 137/308 (44%), Gaps = 39/308 (12%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I +C++ L+ A+ + + + PDV+T+ TL+ + + + EV + M
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIR-PDVWSYNI------------ 166
G+ PD +Y + G +R G + ++M+ ++ PD+ YN+
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 167 ----LMHCYFRLGM-PDEA-----------NRVFK------DVLLSAETDPSTATYNVMI 204
FR+G+ PD N FK D +L PS TY V+I
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
G K G + A +++RG P V+T+NAL+ G+CKA +EA R L + E G
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP 652
Query: 265 PNAITFTTVM--NCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
PN ++T ++ NC F + E+ +++ EM K DG+ + + L K E +
Sbjct: 653 PNKYSYTMLISKNCDFE--KWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVE 710
Query: 323 EIAEQMMS 330
+ ++S
Sbjct: 711 FLERLLLS 718
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 140/310 (45%), Gaps = 9/310 (2%)
Query: 137 VRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPS 196
+K + L F+KMI P V + NI++ M ++A+ V+ + ++ P+
Sbjct: 179 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVY-ETMIEHGIMPT 237
Query: 197 TATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
T+N M++ K G + ++ ++RR +TYN LING K + EARR
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
+ R +G +F ++ + G + + EM + G Y + AL G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHT 376
R+ +A E+ M + PD+ SYNT+++ Y + G+ EA L D + T+
Sbjct: 358 RIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413
Query: 377 IIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR 436
+I GLC++ L A + + M + +++ ++ G K G++ A + ++ M +
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Query: 437 ----DSFTYT 442
D + YT
Sbjct: 474 GIKPDGYAYT 483
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 8/247 (3%)
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
K L F + R+GF+P V N ++ L +R N+A + E G P I
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
TF T+++ CF+ G LE+ +I EM+ + F Y ++ K G++ EA M
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
+G S+N +I Y +QG D+A + D++ G T+ I I LC R+
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD----SFTYTIL 444
++A + L M + ++V+ N ++ G K G A F+ + D TY L
Sbjct: 360 DDARELLSSMAAP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Query: 445 VHNLCRA 451
+ LC +
Sbjct: 416 IDGLCES 422
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 194/410 (47%), Gaps = 41/410 (10%)
Query: 47 IMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVS 106
I+ G L+ NI + CK + A+ V + K + P VV+FNTLI+ YC+ +
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 107 FDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNI 166
D G + +M+++ PDV +Y++L++ ++ +FD+M + + P+ +
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
L+H + R G D ++ +LS P YN ++NG CKNG + A ++ + RR
Sbjct: 351 LIHGHSRNGEIDLMKESYQK-MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
G P+ +TY LI+G C R G +E
Sbjct: 410 GLRPDKITYTTLIDGFC-----------------------------------RGGDVETA 434
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
LEI EM G D + +V + K GRV++A+ +M+ G++PD +Y M+
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFN 406
+ ++G +L+ +++ +G T+ ++++GLCK ++ A LD M ++G +
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554
Query: 407 LVASNCVLDGLGKAGHIDRALKFFEGME---VRDSFTYTILVHNLCRARR 453
+ N +L+G + H + + ++ + E V D +Y +V+ L RA +
Sbjct: 555 DITYNTLLEGHHR--HANSSKRYIQKPEIGIVADLASYKSIVNELDRASK 602
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 161/327 (49%), Gaps = 5/327 (1%)
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
+V+ +NILM+ + + G +A +VF D + P+ ++N +ING CK G + +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVF-DEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
+++ P+V TY+ALIN LCK + + A L E + G PN + FTT+++ R
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
G ++ E +M SKG D Y T+V K G +V A I + M+ G+ PD +
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
Y T+I + R G V+ ALE+ ++++ G D+ + ++ G+CK R+ +A + L M
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFL 455
G + V ++D K G K + M+ V TY +L++ LC+ +
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
Query: 456 CASKHLVACLQCGFQVLKATRRAVIDG 482
A L A L G T +++G
Sbjct: 538 NADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 116/230 (50%), Gaps = 4/230 (1%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
+++ KG N + CK L A ++ ++ G+ PD +T+ TLID +CR
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
+ E+ + M + G+ D + +++L+ G ++G +M+ + I+PD +Y
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
++M + + G ++ K++ PS TYNV++NGLCK G + NA + +
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
G VP+ +TYN L+ G R AN ++R + + E G + ++ +++N
Sbjct: 549 IGVVPDDITYNTLLEG--HHRHANSSKRYIQK-PEIGIVADLASYKSIVN 595
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
Query: 292 EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG 351
E+ G+ + + + ++ K G + +A ++ +++ ++P + S+NT+I Y + G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 352 RVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASN 411
+DE L Q+EK D +T++ +I+ LCK +++ A D M G N V
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 412 CVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQC 467
++ G + G ID + ++ M + D Y LV+ C+ + A + ++
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 468 GFQVLKATRRAVIDGLISDGLKNEAKKVR 496
G + K T +IDG G A ++R
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIR 438
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 173/351 (49%), Gaps = 2/351 (0%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM- 144
GV D F LI AY + + E RMKE PDV +YN ++ +R+ +F M
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
++++M++ P+++++ ILM ++ G +A ++F D + P+ TY ++I
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDD-MTGRGISPNRVTYTILI 240
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
+GLC+ G +A +F +Q G P+ + +NAL++G CK R EA LL F + G
Sbjct: 241 SGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV 300
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
++++++ FR R Q E+ M K D Y ++ L K G++ +A ++
Sbjct: 301 LGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKL 360
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
M S G+ PD YN +I +G ++E L ++ + D THTI+I +C+
Sbjct: 361 LSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCR 420
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEV 435
+ EA + + G ++ N ++DGL K+G + A MEV
Sbjct: 421 NGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 182/417 (43%), Gaps = 61/417 (14%)
Query: 89 PDVVTFNTLIDAYCRF-VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLH 147
PDV T+N ++ R V F V M + +P++ ++ LM G +KG
Sbjct: 160 PDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQK 219
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
MFD M I P+ +Y IL+ + G D+A ++F ++ S P + +N +++G
Sbjct: 220 MFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNY-PDSVAHNALLDGF 278
Query: 208 CKNGYVHNALSMFRNLQRRGFV-----------------------------------PEV 232
CK G + A + R ++ GFV P++
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 233 LTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR--LEQGLEIL 290
+ Y LI GL KA + +A +LLS G P+ + V+ CGR LE+G +
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKAL--CGRGLLEEGRSLQ 396
Query: 291 TEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQ 350
EM D + ++ ++ + G V EA+EI ++ +G P +A++N +I +
Sbjct: 397 LEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKS 456
Query: 351 GRVDEALELVDQIEKEGP----------GNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNS 400
G + EA L+ ++E P GN + + + KA R L H
Sbjct: 457 GELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYR------DLAHFAD 510
Query: 401 LGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARR 453
G ++V+ N +++G +AG ID ALK ++++ DS TY L++ L R R
Sbjct: 511 TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGR 567
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 192/421 (45%), Gaps = 50/421 (11%)
Query: 94 FNTLIDAYCRFVSFDAGCEV----LERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
F +ID +S D GC++ LE +K G++ D + L+S + G+ + F
Sbjct: 95 FGLVID----MLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESF 150
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
+M E + RPDV++YN+++ R+ M +E + + A YN M+ C
Sbjct: 151 GRMKEFDCRPDVFTYNVIL----RVMMREEVFFML-----------AFAVYNEMLKCNCS 195
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
P + T+ L++GL K R ++A+++ + G PN +T
Sbjct: 196 --------------------PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVT 235
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
+T +++ + G + ++ EM++ G D A+ ++ K GR+VEA E+
Sbjct: 236 YTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFE 295
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
+G L Y+++I FR R +A EL + K+ D +TI+I GL KA ++
Sbjct: 296 KDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRA----LKFFEGMEVRDSFTYTILV 445
+A++ L M S G + N V+ L G ++ L+ E D+ T+TIL+
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 446 HNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQLL 505
++CR A + + G AT A+IDGL G E K+ RL + K ++
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSG---ELKEARLLLHKMEVG 472
Query: 506 R 506
R
Sbjct: 473 R 473
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 192/455 (42%), Gaps = 61/455 (13%)
Query: 51 GRSLSTKFLN--ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFD 108
GR +S + I I+ +C+ D A + + G PD V N L+D +C+
Sbjct: 226 GRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMV 285
Query: 109 AGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILM 168
E+L ++ G + Y+SL+ G R + ++ M++ I+PD+ Y IL+
Sbjct: 286 EAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILI 345
Query: 169 HCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF 228
+ G ++A ++ + S P T YN +I LC G + S+ +
Sbjct: 346 QGLSKAGKIEDALKLLSS-MPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETES 404
Query: 229 VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLE 288
P+ T+ LI +C+ EA + +E ++G P+ TF +++ + G L++
Sbjct: 405 FPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARL 464
Query: 289 ILTEMR-------------SKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
+L +M S +FD +V++G +++A G P
Sbjct: 465 LLHKMEVGRPASLFLRLSHSGNRSFD---------TMVESGSILKAYRDLAHFADTGSSP 515
Query: 336 DLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHL 395
D+ SYN +I + R G +D AL+L++ ++ +G D T+ +I+GL + R EA +
Sbjct: 516 DIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Query: 396 ----DHMNSLG----------------FGFNLVAS-----NCVLDGLG-------KAGHI 423
D +S FNL +C+ D K G
Sbjct: 576 YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGET 635
Query: 424 DRALKFFEGMEVR-DSFT---YTILVHNLCRARRF 454
+RAL+ ++ R D T YTI + LC++ RF
Sbjct: 636 ERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRF 670
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 179/413 (43%), Gaps = 23/413 (5%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
I + + K + A+ + D G+ P+ VT+ LI C+ S D ++ M+
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ 260
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
+G PD +++N+L+ G + G + + + Y+ L+ FR
Sbjct: 261 TSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYT 320
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+A ++ + +L P Y ++I GL K G + +AL + ++ +G P+ YNA+
Sbjct: 321 QAFELYAN-MLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I LC E R L E E P+A T T ++ R G + + EI TE+ G
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGC 439
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDL---------ASYNTMIYLYFR 349
+ + ++ L K+G + EA + + M G L S++TM+
Sbjct: 440 SPSVATFNALIDGLCKSGELKEARLLLHK-MEVGRPASLFLRLSHSGNRSFDTMV----E 494
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
G + +A + G D ++ ++I+G C+A ++ A++ L+ + G + V
Sbjct: 495 SGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVT 554
Query: 410 SNCVLDGLGKAGHIDRALKFFEGMEVRDSF-----TYTILVHNLCRARRFLCA 457
N +++GL + G + A K F +D F Y L+ CR R+ L A
Sbjct: 555 YNTLINGLHRVGREEEAFKLFYA---KDDFRHSPAVYRSLMTWSCRKRKVLVA 604
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 150/350 (42%), Gaps = 12/350 (3%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG S T N I ++C L++ + ++ + PD T LI + CR
Sbjct: 367 KGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRE 426
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
E+ ++++G +P V ++N+L+ G + G + KM E+ + L H
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM---EVGRPASLFLRLSH 483
Query: 170 CYFRL--GMPDEAN--RVFKDVLLSAET--DPSTATYNVMINGLCKNGYVHNALSMFRNL 223
R M + + + ++D+ A+T P +YNV+ING C+ G + AL + L
Sbjct: 484 SGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVL 543
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
Q +G P+ +TYN LINGL + R EA +L + H P + ++M R ++
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRSLMTWSCRKRKV 601
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
+ + K D + K G A ++ + E L Y
Sbjct: 602 LVAFNLWMKYLKKISCLDD-ETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIW 660
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
+ + GR EAL + + ++ + +IHGLCK ++L+ A++
Sbjct: 661 LIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIE 710
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 211/491 (42%), Gaps = 108/491 (21%)
Query: 71 QLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYN 130
Q++ A +L + G P+VVTF TLI+ +C+ D ++ + M++ G+ PD+I+Y+
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 131 SLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL-- 188
+L+ G + G+ M +F + + ++ DV ++ + Y + G A+ V+K +L
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 189 --------------------------------LSAETDPSTATYNVMINGLCKNGYVHNA 216
L +PS TY+ +I+G CK G + +
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 217 LSMFRNLQRRGFVPEVLTY-----------------------------------NALING 241
+++ ++ + G+ P+V+ Y N+LI+G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
C+ R +EA ++ G +P+ TFTTVM GRLE+ L + M G D
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 302 GFAYCTVVAA-----------------------------------LVKTGRVVEADEIAE 326
AYCT++ A L K R+ +A +
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
++ +EPD+ +YNTMI Y R+DEA + + ++ G + T TI+IH LCK
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 685
Query: 387 RLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYT 442
++ A++ M G N V C++D K+ I+ + K FE M+ + +Y+
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745
Query: 443 ILVHNLCRARR 453
I++ LC+ R
Sbjct: 746 IIIDGLCKRGR 756
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 151/309 (48%), Gaps = 1/309 (0%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
+VV FN+LID +CR FD +V M G+ PDV ++ ++M ++ +G L +F
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
+M + + PD +Y L+ + + P ++F D++ + A NV+I+ L K
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF-DLMQRNKISADIAVCNVVIHLLFK 613
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
+ +A F NL P+++TYN +I G C RR +EA R+ + PN +T
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
T +++ + ++ + + + M KG + Y ++ K+ + + ++ E+M
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
G+ P + SY+ +I ++GRVDEA + Q D + I+I G CK RL
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 390 EAVQHLDHM 398
EA +HM
Sbjct: 794 EAALLYEHM 802
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 160/334 (47%), Gaps = 1/334 (0%)
Query: 39 HSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLI 98
H+ + +++ + L+ N I C+ + D+A V G+ PDV TF T++
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 99 DAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIR 158
+ + RM + GL PD ++Y +L+ + + L +FD M ++I
Sbjct: 539 RVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKIS 598
Query: 159 PDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALS 218
D+ N+++H F+ ++A++ F + L+ + +P TYN MI G C + A
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNN-LIEGKMEPDIVTYNTMICGYCSLRRLDEAER 657
Query: 219 MFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCF 278
+F L+ F P +T LI+ LCK + A R+ S E G +PNA+T+ +M+
Sbjct: 658 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 717
Query: 279 RCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLA 338
+ +E ++ EM+ KG + +Y ++ L K GRV EA I Q + + PD+
Sbjct: 718 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 777
Query: 339 SYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ 372
+Y +I Y + GR+ EA L + + + G D
Sbjct: 778 AYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 144/282 (51%), Gaps = 7/282 (2%)
Query: 71 QLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYN 130
+L++A + K+G+ PD + + TLIDA+C+ + G ++ + M+ ++ D+ N
Sbjct: 546 RLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 605
Query: 131 SLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLS 190
++ + F+ +IE ++ PD+ +YN ++ Y L DEA R+F ++L
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKV 664
Query: 191 AETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANE 250
P+T T ++I+ LCKN + A+ MF + +G P +TY L++ K+
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 251 ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVA 310
+ +L E +E G P+ ++++ +++ + GR+++ I + D AY ++
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPD------LASYNTMIYL 346
K GR+VEA + E M+ NGV+PD L+ YN +L
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWL 826
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 189/424 (44%), Gaps = 5/424 (1%)
Query: 15 YPFTHPAILNHENPITSFLTQRITHSKNVTFRIM--VKGRSLSTKFLNICIASMCKAKQL 72
Y H I N + + + ++ F ++ ++ RSL + C+ +
Sbjct: 103 YTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMV 162
Query: 73 DKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSL 132
DKA + + +LGV+ + ++++ D + +++ G+ P +S +
Sbjct: 163 DKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGF 222
Query: 133 MSGAVR-KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSA 191
+ A+ KG L ++E R + S N ++ + + A+R+ ++L
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLS-LVLDC 280
Query: 192 ETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEA 251
P+ T+ +ING CK G + A +F+ +++RG P+++ Y+ LI+G KA
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 252 RRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAA 311
+L S+ G + + + F++ ++ + G L + M +G + + Y ++
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 312 LVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGND 371
L + GR+ EA + Q++ G+EP + +Y+++I + + G + L + + K G D
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 372 QYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE 431
+ +++ GL K + A++ M N+V N ++DG + D ALK F
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 432 GMEV 435
M +
Sbjct: 521 LMGI 524
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 170/428 (39%), Gaps = 89/428 (20%)
Query: 114 LERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI--------------ESEIRP 159
L+ + A ++ S+ ++ +R G+F + +FD+MI + +
Sbjct: 87 LKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDA 146
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFK---------------------------------- 185
DV + LM C R GM D+A +F
Sbjct: 147 DVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHF 204
Query: 186 DVLLSAETDPS-TATYNVMINGLCKNGYVHNALSMFRNLQRRGF---------------- 228
D L +PS + + +++ L G V AL R + RGF
Sbjct: 205 DKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSV 264
Query: 229 ------------------VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
P V+T+ LING CK + A L + G EP+ I +
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 271 TTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS 330
+T+++ F+ G L G ++ ++ KG D + + + VK+G + A + ++M+
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 331 NGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
G+ P++ +Y +I + GR+ EA + QI K G T++ +I G CK L
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 391 AVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKF---FEGMEVR-DSFTYTILVH 446
+ M +G+ ++V ++DGL K G + A++F G +R + + L+
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 447 NLCRARRF 454
CR RF
Sbjct: 505 GWCRLNRF 512
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
Query: 19 HPAILNHENPITSFLT-QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAEC 77
P I+ + I + + +R+ ++ + + V +T L I I +CK +D A
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
+ + G P+ VT+ L+D + + V + ++ E M+E G++P ++SY+ ++ G
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL 188
++G ++F + I++++ PDV +Y IL+ Y ++G EA +++ +L
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 803
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 101/239 (42%), Gaps = 8/239 (3%)
Query: 254 LLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
+L R+ + + F +M CC R G +++ LEI G + ++ +L+
Sbjct: 135 VLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI 192
Query: 314 KTGRVVEADEIAEQMMSNGVEPD-LASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ 372
+ RV + +++ G+EP ++++ ++ F +G V +AL+ + + G
Sbjct: 193 GSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI 252
Query: 373 YTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEG 432
+ ++ GL ++ A + L + G N+V +++G K G +DRA F+
Sbjct: 253 VSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 433 MEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
ME R D Y+ L+ +A K L G ++ + ID + G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 195/395 (49%), Gaps = 8/395 (2%)
Query: 66 MCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPD 125
+CKA +L KA V+ V G++PD + L++ C+ + +++E+M++ G +
Sbjct: 116 LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSN 175
Query: 126 VISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFK 185
++YN+L+ G G +L +++++ + P+ ++Y+ L+ ++ DEA ++
Sbjct: 176 TVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLD 235
Query: 186 DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKA 245
++++ +P+ +YNV++ G CK G +A+++FR L +GF V++YN L+ LC
Sbjct: 236 EIIVKG-GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCD 294
Query: 246 RRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF--DGF 303
R EA LL+E P+ +T+ ++N GR EQ L++L EM + F
Sbjct: 295 GRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTAT 354
Query: 304 AYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQI 363
+Y V+A L K G+V + ++M+ +P+ +YN + L +V EA ++ +
Sbjct: 355 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSL 414
Query: 364 EKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHI 423
+ + +I LC+ A Q L M GF + + ++ GL G
Sbjct: 415 SNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 474
Query: 424 DRALKFFEGMEVRDSFTYTI-----LVHNLCRARR 453
A++ ME ++ T+ ++ LC+ RR
Sbjct: 475 TGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRR 509
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 181/394 (45%), Gaps = 19/394 (4%)
Query: 114 LERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFR 173
LE + G P+V L+ + + + + M+ S I PD +Y L++ +
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 174 LGMPDEANRVFKDVLLSAETDPS-TATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEV 232
G A ++ + + PS T TYN ++ GLC G ++ +L L ++G P
Sbjct: 154 RGNVGYAMQLVEK--MEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNA 211
Query: 233 LTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTE 292
TY+ L+ K R +EA +LL E G EPN +++ ++ + GR + + + E
Sbjct: 212 FTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE 271
Query: 293 MRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGR 352
+ +KG+ + +Y ++ L GR EA+ + +M P + +YN +I GR
Sbjct: 272 LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGR 331
Query: 353 VDEALELVDQIEKEGPGNDQY-----THTIIIHGLCKAKRLNEAVQHLDHM-----NSLG 402
++AL+++ ++ K GN Q+ ++ +I LCK +++ V+ LD M
Sbjct: 332 TEQALQVLKEMSK---GNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNE 388
Query: 403 FGFNLVASNCVLDG-LGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHL 461
+N + S C + + +A +I ++L + D Y ++ +LCR A + L
Sbjct: 389 GTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHD--FYKSVITSLCRKGNTFAAFQLL 446
Query: 462 VACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
+CGF T A+I GL +G+ A +V
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEV 480
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 120/240 (50%), Gaps = 4/240 (1%)
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
+ ++ S +L G P V L+ LCKA R +A R++ +G P+A +T
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
++N + G + ++++ +M GY + Y +V L G + ++ + E++M G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
+ P+ +Y+ ++ +++ DEA++L+D+I +G + ++ +++ G CK R ++A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS----FTYTILVHNL 448
+ + GF N+V+ N +L L G + A M+ D TY IL+++L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 155/356 (43%), Gaps = 4/356 (1%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
R+M KG + + + + + K + D+A +L + + G P++V++N L+ +C+
Sbjct: 201 RLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEG 260
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
D + + G +V+SYN L+ G + + +M + P V +YN
Sbjct: 261 RTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYN 320
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTAT-YNVMINGLCKNGYVHNALSMFRNLQ 224
IL++ G ++A +V K++ TAT YN +I LCK G V + +
Sbjct: 321 ILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMI 380
Query: 225 RRGFVPEVLTYNALINGLCK-ARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
R P TYNA I LC+ + EA ++ + +V+ R G
Sbjct: 381 YRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNT 439
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM-MSNGVEPDLASYNT 342
++L EM G+ D Y ++ L G A E+ M S +P + ++N
Sbjct: 440 FAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNA 499
Query: 343 MIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM 398
MI + R D A+E+ + + ++ ++ T+ I++ G+ L A + LD +
Sbjct: 500 MILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 214/470 (45%), Gaps = 41/470 (8%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM-KEAG 121
+ ++CK + AE + +K+G + D +L+ +CR ++ +V + M KE
Sbjct: 202 VNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVT 261
Query: 122 LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
P+ +SY+ L+ G G + D+M E +P +Y +L+ G+ D+A
Sbjct: 262 CAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAF 321
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
+F D ++ P+ TY V+I+GLC++G + A + R + + P V+TYNALING
Sbjct: 322 NLF-DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
CK R A LL+ + +PN TF +M R G+ + + +L M G + D
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
+Y ++ L + G + A ++ M +EPD ++ +I + +QG+ D A +
Sbjct: 441 IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLG 500
Query: 362 QIEKEGPGNDQYTHTIIIHGLCKAK----------------------------------- 386
+ ++G D+ T T +I G+CK
Sbjct: 501 LMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGC 560
Query: 387 RLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYT 442
++ E + L +N LG ++V ++DGL ++G I + + E M++ + + YT
Sbjct: 561 KVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYT 620
Query: 443 ILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
I+++ LC+ R A K L A G T ++ G +++G + A
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 185/387 (47%), Gaps = 1/387 (0%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG ST+ + I ++C +DKA + + + G P+V T+ LID CR +
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
V +M + + P VI+YN+L++G + G + M + +P+V ++N LM
Sbjct: 355 ANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELME 414
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
R+G P +A + K +L P +YNV+I+GLC+ G+++ A + ++
Sbjct: 415 GLCRVGKPYKAVHLLKR-MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE 473
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P+ LT+ A+IN CK +A+ A L G + +T TT+++ + G+ L I
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFI 533
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
L + + ++ L K +V E + ++ G+ P + +Y T++ R
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
G + + +++ ++ G + Y +TIII+GLC+ R+ EA + L M G N V
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 410 SNCVLDGLGKAGHIDRALKFFEGMEVR 436
++ G G +DRAL+ M R
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVER 680
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 165/347 (47%), Gaps = 2/347 (0%)
Query: 42 NVTFRIMVKGRSL-STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDA 100
N R MVK R S N I CK ++ A +L K P+V TFN L++
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 101 YCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPD 160
CR +L+RM + GL+PD++SYN L+ G R+G + M +I PD
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Query: 161 VWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMF 220
++ +++ + + G D A+ F ++L T +I+G+CK G +AL +
Sbjct: 476 CLTFTAIINAFCKQGKADVAS-AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFIL 534
Query: 221 RNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRC 280
L + + + N +++ L K + E +L + + G P+ +T+TT+++ R
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 281 GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASY 340
G + IL M+ G + + Y ++ L + GRV EA+++ M +GV P+ +Y
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Query: 341 NTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M+ Y G++D ALE V + + G + ++ ++ G +++
Sbjct: 655 TVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 149/333 (44%), Gaps = 40/333 (12%)
Query: 200 YNVMINGLCKNGYVHNALSMFRNLQRRGFV------------------------------ 229
Y ++N LCKNGY A + + GFV
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 230 ------PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
P ++Y+ LI+GLC+ R EA L + E G +P+ T+T ++ G +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
++ + EM +G + Y ++ L + G++ EA+ + +M+ + + P + +YN +
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
I Y + GRV A EL+ +EK + T ++ GLC+ + +AV L M G
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGMEV----RDSFTYTILVHNLCRARRFLCASK 459
++V+ N ++DGL + GH++ A K M D T+T +++ C+ + AS
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497
Query: 460 HLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
L L+ G + + T +IDG+ G +A
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 166/326 (50%), Gaps = 20/326 (6%)
Query: 132 LMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSA 191
+S ++K FPMT V + N L+ + +LGM +E V++ + +
Sbjct: 173 FVSSEIKKFEFPMT---------------VSAANALIKSFGKLGMVEELLWVWRKMKENG 217
Query: 192 ETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEA 251
+P+ TYN ++NGL +V +A +F ++ P+++TYN +I G CKA + +A
Sbjct: 218 -IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 252 RRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAA 311
L + GHE + IT+ T++ C+ + + EM KG A+ V+
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 312 LVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGND 371
L K G++ E + E M+ G +P++A Y +I Y + G V++A+ L+ ++ EG D
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 372 QYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE 431
T++++++GLCK R+ EA+ + G N + + ++DGLGKAG +D A + FE
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
Query: 432 GME----VRDSFTYTILVHNLCRARR 453
M RDS+ Y L+ + R+
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRK 482
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 210/467 (44%), Gaps = 42/467 (8%)
Query: 69 AKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVIS 128
AK +D+ V + K V N LI ++ + + V +MKE G+ P + +
Sbjct: 165 AKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYT 224
Query: 129 YNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKD-- 186
YN LM+G V +F+ M I+PD+ +YN ++ Y + G +A +D
Sbjct: 225 YNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDME 284
Query: 187 ---------------------------VLLSAETD------PSTATYNVMINGLCKNGYV 213
V L E D P A ++++I GLCK G +
Sbjct: 285 TRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHA-FSLVIGGLCKEGKL 343
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
+ ++F N+ R+G P V Y LI+G K+ +A RLL + G +P+ +T++ V
Sbjct: 344 NEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVV 403
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
+N + GR+E+ L+ R G + Y +++ L K GRV EA+ + E+M G
Sbjct: 404 VNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 463
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ--YTHTIIIHGLCKAKRLNEA 391
D YN +I + + +VDEA+ L ++E+E G DQ YT+TI++ G+ K R EA
Sbjct: 464 TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE-EGCDQTVYTYTILLSGMFKEHRNEEA 522
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE---GMEVRDSFTYTILVHNL 448
++ D M G + GL +G + RA K + M V +++ L
Sbjct: 523 LKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTL 582
Query: 449 CRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
C+A R A K + G +V R +I+ L G + A K+
Sbjct: 583 CKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKL 629
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 185/413 (44%), Gaps = 4/413 (0%)
Query: 19 HPAILNHENPITSFLTQRITHSKNVTFRIMVKGR-SLSTKFLNICIASMCKAKQLDKAEC 77
P + + + ++ S F +M GR N I CKA Q KA
Sbjct: 219 EPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAME 278
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
L D G D +T+ T+I A F + + + M E G+ +++ ++ G
Sbjct: 279 KLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC 338
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
++G +F+ MI +P+V Y +L+ Y + G ++A R+ ++ P
Sbjct: 339 KEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR-MIDEGFKPDV 397
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
TY+V++NGLCKNG V AL F + G + Y++LI+GL KA R +EA RL E
Sbjct: 398 VTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 258 FREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM-RSKGYTFDGFAYCTVVAALVKTG 316
E G ++ + +++ + ++++ + + M +G + Y +++ + K
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH 517
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHT 376
R EA ++ + M+ G+ P A + + G+V A +++D++ G D
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED 577
Query: 377 IIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKF 429
+I+ LCKA R+ EA + D + G +++ L K G D A+K
Sbjct: 578 -MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKL 629
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 146/313 (46%), Gaps = 5/313 (1%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG + ++ I +CK +L++ V + ++ G P+V + LID Y + S +
Sbjct: 321 KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVED 380
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
+L RM + G PDV++Y+ +++G + G L F + + Y+ L+
Sbjct: 381 AIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLID 440
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL-QRRGF 228
+ G DEA R+F+++ T S YN +I+ K+ V A+++F+ + + G
Sbjct: 441 GLGKAGRVDEAERLFEEMSEKGCTRDSYC-YNALIDAFTKHRKVDEAIALFKRMEEEEGC 499
Query: 229 VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLE 288
V TY L++G+ K R EA +L + G P A F + G++ + +
Sbjct: 500 DQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACK 559
Query: 289 ILTEMRSKGYTFDGFAYCT-VVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLY 347
IL E+ G D A C ++ L K GR+ EA ++A+ + G E MI
Sbjct: 560 ILDELAPMGVILD--AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINAL 617
Query: 348 FRQGRVDEALELV 360
+ G+ D A++L+
Sbjct: 618 RKVGKADLAMKLM 630
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 124/285 (43%), Gaps = 1/285 (0%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG + + I K+ ++ A +L + G PDVVT++ +++ C+ +
Sbjct: 356 KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 415
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
+ + GL + + Y+SL+ G + G +F++M E D + YN L+
Sbjct: 416 ALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
+ + DEA +FK + D + TY ++++G+ K AL ++ + +G
Sbjct: 476 AFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGIT 535
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P + AL GLC + + A ++L E G +A + C + GR+++ ++
Sbjct: 536 PTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLC-KAGRIKEACKL 594
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
+ +G G ++ AL K G+ A ++ + G E
Sbjct: 595 ADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYE 639
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 213/474 (44%), Gaps = 42/474 (8%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI + +C+ + KA +L + + ++PDV ++NT+I +C + E+ MK
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
+G + ++++ L+ + G + +M + D+ Y L+ + G D
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
+F +VL ++ P TYN +I G CK G + A +F + RG P V TY LI
Sbjct: 266 GKALFDEVLERGDS-PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+GLC + EA +LL+ E EPNA+T+ ++N + G + +EI+ M+ +
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMM--SNGVEPDLASYNTMIYLYFRQGRVDEAL 357
D Y ++ L G + EA ++ M+ S+ +PD+ SYN +I+ ++ R+ +AL
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 358 ELVD-QIEKEGPGN----------------------------------DQYTHTIIIHGL 382
++ D +EK G G+ + T+T +I G
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSF--- 439
CK LN A L M ++ NC+L L K G +D+A + FE M+ ++F
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564
Query: 440 -TYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
++ I++ +A A LV + G T +I+ + G +EA
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEA 618
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 208/406 (51%), Gaps = 7/406 (1%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAG 110
G S S I I + CKA ++D+A L + +G+ D+V + +LI +C D G
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 111 CEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHC 170
+ + + E G +P I+YN+L+ G + G +F+ MIE +RP+V++Y L+
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 171 YFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVP 230
+G EA ++ ++++ + +P+ TYN++IN LCK+G V +A+ + +++R P
Sbjct: 327 LCGVGKTKEALQLL-NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 231 EVLTYNALINGLCKARRANEARRLLS-EFREAGH-EPNAITFTTVMNCCFRCGRLEQGLE 288
+ +TYN L+ GLC +EA +LL +++ + +P+ I++ +++ + RL Q L+
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 289 ILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYF 348
I + K D ++ + +K G V +A E+ +Q+ + + + +Y MI +
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505
Query: 349 RQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLV 408
+ G ++ A L+ ++ + + ++ LCK L++A + + M ++V
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 409 ASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCR 450
+ N ++DG KAG I A GM D FTY+ L++ +
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 185/388 (47%), Gaps = 17/388 (4%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
+K G +V N L+ CR + +L M+ L PDV SYN+++ G
Sbjct: 134 LKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKEL 193
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV-LLSAETDPSTATYN 201
L + ++M S + ++ IL+ + + G DEA K++ + E D Y
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEAD--LVVYT 251
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
+I G C G + ++F + RG P +TYN LI G CK + EA + E
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
G PN T+T +++ G+ ++ L++L M K + Y ++ L K G V +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ--YTHTIII 379
EI E M PD +YN ++ +G +DEA +L+ + K+ D ++ +I
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 380 HGLCKAKRLNEAVQHLDHM-NSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME---- 434
HGLCK RL++A+ D + LG G + V +N +L+ KAG +++A++ ++ +
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAG-DRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 435 VRDSFTYTILVHNLCR------ARRFLC 456
VR+S TYT ++ C+ A+ LC
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 194/414 (46%), Gaps = 6/414 (1%)
Query: 47 IMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVS 106
++ +G S N I CK QL +A + ++ GV P+V T+ LID C
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 107 FDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNI 166
++L M E P+ ++YN +++ + GL + + + M + RPD +YNI
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 167 LMHCYFRLGMPDEANRVFKDVLL-SAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
L+ G DEA+++ +L S+ TDP +YN +I+GLCK +H AL ++ L
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQ 285
+ + +T N L+N KA N+A L + ++ N+ T+T +++ + G L
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 286 GLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIY 345
+L +MR F Y ++++L K G + +A + E+M + PD+ S+N MI
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 346 LYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGF 405
+ G + A L+ + + G D +T++ +I+ K L+EA+ D M GF
Sbjct: 573 GSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Query: 406 NLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNL-CRARRFLCAS 458
+ + VL G D+ + + + +D +L L C ++C S
Sbjct: 633 DAHICDSVLKYCISQGETDKLTELVKKLVDKD----IVLDKELTCTVMDYMCNS 682
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 193/422 (45%), Gaps = 50/422 (11%)
Query: 130 NSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLL 189
N+LM+ VR + + KM+E++ + S + L+ CY ++ A V ++L
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA-LML 134
Query: 190 SAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLC------ 243
+ +N+++ GLC+N A+S+ R ++R +P+V +YN +I G C
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194
Query: 244 -----------------------------KARRANEARRLLSEFREAGHEPNAITFTTVM 274
KA + +EA L E + G E + + +T+++
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 275 NCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
CG L++G + E+ +G + Y T++ K G++ EA EI E M+ GV
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 335 PDLASYNTMIYLYFRQGRVDEALELVD-QIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
P++ +Y +I G+ EAL+L++ IEK+ N T+ III+ LCK + +AV+
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN-AVTYNIIINKLCKDGLVADAVE 373
Query: 394 HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFT------YTILVHN 447
++ M + + N +L GL G +D A K M S+T Y L+H
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 448 LCRARRF---LCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQL 504
LC+ R L LV L G +V T +++ + G N+A ++ +I +++
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRV---TTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 505 LR 506
+R
Sbjct: 491 VR 492
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 143/310 (46%), Gaps = 17/310 (5%)
Query: 29 ITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVL 88
I + +R T N+T+ I++ G +C LD+A +L +K
Sbjct: 374 IVELMKKRRTRPDNITYNILLGG--------------LCAKGDLDEASKLLYLMLKDSSY 419
Query: 89 --PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTL 146
PDV+++N LI C+ ++ + + E D ++ N L++ ++ G +
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479
Query: 147 HMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMING 206
++ ++ +S+I + +Y ++ + + GM + A + + +S E PS YN +++
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS-ELQPSVFDYNCLLSS 538
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
LCK G + A +F +QR P+V+++N +I+G KA A LL AG P+
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPD 598
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
T++ ++N + G L++ + +M G+ D +V+ + G + E+ +
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVK 658
Query: 327 QMMSNGVEPD 336
+++ + D
Sbjct: 659 KLVDKDIVLD 668
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 177/367 (48%), Gaps = 7/367 (1%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
GV PD+VT N ++ AY + E MK A + PD ++N ++ + G
Sbjct: 111 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 170
Query: 146 LHMFDKMIE--SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
L +F+ M E +E RPDV ++ +MH Y G + VF + +++ P+ +YN +
Sbjct: 171 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF-EAMVAEGLKPNIVSYNAL 229
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
+ +G ALS+ ++++ G +P+V++Y L+N ++R+ +A+ + R+
Sbjct: 230 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 289
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
+PN +T+ +++ G L + +EI +M G + + CT++AA ++ + V D
Sbjct: 290 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 349
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
+ S G+ + A+YN+ I Y +++A+ L + K+ D T TI+I G C
Sbjct: 350 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 409
Query: 384 KAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSF 439
+ + EA+ +L M L + VL K G + A F M++ D
Sbjct: 410 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 469
Query: 440 TYTILVH 446
YT ++H
Sbjct: 470 AYTSMLH 476
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 187/407 (45%), Gaps = 6/407 (1%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMVKGRSL--STKFLNICIASMCKAKQLDKAEC 77
P ++ H ++++ + R +SK +++ ++KG + T NI I + K Q +A
Sbjct: 114 PDLVTHNIVLSAYKSGR-QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALD 172
Query: 78 VL--IDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSG 135
+ + + PDVVTF +++ Y + V E M GL P+++SYN+LM
Sbjct: 173 LFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 232
Query: 136 AVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDP 195
G+ L + + ++ I PDV SY L++ Y R P +A VF ++ P
Sbjct: 233 YAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKP 291
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
+ TYN +I+ NG++ A+ +FR +++ G P V++ L+ ++++ +L
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Query: 256 SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT 315
S + G N + + + LE+ + + MR K D + +++ +
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
Query: 316 GRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTH 375
+ EA ++M + Y++++ Y +QG+V EA + +Q++ G D +
Sbjct: 412 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 471
Query: 376 TIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
T ++H +++ +A + M + G + +A + ++ K G
Sbjct: 472 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 518
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 143/308 (46%), Gaps = 3/308 (0%)
Query: 129 YNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL 188
YN ++ R +F +M + +PD +Y+ L++ + R G A + D +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD-M 72
Query: 189 LSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRA 248
L A PS +TYN +IN +G AL + + + G P+++T+N +++ R+
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 249 NEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF--DGFAYC 306
++A + A P+ TF ++ C + G+ Q L++ MR K D +
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 307 TVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE 366
+++ G + + E M++ G++P++ SYN ++ Y G AL ++ I++
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 367 GPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRA 426
G D ++T +++ ++++ +A + M N+V N ++D G G + A
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 427 LKFFEGME 434
++ F ME
Sbjct: 313 VEIFRQME 320
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 6/302 (1%)
Query: 200 YNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR 259
YN+MI ++ +V A +F +Q+ P+ TY+ALIN +A + A L+ +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 260 EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVV 319
A P+ T+ ++N C G + LE+ +M G D + V++A +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQI-EKEGPGN-DQYTHTI 377
+A E M V PD ++N +IY + G+ +AL+L + + EK D T T
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 378 IIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME--- 434
I+H + + M + G N+V+ N ++ G AL ++
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 435 -VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAK 493
+ D +YT L+++ R+R+ A + + + + T A+ID S+G EA
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 494 KV 495
++
Sbjct: 314 EI 315
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 185/373 (49%), Gaps = 2/373 (0%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
+ + S+ K + D + VKLGV+ ++ +N L+ A + + ++L M+E
Sbjct: 173 VLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK 232
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
G+ PD+ +YN+L+S +K + L + D+M S + P++ +YN +H + R G EA
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
R+F+++ + + TY +I+G C+ + AL + ++ RGF P V+TYN+++
Sbjct: 293 TRLFREI--KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILR 350
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
LC+ R EA RLL+E EP+ IT T++N + + +++ +M G
Sbjct: 351 KLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKL 410
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
D ++Y ++ K + A E M+ G P A+Y+ ++ ++ Q + DE +L+
Sbjct: 411 DMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLL 470
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
++ EK G D + +I +CK ++++ A + M G + V + +
Sbjct: 471 EEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRT 530
Query: 421 GHIDRALKFFEGM 433
G + A F+ M
Sbjct: 531 GKVTEASALFDVM 543
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 175/361 (48%), Gaps = 6/361 (1%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
F+ L+ Y + + V E+++ GL P + + L++ V++ L +F KM+
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
+ + ++ YN+L+H + G P++A ++ + + P TYN +I+ CK
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSE-MEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
ALS+ ++R G P ++TYN+ I+G + R EA RL E ++ N +T+TT+
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTL 313
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
++ R +++ L + M S+G++ Y +++ L + GR+ EA+ + +M +
Sbjct: 314 IDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI 373
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
EPD + NT+I Y + + A+++ ++ + G D Y++ +IHG CK L A +
Sbjct: 374 EPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKE 433
Query: 394 HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLC 449
L M GF + ++DG D K E E R D Y L+ +C
Sbjct: 434 ELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRIC 493
Query: 450 R 450
+
Sbjct: 494 K 494
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 182/380 (47%), Gaps = 3/380 (0%)
Query: 29 ITSFLTQRITHSKNVTFRIMVK-GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGV 87
+ S + QR+T + F+ MVK G + N+ + + K+ +KAE +L + + GV
Sbjct: 175 LNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGV 234
Query: 88 LPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLH 147
PD+ T+NTLI YC+ V +RM+ +G+ P++++YNS + G R+G
Sbjct: 235 FPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATR 294
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
+F + I+ ++ + +Y L+ Y R+ DEA R+ ++V+ S P TYN ++ L
Sbjct: 295 LF-REIKDDVTANHVTYTTLIDGYCRMNDIDEALRL-REVMESRGFSPGVVTYNSILRKL 352
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
C++G + A + + + P+ +T N LIN CK A ++ + E+G + +
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
++ +++ + LE E L M KG++ Y +V + E ++ E+
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
G+ D+A Y +I + +VD A L + +EK+G D T + + + +
Sbjct: 473 FEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGK 532
Query: 388 LNEAVQHLDHMNSLGFGFNL 407
+ EA D M + NL
Sbjct: 533 VTEASALFDVMYNRRLMVNL 552
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 173/377 (45%), Gaps = 6/377 (1%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G+ P + L+++ + D ++ ++M + G+ ++ YN L+ + G
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+ +M E + PD+++YN L+ Y + M EA V +D + + P+ TYN I+
Sbjct: 223 EKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSV-QDRMERSGVAPNIVTYNSFIH 281
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
G + G + A +FR + + +TY LI+G C+ +EA RL G P
Sbjct: 282 GFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSP 340
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
+T+ +++ GR+ + +LTEM K D T++ A K +V A ++
Sbjct: 341 GVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVK 400
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
++M+ +G++ D+ SY +I+ + + ++ A E + + ++G T++ ++ G
Sbjct: 401 KKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQ 460
Query: 386 KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTY 441
+ +E + L+ G ++ ++ + K +D A FE ME V DS +
Sbjct: 461 NKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIF 520
Query: 442 TILVHNLCRARRFLCAS 458
T + + R + AS
Sbjct: 521 TTMAYAYWRTGKVTEAS 537
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 156/354 (44%), Gaps = 42/354 (11%)
Query: 183 VFKDVLLSAETDPSTAT--YNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
V + ++ DP + ++ ++ K G +++++ +F ++ G P + L+N
Sbjct: 117 VLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLN 176
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
L K R + ++ + + G N + +++ C + G E+ ++L+EM KG
Sbjct: 177 SLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFP 236
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
D F Y T+++ K EA + ++M +GV P++ +YN+ I+ + R+GR+ EA L
Sbjct: 237 DIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF 296
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
+I+ + N T+T +I G C+ ++EA++ + M S GF +V N +L L +
Sbjct: 297 REIKDDVTAN-HVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCED 355
Query: 421 GHIDRALKFFEGMEVR---------------------------------------DSFTY 441
G I A + M + D ++Y
Sbjct: 356 GRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSY 415
Query: 442 TILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
L+H C+ A + L + ++ GF AT ++DG + ++E K+
Sbjct: 416 KALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKL 469
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 177/367 (48%), Gaps = 7/367 (1%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
GV PD+VT N ++ AY + E MK A + PD ++N ++ + G
Sbjct: 243 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 302
Query: 146 LHMFDKMIE--SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
L +F+ M E +E RPDV ++ +MH Y G + VF + +++ P+ +YN +
Sbjct: 303 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF-EAMVAEGLKPNIVSYNAL 361
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
+ +G ALS+ ++++ G +P+V++Y L+N ++R+ +A+ + R+
Sbjct: 362 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 421
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
+PN +T+ +++ G L + +EI +M G + + CT++AA ++ + V D
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 481
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
+ S G+ + A+YN+ I Y +++A+ L + K+ D T TI+I G C
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Query: 384 KAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSF 439
+ + EA+ +L M L + VL K G + A F M++ D
Sbjct: 542 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 601
Query: 440 TYTILVH 446
YT ++H
Sbjct: 602 AYTSMLH 608
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 187/407 (45%), Gaps = 6/407 (1%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMVKGRSL--STKFLNICIASMCKAKQLDKAEC 77
P ++ H ++++ + R +SK +++ ++KG + T NI I + K Q +A
Sbjct: 246 PDLVTHNIVLSAYKSGR-QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALD 304
Query: 78 VL--IDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSG 135
+ + + PDVVTF +++ Y + V E M GL P+++SYN+LM
Sbjct: 305 LFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 364
Query: 136 AVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDP 195
G+ L + + ++ I PDV SY L++ Y R P +A VF ++ P
Sbjct: 365 YAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKP 423
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
+ TYN +I+ NG++ A+ +FR +++ G P V++ L+ ++++ +L
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Query: 256 SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT 315
S + G N + + + LE+ + + MR K D + +++ +
Sbjct: 484 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 543
Query: 316 GRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTH 375
+ EA ++M + Y++++ Y +QG+V EA + +Q++ G D +
Sbjct: 544 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 603
Query: 376 TIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
T ++H +++ +A + M + G + +A + ++ K G
Sbjct: 604 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 650
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 143/308 (46%), Gaps = 3/308 (0%)
Query: 129 YNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL 188
YN ++ R +F +M + +PD +Y+ L++ + R G A + D +
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD-M 204
Query: 189 LSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRA 248
L A PS +TYN +IN +G AL + + + G P+++T+N +++ R+
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 249 NEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF--DGFAYC 306
++A + A P+ TF ++ C + G+ Q L++ MR K D +
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 307 TVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE 366
+++ G + + E M++ G++P++ SYN ++ Y G AL ++ I++
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 367 GPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRA 426
G D ++T +++ ++++ +A + M N+V N ++D G G + A
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 444
Query: 427 LKFFEGME 434
++ F ME
Sbjct: 445 VEIFRQME 452
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 6/319 (1%)
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
VFK + + YN+MI ++ +V A +F +Q+ P+ TY+ALIN
Sbjct: 129 VFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAH 188
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
+A + A L+ + A P+ T+ ++N C G + LE+ +M G D
Sbjct: 189 GRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDL 248
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
+ V++A + +A E M V PD ++N +IY + G+ +AL+L +
Sbjct: 249 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS 308
Query: 363 IEKEGPG--NDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
+ ++ D T T I+H + + M + G N+V+ N ++
Sbjct: 309 MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Query: 421 GHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATR 476
G AL ++ + D +YT L+++ R+R+ A + + + + T
Sbjct: 369 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Query: 477 RAVIDGLISDGLKNEAKKV 495
A+ID S+G EA ++
Sbjct: 429 NALIDAYGSNGFLAEAVEI 447
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 196/445 (44%), Gaps = 41/445 (9%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT 96
I +++NV + V+G + + + + ++ +A+ L ++ G +PD T
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 257
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
++ A C + +M + G P++I++ SL+ G +KG M ++M+ +
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
+P+V+ T+ +I+GLCK G+ A
Sbjct: 318 WKPNVY------------------------------------THTALIDGLCKRGWTEKA 341
Query: 217 LSMFRNLQRRG-FVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
+F L R + P V TY ++I G CK + N A L S +E G PN T+TT++N
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 276 CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
+ G + E++ M +G+ + + Y + +L K R EA E+ + S G+E
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 336 DLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHL 395
D +Y +I +Q +++AL ++ K G D + I+I C+ K++ E+ +
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 396 DHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRA 451
+ SLG ++ K G ID ALK+F M+ V DSFTY L+ LC+
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Query: 452 RRFLCASKHLVACLQCGFQVLKATR 476
A K A + G + TR
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTR 606
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 177/377 (46%), Gaps = 8/377 (2%)
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
M+ GLTP I+ N ++ AV GL ++FD+M + PD SY +++ FR G
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYN 236
EA+R ++ P AT +++ LC+NG V+ A+ FR + GF P ++ +
Sbjct: 233 IQEADRWLTGMIQRGFI-PDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 237 ALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM-RS 295
+LI+GLCK +A +L E G +PN T T +++ + G E+ + ++ RS
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDE 355
Y + Y +++ K ++ A+ + +M G+ P++ +Y T+I + + G
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 356 ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD 415
A EL++ + EG + YT+ I LCK R EA + L+ S G + V ++
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Query: 416 GLGKAGHIDRALKFF-----EGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQ 470
K I++AL FF G E D IL+ CR ++ + + + G
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEA-DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 530
Query: 471 VLKATRRAVIDGLISDG 487
K T ++I +G
Sbjct: 531 PTKETYTSMISCYCKEG 547
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 157/332 (47%), Gaps = 9/332 (2%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVL-PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAG 121
I +CK +KA + + V+ P+V T+ ++I YC+ + + RMKE G
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388
Query: 122 LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
L P+V +Y +L++G + G F + + M + P++++YN + + EA
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
+ S + TY ++I CK ++ AL+ F + + GF ++ N LI
Sbjct: 449 ELLNKAF-SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
C+ ++ E+ RL G P T+T++++C + G ++ L+ M+ G D
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
F Y ++++ L K V EA ++ E M+ G+ P + T+ Y Y ++ A+ L++
Sbjct: 568 SFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627
Query: 362 QIEKEGPGNDQYTHTI--IIHGLCKAKRLNEA 391
++K+ + T+ ++ LC K++ A
Sbjct: 628 PLDKK-----LWIRTVRTLVRKLCSEKKVGVA 654
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 137/295 (46%), Gaps = 5/295 (1%)
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
M+ + G ++ A+ M ++Q +G P +T N ++ + A + E G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
P++ ++ ++ CFR G++++ LT M +G+ D ++ AL + G V A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+M+ G +P+L ++ ++I ++G + +A E+++++ + G + YTHT +I GL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 383 CKAKRLNEAVQ-HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSF-- 439
CK +A + L + S + N+ ++ G K ++RA F M+ + F
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 440 --TYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
TYT L++ C+A F A + + GF T A ID L EA
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 147/323 (45%), Gaps = 10/323 (3%)
Query: 167 LMHCYFR----LGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRN 222
+M C R +G +EA + D+ T PS+ T N ++ + G + A ++F
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLT-PSSITMNCVLEIAVELGLIEYAENVFDE 207
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
+ RG VP+ +Y ++ G + + EA R L+ + G P+ T T ++ G
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
+ + + +M G+ + + +++ L K G + +A E+ E+M+ NG +P++ ++
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 343 MIYLYFRQGRVDEALEL-VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
+I ++G ++A L + + + + +T+T +I G CK +LN A M
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 402 GFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCA 457
G N+ +++G KAG RA + M + + +TY + +LC+ R A
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 458 SKHLVACLQCGFQVLKATRRAVI 480
+ L CG + T +I
Sbjct: 448 YELLNKAFSCGLEADGVTYTILI 470
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 35/234 (14%)
Query: 273 VMNCCFR----CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
VM C R GRL + + ++ +M+++G T V+ V+ G + A+ + ++M
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
GV PD +SY M+ FR G++ EA + + + G D T T+I+ LC+ +
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 268
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNL 448
N A+ + M LGF NL+ ++DGL K G I +A + E M VR+ + + H
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM-VRNGWKPNVYTHT- 326
Query: 449 CRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKA 502
A+IDGL G +A ++ LK+ ++
Sbjct: 327 -----------------------------ALIDGLCKRGWTEKAFRLFLKLVRS 351
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 93/238 (39%), Gaps = 40/238 (16%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI IA+ C+ K++ ++E + V LG++P T+ ++I YC+ D + MK
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G PD +Y SL+SG +K + +++ MI+ + P E
Sbjct: 562 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS------------------PPE 603
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
RV T Y CK NA+ + L ++ ++ V T L+
Sbjct: 604 VTRV-------------TLAYEY-----CKRNDSANAMILLEPLDKKLWIRTVRT---LV 642
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LC ++ A + E + +T C G+ + LTE S+G
Sbjct: 643 RKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK-NNLVTDLTERISRG 699
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 202/427 (47%), Gaps = 10/427 (2%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I+ +CK K+ D + +L D LG +PD+ FN +D CR + M + G
Sbjct: 86 ISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGR 145
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PDV+SY L++G R G + +++ MI S + PD + L+ D A
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+ + + SA ST YN +I+G CK G + A ++ + + G P+++TYN L+N
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILT-EMRSKGYTFD 301
A +++E +G + +A ++ ++ R ++ + EM +G+ D
Sbjct: 266 YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-D 324
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
+Y T++ + +A + E+M G+ ++ +Y ++I + R+G A +L+D
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 362 QIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
Q+ + G D+ +T I+ LCK+ +++A + M + ++ N ++ GL ++G
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 422 HIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRR 477
+ A+K FE M+ + D T+ ++ L R ++ A K + GF + R
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTL----DR 500
Query: 478 AVIDGLI 484
V D LI
Sbjct: 501 DVSDTLI 507
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 185/406 (45%), Gaps = 14/406 (3%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I + + + + AE + D +G T++ I C+ FD +L M+ G
Sbjct: 51 IGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGF 110
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PD+ ++N + R+ + F M++ PDV SY IL++ FR G +A
Sbjct: 111 IPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVE 170
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVP-EVLTYNALING 241
++ + ++ + P ++ GLC V A M + V + YNALI+G
Sbjct: 171 IW-NAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISG 229
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
CKA R +A L S + G EP+ +T+ ++N + L++ ++ EM G D
Sbjct: 230 FCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLD 289
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP----DLASYNTMIYLYFRQGRVDEAL 357
++Y + L + RV D+ M +EP D+ SY+T+I + R +A
Sbjct: 290 AYSYNQL---LKRHCRVSHPDK-CYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAY 345
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
L +++ ++G + T+T +I + + A + LD M LG + + +LD L
Sbjct: 346 RLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHL 405
Query: 418 GKAGHIDRALKFFEGM---EVR-DSFTYTILVHNLCRARRFLCASK 459
K+G++D+A F M E+ D+ +Y L+ LCR+ R A K
Sbjct: 406 CKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIK 451
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 178/374 (47%), Gaps = 5/374 (1%)
Query: 44 TFRIMV-KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYC 102
TF MV +GR I I + +A ++ A + ++ GV PD L+ C
Sbjct: 136 TFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLC 195
Query: 103 RFVSFDAGCE-VLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDV 161
D E V E +K A + + YN+L+SG + G + M + PD+
Sbjct: 196 HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDL 255
Query: 162 WSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALS-MF 220
+YN+L++ Y+ M A V +++ S +YN ++ C+ + + M
Sbjct: 256 VTYNVLLNYYYDNNMLKRAEGVMAEMVRSG-IQLDAYSYNQLLKRHCRVSHPDKCYNFMV 314
Query: 221 RNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRC 280
+ ++ RGF +V++Y+ LI C+A +A RL E R+ G N +T+T+++ R
Sbjct: 315 KEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 281 GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASY 340
G ++L +M G + D Y T++ L K+G V +A + M+ + + PD SY
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 341 NTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNS 400
N++I R GRV EA++L + ++ + D+ T II GL + K+L+ A + D M
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMD 493
Query: 401 LGFGFNLVASNCVL 414
GF + S+ ++
Sbjct: 494 KGFTLDRDVSDTLI 507
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 167/357 (46%), Gaps = 10/357 (2%)
Query: 32 FLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLG-VLPD 90
F ++T + + ++ G S K + +C A+++D A ++ + +K V
Sbjct: 160 FRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLS 219
Query: 91 VVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFD 150
V +N LI +C+ + + M + G PD+++YN L++ + +
Sbjct: 220 TVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMA 279
Query: 151 KMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDP----STATYNVMING 206
+M+ S I+ D +SYN L+ + R+ PD+ + E +P +Y+ +I
Sbjct: 280 EMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN-----FMVKEMEPRGFCDVVSYSTLIET 334
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
C+ A +F ++++G V V+TY +LI + ++ A++LL + E G P+
Sbjct: 335 FCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
I +TT+++ + G +++ + +M T D +Y ++++ L ++GRV EA ++ E
Sbjct: 395 RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
M PD ++ +I R ++ A ++ DQ+ +G D+ +I C
Sbjct: 455 DMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 169/375 (45%), Gaps = 8/375 (2%)
Query: 127 ISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKD 186
++Y S ++ V+ G+ + +FD+M S R + YN + R + A ++ D
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 187 VL-LSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKA 245
+ + P TY+ I+GLCK ++ +++ GF+P++ +N ++ LC+
Sbjct: 70 MKPMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRE 127
Query: 246 RRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAY 305
+ A + + G EP+ +++T ++N FR G++ +EI M G + D A
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC 187
Query: 306 CTVVAALVKTGRVVEADE-IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIE 364
+V L +V A E +AE++ S V+ YN +I + + GR+++A L +
Sbjct: 188 AALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMS 247
Query: 365 KEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHID 424
K G D T+ ++++ L A + M G + + N +L + H D
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD 307
Query: 425 RALKFF-EGMEVR---DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVI 480
+ F + ME R D +Y+ L+ CRA A + Q G + T ++I
Sbjct: 308 KCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLI 367
Query: 481 DGLISDGLKNEAKKV 495
+ +G + AKK+
Sbjct: 368 KAFLREGNSSVAKKL 382
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 191/396 (48%), Gaps = 6/396 (1%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ +C+ ++L+ A L + P VV+FN+++ YC+ D + + GL
Sbjct: 194 VDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGL 253
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P V S+N L++G G L + M + + PD +YNIL + LGM A
Sbjct: 254 VPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWE 313
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF-VPEVLTYNALING 241
V +D +L P TY +++ G C+ G + L + +++ RGF + ++ + +++G
Sbjct: 314 VIRD-MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG 372
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
LCK R +EA L ++ + G P+ + ++ V++ + G+ + L + EM K +
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
+ ++ L + G ++EA + + ++S+G D+ YN +I Y + G ++EALEL
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 362 QIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
+ + G T +I+G CK + + EA + LD + G ++V+ ++D G
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 422 HIDRALKFFEGMEVR----DSFTYTILVHNLCRARR 453
+ + M+ + TY+++ LCR +
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 200/442 (45%), Gaps = 51/442 (11%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N ++ CK +D A+ +K G++P V + N LI+ C S E+ M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
+ G+ PD ++YN L G G+ + M++ + PDV +Y IL+ +LG D
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+ KD+L S +VM++GLCK G + ALS+F ++ G P+++ Y+ +
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I+GLCK + + A L E + PN+ T ++ + G L + +L + S G
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
T D Y V+ K+G + EA E+ + ++ G+ P +A++N++IY Y + + EA +
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARK 524
Query: 359 LVD-----------------------------------QIEKEGPGNDQYTHTIIIHGLC 383
++D +++ EG T+++I GLC
Sbjct: 525 ILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC 584
Query: 384 KAKR-------LNEAV-----QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE 431
+ + L E + Q L M S G + + N ++ L + H+ A F E
Sbjct: 585 RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 644
Query: 432 GMEVRD----SFTYTILVHNLC 449
M+ R+ S TY IL+ +LC
Sbjct: 645 IMKSRNLDASSATYNILIDSLC 666
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 204/459 (44%), Gaps = 29/459 (6%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGV-LPDVVTFN 95
I+ + V ++ KG S I + C+ +D +L D + G L ++ +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
++ C+ D + +MK GL+PD+++Y+ ++ G + G F M L ++D+M +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN 215
I P+ ++ L+ + GM EA + ++ S ET YN++I+G K+G +
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET-LDIVLYNIVIDGYAKSGCIEE 486
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
AL +F+ + G P V T+N+LI G CK + EAR++L + G P+ +++TT+M+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 276 CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
CG + E+ EM+++G Y + L + + + + +
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRER------- 599
Query: 336 DLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHL 395
I+ +QG D +E EG DQ T+ II LC+ K L+ A L
Sbjct: 600 --------IFEKCKQGLRD--------MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 396 DHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD----SFTYTILVHNLCRA 451
+ M S + N ++D L G+I +A F ++ ++ F YT L+ C
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVK 703
Query: 452 RRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKN 490
A K L GF V AVI+ L L N
Sbjct: 704 GDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 194/411 (47%), Gaps = 50/411 (12%)
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
+ ++ L+ R D +L++MK+ L SYNS++ F T M+D
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYH------FRETDKMWD- 177
Query: 152 MIESEIR-PDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKN 210
+ EI+ + +Y+ ++ R ++A +F + PS ++N +++G CK
Sbjct: 178 -VYKEIKDKNEHTYSTVVDGLCRQQKLEDA-VLFLRTSEWKDIGPSVVSFNSIMSGYCKL 235
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
G+V A S F + + G VP V ++N LINGLC EA L S+ + G EP+++T+
Sbjct: 236 GFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTY 295
Query: 271 ---------------------------------TTVMNCCFRC--GRLEQGLEILTEMRS 295
T + C +C G ++ GL +L +M S
Sbjct: 296 NILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Query: 296 KGYTFDGFAYCTV-VAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
+G+ + C+V ++ L KTGR+ EA + QM ++G+ PDL +Y+ +I+ + G+ D
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415
Query: 355 EALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL 414
AL L D++ + + TH ++ GLC+ L EA LD + S G ++V N V+
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 415 DGLGKAGHIDRALKFF----EGMEVRDSFTYTILVHNLCRARRFLCASKHL 461
DG K+G I+ AL+ F E T+ L++ C+ + A K L
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 191/396 (48%), Gaps = 6/396 (1%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ +C+ ++L+ A L + P VV+FN+++ YC+ D + + GL
Sbjct: 194 VDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGL 253
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P V S+N L++G G L + M + + PD +YNIL + LGM A
Sbjct: 254 VPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWE 313
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF-VPEVLTYNALING 241
V +D +L P TY +++ G C+ G + L + +++ RGF + ++ + +++G
Sbjct: 314 VIRD-MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG 372
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
LCK R +EA L ++ + G P+ + ++ V++ + G+ + L + EM K +
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
+ ++ L + G ++EA + + ++S+G D+ YN +I Y + G ++EALEL
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 362 QIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
+ + G T +I+G CK + + EA + LD + G ++V+ ++D G
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 422 HIDRALKFFEGMEVR----DSFTYTILVHNLCRARR 453
+ + M+ + TY+++ LCR +
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 200/442 (45%), Gaps = 51/442 (11%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N ++ CK +D A+ +K G++P V + N LI+ C S E+ M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
+ G+ PD ++YN L G G+ + M++ + PDV +Y IL+ +LG D
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+ KD+L S +VM++GLCK G + ALS+F ++ G P+++ Y+ +
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I+GLCK + + A L E + PN+ T ++ + G L + +L + S G
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
T D Y V+ K+G + EA E+ + ++ G+ P +A++N++IY Y + + EA +
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARK 524
Query: 359 LVD-----------------------------------QIEKEGPGNDQYTHTIIIHGLC 383
++D +++ EG T+++I GLC
Sbjct: 525 ILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC 584
Query: 384 KAKR-------LNEAV-----QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE 431
+ + L E + Q L M S G + + N ++ L + H+ A F E
Sbjct: 585 RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 644
Query: 432 GMEVRD----SFTYTILVHNLC 449
M+ R+ S TY IL+ +LC
Sbjct: 645 IMKSRNLDASSATYNILIDSLC 666
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 204/459 (44%), Gaps = 29/459 (6%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGV-LPDVVTFN 95
I+ + V ++ KG S I + C+ +D +L D + G L ++ +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
++ C+ D + +MK GL+PD+++Y+ ++ G + G F M L ++D+M +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN 215
I P+ ++ L+ + GM EA + ++ S ET YN++I+G K+G +
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET-LDIVLYNIVIDGYAKSGCIEE 486
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
AL +F+ + G P V T+N+LI G CK + EAR++L + G P+ +++TT+M+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 276 CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
CG + E+ EM+++G Y + L + + + + +
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRER------- 599
Query: 336 DLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHL 395
I+ +QG D +E EG DQ T+ II LC+ K L+ A L
Sbjct: 600 --------IFEKCKQGLRD--------MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 396 DHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD----SFTYTILVHNLCRA 451
+ M S + N ++D L G+I +A F ++ ++ F YT L+ C
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVK 703
Query: 452 RRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKN 490
A K L GF V AVI+ L L N
Sbjct: 704 GDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 194/411 (47%), Gaps = 50/411 (12%)
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
+ ++ L+ R D +L++MK+ L SYNS++ F T M+D
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYH------FRETDKMWD- 177
Query: 152 MIESEIR-PDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKN 210
+ EI+ + +Y+ ++ R ++A +F + PS ++N +++G CK
Sbjct: 178 -VYKEIKDKNEHTYSTVVDGLCRQQKLEDA-VLFLRTSEWKDIGPSVVSFNSIMSGYCKL 235
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
G+V A S F + + G VP V ++N LINGLC EA L S+ + G EP+++T+
Sbjct: 236 GFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTY 295
Query: 271 ---------------------------------TTVMNCCFRC--GRLEQGLEILTEMRS 295
T + C +C G ++ GL +L +M S
Sbjct: 296 NILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Query: 296 KGYTFDGFAYCTV-VAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
+G+ + C+V ++ L KTGR+ EA + QM ++G+ PDL +Y+ +I+ + G+ D
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415
Query: 355 EALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL 414
AL L D++ + + TH ++ GLC+ L EA LD + S G ++V N V+
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 415 DGLGKAGHIDRALKFF----EGMEVRDSFTYTILVHNLCRARRFLCASKHL 461
DG K+G I+ AL+ F E T+ L++ C+ + A K L
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 203/448 (45%), Gaps = 81/448 (18%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G P+VVTF TLI+ +C+ D ++ + M++ G+ PD+I+Y++L+ G + G+ M
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL----------------- 188
+F + + ++ DV ++ + Y + G A+ V+K +L
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 189 -----------------LSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
L +PS TY+ +I+G CK G + + +++ ++ + G+ P+
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 232 VLTY-----------------------------------NALINGLCKARRANEARRLLS 256
V+ Y N+LI+G C+ R +EA ++
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 257 EFREAGHEPNAITFTTVMNCCFR----CGRLEQ--GLEILTEMRSKGYTFDGFAYCTVVA 310
G +P+ TFTTVM C ++ GL++ M+ + D A C VV
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD-IAVCNVVI 579
Query: 311 ALV-KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPG 369
L+ K R+ +A + ++ +EPD+ +YNTMI Y R+DEA + + ++ G
Sbjct: 580 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 639
Query: 370 NDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKF 429
+ T TI+IH LCK ++ A++ M G N V C++D K+ I+ + K
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 430 FEGMEVR----DSFTYTILVHNLCRARR 453
FE M+ + +Y+I++ LC+ R
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGR 727
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 147/289 (50%), Gaps = 7/289 (2%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF------P 143
+VV FN+LID +CR FD +V M G+ PDV ++ ++M ++ + F
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT 554
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
+ L +FD M ++I D+ N+++H F+ ++A++ F + L+ + +P TYN M
Sbjct: 555 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN-LIEGKMEPDIVTYNTM 613
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
I G C + A +F L+ F P +T LI+ LCK + A R+ S E G
Sbjct: 614 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 673
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
+PNA+T+ +M+ + +E ++ EM+ KG + +Y ++ L K GRV EA
Sbjct: 674 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 733
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ 372
I Q + + PD+ +Y +I Y + GR+ EA L + + + G D
Sbjct: 734 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 782
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 183/404 (45%), Gaps = 19/404 (4%)
Query: 64 ASMCKA---KQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
A CK K LD V+ G ++G+ V+ N ++ + +L + +
Sbjct: 226 ALFCKGEVTKALDFHRLVMERGFRVGI----VSCNKVLKGL-SVDQIEVASRLLSLVLDC 280
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
G P+V+++ +L++G ++G +F M + I PD+ +Y+ L+ YF+ GM
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
+++F L ++ I+ K+G + A +++ + +G P V+TY LI
Sbjct: 341 HKLFSQALHKG-VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
GLC+ R EA + + + G EP+ +T++++++ +CG L G + +M GY
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
D Y +V L K G ++ A + +M+ + ++ +N++I + R R DEAL++
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 361 DQIEKEGPGNDQYTHTIIIH------GLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL 414
+ G D T T ++ CK + +Q D M ++ N V+
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 579
Query: 415 DGLGKAGHIDRALKFF----EGMEVRDSFTYTILVHNLCRARRF 454
L K I+ A KFF EG D TY ++ C RR
Sbjct: 580 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 188/396 (47%), Gaps = 11/396 (2%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
R++ +G S + I I +C+ ++ +A + +K G+ P +VT+++LID +C+
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
+ +G + E M + G PDV+ Y L+ G ++GL + KM+ IR +V +N
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATY------NVMINGLCKNGYVHNALSM 219
L+ + RL DEA +VF+ + + P AT+ ++M + CK+ L +
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYG-IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQL 559
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
F +QR ++ N +I+ L K R +A + + E EP+ +T+ T++ C
Sbjct: 560 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI--CGY 617
Query: 280 CG--RLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDL 337
C RL++ I ++ + + ++ L K + A + M G +P+
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 338 ASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
+Y ++ + + ++ + +L ++++++G +++III GLCK R++EA
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Query: 398 MNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
++VA ++ G K G + A +E M
Sbjct: 738 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 155/320 (48%), Gaps = 13/320 (4%)
Query: 39 HSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLI 98
H+ + +++ + L+ N I C+ + D+A V G+ PDV TF T++
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 99 ------DAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
DA+C+ + G ++ + M+ ++ D+ N ++ + F+ +
Sbjct: 539 RVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 598
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
IE ++ PD+ +YN ++ Y L DEA R+F ++L P+T T ++I+ LCKN
Sbjct: 599 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNND 657
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
+ A+ MF + +G P +TY L++ K+ + +L E +E G P+ ++++
Sbjct: 658 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 717
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
+++ + GR+++ I + D AY ++ K GR+VEA + E M+ NG
Sbjct: 718 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Query: 333 VEPD------LASYNTMIYL 346
V+PD L+ YN +L
Sbjct: 778 VKPDDLLQRALSEYNPPKWL 797
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 189/424 (44%), Gaps = 5/424 (1%)
Query: 15 YPFTHPAILNHENPITSFLTQRITHSKNVTFRIM--VKGRSLSTKFLNICIASMCKAKQL 72
Y H I N + + + ++ F ++ ++ RSL + C+ +
Sbjct: 103 YTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMV 162
Query: 73 DKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSL 132
DKA + + +LGV+ + ++++ D + +++ G+ P +S +
Sbjct: 163 DKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGF 222
Query: 133 MSGAVR-KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSA 191
+ A+ KG L ++E R + S N ++ + + A+R+ ++L
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLS-LVLDC 280
Query: 192 ETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEA 251
P+ T+ +ING CK G + A +F+ +++RG P+++ Y+ LI+G KA
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 252 RRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAA 311
+L S+ G + + + F++ ++ + G L + M +G + + Y ++
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 312 LVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGND 371
L + GR+ EA + Q++ G+EP + +Y+++I + + G + L + + K G D
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 372 QYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE 431
+ +++ GL K + A++ M N+V N ++DG + D ALK F
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 432 GMEV 435
M +
Sbjct: 521 LMGI 524
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 170/428 (39%), Gaps = 89/428 (20%)
Query: 114 LERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI--------------ESEIRP 159
L+ + A ++ S+ ++ +R G+F + +FD+MI + +
Sbjct: 87 LKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDA 146
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFK---------------------------------- 185
DV + LM C R GM D+A +F
Sbjct: 147 DVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHF 204
Query: 186 DVLLSAETDPS-TATYNVMINGLCKNGYVHNALSMFRNLQRRGF---------------- 228
D L +PS + + +++ L G V AL R + RGF
Sbjct: 205 DKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSV 264
Query: 229 ------------------VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
P V+T+ LING CK + A L + G EP+ I +
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 271 TTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS 330
+T+++ F+ G L G ++ ++ KG D + + + VK+G + A + ++M+
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 331 NGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
G+ P++ +Y +I + GR+ EA + QI K G T++ +I G CK L
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 391 AVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKF---FEGMEVR-DSFTYTILVH 446
+ M +G+ ++V ++DGL K G + A++F G +R + + L+
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 447 NLCRARRF 454
CR RF
Sbjct: 505 GWCRLNRF 512
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 145/350 (41%), Gaps = 27/350 (7%)
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM----------- 203
+EI S+ + H R GM D A++VF +++ + D +NV+
Sbjct: 93 AEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKD-----FNVLGSIRDRSLDAD 147
Query: 204 -----INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
+ C+ G V AL +F + G V + ++N L + R + +
Sbjct: 148 VCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKL 207
Query: 259 REAGHEPNAIT-FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGR 317
G EP+ ++ V++ F G + + L+ + +G+ G C V + +
Sbjct: 208 CRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRV-GIVSCNKVLKGLSVDQ 266
Query: 318 VVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI 377
+ A + ++ G P++ ++ T+I + ++G +D A +L +E+ G D ++
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 378 IIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR- 436
+I G KA L + G ++V + +D K+G + A ++ M +
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 437 ---DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGL 483
+ TYTIL+ LC+ R A L+ G + T ++IDG
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
Query: 19 HPAILNHENPITSFLT-QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAEC 77
P I+ + I + + +R+ ++ + + V +T L I I +CK +D A
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
+ + G P+ VT+ L+D + + V + ++ E M+E G++P ++SY+ ++ G
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL 188
++G ++F + I++++ PDV +Y IL+ Y ++G EA +++ +L
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 774
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 206/445 (46%), Gaps = 65/445 (14%)
Query: 53 SLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCE 112
S+ T N I+ +C+ D+A L + VK+G+LPD V++NTLID +C+ +F
Sbjct: 158 SIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKA 217
Query: 113 VLERMKE----------------------------AGLTPDVISYNSLMS-----GAVRK 139
+++ + E +G PDV++++S+++ G V +
Sbjct: 218 LVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLE 277
Query: 140 G------------------------------LFPMTLHMFDKMIESEIRPDVWSYNILMH 169
G ++ L ++ +M+ I D+ Y +LM
Sbjct: 278 GGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMD 337
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
F+ G EA + FK +LL P+ TY +++GLCK G + +A + + + +
Sbjct: 338 GLFKAGDLREAEKTFK-MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI 396
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P V+TY+++ING K EA LL + + PN T+ TV++ F+ G+ E +E+
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
EMR G + + +V L + GR+ E + + M+S GV D +Y ++I ++F+
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
G + AL +++++ G D ++ ++I G+ K ++ A M G ++
Sbjct: 517 GGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIAT 575
Query: 410 SNCVLDGLGKAGHIDRALKFFEGME 434
N +++ K G + LK ++ M+
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMK 600
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 158/301 (52%), Gaps = 5/301 (1%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G+ PD+ TFN ++++ + + ++ ++MK G+ P ++S N ++ G
Sbjct: 568 GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEA 627
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFK--DVLLSAETDPSTATYNVM 203
+H+ ++M+ EI P++ +Y I + + A+ +FK + LLS S YN +
Sbjct: 628 IHILNQMMLMEIHPNLTTYRIFLDTSSK---HKRADAIFKTHETLLSYGIKLSRQVYNTL 684
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
I LCK G A + +++ RGF+P+ +T+N+L++G +A S EAG
Sbjct: 685 IATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 744
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
PN T+ T++ G +++ + L+EM+S+G D F Y +++ K G + +
Sbjct: 745 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMT 804
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
I +M+++G+ P ++YN +I + G++ +A EL+ ++ K G + T+ +I GLC
Sbjct: 805 IYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Query: 384 K 384
K
Sbjct: 865 K 865
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 180/396 (45%), Gaps = 37/396 (9%)
Query: 91 VVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM-F 149
V F+TL Y L M G+ PD +NSL+ GL + + +
Sbjct: 58 VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
KMI + PDV++ N+L+H + ++G A + ++ ++S +T TYN +I+GLC+
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDT----VTYNTVISGLCE 173
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE--------- 260
+G A + + G +P+ ++YN LI+G CK A+ L+ E E
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTIL 233
Query: 261 -------------------AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
+G +P+ +TF++++N + G++ +G +L EM +
Sbjct: 234 LSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPN 293
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
Y T+V +L K A + QM+ G+ DL Y ++ F+ G + EA +
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Query: 362 QIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
+ ++ + T+T ++ GLCKA L+ A + M N+V + +++G K G
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKG 413
Query: 422 HIDRALKFFEGME----VRDSFTYTILVHNLCRARR 453
++ A+ ME V + FTY ++ L +A +
Sbjct: 414 MLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK 449
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 183/386 (47%), Gaps = 15/386 (3%)
Query: 73 DKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSL 132
D+ + + GV PDV N LI ++C+ +L + ++ D ++YN++
Sbjct: 111 DQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLL---RNRVISIDTVTYNTV 167
Query: 133 MSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAE 192
+SG GL +M++ I PD SYN L+ + ++G N V L+
Sbjct: 168 ISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG-----NFVRAKALVDEI 222
Query: 193 TDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEAR 252
++ + T+ ++++ +H +R++ GF P+V+T++++IN LCK + E
Sbjct: 223 SELNLITHTILLSSYYN---LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGG 279
Query: 253 RLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAAL 312
LL E E PN +T+TT+++ F+ L + ++M +G D Y ++ L
Sbjct: 280 LLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGL 339
Query: 313 VKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ 372
K G + EA++ + ++ + P++ +Y ++ + G + A ++ Q+ ++ +
Sbjct: 340 FKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNV 399
Query: 373 YTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEG 432
T++ +I+G K L EAV L M N V+DGL KAG + A++ +
Sbjct: 400 VTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKE 459
Query: 433 MEV----RDSFTYTILVHNLCRARRF 454
M + +++ LV++L R R
Sbjct: 460 MRLIGVEENNYILDALVNHLKRIGRI 485
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 185/431 (42%), Gaps = 43/431 (9%)
Query: 58 FLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM 117
L+ + + + ++ + + ++ D V GV D + + +LID + + +A E M
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM 530
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
+E G+ DV+SYN L+SG ++ G ++ D W+Y GM
Sbjct: 531 QERGMPWDVVSYNVLISGMLKFG---------------KVGAD-WAYK---------GMR 565
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
++ +P AT+N+M+N K G L ++ ++ G P +++ N
Sbjct: 566 EKG------------IEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNI 613
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
++ LC+ + EA +L++ PN T+ ++ + R + + + S G
Sbjct: 614 VVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYG 673
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
Y T++A L K G +A + M + G PD ++N++++ YF V +AL
Sbjct: 674 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKAL 733
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
+ + G + T+ II GL A + E + L M S G + N ++ G
Sbjct: 734 STYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQ 793
Query: 418 GKAGHIDRALKFF-----EGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVL 472
K G++ ++ + +G+ + S TY +L+ + L A + L + G
Sbjct: 794 AKIGNMKGSMTIYCEMIADGLVPKTS-TYNVLISEFANVGKMLQARELLKEMGKRGVSPN 852
Query: 473 KATRRAVIDGL 483
+T +I GL
Sbjct: 853 TSTYCTMISGL 863
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAG 110
G LS + N IA++CK KA V+ D G +PD VTFN+L+ Y
Sbjct: 673 GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKA 732
Query: 111 CEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHC 170
M EAG++P+V +YN+++ G GL +M +RPD ++YN L+
Sbjct: 733 LSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISG 792
Query: 171 YFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVP 230
++G + ++ +++ P T+TYNV+I+ G + A + + + +RG P
Sbjct: 793 QAKIGNMKGSMTIYCEMIADGLV-PKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSP 851
Query: 231 EVLTYNALINGLC------------KARRANEARRLLSEF-REAGHEP 265
TY +I+GLC KA EA+ LL E E G+ P
Sbjct: 852 NTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIP 899
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 1/255 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI + +C+ ++++A +L + + + P++ T+ +D + DA + E +
Sbjct: 612 NIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLS 671
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G+ YN+L++ + G+ + M PD ++N LMH YF +
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRK 731
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + V++ A P+ ATYN +I GL G + ++ RG P+ TYNALI
Sbjct: 732 ALSTY-SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALI 790
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+G K + + E G P T+ +++ G++ Q E+L EM +G +
Sbjct: 791 SGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVS 850
Query: 300 FDGFAYCTVVAALVK 314
+ YCT+++ L K
Sbjct: 851 PNTSTYCTMISGLCK 865
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 199/423 (47%), Gaps = 35/423 (8%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N+ I +CK K+++ AE + + + +LP ++T+NTLID YC+ + + +V ERMK
Sbjct: 218 NVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKA 277
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
+ P +I++N+L+ G + G+ ++ +M + PD ++++IL Y +
Sbjct: 278 DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEA 337
Query: 180 ANRVFK--------------DVLLSAETD--------------------PSTATYNVMIN 205
A V++ +LL+A P+ YN MI+
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMID 397
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
G C+ G + A ++++G P+ L YN LI C+ A + +++ + G P
Sbjct: 398 GYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSP 457
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
+ T+ ++ R ++ +IL EM G + +Y T++ L K +++EA +
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
M GV P + YN +I +G++++A ++ K+G + T+ +I GL
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 386 KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILV 445
+L+EA L ++ G ++ N ++ G G AG++ R + +E M+ R T+
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK-RSGIKPTLKT 636
Query: 446 HNL 448
++L
Sbjct: 637 YHL 639
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/509 (24%), Positives = 237/509 (46%), Gaps = 12/509 (2%)
Query: 5 AAPALHFNAAYPFTHPAILNHENP--ITSFL---TQRITHSKNVTFRIMVKGRSLSTKFL 59
A+P F +A+ + P+ L H+ + S L ++ I+ + ++ F + +G S+ L
Sbjct: 90 ASPKELF-SAFSLSSPS-LKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSL 147
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
+ + + K KQ V ++ ++ P + I A + G E+ RMK
Sbjct: 148 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 207
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
+ P V YN L+ G + +FD+M+ + P + +YN L+ Y + G P++
Sbjct: 208 DRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEK 267
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
+ +V ++ + + +PS T+N ++ GL K G V +A ++ + ++ GFVP+ T++ L
Sbjct: 268 SFKV-RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILF 326
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+G +A A + ++G + NA T + ++N + G++E+ EIL +KG
Sbjct: 327 DGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ Y T++ + G +V A E M G++PD +YN +I + G ++ A +
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
V++++ +G T+ I+I G + ++ L M G N+V+ +++ L K
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 420 AGHIDRALKFFEGMEVRDSFT----YTILVHNLCRARRFLCASKHLVACLQCGFQVLKAT 475
+ A ME R Y +L+ C + A + L+ G ++ T
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 476 RRAVIDGLISDGLKNEAKKVRLKIRKAQL 504
+IDGL G +EA+ + L+I + L
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 192/443 (43%), Gaps = 45/443 (10%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAY----------------- 101
N + + KA ++ AE VL + LG +PD TF+ L D Y
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV 346
Query: 102 ------------------CRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
C+ + E+L R GL P+ + YN+++ G RKG
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLV 406
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
+ M + ++PD +YN L+ + LG + A + + L PS TYN++
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG-VSPSVETYNIL 465
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
I G + + + ++ G +P V++Y LIN LCK + EA+ + + + G
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
P + +++ C G++E EM KG + Y T++ L TG++ EA++
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
+ ++ G++PD+ +YN++I Y G V + L +++++ G T+ ++I LC
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLC 644
Query: 384 KAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSF 439
+ + E + L + +L+ N VL G +++A + M + D
Sbjct: 645 TKEGI-ELTERL--FGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKT 701
Query: 440 TYTILVHNLCRARRFLCASKHLV 462
TY L+ + + LC + L+
Sbjct: 702 TYNSLILGQLKVGK-LCEVRSLI 723
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 174/366 (47%), Gaps = 7/366 (1%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
+I ++ + R M KG + N I C+ L A + K G+ PD + +N
Sbjct: 369 KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
LI +C + + + +MK G++P V +YN L+ G RK F + +M ++
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN 215
P+V SY L++C + EA V +D + P YN++I+G C G + +
Sbjct: 489 GTMPNVVSYGTLINCLCKGSKLLEAQIVKRD-MEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
A + + ++G ++TYN LI+GL + +EA LL E G +P+ T+ ++++
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 276 CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN-GVE 334
G +++ + + EM+ G Y +++ K G E+ E++ ++
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI-----ELTERLFGEMSLK 662
Query: 335 PDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQH 394
PDL YN +++ Y G +++A L Q+ ++ G D+ T+ +I G K +L E
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 395 LDHMNS 400
+D MN+
Sbjct: 723 IDEMNA 728
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 128/279 (45%), Gaps = 5/279 (1%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
+G S + N+ I C +++ A + +K G+ ++VT+NTLID
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
++L + GL PDV +YNSL+SG G + ++++M S I+P + +Y++L+
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
+ G+ + R+F ++ L P YN +++ +G + A ++ + + +
Sbjct: 643 LCTKEGI-ELTERLFGEMSLK----PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
+ TYN+LI G K + E R L+ E EP A T+ ++
Sbjct: 698 LDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVW 757
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
EM+ KG+ D +V+ L + R EA+ + +M
Sbjct: 758 YREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 38/247 (15%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
++ KG L+ N I + +L +AE +L++ + G+ PDV T+N+LI Y
Sbjct: 554 EMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAG 613
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
+ + E MK +G+ P + +Y+ L+S ++G+ +T +F +M ++PD+ YN
Sbjct: 614 NVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI-ELTERLFGEM---SLKPDLLVYN 669
Query: 166 ILMHCYFRLGMPDEANRVFK----------------------------------DVLLSA 191
++HCY G ++A + K D + +
Sbjct: 670 GVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729
Query: 192 ETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEA 251
E +P TYN+++ G C+ +A +R +Q +GF+ +V N L++GL + R+ EA
Sbjct: 730 EMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Query: 252 RRLLSEF 258
++SE
Sbjct: 790 EIVISEM 796
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 168/355 (47%)
Query: 68 KAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVI 127
K +++KA + + + G P V T+ LI + D + M GLTPDV+
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 128 SYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV 187
N+LM+ + G ++F +M P V SYN ++ F + D
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDK 399
Query: 188 LLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARR 247
+ + PS TY+++I+G CK V AL + + +GF P Y +LIN L KA+R
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 248 ANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCT 307
A L E +E ++ + ++ +CG+L + +++ EM+++G D +AY
Sbjct: 460 YEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 308 VVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
+++ +VK G + EA+ + +M NG D+ S+N ++ + R G A+E+ + I+ G
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG 579
Query: 368 PGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
D T+ ++ A EA + + M GF ++ + + +LD +G H
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDH 634
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 221/477 (46%), Gaps = 12/477 (2%)
Query: 15 YPFTHPAILNHENPITSFLTQRITHSKNVTFRIMVKGRSL--STKFLNICIASMCKAKQL 72
Y PA+L+ + L + SK ++ KGR ++ N I + + Q
Sbjct: 157 YVSVSPAVLSE---LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQH 213
Query: 73 DKAECVLIDGVKLG-VLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNS 131
+K V + G PD +T++ LI +Y + D+ + + MK+ + P Y +
Sbjct: 214 EKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTT 273
Query: 132 LMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSA 191
L+ + G L +F++M + P V++Y L+ + G DEA +KD+L
Sbjct: 274 LLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG 333
Query: 192 ETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKAR-RANE 250
T P N ++N L K G V ++F + P V++YN +I L +++ +E
Sbjct: 334 LT-PDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSE 392
Query: 251 ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVA 310
+ + P+ T++ +++ + R+E+ L +L EM KG+ AYC+++
Sbjct: 393 VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
AL K R A+E+ +++ N Y MI + + G++ EA++L ++++ +G G
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP 512
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
D Y + ++ G+ KA +NEA L M G ++ + N +L+G + G RA++ F
Sbjct: 513 DVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMF 572
Query: 431 EGME----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGL 483
E ++ D TY L+ A F A++ + GF+ T +++D +
Sbjct: 573 ETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 157/350 (44%), Gaps = 45/350 (12%)
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRG-FVPEVLTYNALINGLCKARRANEARR 253
P+++TYN +I L + G ++ + G P+ +TY+ALI+ K R + A R
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 254 LLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
L E ++ +P +TT++ F+ G++E+ L++ EM+ G + + Y ++ L
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 314 KTGRVVEADEIAEQMMSNGVEPDLA----------------------------------- 338
K GRV EA + M+ +G+ PD+
Sbjct: 315 KAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVV 374
Query: 339 SYNTMIYLYFR-QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
SYNT+I F + V E D+++ + ++T++I+I G CK R+ +A+ L+
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 398 MNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSF------TYTILVHNLCRA 451
M+ GF A +++ LGKA + A + F+ E++++F Y +++ + +
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFK--ELKENFGNVSSRVYAVMIKHFGKC 492
Query: 452 RRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRK 501
+ A G A++ G++ G+ NEA + K+ +
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEE 542
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 166/309 (53%), Gaps = 1/309 (0%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
+KLG+ PD+VT ++L++ +C S V +M++ G+ DV+ L+ + L
Sbjct: 5 MKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV 64
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
L + +M + I P+V +Y+ L+ + G +A R + + S + +P+ T++
Sbjct: 65 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHE-MDSKKINPNVITFSA 123
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+I+ K G + S+++ + + P V TY++LI GLC R +EA ++L G
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
PN +T++T+ N F+ R++ G+++L +M +G + + T++ + G++ A
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+ M SNG+ P++ SYN ++ F G V++AL + ++K D T+TI+IHG+
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGM 303
Query: 383 CKAKRLNEA 391
CKA + EA
Sbjct: 304 CKACMVKEA 312
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 158/308 (51%), Gaps = 1/308 (0%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
K+G+ DVV LID C+ EVL+RMK+ G++P+V++Y+SL++G + G
Sbjct: 41 KMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLA 100
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
+M +I P+V +++ L+ Y + G + + V+K +++ DP+ TY+ +
Sbjct: 101 DAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYK-MMIQMSIDPNVFTYSSL 159
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
I GLC + V A+ M + +G P V+TY+ L NG K+ R ++ +LL + + G
Sbjct: 160 IYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGV 219
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
N ++ T++ F+ G+++ L + M S G + +Y V+A L G V +A
Sbjct: 220 AANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALS 279
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
E M + D+ +Y MI+ + V EA +L +++ + D +TI+I L
Sbjct: 280 RFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELN 339
Query: 384 KAKRLNEA 391
+A EA
Sbjct: 340 RAGMRTEA 347
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 143/297 (48%), Gaps = 39/297 (13%)
Query: 194 DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARR 253
+P T + ++NG C + + +A+ + +++ G +V+ LI+ LCK R A
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 254 LLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
+L ++ G PN +T+++++ + GRL L EM SK + + ++ A
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 314 KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQY 373
K G++ + D + + M+ ++P++ +Y+++IY RVDEA++++D + +G +
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 374 THTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHID--------- 424
T++ + +G K+ R+++ ++ LD M G N V+ N ++ G +AG ID
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249
Query: 425 --------------------------RALKFFEGMEVR----DSFTYTILVHNLCRA 451
+AL FE M+ D TYTI++H +C+A
Sbjct: 250 TSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKA 306
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 1/296 (0%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
I I ++CK + + A VL G+ P+VVT+++LI C+ L M
Sbjct: 53 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 112
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
+ P+VI++++L+ ++G ++ MI+ I P+V++Y+ L++ DEA
Sbjct: 113 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEA 172
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
++ D+++S P+ TY+ + NG K+ V + + + ++ +RG ++ N LI
Sbjct: 173 IKML-DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
G +A + + A + G PN ++ V+ F G +E+ L M+
Sbjct: 232 GYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDL 291
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA 356
D Y ++ + K V EA ++ ++ VEPD +Y MI R G EA
Sbjct: 292 DIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 125/262 (47%), Gaps = 1/262 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I +CK+ +L AE L + + P+V+TF+ LIDAY + V + M + +
Sbjct: 90 ITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSI 149
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P+V +Y+SL+ G + M D MI P+V +Y+ L + +F+ D+ +
Sbjct: 150 DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIK 209
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+ D + +T + N +I G + G + AL +F + G +P + +YN ++ GL
Sbjct: 210 LLDD-MPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 268
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
+A ++ ++ + IT+T +++ + +++ ++ +++ K D
Sbjct: 269 FANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDF 328
Query: 303 FAYCTVVAALVKTGRVVEADEI 324
AY ++A L + G EAD +
Sbjct: 329 KAYTIMIAELNRAGMRTEADAL 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 9/209 (4%)
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
+ +M G D ++V + + +A +A QM G++ D+ +I +
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
V ALE++ +++ G + T++ +I GLCK+ RL +A + L M+S N++
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 410 SNCVLDGLGKAG---HIDRALKFFEGMEVR-DSFTYTILVHNLCRARRFLCASKHLVACL 465
+ ++D K G +D K M + + FTY+ L++ LC R A K L +
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 466 QCGFQVLKATRRAVIDGL-----ISDGLK 489
G T + +G + DG+K
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIK 209
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 199/427 (46%), Gaps = 12/427 (2%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
KL + T+N L + C+ D ++ E MK G++P+ L+S KG
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKG--- 152
Query: 144 MTLHMFDKMI--ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYN 201
LH ++ E+ N L++ +L ++A ++F D L ++ T T+N
Sbjct: 153 -KLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLF-DEHLRFQSCNDTKTFN 210
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
++I GLC G AL + + G P+++TYN LI G CK+ N+A + + +
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG 270
Query: 262 GH-EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVE 320
P+ +T+T++++ + G++ + +L +M G + +V K G ++
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIH 380
A+EI +M+S G PD+ ++ ++I Y R G+V + L +++ G + +T++I+I+
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 381 GLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR---- 436
LC RL +A + L + S N V+DG KAG ++ A E ME +
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450
Query: 437 DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVR 496
D T+TIL+ C R A + G K T +++ L+ G+ EA +
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLN 510
Query: 497 LKIRKAQ 503
RK Q
Sbjct: 511 QIARKGQ 517
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 182/376 (48%), Gaps = 2/376 (0%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAG 110
G S + + L ++S + +L A +L+ ++ VV N+L++ + +
Sbjct: 133 GVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVV--NSLLNTLVKLDRVEDA 190
Query: 111 CEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHC 170
++ + D ++N L+ G G L + M PD+ +YN L+
Sbjct: 191 MKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQG 250
Query: 171 YFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVP 230
+ + ++A+ +FKDV + P TY MI+G CK G + A S+ ++ R G P
Sbjct: 251 FCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYP 310
Query: 231 EVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEIL 290
+T+N L++G KA A + + G P+ +TFT++++ R G++ QG +
Sbjct: 311 TNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW 370
Query: 291 TEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQ 350
EM ++G + F Y ++ AL R+++A E+ Q+ S + P YN +I + +
Sbjct: 371 EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKA 430
Query: 351 GRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVAS 410
G+V+EA +V+++EK+ D+ T TI+I G C R+ EAV M ++G + +
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITV 490
Query: 411 NCVLDGLGKAGHIDRA 426
+ +L L KAG A
Sbjct: 491 SSLLSCLLKAGMAKEA 506
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 169/351 (48%), Gaps = 3/351 (0%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
+N + ++ K +++ A + + ++ D TFN LI C + E+L M
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEI-RPDVWSYNILMHCYFRLGMP 177
G PD+++YN+L+ G + MF + + PDV +Y ++ Y + G
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
EA+ + D +L P+ T+NV+++G K G + A + + G P+V+T+ +
Sbjct: 294 REASSLLDD-MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LI+G C+ + ++ RL E G PNA T++ ++N RL + E+L ++ SK
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
F Y V+ K G+V EA+ I E+M +PD ++ +I + +GR+ EA+
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLV 408
+ ++ G D+ T + ++ L KA EA HL+ + G N+V
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY-HLNQIARKGQSNNVV 522
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 199/427 (46%), Gaps = 12/427 (2%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
KL + T+N L + C+ D ++ E MK G++P+ L+S KG
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKG--- 152
Query: 144 MTLHMFDKMI--ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYN 201
LH ++ E+ N L++ +L ++A ++F D L ++ T T+N
Sbjct: 153 -KLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLF-DEHLRFQSCNDTKTFN 210
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
++I GLC G AL + + G P+++TYN LI G CK+ N+A + + +
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG 270
Query: 262 GH-EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVE 320
P+ +T+T++++ + G++ + +L +M G + +V K G ++
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIH 380
A+EI +M+S G PD+ ++ ++I Y R G+V + L +++ G + +T++I+I+
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 381 GLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR---- 436
LC RL +A + L + S N V+DG KAG ++ A E ME +
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450
Query: 437 DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVR 496
D T+TIL+ C R A + G K T +++ L+ G+ EA +
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLN 510
Query: 497 LKIRKAQ 503
RK Q
Sbjct: 511 QIARKGQ 517
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 182/376 (48%), Gaps = 2/376 (0%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAG 110
G S + + L ++S + +L A +L+ ++ VV N+L++ + +
Sbjct: 133 GVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVV--NSLLNTLVKLDRVEDA 190
Query: 111 CEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHC 170
++ + D ++N L+ G G L + M PD+ +YN L+
Sbjct: 191 MKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQG 250
Query: 171 YFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVP 230
+ + ++A+ +FKDV + P TY MI+G CK G + A S+ ++ R G P
Sbjct: 251 FCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYP 310
Query: 231 EVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEIL 290
+T+N L++G KA A + + G P+ +TFT++++ R G++ QG +
Sbjct: 311 TNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW 370
Query: 291 TEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQ 350
EM ++G + F Y ++ AL R+++A E+ Q+ S + P YN +I + +
Sbjct: 371 EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKA 430
Query: 351 GRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVAS 410
G+V+EA +V+++EK+ D+ T TI+I G C R+ EAV M ++G + +
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITV 490
Query: 411 NCVLDGLGKAGHIDRA 426
+ +L L KAG A
Sbjct: 491 SSLLSCLLKAGMAKEA 506
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 169/351 (48%), Gaps = 3/351 (0%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
+N + ++ K +++ A + + ++ D TFN LI C + E+L M
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEI-RPDVWSYNILMHCYFRLGMP 177
G PD+++YN+L+ G + MF + + PDV +Y ++ Y + G
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
EA+ + D +L P+ T+NV+++G K G + A + + G P+V+T+ +
Sbjct: 294 REASSLLDD-MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LI+G C+ + ++ RL E G PNA T++ ++N RL + E+L ++ SK
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
F Y V+ K G+V EA+ I E+M +PD ++ +I + +GR+ EA+
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLV 408
+ ++ G D+ T + ++ L KA EA HL+ + G N+V
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY-HLNQIARKGQSNNVV 522
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 186/398 (46%), Gaps = 5/398 (1%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG T+ N + + + +++ A D ++ + +V TFN +I+ C+
Sbjct: 184 KGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKK 243
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
L M+ G+ P +++YN+L+ G +G + +M +PD+ +YN ++
Sbjct: 244 AKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILS 303
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
G E R K++ L P + +YN++I G NG + A + + ++G V
Sbjct: 304 WMCNEGRASEVLREMKEIGLV----PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV 359
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P TYN LI+GL + A L+ E RE G +++T+ ++N + G ++ +
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
EM + G F Y +++ L + + EADE+ E+++ G++PDL NT++ +
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
G +D A L+ +++ D T+ ++ GLC + EA + + M G + ++
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 410 SNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHN 447
N ++ G K G A + M + F T+L +N
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEM-LSLGFNPTLLTYN 576
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 188/409 (45%), Gaps = 8/409 (1%)
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
+ F+ L+ C+ D E MKE G P + N +++ R +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
M EI+ +V+++NI+++ + G +A + F ++ P+ TYN ++ G G
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKA-KGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
+ A + ++ +GF P++ TYN +++ +C RA+E +L E +E G P+++++
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYN 331
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
++ C G LE EM +G + Y T++ L ++ A+ + ++
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
G+ D +YN +I Y + G +A L D++ +G Q+T+T +I+ LC+ + EA
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHN 447
+ + + G +LV N ++DG G++DRA + M++ D TY L+
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511
Query: 448 LCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVR 496
LC +F A + + + G + + +I G G A VR
Sbjct: 512 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVR 560
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 164/377 (43%), Gaps = 33/377 (8%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAY--------CRFVSFDA- 109
NI I +CK +L KA+ L G+ P +VT+NTL+ + R + +
Sbjct: 228 FNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMK 287
Query: 110 -----------------------GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTL 146
EVL MKE GL PD +SYN L+ G G M
Sbjct: 288 SKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 147 HMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMING 206
D+M++ + P ++YN L+H F + A + +++ S TYN++ING
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS-VTYNILING 406
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
C++G A ++ + G P TY +LI LC+ + EA L + G +P+
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
+ T+M+ G +++ +L EM D Y ++ L G+ EA E+
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
+M G++PD SYNT+I Y ++G A + D++ G T+ ++ GL K +
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 387 RLNEAVQHLDHMNSLGF 403
A + L M S G
Sbjct: 587 EGELAEELLREMKSEGI 603
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 137/285 (48%), Gaps = 1/285 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI I L+ A + VK G++P T+NTLI +A ++ ++E
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G+ D ++YN L++G + G + D+M+ I+P ++Y L++ R E
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A+ +F+ V+ P N +++G C G + A S+ + + P+ +TYN L+
Sbjct: 451 ADELFEKVV-GKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
GLC + EAR L+ E + G +P+ I++ T+++ + G + + EM S G+
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
Y ++ L K A+E+ +M S G+ P+ +S+ ++I
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I + +++ AE ++ + + G++ D VT+N LI+ YC+ + + M
Sbjct: 366 NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMT 425
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G+ P +Y SL+ RK +F+K++ ++PD+ N LM + +G D
Sbjct: 426 DGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDR 485
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + K++ + + +P TYN ++ GLC G A + ++RRG P+ ++YN LI
Sbjct: 486 AFSLLKEMDMMS-INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+G K A + E G P +T+ ++ + E E+L EM+S+G
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604
Query: 300 FDGFAYCTVVAAL 312
+ ++C+V+ A+
Sbjct: 605 PNDSSFCSVIEAM 617
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 1/243 (0%)
Query: 32 FLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDV 91
F+ +I ++ + I KG L + NI I C+ KA + + + G+ P
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
T+ +LI CR E+ E++ G+ PD++ N+LM G G + +
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
M I PD +YN LM G +EA + ++ P +YN +I+G K G
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG-IKPDHISYNTLISGYSKKG 551
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
+A + + GF P +LTYNAL+ GL K + A LL E + G PN +F
Sbjct: 552 DTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFC 611
Query: 272 TVM 274
+V+
Sbjct: 612 SVI 614
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 7/259 (2%)
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
ST +++++ C+ V A+ F ++ +GF P+ T N ++ L + R A
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 256 SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT 315
++ + N TF ++N + G+L++ L M G Y T+V
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 316 GRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTH 375
GR+ A I +M S G +PD+ +YN ++ +GR E L + +I G D ++
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GLVPDSVSY 330
Query: 376 TIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME- 434
I+I G L A + D M G N ++ GL I+ A +
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 435 ---VRDSFTYTILVHNLCR 450
V DS TY IL++ C+
Sbjct: 391 KGIVLDSVTYNILINGYCQ 409
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 172/344 (50%), Gaps = 2/344 (0%)
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
N + +C+ DA L+ M++ G+ P+V+ YN++M R + +F +M+E
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVH 214
+ P+ ++Y+IL+ +F+ A V + ++ + + YN +INGLCK G
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ-MNASNFEANEVIYNTIINGLCKVGQTS 571
Query: 215 NALSMFRNL-QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
A M +NL + + + +YN++I+G K + A E E G PN +TFT++
Sbjct: 572 KAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSL 631
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
+N + R++ LE+ EM+S D AY ++ K + A + ++ G+
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL 691
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
P+++ YN++I + G++D A++L ++ +G D +T+T +I GL K +N A
Sbjct: 692 MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASD 751
Query: 394 HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD 437
+ LG + + +++GL K G +A K E M+ +D
Sbjct: 752 LYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 186/391 (47%), Gaps = 2/391 (0%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG + F N + + C+ K +D A + + ++ G+ P+ T++ LID + +
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQN 537
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI-ESEIRPDVWSYNILM 168
+V+ +M + + + YN++++G + G M +I E SYN ++
Sbjct: 538 AWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSII 597
Query: 169 HCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF 228
+ ++G D A ++++ + ++ P+ T+ +ING CK+ + AL M ++
Sbjct: 598 DGFVKVGDTDSAVETYREMSENGKS-PNVVTFTSLINGFCKSNRMDLALEMTHEMKSMEL 656
Query: 229 VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLE 288
++ Y ALI+G CK A L SE E G PN + ++++ G+++ ++
Sbjct: 657 KLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAID 716
Query: 289 ILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYF 348
+ +M + G + D F Y T++ L+K G + A ++ +++ G+ PD + ++
Sbjct: 717 LYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLS 776
Query: 349 RQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLV 408
++G+ +A +++++++K+ + ++ +I G + LNEA + D M G +
Sbjct: 777 KKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDT 836
Query: 409 ASNCVLDGLGKAGHIDRALKFFEGMEVRDSF 439
N ++ G + + E+R S+
Sbjct: 837 VFNLLVSGRVEKPPAASKISSLASPEMRSSY 867
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 174/391 (44%), Gaps = 4/391 (1%)
Query: 45 FRIMVKGRSLS-TKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
F +MV + + ++N ++S+ ++ +D+A+ + V +GV D VT L+ A R
Sbjct: 192 FGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLR 251
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRP-DVW 162
+ ++ R+ G PD + ++ + A + M L + +M P
Sbjct: 252 ERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQE 311
Query: 163 SYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRN 222
+Y ++ + + G +EA RV D ++ S ++NG CK + AL +F
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVM-DEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNR 370
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
++ G P+ + ++ ++ CK +A + P+++ T++ C +
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES 430
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
E LEI + + + GF + K G+V A + M G+EP++ YN
Sbjct: 431 PEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNN 489
Query: 343 MIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
M+ + R +D A + ++ ++G + +T++I+I G K K A ++ MN+
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASN 549
Query: 403 FGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
F N V N +++GL K G +A + + +
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 121/253 (47%), Gaps = 1/253 (0%)
Query: 200 YNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR 259
+N ++N +N + A+ F + R VP V N +++ L ++ +EA+ + ++
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 260 EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVV 319
G + +T +M R + E+ ++I + S+G DG + V A KT +V
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291
Query: 320 EADEIAEQMMSN-GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
A ++ +M GV +Y ++I + ++G ++EA+ ++D++ G T +
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS 438
++G CK L +A+ + M G + V + +++ K +++A++F+ M+
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 439 FTYTILVHNLCRA 451
++LVH + +
Sbjct: 412 APSSVLVHTMIQG 424
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 174/373 (46%), Gaps = 36/373 (9%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
I I +C+ ++++AE + K GVLP++ T++ +ID YC+ + + + + A
Sbjct: 239 IYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVA 298
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
L P+V+ + +L+ G + +F M++ + P+++ YN L+H + + G EA
Sbjct: 299 ELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEA 358
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
+ + + S P TY ++INGLC V A +F+ ++ P TYN+LI+
Sbjct: 359 VGLLSE-MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
G CK +A L SE +G EPN ITF+T++
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI-------------------------- 451
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
DG YC V G E M G+ PD+ +Y +I +F++ + EAL L
Sbjct: 452 DG--YCNVRDIKAAMGLYFE-------MTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
+ + G + +T ++ G K RL+ A+ N +N V C+++GL +
Sbjct: 503 SDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQN 562
Query: 421 GHIDRALKFFEGM 433
G+I RA +FF M
Sbjct: 563 GYILRASRFFSDM 575
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 168/345 (48%), Gaps = 1/345 (0%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
PD ++++ R FD+ + M GL PDV Y L ++GL+ +
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
D+M I+P+V+ Y I + R +EA ++F +++ P+ TY+ MI+G C
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMF-ELMKKHGVLPNLYTYSAMIDGYC 280
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
K G V A +++ + +P V+ + L++G CKAR AR L + G +PN
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLY 340
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
+ +++ + G + + + +L+EM S + D F Y ++ L +V EA+ + ++M
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
+ + P A+YN++I+ Y ++ +++AL+L ++ G + T + +I G C + +
Sbjct: 401 KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
A+ M G ++V ++D K ++ AL+ + M
Sbjct: 461 KAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDM 505
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ CKA++L A + + VK GV P++ +N LI +C+ + +L M+ L
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
+PDV +Y L++G + +F KM I P +YN L+H Y + ++A
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+ ++ S +P+ T++ +I+G C + A+ ++ + +G VP+V+TY ALI+
Sbjct: 431 LCSEMTASG-VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
K EA RL S+ EAG PN TF +++ ++ GRL ++ E + ++
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNH 549
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
+ ++ L + G ++ A M S G+ PD+ SY +M+ + ++ R+ + + L
Sbjct: 550 VGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCD 609
Query: 363 IEKEG 367
+ K G
Sbjct: 610 MIKTG 614
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 169/380 (44%), Gaps = 5/380 (1%)
Query: 112 EVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCY 171
E L +E +PD + S+++G VR+ F + MI + PDV Y +L C
Sbjct: 150 EALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCC 209
Query: 172 FRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
F+ G+ + ++ D + S P+ Y + I LC++ + A MF +++ G +P
Sbjct: 210 FKQGLYSKKEKLL-DEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPN 268
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILT 291
+ TY+A+I+G CK +A L E A PN + F T+++ + L +
Sbjct: 269 LYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFV 328
Query: 292 EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG 351
M G + + Y ++ K+G ++EA + +M S + PD+ +Y +I +
Sbjct: 329 HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 388
Query: 352 RVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASN 411
+V EA L +++ E T+ +IHG CK + +A+ M + G N++ +
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 412 CVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQC 467
++DG I A+ + M ++ D TYT L+ + A + L+
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 468 GFQVLKATRRAVIDGLISDG 487
G T ++DG +G
Sbjct: 509 GIHPNDHTFACLVDGFWKEG 528
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 115/256 (44%), Gaps = 12/256 (4%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMVKGRSL-STKFLNICIASMCKAKQLDKAECV 78
P + + I + N F+ M R S+ N I CK +++A +
Sbjct: 372 PDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL 431
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
+ GV P+++TF+TLID YC A + M G+ PDV++Y +L+ +
Sbjct: 432 CSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK 491
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
+ L ++ M+E+ I P+ ++ L+ +++ G R+ + E + +
Sbjct: 492 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEG------RLSVAIDFYQENNQQRS 545
Query: 199 TYN-----VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARR 253
+N +I GLC+NGY+ A F +++ G P++ +Y +++ G + +R +
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMM 605
Query: 254 LLSEFREAGHEPNAIT 269
L + + G PN +
Sbjct: 606 LQCDMIKTGILPNLLV 621
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 165/335 (49%), Gaps = 1/335 (0%)
Query: 56 TKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLE 115
T+ N + K L AE ++ + K GV PD T++ LIDAY +++ VL+
Sbjct: 339 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK 398
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
M+ + P+ ++ L++G +G + T + +M ++PD YN+++ + +
Sbjct: 399 EMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN 458
Query: 176 MPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTY 235
D A F D +LS +P T+N +I+ CK+G A MF ++RRG +P TY
Sbjct: 459 CLDHAMTTF-DRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 517
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
N +IN R ++ +RLL + + G PN +T TT+++ + GR +E L EM+S
Sbjct: 518 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 577
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDE 355
G Y ++ A + G +A M S+G++P L + N++I + R E
Sbjct: 578 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE 637
Query: 356 ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
A ++ +++ G D T+T ++ L + + +
Sbjct: 638 AFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK 672
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 175/405 (43%), Gaps = 5/405 (1%)
Query: 54 LSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEV 113
L + +N I K+ KA +L G+ T ++I A +
Sbjct: 267 LDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEAL 326
Query: 114 LERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFR 173
E ++++G+ P +YN+L+ G V+ G M +M + + PD +Y++L+ Y
Sbjct: 327 FEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVN 386
Query: 174 LGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
G + A V K+ + + + P++ ++ ++ G G + + ++ G P+
Sbjct: 387 AGRWESARIVLKE-MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 234 TYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
YN +I+ K + A G EP+ +T+ T+++C + GR E+ M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
+G Y ++ + R + + +M S G+ P++ ++ T++ +Y + GR
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
++A+E +++++ G + +I+ + +AV M S G +L+A N +
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSL 625
Query: 414 LDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRF 454
++ G+ A + M+ D TYT L+ L R +F
Sbjct: 626 INAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKF 670
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 130/273 (47%), Gaps = 5/273 (1%)
Query: 44 TFRIMVKGRSLSTK----FLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLID 99
TF+++ + +S+ K F N+ I + K LD A + G+ PD VT+NTLID
Sbjct: 428 TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 487
Query: 100 AYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRP 159
+C+ E+ E M+ G P +YN +++ + + + KM I P
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 547
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
+V ++ L+ Y + G ++A ++ + S PS+ YN +IN + G A++
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEE-MKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 606
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
FR + G P +L N+LIN + RR EA +L +E G +P+ +T+TT+M R
Sbjct: 607 FRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAAL 312
+ ++ + EM G D A + +AL
Sbjct: 667 VDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 179/410 (43%), Gaps = 13/410 (3%)
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP--MTLHMF 149
+T+N LI A R + ++ +M++ G D ++Y+ ++ R M L ++
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVF---KDVLLSAETDPSTATYNVMING 206
++ ++ DV N ++ + + G P +A ++ + LSA+T AT +I+
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKT----ATLVSIISA 313
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
L +G A ++F L++ G P YNAL+ G K +A ++SE + G P+
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
T++ +++ GR E +L EM + + F + ++A G + ++ +
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK 433
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
+M S GV+PD YN +I + + +D A+ D++ EG D+ T +I CK
Sbjct: 434 EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Query: 387 RLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYT 442
R A + + M G N +++ G D + M+ + + T+T
Sbjct: 494 RHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 553
Query: 443 ILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
LV ++ RF A + L G + A+I+ GL +A
Sbjct: 554 TLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQA 603
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 177/409 (43%), Gaps = 14/409 (3%)
Query: 39 HSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLI 98
S V + ++++ + S K ++ + + K + DK E DV N +I
Sbjct: 229 QSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLEL------------DVQLVNDII 276
Query: 99 DAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIR 158
+ + ++L + GL+ + S++S G +F+++ +S I+
Sbjct: 277 MGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIK 336
Query: 159 PDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALS 218
P +YN L+ Y + G +A + + + P TY+++I+ G +A
Sbjct: 337 PRTRAYNALLKGYVKTGPLKDAESMVSE-MEKRGVSPDEHTYSLLIDAYVNAGRWESARI 395
Query: 219 MFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCF 278
+ + ++ P ++ L+ G + ++L E + G +P+ + V++
Sbjct: 396 VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 455
Query: 279 RCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLA 338
+ L+ + M S+G D + T++ K GR + A+E+ E M G P
Sbjct: 456 KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCAT 515
Query: 339 SYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM 398
+YN MI Y Q R D+ L+ +++ +G + THT ++ K+ R N+A++ L+ M
Sbjct: 516 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Query: 399 NSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHN 447
S+G + N +++ + G ++A+ F M D ++L N
Sbjct: 576 KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM-TSDGLKPSLLALN 623
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 152/352 (43%), Gaps = 54/352 (15%)
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
Y+IL+H R + ++++ LLS + + TYN +I +N + AL++ +
Sbjct: 170 YSILIHALGR------SEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKM 223
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEAR--RLLSEFREAGHEPNAITFTTVMNCCFRCG 281
++ G+ + + Y+ +I L ++ + + RL E E + ++ + G
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 282 RLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYN 341
+ L++L ++ G + ++++AL +GR +EA+ + E++ +G++P +YN
Sbjct: 284 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 343
Query: 342 TMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA---------- 391
++ Y + G + +A +V ++EK G D++T++++I A R A
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
Query: 392 -------------------------VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRA 426
Q L M S+G + N V+D GK +D A
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Query: 427 LKFF-----EGMEVRDSFTYTILVHNLCRARRFLCASKHLVA-----CLQCG 468
+ F EG+E D T+ L+ C+ R + A + A CL C
Sbjct: 464 MTTFDRMLSEGIEP-DRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 514
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 179/366 (48%), Gaps = 14/366 (3%)
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
+L +F KM + + P +Y ++ + A + +K+ + P+ A+ NV+I
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKN-MREIGLPPTVASLNVLI 163
Query: 205 NGLCKN-GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
LC+N G V L +F + +RG P+ TY LI+GLC+ R +EA++L +E E
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
P +T+T+++N +++ + L EM+SKG + F Y +++ L K GR ++A E
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
+ E MM+ G P++ +Y T+I ++ ++ EA+EL+D++ +G D + +I G C
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 384 KAKRLNEAVQHLDHM-------NSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR 436
+ EA LD M N L + ++ SN V+ GL A + RA + M R
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSR 402
Query: 437 ----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
+ T LV LC+ F A + + + G K T + +I + + EA
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEA 462
Query: 493 KKVRLK 498
L+
Sbjct: 463 SDTLLR 468
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 138/305 (45%), Gaps = 8/305 (2%)
Query: 59 LNICIASMCKAK-QLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM 117
LN+ I ++C+ +D + ++ K G PD T+ TLI CRF D ++ M
Sbjct: 159 LNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM 218
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
E P V++Y SL++G + ++M I P+V++Y+ LM + G
Sbjct: 219 VEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRS 278
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
+A +F +++++ P+ TY +I GLCK + A+ + + +G P+ Y
Sbjct: 279 LQAMELF-EMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR------LEQGLEILT 291
+I+G C + EA L E G PN +T+ + R + +
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYL 397
Query: 292 EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG 351
MRS+G + + ++V L K G +A ++ ++++++G P ++ +I +
Sbjct: 398 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKT 457
Query: 352 RVDEA 356
V EA
Sbjct: 458 IVGEA 462
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 116/242 (47%), Gaps = 9/242 (3%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
RI +K + ++ K + + I +C +K +D+A L + G+ P+V T++
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
+L+D C+ E+ E M G P++++Y +L++G ++ + + D+M
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV-------MINGLC 208
++PD Y ++ + + EA +++L T P+ T+N+ ++ GLC
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGIT-PNRLTWNIHVKTSNEVVRGLC 385
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
N Y A +++ +++ RG EV T +L+ LCK +A +L+ E G P+
Sbjct: 386 AN-YPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKG 444
Query: 269 TF 270
T+
Sbjct: 445 TW 446
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 193/405 (47%), Gaps = 4/405 (0%)
Query: 91 VVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRK-GLFP-MTLHM 148
V +N ++ Y R F E+++ M++ G PD+IS+N+L++ ++ GL P + + +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
D + S +RPD +YN L+ R D A +VF+D + + P TYN MI+
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFED-MEAHRCQPDLWTYNAMISVYG 343
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
+ G A +F L+ +GF P+ +TYN+L+ + R + + + + ++ G + +
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRS-KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
T+ T+++ + G+L+ L++ +M+ G D Y ++ +L K R VEA + +
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M+ G++P L +Y+ +I Y + G+ +EA + + + G D +++++ L +
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHN 447
+A M S G + ++ GL K D K ME +
Sbjct: 524 TRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSV 583
Query: 448 LCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
L + F A++ L + G+++ T +++ S G +EA
Sbjct: 584 LVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEA 628
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 188/417 (45%), Gaps = 54/417 (12%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKL-GVLPDVVTFNTLIDAYCRF--VSFDAGCEVLER 116
N + ++ + KA+ L+D ++ G +PD+++FNTLI+A + ++ + E+L+
Sbjct: 229 NAMMGVYSRSGKFSKAQ-ELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
++ +GL PD I+YN+L+S R + +F+ M +PD+W+YN ++ Y R G+
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV------- 229
EA R+F ++ L P TYN ++ + +++ +Q+ GF
Sbjct: 348 AAEAERLFMELELKGFF-PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 230 -----------------------------PEVLTYNALINGLCKARRANEARRLLSEFRE 260
P+ +TY LI+ L KA R EA L+SE +
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVE 320
G +P T++ ++ + G+ E+ + + M G D AY ++ L++ +
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRK 526
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIH 380
A + M+S+G P Y MI ++ R D+ + + +E+ N ++++
Sbjct: 527 AWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVK 586
Query: 381 GLC---KAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
G C A++L A+ + G+ L ++ +L LG R + FE +E
Sbjct: 587 GECFDLAARQLKVAITN---------GYEL-ENDTLLSILGSYSSSGRHSEAFELLE 633
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 137/269 (50%), Gaps = 7/269 (2%)
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGL--EI 289
V YNA++ ++ + ++A+ L+ R+ G P+ I+F T++N + G L L E+
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
L +R+ G D Y T+++A + + A ++ E M ++ +PDL +YN MI +Y R
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
G EA L ++E +G D T+ +++ + + + + M +GFG + +
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 410 SNCVLDGLGKAGHIDRALKFFEGMEV-----RDSFTYTILVHNLCRARRFLCASKHLVAC 464
N ++ GK G +D AL+ ++ M+ D+ TYT+L+ +L +A R + A+ +
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 465 LQCGFQVLKATRRAVIDGLISDGLKNEAK 493
L G + T A+I G G + EA+
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEAE 493
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 158/383 (41%), Gaps = 67/383 (17%)
Query: 79 LIDGVK-LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
L+D V+ G+ PD +T+NTL+ A R + D +V E M+ PD+ +YN+++S
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 138 R----------------KGLFPMTL-------------------HMFDKMIESEIRPDVW 162
R KG FP + ++ +M + D
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 163 SYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRN 222
+YN ++H Y + G D A +++KD+ + +P TY V+I+ L K A ++
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
+ G P + TY+ALI G KA + EA S +G +P+ + ++ +++ R
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM-------------- 328
+ + +M S G+T Y ++ L+K R + + M
Sbjct: 524 TRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSV 583
Query: 329 -----------------MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGND 371
++NG E + + +++ Y GR EA EL++ +++ G+
Sbjct: 584 LVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSK 643
Query: 372 QYTHTIIIHGLCKAKRLNEAVQH 394
+ +I CK L+ A+
Sbjct: 644 RLITEALIVLHCKVNNLSAALDE 666
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 159/376 (42%), Gaps = 36/376 (9%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I + K K KAE V+ + + G PD+ T+N+L+ AY + ++ + M G
Sbjct: 759 IEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGP 818
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
+P V S N L+ G + +++ + + S +++ + R G E +
Sbjct: 819 SPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKK 878
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA-------------------------- 216
++ + +A P+ Y +MI LCK V +A
Sbjct: 879 IYSS-MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 217 ---------LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
+ +++ ++ G P+ TYN LI C+ RR E L+ + R G +P
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKL 997
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
T+ ++++ + LEQ ++ E+ SKG D Y T++ +G +A+++ +
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M + G+EP LA+ + ++ Y G EA +++ ++ ++ +I ++K
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 388 LNEAVQHLDHMNSLGF 403
N ++ L M G
Sbjct: 1118 YNSGIERLLEMKKEGL 1133
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 160/347 (46%), Gaps = 9/347 (2%)
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
Y ++ Y + + +A V ++ S T P T+N +++ + G A ++F +
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRT-PDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
R G P V + N L++ LC R E ++ E ++ G + + + +++ R G +
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
+ +I + M++ GY Y ++ L K RV +A+ + +M + +LA +N+M
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSM 933
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
+ +Y + +++ +I++ G D+ T+ +I C+ +R E + M +LG
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFE-----GMEVRDSFTYTILVHNLCRARRFLCAS 458
L ++ GK +++A + FE G+++ SF +T++ + R +
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMM--KISRDSGSDSKA 1051
Query: 459 KHLVACLQ-CGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQL 504
+ L+ ++ G + AT ++ S G EA+KV ++ ++
Sbjct: 1052 EKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEV 1098
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 138/326 (42%), Gaps = 21/326 (6%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + + + + +K + V K+G D +T+NT+I Y + D ++ + MK
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 120 -AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
+G PD I+Y L+ + + +M++ I+P + +Y+ L+ Y + G +
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKRE 490
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
EA F +L + T P Y+VM++ L + A ++R++ G P Y +
Sbjct: 491 EAEDTFS-CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELM 549
Query: 239 INGLCKARRANEARRLLSEFRE-AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
I GL K R+++ ++ + + E G P I+ V CF + + I + G
Sbjct: 550 ILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAI-----TNG 604
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
Y + +++ + +GR EA E+ E + + +I L+ + + AL
Sbjct: 605 YELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAAL 664
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLC 383
D+Y +HG C
Sbjct: 665 -------------DEYFADPCVHGWC 677
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 123/276 (44%), Gaps = 2/276 (0%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT 96
I K + + G + + + I +CK K++ AE ++ + + ++ +N+
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
++ Y + +V +R+KE GL PD +YN+L+ R + +M
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
+ P + +Y L+ + + ++A ++F++ LLS + Y+ M+ +G A
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEE-LLSKGLKLDRSFYHTMMKISRDSGSDSKA 1051
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC 276
+ + ++ G P + T + L+ + EA ++LS ++ E + +++V++
Sbjct: 1052 EKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Query: 277 CFRCGRLEQGLEILTEMRSKGYTFDGFAY-CTVVAA 311
R G+E L EM+ +G D + C V AA
Sbjct: 1112 YLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAA 1147
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G LP + + +I+ C+ ++ M+EA ++ +NS++ + T
Sbjct: 887 GYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKT 946
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+ ++ ++ E+ + PD +YN L+ Y R P+E + + + + DP TY +I+
Sbjct: 947 VQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQ-MRNLGLDPKLDTYKSLIS 1005
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
K + A +F L +G + Y+ ++ + ++A +LL + AG EP
Sbjct: 1006 AFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEP 1065
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
T +M G ++ ++L+ ++ Y +V+ A +++ E
Sbjct: 1066 TLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERL 1125
Query: 326 EQMMSNGVEPD 336
+M G+EPD
Sbjct: 1126 LEMKKEGLEPD 1136
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 148/272 (54%), Gaps = 1/272 (0%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
+ T+I+ C+ ++ +L +M+E + V+ YN+++ + G ++F +M
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
+ I PDV +Y+ ++ + R G +A ++ +D ++ + +P T++ +IN L K G V
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRD-MIERQINPDVVTFSALINALVKEGKV 162
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
A ++ ++ RRG P +TYN++I+G CK R N+A+R+L P+ +TF+T+
Sbjct: 163 SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
+N + R++ G+EI EM +G + Y T++ + G + A ++ M+S+GV
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEK 365
P+ ++ +M+ + + +A +++ ++K
Sbjct: 283 APNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 159/318 (50%), Gaps = 5/318 (1%)
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
M E G PDV+++ +LM+G +G L + D+M+E +P Y +++ ++G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYN 236
+ A + + YN +I+ LCK+G+ +A ++F + +G P+V+TY+
Sbjct: 57 TESALNLLSK-MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 237 ALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
+I+ C++ R +A +LL + E P+ +TF+ ++N + G++ + EI +M +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA 356
G Y +++ K R+ +A + + M S PD+ +++T+I Y + RVD
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 357 LELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDG 416
+E+ ++ + G + T+T +IHG C+ L+ A L+ M S G N + +L
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 417 LGKAGHIDRALKFFEGME 434
L + +A E ++
Sbjct: 296 LCSKKELRKAFAILEDLQ 313
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 143/304 (47%), Gaps = 11/304 (3%)
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
P T+ ++NGLC G V AL++ + G P Y +INGLCK A L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 255 LSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK 314
LS+ E + + + + +++ + G + TEM KG D Y ++ + +
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 315 TGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYT 374
+GR +A+++ M+ + PD+ +++ +I ++G+V EA E+ + + G T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 375 HTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
+ +I G CK RLN+A + LD M S ++V + +++G KA +D ++ F M
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 435 VR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKN 490
R ++ TYT L+H C+ A L + G T ++++ L S K
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS---KK 300
Query: 491 EAKK 494
E +K
Sbjct: 301 ELRK 304
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 1/266 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I +CK + A +L + + VV +N +ID C+ + M + G+
Sbjct: 48 INGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGI 107
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PDVI+Y+ ++ R G + + MIE +I PDV +++ L++ + G EA
Sbjct: 108 FPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEE 167
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
++ D+L P+T TYN MI+G CK +++A M ++ + P+V+T++ LING
Sbjct: 168 IYGDMLRRG-IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
CKA+R + + E G N +T+TT+++ + G L+ ++L M S G +
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNY 286
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQM 328
+ +++A+L + +A I E +
Sbjct: 287 ITFQSMLASLCSKKELRKAFAILEDL 312
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 39/238 (16%)
Query: 260 EAGHEPNAITFTTVMN--CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGR 317
E G P+ +TFTT+MN CC GR+ Q L ++ M +G+ Y T++ L K G
Sbjct: 3 ETGCRPDVVTFTTLMNGLCCE--GRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 318 VVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI 377
A + +M ++ + YN +I + G A L ++ +G D T++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 378 IIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD 437
+I C++ R +A Q L M ++V + +++ L K G + A + + M R
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 438 SFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
F TI T ++IDG N+AK++
Sbjct: 177 IFPTTI-------------------------------TYNSMIDGFCKQDRLNDAKRM 203
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 19 HPAILNHENPITSFLTQ-RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAEC 77
+P ++ I + + + +++ ++ + ++ +G +T N I CK +L+ A+
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKR 202
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
+L PDVVTF+TLI+ YC+ D G E+ M G+ + ++Y +L+ G
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILM 168
+ G + + MI S + P+ ++ ++
Sbjct: 263 QVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 20 PAILNHENPITSFLTQ-RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECV 78
P + + + I F Q R+ +K + + K S + I CKAK++D +
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
+ + G++ + VT+ TLI +C+ DA ++L M +G+ P+ I++ S+++
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS 298
Query: 139 KGLFPMTLHMFDKMIESE 156
K + + + +SE
Sbjct: 299 KKELRKAFAILEDLQKSE 316
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 183/394 (46%), Gaps = 36/394 (9%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ + + QLDKA C+L V G +PD +T+N +I C+ +LE M +G
Sbjct: 146 VRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGS 205
Query: 123 TPDVISYNSLM----------------SGAVRKGLFPM-------------------TLH 147
PDVI+YN+++ ++ G P +
Sbjct: 206 PPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIE 265
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
+ + M PD+ +YN L++ R G +E V + +L S + +T TYN +++ L
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHIL-SHGLELNTVTYNTLLHSL 324
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
C + Y + + + + P V+TYN LINGLCKAR + A + E P+
Sbjct: 325 CSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDI 384
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
+T+ TV+ + G ++ +E+L +++ Y +V+ L K G + +A E+ Q
Sbjct: 385 VTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQ 444
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M+ G+ PD + ++IY + R V+EA +++ + G G T+ ++I GLCK K
Sbjct: 445 MLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKE 504
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
+ A++ ++ M + G + ++ G+ + G
Sbjct: 505 IEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 186/410 (45%), Gaps = 7/410 (1%)
Query: 88 LPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLH 147
+P + + L+ R D +L M +G PD I+YN ++ +KG L
Sbjct: 136 VPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALV 195
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
+ + M S PDV +YN ++ C F G ++A R +KD L + P TY V++ +
Sbjct: 196 LLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNG-CPPFMITYTVLVELV 254
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
C+ A+ + ++ G P+++TYN+L+N C+ E ++ G E N
Sbjct: 255 CRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNT 314
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
+T+ T+++ ++ EIL M Y Y ++ L K + A + Q
Sbjct: 315 VTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQ 374
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M+ PD+ +YNT++ ++G VD+A+EL+ ++ T+ +I GL K
Sbjct: 375 MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGL 434
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE-----GMEVRDSFTYT 442
+ +A++ M G + + ++ G +A ++ A + + G +R S TY
Sbjct: 435 MKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGS-TYR 493
Query: 443 ILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
+++ LC+ + A + + L G + + A++ G+ G+ +EA
Sbjct: 494 LVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 154/384 (40%), Gaps = 72/384 (18%)
Query: 45 FRIMV-KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT------- 96
R+MV G T N+ I ++CK + A +L D G PDV+T+NT
Sbjct: 162 LRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFD 221
Query: 97 ----------------------------LIDAYCRFVSFDAGCEVLERMKEAGLTPDVIS 128
L++ CR+ EVLE M G PD+++
Sbjct: 222 YGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVT 281
Query: 129 YNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL 188
YNSL++ R+G + ++ + + +YN L+H DE + +++
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEIL-NIM 340
Query: 189 LSAETDPSTATYNVMINGLCK-----------------------------------NGYV 213
P+ TYN++INGLCK G V
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMV 400
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
+A+ + L+ P ++TYN++I+GL K +A L + +AG P+ IT ++
Sbjct: 401 DDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSL 460
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
+ R +E+ ++L E ++G G Y V+ L K + A E+ E M++ G
Sbjct: 461 IYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGC 520
Query: 334 EPDLASYNTMIYLYFRQGRVDEAL 357
+PD Y ++ G EA+
Sbjct: 521 KPDETIYTAIVKGVEEMGMGSEAV 544
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 174/398 (43%), Gaps = 5/398 (1%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D T N ++ C C+++E M P S ++L+ G R + +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
M+ S PD +YN+++ + G A + +D+ LS + P TYN +I +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG-SPPDVITYNTVIRCMFD 221
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
G A+ +++ + G P ++TY L+ +C+ + A +L + G P+ +T
Sbjct: 222 YGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVT 281
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
+ +++N R G LE+ ++ + S G + Y T++ +L E +EI M
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMY 341
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
P + +YN +I + + A++ Q+ ++ D T+ ++ + K ++
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVD 401
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILV 445
+A++ L + + L+ N V+DGL K G + +AL+ + M D T L+
Sbjct: 402 DAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI 461
Query: 446 HNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGL 483
+ CRA A + L G + +T R VI GL
Sbjct: 462 YGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGL 499
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 142/345 (41%), Gaps = 51/345 (14%)
Query: 193 TDPSTATYNVMINGLCKNGYV------------HN-----------------------AL 217
T+ T N +++ LC NG + HN A+
Sbjct: 100 TENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAM 159
Query: 218 SMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCC 277
+ R + G VP+ +TYN +I LCK A LL + +G P+ IT+ TV+ C
Sbjct: 160 CILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCM 219
Query: 278 FRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDL 337
F G EQ + + G Y +V + + A E+ E M G PD+
Sbjct: 220 FDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDI 279
Query: 338 ASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
+YN+++ R+G ++E ++ I G + T+ ++H LC + +E + L+
Sbjct: 280 VTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNI 339
Query: 398 MNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCR--- 450
M + ++ N +++GL KA + RA+ FF M + D TY ++ + +
Sbjct: 340 MYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGM 399
Query: 451 ---ARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
A L K+ C G T +VIDGL GL +A
Sbjct: 400 VDDAIELLGLLKN--TCCPPGL----ITYNSVIDGLAKKGLMKKA 438
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 126/305 (41%), Gaps = 39/305 (12%)
Query: 19 HPAILNHENPITSFLTQR--ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAE 76
+P I+ + N + ++ +R + +V I+ G L+T N + S+C + D+ E
Sbjct: 276 YPDIVTY-NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVE 334
Query: 77 CVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGA 136
+L + P V+T+N LI+ C+ + +M E PD+++YN+++
Sbjct: 335 EILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAM 394
Query: 137 VRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPS 196
++G+ + + + + P + +YN
Sbjct: 395 SKEGMVDDAIELLGLLKNTCCPPGLITYN------------------------------- 423
Query: 197 TATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
+I+GL K G + AL ++ + G P+ +T +LI G C+A EA ++L
Sbjct: 424 -----SVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLK 478
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
E G+ T+ V+ + +E +E++ M + G D Y +V + + G
Sbjct: 479 ETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Query: 317 RVVEA 321
EA
Sbjct: 539 MGSEA 543
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 164/322 (50%), Gaps = 9/322 (2%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
+ G +P+ TFNTLI AY R SF+ V RM +AG+TPD+ +YN++++ R G++
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYF---RLG-MPDEANRVFKDVLLSAETDPSTAT 199
+ + +M + +P+ +Y L+H Y +G M A V+ V+ +P
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI-----EPRAVL 596
Query: 200 YNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR 259
++ K + A F L+ RGF P++ T N++++ + + +A +L +
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 260 EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVV 319
E G P+ T+ ++M R + EIL E+ +KG D +Y TV+ A + R+
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 716
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIII 379
+A I +M ++G+ PD+ +YNT I Y +EA+ +V + K G +Q T+ I+
Sbjct: 717 DASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Query: 380 HGLCKAKRLNEAVQHLDHMNSL 401
G CK R +EA ++ + +L
Sbjct: 777 DGYCKLNRKDEAKLFVEDLRNL 798
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 170/351 (48%), Gaps = 6/351 (1%)
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
++E G + DV SY SL+S G + +++F KM E +P + +YN++++ + ++G
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT 258
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN-ALSMFRNLQRRGFVPEVLTY 235
P + + S P TYN +I CK G +H A +F ++ GF + +TY
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTY 317
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
NAL++ K+ R EA ++L+E G P+ +T+ ++++ R G L++ +E+ +M
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDE 355
KG D F Y T+++ + G+V A I E+M + G +P++ ++N I +Y +G+ E
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 356 ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD 415
+++ D+I G D T ++ + +E M GF N ++
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497
Query: 416 GLGKAGHIDRALKFFEGM----EVRDSFTYTILVHNLCRARRFLCASKHLV 462
+ G ++A+ + M D TY ++ L R + + K L
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/459 (20%), Positives = 205/459 (44%), Gaps = 40/459 (8%)
Query: 34 TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVT 93
+ R + V +++ G S S N I++ + LD+A + + G PDV T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
+ TL+ + R ++ + E M+ AG P++ ++N+ + +G F + +FD++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
+ PD+ ++N L+ + + GM E + VFK+ + A P T+N +I+ + G
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE-MKRAGFVPERETFNTLISAYSRCGSF 505
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
A++++R + G P++ TYN ++ L + ++ ++L+E + +PN +T+ ++
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 274 MNC-----------------------------------CFRCGRLEQGLEILTEMRSKGY 298
++ C +C L + +E++ +G+
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
+ D ++V+ + V +A+ + + M G P +A+YN+++Y++ R ++ E
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
++ +I +G D ++ +I+ C+ R+ +A + M + G +++ N +
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 419 KAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARR 453
+ A+ M + TY +V C+ R
Sbjct: 746 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 174/364 (47%), Gaps = 2/364 (0%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
R++ + N+ + G SL I++ + + +A V + G P ++T+N
Sbjct: 188 RVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYN 247
Query: 96 TLIDAYCRF-VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
+++ + + ++ ++E+MK G+ PD +YN+L++ R L +F++M
Sbjct: 248 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 307
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVH 214
+ D +YN L+ Y + P EA +V +++L+ + PS TYN +I+ ++G +
Sbjct: 308 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS-PSIVTYNSLISAYARDGMLD 366
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
A+ + + +G P+V TY L++G +A + A + E R AG +PN TF +
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Query: 275 NCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
G+ + ++I E+ G + D + T++A + G E + ++M G
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 335 PDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQH 394
P+ ++NT+I Y R G ++A+ + ++ G D T+ ++ L + ++ +
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 395 LDHM 398
L M
Sbjct: 547 LAEM 550
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 150/303 (49%), Gaps = 1/303 (0%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G+ PD T+NTLI R +V E MK AG + D ++YN+L+ +
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+ + ++M+ + P + +YN L+ Y R GM DEA + K+ + T P TY +++
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL-KNQMAEKGTKPDVFTYTTLLS 392
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
G + G V +A+S+F ++ G P + T+NA I + E ++ E G P
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
+ +T+ T++ + G + + EM+ G+ + + T+++A + G +A +
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
+M+ GV PDL++YNT++ R G +++ +++ ++E ++ T+ ++H
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
Query: 386 KRL 388
K +
Sbjct: 573 KEI 575
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 165/366 (45%), Gaps = 12/366 (3%)
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD--- 194
++G +MF+ + E DV+SY L+ + G EA VFK + E D
Sbjct: 185 KEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM----EEDGCK 240
Query: 195 PSTATYNVMINGLCKNGYVHNAL-SMFRNLQRRGFVPEVLTYNALINGLCKARRANEARR 253
P+ TYNV++N K G N + S+ ++ G P+ TYN LI + EA +
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 254 LLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
+ E + AG + +T+ +++ + R ++ +++L EM G++ Y ++++A
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Query: 314 KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQY 373
+ G + EA E+ QM G +PD+ +Y T++ + R G+V+ A+ + +++ G +
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC 420
Query: 374 THTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
T I + E ++ D +N G ++V N +L G+ G F+ M
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 434 E----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLK 489
+ V + T+ L+ R F A L G +T V+ L G+
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 490 NEAKKV 495
+++KV
Sbjct: 541 EQSEKV 546
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 36/270 (13%)
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
++I+ L K G V +A +MF LQ GF +V +Y +LI+ + R EA + + E
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 262 GHEPNAITFTTVMN------------------------------------CCFRCGRLEQ 285
G +P IT+ ++N CC R ++
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 286 GLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIY 345
++ EM++ G+++D Y ++ K+ R EA ++ +M+ NG P + +YN++I
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 346 LYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGF 405
Y R G +DEA+EL +Q+ ++G D +T+T ++ G +A ++ A+ + M + G
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 406 NLVASNCVLDGLGKAGHIDRALKFFEGMEV 435
N+ N + G G +K F+ + V
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%)
Query: 35 QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTF 94
Q + + V + +G + S N + ++ K+E +L + + G+ PD++++
Sbjct: 643 QMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISY 702
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
NT+I AYCR + M+ +G+ PDVI+YN+ + +F + + MI+
Sbjct: 703 NTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV 187
RP+ +YN ++ Y +L DEA +D+
Sbjct: 763 HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 39/193 (20%)
Query: 293 MRSKGYT--FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQ 350
M+ K Y D +++ L K GRV A + + +G D+ SY ++I +
Sbjct: 162 MKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANS 221
Query: 351 GRVDEALELVDQIEKEG--------------------PGN----------------DQYT 374
GR EA+ + ++E++G P N D YT
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYT 281
Query: 375 HTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
+ +I + EA Q + M + GF ++ V N +LD GK+ A+K M
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM- 340
Query: 435 VRDSFTYTILVHN 447
V + F+ +I+ +N
Sbjct: 341 VLNGFSPSIVTYN 353
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 188/434 (43%), Gaps = 40/434 (9%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N +A+ +A +A V+ K GV+P+ +T+ T+IDAY + D ++ MKE
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
AG P+ +YN+++S +K + M M + P+ ++N ++ GM
Sbjct: 415 AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKF 474
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
NRVF++ + S +P T+N +I+ + G +A M+ + R GF V TYNAL+
Sbjct: 475 VNRVFRE-MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALL 533
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCC---------------------- 277
N L + ++S+ + G +P +++ ++ C
Sbjct: 534 NALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIF 593
Query: 278 -------------FRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
F+C L T + GY D + ++++ + +A+ I
Sbjct: 594 PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI 653
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
E + +G+ PDL +YN+++ +Y R+G +A E++ +EK D ++ +I G C+
Sbjct: 654 LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD----SFT 440
+ EAV+ L M G + N + G G E M D T
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELT 773
Query: 441 YTILVHNLCRARRF 454
+ ++V CRA ++
Sbjct: 774 FKMVVDGYCRAGKY 787
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 169/347 (48%), Gaps = 7/347 (2%)
Query: 79 LIDGVKLG-VLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
L+D + L L DV + T++ AY R ++ ++ ERMKE G +P +++YN ++
Sbjct: 197 LLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFG 256
Query: 138 RKG-LFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPS 196
+ G + L + D+M ++ D ++ + ++ R G+ EA F + L S +P
Sbjct: 257 KMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE-LKSCGYEPG 315
Query: 197 TATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
T TYN ++ K G ALS+ + ++ + +TYN L+ +A + EA ++
Sbjct: 316 TVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE 375
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
+ G PNAIT+TTV++ + G+ ++ L++ M+ G + Y V++ L K
Sbjct: 376 MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKS 435
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG--PGNDQYT 374
R E ++ M SNG P+ A++NTM+ L +G + +++ G P D +
Sbjct: 436 RSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFN 495
Query: 375 HTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
I +G C ++ +A + M GF + N +L+ L + G
Sbjct: 496 TLISAYGRCGSEV--DASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 183/390 (46%), Gaps = 15/390 (3%)
Query: 84 KLGVLPDVVTFNTLIDAYCRF-VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
++G P +VT+N ++D + + S+ VL+ M+ GL D + ++++S R+GL
Sbjct: 238 EMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLL 297
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPS-TATYN 201
F ++ P +YN L+ + + G+ EA V K+ + + P+ + TYN
Sbjct: 298 REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE--MEENSCPADSVTYN 355
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
++ + G+ A + + ++G +P +TY +I+ KA + +EA +L +EA
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
G PN T+ V++ + R + +++L +M+S G + + + T++A G
Sbjct: 416 GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFV 475
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHG 381
+ + +M S G EPD ++NT+I Y R G +A ++ ++ + G T+ +++
Sbjct: 476 NRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA 535
Query: 382 LCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH---IDRALKFFEGMEVRDS 438
L + + M S GF + + +L K G+ I+R + ++ S
Sbjct: 536 LARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPS 595
Query: 439 FTY--TILVHNL-CRA-----RRFLCASKH 460
+ T+L+ N CRA R F KH
Sbjct: 596 WMLLRTLLLANFKCRALAGSERAFTLFKKH 625
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 158/357 (44%), Gaps = 10/357 (2%)
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
R+ + + + DK+ E DV +Y ++H Y R G ++A +F + + P+
Sbjct: 187 RESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLF-ERMKEMGPSPTL 245
Query: 198 ATYNVMINGLCKNG-YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
TYNV+++ K G L + ++ +G + T + +++ + EA+ +
Sbjct: 246 VTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFA 305
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
E + G+EP +T+ ++ + G + L +L EM D Y +VAA V+ G
Sbjct: 306 ELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHT 376
EA + E M GV P+ +Y T+I Y + G+ DEAL+L +++ G + T+
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 425
Query: 377 IIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEV- 435
++ L K R NE ++ L M S G N N +L G G + F M+
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC 485
Query: 436 -----RDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
RD+F I + C + + ASK + GF T A+++ L G
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSE--VDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 160/347 (46%), Gaps = 10/347 (2%)
Query: 65 SMCKAKQLDK-AECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLT 123
++C K +DK V + G PD TFNTLI AY R S ++ M AG
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 124 PDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFR----LGMPDE 179
V +YN+L++ RKG + ++ M +P SY++++ CY + LG+
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
NR+ + + PS ++ K + + F ++ G+ P+++ +N+++
Sbjct: 584 ENRIKEGQIF-----PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSML 638
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ + ++A +L RE G P+ +T+ ++M+ R G + EIL +
Sbjct: 639 SIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLK 698
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D +Y TV+ + G + EA + +M G+ P + +YNT + Y G E ++
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFN 406
++ + K ++ T +++ G C+A + +EA+ + + + F+
Sbjct: 759 IECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFD 805
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 178/374 (47%), Gaps = 29/374 (7%)
Query: 81 DGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAG--LTPDVISYNSLMSGAVR 138
DGV L D L+D+ R F++ VL+ M+E G L P V Y+S++ V+
Sbjct: 121 DGVNL----DQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSV--YDSVLIALVK 174
Query: 139 KGLFPMTLHMFDKMIESEIR---------------PDVWSYNILMHCYFRLGMPDEANRV 183
K + L + K++E+ P + N L+ R M E RV
Sbjct: 175 KHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRV 234
Query: 184 FKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRG------FVPEVLTYNA 237
F+ + T +YN+ I+G G + ALS+F+ ++ R F P++ TYN+
Sbjct: 235 FEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNS 294
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LI+ LC +A +A + E + +GHEP+ T+ ++ C + R++ + I EM+ G
Sbjct: 295 LIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNG 354
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
+ D Y ++ +K +V EA ++ E+M+ GV +YN +I FR GR +
Sbjct: 355 FVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGF 414
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
L ++K+G D T +I+ LC+ +L AV+ ++ M + GF +LV + +L G
Sbjct: 415 TLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGF 474
Query: 418 GKAGHIDRALKFFE 431
K G D K +
Sbjct: 475 HKQGRWDWKEKLMK 488
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 9/287 (3%)
Query: 88 LPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAG-LTPDVISYNSLMSGAVRKGLFPMTL 146
LP V N L+ R V E++K D SYN + G G L
Sbjct: 209 LPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAAL 268
Query: 147 HMFDKMIE------SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATY 200
+F +M E S PD+ +YN L+H G +A V+ ++ +S +P +TY
Sbjct: 269 SLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGH-EPDNSTY 327
Query: 201 NVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
++I G CK+ + +A+ ++ +Q GFVP+ + YN L++G KAR+ EA +L + +
Sbjct: 328 RILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQ 387
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVE 320
G + T+ +++ FR GR E G + +++ KG D + V L + G++
Sbjct: 388 EGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEG 447
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
A ++ E+M + G DL + ++++ + +QGR D +L+ I +EG
Sbjct: 448 AVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHI-REG 493
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 200/500 (40%), Gaps = 77/500 (15%)
Query: 74 KAECVLIDGVKL-GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSL 132
K ++ D +K+ G PD T+ LI C+ D + M+ G PD I YN L
Sbjct: 306 KDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCL 365
Query: 133 MSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAE 192
+ G ++ +F+KM++ +R W+YNIL+ FR G + +F D+ +
Sbjct: 366 LDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQ 425
Query: 193 TDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF------------------------ 228
T++++ LC+ G + A+ + ++ RGF
Sbjct: 426 F-VDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKE 484
Query: 229 -----------VPEVLTYNALINGLCKARRANEAR---------RLLSEFREAGHEPNAI 268
VP VL +NA + K ++ + L G E +
Sbjct: 485 KLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGA 544
Query: 269 TFTTVM----NCCFRCGRLEQ------------GLEILTEMRSKGYTFDGFAYCTVVAAL 312
+ V + ++Q GL + +K +FD T ++
Sbjct: 545 SAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIY 604
Query: 313 VKTGRVVEADEIAEQMMSNGVEPDLASY--NTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
+ G + A ++ E GV DL SY N+M+ + ++G A ++DQ+ +
Sbjct: 605 LSKGDLSLACKLFEIFNGMGVT-DLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAA 663
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
D T+ +II GL K R + A LD + G ++V N +++ LGKA +D A + F
Sbjct: 664 DIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLF 723
Query: 431 EGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISD 486
+ M+ D +Y ++ +A + A K+L A L G V D ++ D
Sbjct: 724 DHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAG-----CLPNHVTDTIL-D 777
Query: 487 GLKNEAKKVRLKIRKAQLLR 506
L E +K R K KA +R
Sbjct: 778 YLGKEMEKARFK--KASFVR 795
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 180/409 (44%), Gaps = 30/409 (7%)
Query: 35 QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTF 94
+++T + + +++ +G S NI I + + + + + D K G D +TF
Sbjct: 373 RKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITF 432
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
+ + CR + +++E M+ G + D+++ +SL+ G ++G + + + E
Sbjct: 433 SIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIRE 492
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATY-NVM-INGLCKNGY 212
+ P+V +N + L P ++ + + PS ++ ++M + G +G
Sbjct: 493 GNLVPNVLRWNAGVEA--SLKRPQSKDKDYTPMF------PSKGSFLDIMSMVGSEDDGA 544
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
+S + + + + ++ L R N+ + L R E +F
Sbjct: 545 SAEEVSPMED--------DPWSSSPYMDQLAHQR--NQPKPLFGLARGQRVEAKPDSFDV 594
Query: 273 VMNCCFRCGRLEQG--------LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
M F L +G EI M T + Y +++++ VK G A +
Sbjct: 595 DMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLT--SYTYNSMMSSFVKKGYFQTARGV 652
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
+QM N D+A+YN +I + GR D A ++D++ K+G D + +I+ L K
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
A RL+EA Q DHM S G ++V+ N +++ KAG + A K+ + M
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAM 761
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 182/460 (39%), Gaps = 61/460 (13%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKE------AGLTPDVISYNSLMSGAVRKGLFP 143
D ++N I + + DA + + MKE + PD+ +YNSL+ G
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAK 306
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
L ++D++ S PD +Y IL+ + D+A R++ ++ + P T YN +
Sbjct: 307 DALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFV-PDTIVYNCL 365
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
++G K V A +F + + G TYN LI+GL + RA L + ++ G
Sbjct: 366 LDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQ 425
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
+AITF+ V R G+LE ++++ EM ++G++ D +++ K GR ++
Sbjct: 426 FVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEK 485
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQ-------------------------------GR 352
+ + + + P++ +N + ++
Sbjct: 486 LMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGAS 545
Query: 353 VDEALELVDQIEKEGPGNDQYTHT----IIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLV 408
+E + D P DQ H + GL + +R+ F++
Sbjct: 546 AEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDS----------FDVD 595
Query: 409 ASNCVLDGLGKAGHIDRALKFFE---GMEVRD--SFTYTILVHNLCRARRFLCASKHLVA 463
N L G + A K FE GM V D S+TY ++ + + F A L
Sbjct: 596 MMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQ 655
Query: 464 CLQ--CGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRK 501
+ C + AT +I GL G + A V ++ K
Sbjct: 656 MFENFCAADI--ATYNVIIQGLGKMGRADLASAVLDRLTK 693
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 145/357 (40%), Gaps = 60/357 (16%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG+ + +I +C+ +L+ A ++ + G D+VT ++L+ + + +D
Sbjct: 423 KGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDW 482
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRK---------GLFPMTLHMFD--KMIESE-- 156
++++ ++E L P+V+ +N+ + ++++ +FP D M+ SE
Sbjct: 483 KEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDD 542
Query: 157 ---------IRPDVWS--------------------------------------YNILMH 169
+ D WS N +
Sbjct: 543 GASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLS 602
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
Y G A ++F+ TD ++ TYN M++ K GY A + +
Sbjct: 603 IYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCA 662
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
++ TYN +I GL K RA+ A +L + G + + + T++N + RL++ ++
Sbjct: 663 ADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQL 722
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
M+S G D +Y T++ K G++ EA + + M+ G P+ + + YL
Sbjct: 723 FDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDYL 779
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 174/415 (41%), Gaps = 35/415 (8%)
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
G +Y+ + R GL + M E + D IL+ R G + A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALS-MFRNLQRR------------- 226
V D + + + Y+ ++ L K + ALS +F+ L+
Sbjct: 147 LGVL-DYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVII 205
Query: 227 -GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV-MNCC---FRC- 280
++P + N L+ GL +A +E +R+ + + F T N C F C
Sbjct: 206 VSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKR----FKFDTWSYNICIHGFGCW 261
Query: 281 GRLEQGLEILTEMRSK----GYTF--DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
G L+ L + EM+ + G +F D Y +++ L G+ +A + +++ +G E
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 335 PDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQH 394
PD ++Y +I + R+D+A+ + +++ G D + ++ G KA+++ EA Q
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 395 LDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCR 450
+ M G + N ++DGL + G + F ++ + D+ T++I+ LCR
Sbjct: 382 FEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCR 441
Query: 451 ARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQLL 505
+ A K + GF V T +++ G G + +K+ IR+ L+
Sbjct: 442 EGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLV 496
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 192/450 (42%), Gaps = 40/450 (8%)
Query: 85 LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
LG+ P +N +IDA + S D ++M+ G PD +YN L+ G +KG+
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
+ + +M + RP+V++Y IL+ + G DEA + +++ + +P+ AT +
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQL-EMMRVRKLNPNEATIRTFV 292
Query: 205 NGL------CK-----------------------------NGYVHNALSMFRNLQRRGFV 229
+G+ CK N R + RG++
Sbjct: 293 HGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYI 352
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P+ T+NA ++ L K E R+ F G +P + ++ R +G
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
L +M G ++Y V+ L K R+ A +M G+ P+L ++NT + Y
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
+G V + +++++ G D T ++II+ LC+AK + +A M G N +
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 410 SNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACL 465
N ++ G DR++K F M+ D + Y + + C+ R+ A + L L
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 466 QCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
+ G + T +I L G ++EA+++
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESEAREM 622
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 1/293 (0%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G +PD TFN + + C + + G+ P Y L+ + F
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+M + V+SYN ++ C + + A +F + P+ T+N ++
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA-AMFLTEMQDRGISPNLVTFNTFLS 468
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
G G V + L GF P+V+T++ +IN LC+A+ +A E E G EP
Sbjct: 469 GYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEP 528
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
N IT+ ++ C G ++ +++ +M+ G + D +AY + + K +V +A+E+
Sbjct: 529 NEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELL 588
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
+ M+ G++PD +Y+T+I GR EA E+ IE+ G D YT ++
Sbjct: 589 KTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 180/432 (41%), Gaps = 40/432 (9%)
Query: 112 EVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCY 171
E+L+ ++++G L+ R GL +F ++ ++P YN ++
Sbjct: 131 ELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190
Query: 172 FRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
+ D A F+ + S P TYN++I+G+CK G V A+ + + +++ G P
Sbjct: 191 VKSNSLDLAYLKFQQ-MRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPN 249
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRC----------- 280
V TY LI+G A R +EA + L R PN T T ++ FRC
Sbjct: 250 VFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLV 309
Query: 281 GRLEQGL------------------------EILTEMRSKGYTFDGFAYCTVVAALVKTG 316
G +E+ + L ++ +GY D + ++ L+K
Sbjct: 310 GFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGH 369
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHT 376
+VE I + +S GV+P Y ++ R E + Q+ +G + Y++
Sbjct: 370 DLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYN 429
Query: 377 IIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR 436
+I LCKA+R+ A L M G NLV N L G G + + E + V
Sbjct: 430 AVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH 489
Query: 437 ----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
D T++++++ LCRA+ A L+ G + + T +I S G + +
Sbjct: 490 GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRS 549
Query: 493 KKVRLKIRKAQL 504
K+ K+++ L
Sbjct: 550 VKLFAKMKENGL 561
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 175/420 (41%), Gaps = 40/420 (9%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI I +CK +D+A ++ + G P+V T+ LID + D + LE M+
Sbjct: 219 NILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRV 278
Query: 120 AGLTPDVISYNSLMSGAVR-----------------------------------KGLFPM 144
L P+ + + + G R +
Sbjct: 279 RKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKE 338
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
T K+ E PD ++N M C + E R+F D +S P Y V++
Sbjct: 339 TGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIF-DGFVSRGVKPGFNGYLVLV 397
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
L + + G + V +YNA+I+ LCKARR A L+E ++ G
Sbjct: 398 QALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGIS 457
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
PN +TF T ++ G +++ +L ++ G+ D + ++ L + + +A +
Sbjct: 458 PNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDC 517
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
++M+ G+EP+ +YN +I G D +++L ++++ G D Y + I CK
Sbjct: 518 FKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCK 577
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFT 440
+++ +A + L M +G + + ++ L ++G A + F +E V DS+T
Sbjct: 578 MRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 1/235 (0%)
Query: 35 QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTF 94
QR + ++ V G S N I +CKA++++ A L + G+ P++VTF
Sbjct: 404 QRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTF 463
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
NT + Y VLE++ G PDVI+++ +++ R F +M+E
Sbjct: 464 NTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLE 523
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVH 214
I P+ +YNIL+ G D + ++F + + P YN I CK V
Sbjct: 524 WGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENG-LSPDLYAYNATIQSFCKMRKVK 582
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
A + + + R G P+ TY+ LI L ++ R +EAR + S G P++ T
Sbjct: 583 KAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 275 NCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
N FR G L +E+L E+R GY C ++ + + G +++ Q+ G++
Sbjct: 118 NALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMK 177
Query: 335 PDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQH 394
P YN +I + +D A Q+ +G D++T+ I+IHG+CK ++EA++
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 395 LDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCR 450
+ M G N+ ++DG AG +D ALK E M VR + T VH + R
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 178/392 (45%), Gaps = 37/392 (9%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
++ G P ++T+ TL+ A R F + ++ ++++ GL PD I +N++++ + G
Sbjct: 346 IEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNL 405
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
+ +F+KM ES +P ++N L+ Y ++G +E++R+ +L P+ T N+
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNI 465
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL------------------------ 238
++ C + A ++ +Q G P+V+T+N L
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 239 ------------INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
+NG C+ + EA R +E G PN F +++ ++
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
E++ M G D + T++ A G + +EI M+ G++PD+ +++ +
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG 645
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM-NSLGFGF 405
Y R G ++A ++++Q+ K G + +T II G C A + +A+Q M +G
Sbjct: 646 YARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSP 705
Query: 406 NLVASNCVLDGLGKAGHIDRALKFFEGMEVRD 437
NL ++ G G+A +A + + ME ++
Sbjct: 706 NLTTYETLIWGFGEAKQPWKAEELLKDMEGKN 737
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 186/419 (44%), Gaps = 12/419 (2%)
Query: 11 FNAAYPFTH-PAILNHENPITSFLTQRITHSK-NVTFRIMVKGRSLSTKFLNICIASMCK 68
FN H P+++ + +T+ Q+ HS ++ ++ G T N I + +
Sbjct: 342 FNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSE 401
Query: 69 AKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM-KEAGLTPDVI 127
+ LD+A + + G P TFNTLI Y + + +L+ M ++ L P+
Sbjct: 402 SGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDR 461
Query: 128 SYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV 187
+ N L+ + ++ KM ++PDV ++N L Y R+G A +
Sbjct: 462 TCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPR 521
Query: 188 LLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARR 247
+L + P+ T ++NG C+ G + AL F ++ G P + +N+LI G
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 248 ANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCT 307
+ ++ E G +P+ +TF+T+MN G +++ EI T+M G D A+
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 308 VVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQI-EKE 366
+ + G +A++I QM GV P++ Y +I + G + +A+++ ++
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Query: 367 GPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVAS----NCVLDGLGKAG 421
G + T+ +I G +AK+ +A + L M G N+V + + DG G
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEELLKDME----GKNVVPTRKTMQLIADGWKSIG 756
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 3/277 (1%)
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
DV S LM+ G P EA+ +F + L+ PS TY ++ L + + H+ LS+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIF-NTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSL 376
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
+++ G P+ + +NA+IN ++ ++A ++ + +E+G +P A TF T++ +
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTV-VAALVKTGRVVEADEIAEQMMSNGVEPDLA 338
G+LE+ +L M C + V A ++ EA I +M S GV+PD+
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 339 SYNTMIYLYFRQGRVDEALEL-VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
++NT+ Y R G A ++ + ++ + T I++G C+ ++ EA++
Sbjct: 497 TFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYR 556
Query: 398 MNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
M LG NL N ++ G +D + + ME
Sbjct: 557 MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME 593
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 2/177 (1%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
+ GV PDVVTF+TL++A+ E+ M E G+ PD+ +++ L G R G
Sbjct: 594 EFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPE 653
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
+ ++M + +RP+V Y ++ + G +A +V+K + P+ TY +
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL--CKARRANEARRLLSEF 258
I G + A + ++++ + VP T + +G +N+A L S F
Sbjct: 714 IWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVSNSNDANTLGSSF 770
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 206/480 (42%), Gaps = 81/480 (16%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAG 110
G +T N I CK+ QL +AE + + PD T+NTL+D YCR D
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 111 CEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHC 170
++ ++M + + P V++YN L+ G R G F L ++ M++ + D S + L+
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 171 YFRLGMPDEANRVFKDVLLSA-ETDPSTATYNVMINGLCKNGYVHNALSMFRN------- 222
F+LG +EA +++++VL TD T T NVMI+GLCK V+ A + N
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLLTD--TITLNVMISGLCKMEKVNEAKEILDNVNIFRCK 538
Query: 223 ----------------------------LQRRGFVPEVLTYNALINGLCKARRANEARRL 254
++R+G P + YN LI+G K R N+ L
Sbjct: 539 PAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADL 598
Query: 255 LSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK 314
+ E R G P T+ ++ G +++ EM KG T + + +L +
Sbjct: 599 VIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFR 658
Query: 315 TGRVVEA--------------------DEIAE---------QMMSNGVE---------PD 336
++ EA E E Q ++ VE P+
Sbjct: 659 LDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPN 718
Query: 337 LASYNTMIYLYFRQGRVDEALELV-DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHL 395
YN I + G++++A +L D + + D+YT+TI+IHG A +N+A
Sbjct: 719 NIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLR 778
Query: 396 DHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRA 451
D M G N+V N ++ GL K G++DRA + + + ++ TY L+ L ++
Sbjct: 779 DEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKS 838
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 197/438 (44%), Gaps = 41/438 (9%)
Query: 60 NICIASMCKAKQLDKAECVLIDG-VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
+I + + C++ +DKA + LG+ +VVT+N+LI+ Y + VL M
Sbjct: 229 SIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMS 288
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
E G++ +V++Y SL+ G +KGL H+F+ + E ++ D Y +LM Y R G
Sbjct: 289 ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIR 348
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+A RV D ++ +T N +ING CK+G + A +F + P+ TYN L
Sbjct: 349 DAVRV-HDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTL 407
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
++G C+A +EA +L + + P +T+ ++ KGY
Sbjct: 408 VDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL---------------------KGY 446
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
+ + G + + + M+ GV D S +T++ F+ G +EA++
Sbjct: 447 S--------------RIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK 492
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
L + + G D T ++I GLCK +++NEA + LD++N + + G
Sbjct: 493 LWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYY 552
Query: 419 KAGHIDRALKFFEGMEVRDSF----TYTILVHNLCRARRFLCASKHLVACLQCGFQVLKA 474
K G++ A E ME + F Y L+ + R + ++ G A
Sbjct: 553 KVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVA 612
Query: 475 TRRAVIDGLISDGLKNEA 492
T A+I G + G+ ++A
Sbjct: 613 TYGALITGWCNIGMIDKA 630
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 178/365 (48%), Gaps = 4/365 (1%)
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
F+ ++ Y V + M G P ++S NSL+S VRKG + LH++D+M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
I E+ PDV++ +I+++ Y R G D+A K+ S + + TYN +ING G
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
V + R + RG V+TY +LI G CK EA + +E + +
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
+M+ R G++ + + M G + +++ K+G++VEA++I +M
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
++PD +YNT++ Y R G VDEAL+L DQ+ ++ T+ I++ G + ++ +
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNL 448
M G + ++ + +L+ L K G + A+K +E + R D+ T +++ L
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 516
Query: 449 CRARR 453
C+ +
Sbjct: 517 CKMEK 521
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/518 (22%), Positives = 220/518 (42%), Gaps = 79/518 (15%)
Query: 67 CKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDV 126
C+ Q+ A V + +++GV + N+LI+ YC+ ++ RM + L PD
Sbjct: 342 CRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 401
Query: 127 ISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKD 186
+YN+L+ G R G L + D+M + E+ P V +YNIL+ Y R+G + ++K
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK- 460
Query: 187 VLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKAR 246
++L + + + ++ L K G + A+ ++ N+ RG + + +T N +I+GLCK
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 247 RANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYC 306
+ NEA+ +L +P T+ + + ++ G L++ + M KG Y
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYN 580
Query: 307 TVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE 366
T+++ K + + ++ ++ + G+ P +A+Y +I + G +D+A ++ ++
Sbjct: 581 TLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK 640
Query: 367 GPGNDQYTHTIIIHGLCKAKRLNEA---VQHLDHMNSLGFGF------------------ 405
G + + I + L + +++EA +Q + + L G+
Sbjct: 641 GITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQ 700
Query: 406 -----------------NLVASNCVLDGLGKAGHIDRALKFFEGME-----VRDSFTYTI 443
N + N + GL KAG ++ A K F + + D +TYTI
Sbjct: 701 KIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTI 760
Query: 444 LVH-----------------------------------NLCRARRFLCASKHLVACLQCG 468
L+H LC+ A + L Q G
Sbjct: 761 LIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKG 820
Query: 469 FQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQLLR 506
T +IDGL+ G EA +++ K+ + L+R
Sbjct: 821 ITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVR 858
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 154/361 (42%), Gaps = 75/361 (20%)
Query: 47 IMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKL--------------------- 85
++ +G T LN+ I+ +CK +++++A+ +L D V +
Sbjct: 497 VLARGLLTDTITLNVMISGLCKMEKVNEAKEIL-DNVNIFRCKPAVQTYQALSHGYYKVG 555
Query: 86 ---------------GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYN 130
G+ P + +NTLI ++ + +++ ++ GLTP V +Y
Sbjct: 556 NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYG 615
Query: 131 SLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFK----- 185
+L++G G+ +MIE I +V + + + FRL DEA + +
Sbjct: 616 ALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDF 675
Query: 186 DVLL-------------------------SAETD-------PSTATYNVMINGLCKNGYV 213
D+LL S E P+ YNV I GLCK G +
Sbjct: 676 DLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKL 735
Query: 214 HNALSMFRNL-QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
+A +F +L F+P+ TY LI+G A N+A L E G PN +T+
Sbjct: 736 EDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNA 795
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
++ + G +++ +L ++ KG T + Y T++ LVK+G V EA + E+M+ G
Sbjct: 796 LIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Query: 333 V 333
+
Sbjct: 856 L 856
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 146/357 (40%), Gaps = 46/357 (12%)
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV--------- 229
E RVFK E S +++++ + G V NAL +F N+ G +
Sbjct: 143 ELVRVFK------EFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSL 196
Query: 230 --------------------------PEVLTYNALINGLCKARRANEARRLLSEFREA-G 262
P+V T + ++N C++ ++A E + G
Sbjct: 197 LSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLG 256
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
E N +T+ +++N G +E +L M +G + + Y +++ K G + EA+
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+ E + + D Y ++ Y R G++ +A+ + D + + G + +I+G
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM----EVRDS 438
CK+ +L EA Q MN + N ++DG +AG++D ALK + M V
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTV 436
Query: 439 FTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
TY IL+ R F L+ G + + +++ L G NEA K+
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL 493
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 4/191 (2%)
Query: 40 SKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLID 99
K V F +++ G +FL + K +++ AE V K ++P+ + +N I
Sbjct: 670 QKIVDFDLLLPGYQSLKEFLEASATTCLKTQKI--AESVENSTPKKLLVPNNIVYNVAIA 727
Query: 100 AYCRFVSFDAGCEVLERMKEAG-LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIR 158
C+ + ++ + + PD +Y L+ G G + D+M I
Sbjct: 728 GLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGII 787
Query: 159 PDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALS 218
P++ +YN L+ +LG D A R+ + T P+ TYN +I+GL K+G V A+
Sbjct: 788 PNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT-PNAITYNTLIDGLVKSGNVAEAMR 846
Query: 219 MFRNLQRRGFV 229
+ + +G V
Sbjct: 847 LKEKMIEKGLV 857
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 122/295 (41%), Gaps = 25/295 (8%)
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSE------------------FREAGHEP 265
+++ F P+ Y +++ L +AR + + L E F+E P
Sbjct: 96 KQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSP 155
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
F ++ G ++ L + M + G + ++++ LV+ G A +
Sbjct: 156 T--VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVY 213
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE-GPGNDQYTHTIIIHGLCK 384
+QM+S V PD+ + + ++ Y R G VD+A+ + E G + T+ +I+G
Sbjct: 214 DQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAM 273
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFT 440
+ + L M+ G N+V ++ G K G ++ A FE ++ V D
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM 333
Query: 441 YTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
Y +L+ CR + A + ++ G + ++I+G G EA+++
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 191/390 (48%), Gaps = 4/390 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N ++ +CK + D+A +L G+ P+VV++N ++ +CR + D V + E
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GL P+ +Y+ L+ G R L + + M S I + Y +++ ++G +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + +++ S +YN +I+G K G + +A++ + + G P V+TY +L+
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
NGLCK R ++A + E + G + + + +++ + +E + +E+ +G
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
Y ++++ G +V A ++ ++M+ +G+ DL +Y T+I + G + A EL
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+++ G D+ +T+I++GL K + + V+ + M N++ N V+ G +
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 420 AGHIDRALKFFEGMEVR----DSFTYTILV 445
G++D A + + M + D T+ ILV
Sbjct: 807 EGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/503 (23%), Positives = 216/503 (42%), Gaps = 53/503 (10%)
Query: 31 SFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVL--IDGVKLGVL 88
S ++ + V R + +G + ++ + + CK L A +L + KL V
Sbjct: 243 SLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCV- 301
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
P T+ ++I A + + D + + M G++ +V++ SL++G + L +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
FDKM + P+ ++++L+ + + G ++A +K + + T PS + +I G
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLT-PSVFHVHTIIQGWL 420
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
K AL +F G V N +++ LCK + +EA LLS+ G PN +
Sbjct: 421 KGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 269 TFTTVM-----------------------------------NCCFRCGRLEQGLEILTEM 293
++ VM + CFR + LE++ M
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDL----ASYNTMIYLYFR 349
S +G Y T++ L K G+ +A E+ M+ E L SYN++I +F+
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE---EKRLCVSCMSYNSIIDGFFK 596
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
+G +D A+ +++ G + T+T +++GLCK R+++A++ D M + G ++ A
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 410 SNCVLDGLGKAGHIDRALKFF-----EGMEVRDSFTYTILVHNLCRARRFLCASKHLVAC 464
++DG K +++ A F EG+ Y L+ + A
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPI-YNSLISGFRNLGNMVAALDLYKKM 715
Query: 465 LQCGFQVLKATRRAVIDGLISDG 487
L+ G + T +IDGL+ DG
Sbjct: 716 LKDGLRCDLGTYTTLIDGLLKDG 738
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 193/468 (41%), Gaps = 46/468 (9%)
Query: 3 LSAAPALHFNAAYPFTHPAILNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNIC 62
L ++P + A+ ++ P+ S L ++ S +F V R+ N
Sbjct: 116 LVSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAK-SFGFEVNSRAF-----NYL 169
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ + K +Q D A ++ ++L V+P N + A + S E+ RM G+
Sbjct: 170 LNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGV 229
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHC---YFRLGMPDE 179
D ++ LM ++R+ L + + IE PD Y++ + L M +
Sbjct: 230 DGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANS 289
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
R K+ L PS TY +I K G + +A+ + + G V+ +LI
Sbjct: 290 LLREMKEKKLCV---PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLI 346
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
G CK A L + + G PN++TF+ ++ + G +E+ LE +M G T
Sbjct: 347 TGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLT 406
Query: 300 -------------------------FDG---------FAYCTVVAALVKTGRVVEADEIA 325
FD F T+++ L K G+ EA E+
Sbjct: 407 PSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELL 466
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
+M S G+ P++ SYN ++ + RQ +D A + I ++G + YT++I+I G +
Sbjct: 467 SKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN 526
Query: 386 KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
A++ ++HM S N V +++GL K G +A + M
Sbjct: 527 HDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 574
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 37/320 (11%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVL-PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAG 121
I +CK Q KA +L + ++ L +++N++ID + + D+ E M G
Sbjct: 555 INGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNG 614
Query: 122 LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
++P+VI+Y SLM+G + L M D+M ++ D+
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI-------------------- 654
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
Y +I+G CK + +A ++F L G P YN+LI+G
Sbjct: 655 ----------------PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISG 698
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
A L + + G + T+TT+++ + G L E+ TEM++ G D
Sbjct: 699 FRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPD 758
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
Y +V L K G+ V+ ++ E+M N V P++ YN +I ++R+G +DEA L D
Sbjct: 759 EIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHD 818
Query: 362 QIEKEGPGNDQYTHTIIIHG 381
++ +G D T I++ G
Sbjct: 819 EMLDKGILPDGATFDILVSG 838
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 188/423 (44%), Gaps = 8/423 (1%)
Query: 79 LIDGVK-LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
L+D K G + FN L++AY + D +++ +M E + P N +S V
Sbjct: 150 LVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALV 209
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
++ ++ +M+ + D + +LM R P EA V + +P +
Sbjct: 210 QRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERG-AEPDS 268
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGF-VPEVLTYNALINGLCKARRANEARRLLS 256
Y++ + CK + A S+ R ++ + VP TY ++I K ++A RL
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
E G N + T+++ + L L + +M +G + + + ++ K G
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHT 376
+ +A E ++M G+ P + +T+I + + + +EAL+L D+ + G N +
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLAN-VFVCN 447
Query: 377 IIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR 436
I+ LCK + +EA + L M S G G N+V+ N V+ G + ++D A F + +
Sbjct: 448 TILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK 507
Query: 437 ----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
+++TY+IL+ R A + + +V + +I+GL G ++A
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKA 567
Query: 493 KKV 495
+++
Sbjct: 568 REL 570
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 1/262 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I K ++D A + G+ P+V+T+ +L++ C+ D E+ + MK
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G+ D+ +Y +L+ G ++ +F +++E + P YN L+ + LG
Sbjct: 648 KGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVA 707
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A ++K +L TY +I+GL K+G + A ++ +Q G VP+ + Y ++
Sbjct: 708 ALDLYKKMLKDG-LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
NGL K + + ++ E ++ PN + + V+ +R G L++ + EM KG
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
Query: 300 FDGFAYCTVVAALVKTGRVVEA 321
DG + +V+ V + V A
Sbjct: 827 PDGATFDILVSGQVGNLQPVRA 848
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 190/396 (47%), Gaps = 7/396 (1%)
Query: 66 MCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPD 125
+C +LD A + + GV+P ++T N L++ C+ + ++ M+E G +P+
Sbjct: 131 LCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPN 190
Query: 126 VISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR-VF 184
+SYN+L+ G L++F+ M + IRP+ + NI++H + G+ N+ +
Sbjct: 191 CVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLL 250
Query: 185 KDVLLSAETDP--STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+++L S++ + ++++ KNG V AL +++ + ++ + + YN +I GL
Sbjct: 251 EEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGL 310
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
C + A + + + G P+ T+ T+++ + G+ ++ ++ M++ G D
Sbjct: 311 CSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQ 370
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
+Y ++ L G V A+E M+ + + P++ +N +I Y R G AL +++
Sbjct: 371 ISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNL 430
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
+ G + YT+ +IHG K RL +A + M S + N +L GH
Sbjct: 431 MLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGH 490
Query: 423 IDRALKFFEGMEVR----DSFTYTILVHNLCRARRF 454
+ A + ++ M R D TYT LV LC R
Sbjct: 491 LRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRL 526
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 160/337 (47%), Gaps = 9/337 (2%)
Query: 129 YNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL 188
++S+M +G L + KMI S + P + ++N L++ + G ++A+ + ++ +
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVRE-M 182
Query: 189 LSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLC-KARR 247
P+ +YN +I GLC V AL +F + + G P +T N +++ LC K
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 248 ANEARRLLSEF---REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFA 304
N ++LL E +A + + T +M+ CF+ G + Q LE+ EM K D
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 305 YCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIE 364
Y ++ L +G +V A M+ GV PD+ +YNT+I ++G+ DEA +L ++
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
Query: 365 KEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHID 424
G DQ ++ +II GLC +N A + L M ++ N V+DG G+ G
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422
Query: 425 RALKFFEGMEVR----DSFTYTILVHNLCRARRFLCA 457
AL M + +T L+H + R + A
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDA 459
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 175/415 (42%), Gaps = 14/415 (3%)
Query: 3 LSAAPALHFNAAYPFTHPAILNHENPITSFLTQRITHSKNVTFRIMVK-GRSLSTKFLNI 61
L AA L Y P ++ H + + + R M + G S + N
Sbjct: 137 LDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNT 196
Query: 62 CIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYC-RFVSFDAGCEVLERM--- 117
I +C +DKA + K G+ P+ VT N ++ A C + V + ++LE +
Sbjct: 197 LIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDS 256
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
+A D++ LM + G L ++ +M + + D YN+++ G+
Sbjct: 257 SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIR-----GLC 311
Query: 178 DEANRV----FKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
N V F ++ +P TYN +I+ LCK G A + +Q G P+ +
Sbjct: 312 SSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQI 371
Query: 234 TYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
+Y +I GLC N A L ++ P + + V++ R G L +L M
Sbjct: 372 SYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLM 431
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
S G + + ++ VK GR+++A + +M S + PD +YN ++ G +
Sbjct: 432 LSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHL 491
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLV 408
A +L D++ + G D T+T ++ GLC RL +A L + + G + V
Sbjct: 492 RLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHV 546
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 121/269 (44%), Gaps = 10/269 (3%)
Query: 190 SAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRAN 249
S + D + ++ ++ LC G + AL + + + G +P ++T+N L+NGLCKA
Sbjct: 114 SFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIE 173
Query: 250 EARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVV 309
+A L+ E RE G PN +++ T++ +++ L + M G + +V
Sbjct: 174 KADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIV 233
Query: 310 AALVKTGRVVE-----ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIE 364
AL + G + +EI + +N D+ ++ F+ G V +ALE+ ++
Sbjct: 234 HALCQKGVIGNNNKKLLEEILDSSQANA-PLDIVICTILMDSCFKNGNVVQALEVWKEMS 292
Query: 365 KEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHID 424
++ D + +II GLC + + A + M G ++ N ++ L K G D
Sbjct: 293 QKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFD 352
Query: 425 RALKFFEGME----VRDSFTYTILVHNLC 449
A M+ D +Y +++ LC
Sbjct: 353 EACDLHGTMQNGGVAPDQISYKVIIQGLC 381
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 108/260 (41%), Gaps = 50/260 (19%)
Query: 283 LEQGLEILTEMR-----SKGYTFDG--FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
L+ L+ L +R +K + +D + +++ L G++ A + ++M+ +GV P
Sbjct: 95 LKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIP 154
Query: 336 DLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHL 395
L ++N ++ + G +++A LV ++ + GP + ++ +I GLC +++A+
Sbjct: 155 GLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLF 214
Query: 396 DHMNSLGFGFNLVASNCV---------------------------------------LDG 416
+ MN G N V N + +D
Sbjct: 215 NTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDS 274
Query: 417 LGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVL 472
K G++ +AL+ ++ M + DS Y +++ LC + + A + ++ G
Sbjct: 275 CFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPD 334
Query: 473 KATRRAVIDGLISDGLKNEA 492
T +I L +G +EA
Sbjct: 335 VFTYNTLISALCKEGKFDEA 354
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 203/460 (44%), Gaps = 24/460 (5%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
RI+ G + I +C+ L++A +L D + G+ P ++T+NT+I+ C
Sbjct: 337 RILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
EV G+ DVI+Y++L+ ++ L + + +E++I D+ N
Sbjct: 397 RVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCN 451
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
IL+ + +G EA+ +++ + + P TATY MI G CK G + AL MF L R
Sbjct: 452 ILLKAFLLMGAYGEADALYR-AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL-R 509
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCG---- 281
+ V + YN +I+ LCK + A +L E E G + T T+++ G
Sbjct: 510 KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKG 569
Query: 282 --RLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
L GLE L G D + L K G A E+ M G+ S
Sbjct: 570 ILGLVYGLEQLNSDVCLGMLNDA------ILLLCKRGSFEAAIEVYMIMRRKGLTVTFPS 623
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
+ L +D L +V+ E D +TIII+GLCK L +A+
Sbjct: 624 -TILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAK 682
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFL 455
S G N + N +++GL + G + AL+ F+ +E V TY IL+ NLC+ FL
Sbjct: 683 SRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFL 742
Query: 456 CASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
A K L + + G +++DG G +A +V
Sbjct: 743 DAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRV 782
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 186/412 (45%), Gaps = 43/412 (10%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVL-PDVVTFNTLIDAYCRFVSFDAGCEVLER----- 116
I+ CK + + A V GVL P++VT+ TL+ A C+ D +++ R
Sbjct: 178 ISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEG 237
Query: 117 ------------------------------MKEAGLTPDVISYNSLMSGAVRKGLFPMTL 146
M E G+ DV+SY+ L+ G ++G L
Sbjct: 238 FEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEAL 297
Query: 147 HMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMING 206
+ KMI+ + P++ +Y ++ ++G +EA +F + LS + Y +I+G
Sbjct: 298 GLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRI-LSVGIEVDEFLYVTLIDG 356
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
+C+ G ++ A SM ++++RG P +LTYN +INGLC A R +EA + G +
Sbjct: 357 ICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGD 411
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
IT++T+++ + ++ LEI D ++ A + G EAD +
Sbjct: 412 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
M + PD A+Y TMI Y + G+++EALE+ +++ K + + II LCK
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV-SAAVCYNRIIDALCKKG 530
Query: 387 RLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS 438
L+ A + L + G ++ S +L + G L G+E +S
Sbjct: 531 MLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNS 582
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 192/429 (44%), Gaps = 20/429 (4%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM--KEAGLTPDVISYNSLMSGAVRKGLFP 143
G P +TF +LI + D EVLE M K D ++++SG + G
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 144 MTLHMFDKMIESEIR-PDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDP---STAT 199
+ L F+ ++S + P++ +Y L+ +LG DE +D++ E +
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEV----RDLVRRLEDEGFEFDCVF 244
Query: 200 YNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR 259
Y+ I+G K G + +AL R + +G +V++Y+ LI+GL K EA LL +
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 260 EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVV 319
+ G EPN IT+T ++ + G+LE+ + + S G D F Y T++ + + G +
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIII 379
A + M G++P + +YNT+I GRV EA D++ K G D T++ ++
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA----DEVSK-GVVGDVITYSTLL 419
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDG---LGKAGHIDRALKFFEGMEVR 436
K + ++ ++ +LV N +L +G G D + M++
Sbjct: 420 DSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 479
Query: 437 -DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
D+ TY ++ C+ + A + + R +ID L G+ + A +V
Sbjct: 480 PDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNR-IIDALCKKGMLDTATEV 538
Query: 496 RLKIRKAQL 504
+++ + L
Sbjct: 539 LIELWEKGL 547
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 158/369 (42%), Gaps = 34/369 (9%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I CK Q+++A + + ++ + V +N +IDA C+ D EVL + E GL
Sbjct: 489 IKGYCKTGQIEEA-LEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGL 547
Query: 123 TPDVISYNSLM----SGAVRKGLFPMT-----------LHMFDKMI-----ESEIRPDVW 162
D+ + +L+ + KG+ + L M + I +
Sbjct: 548 YLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIE 607
Query: 163 SYNILMHCYFRLGMPDEANRVFKDVLLS----------AETDPSTAT---YNVMINGLCK 209
Y I+ + P + D L S ET S+ Y ++INGLCK
Sbjct: 608 VYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCK 667
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
G++ AL++ + RG +TYN+LINGLC+ EA RL G P+ +T
Sbjct: 668 EGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVT 727
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
+ +++ + G ++L M SKG + Y ++V K G+ +A + + M
Sbjct: 728 YGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKM 787
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
V PD + ++MI Y ++G ++EAL + + + + D + +I G C R+
Sbjct: 788 MGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRME 847
Query: 390 EAVQHLDHM 398
EA L M
Sbjct: 848 EARGLLREM 856
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 173/389 (44%), Gaps = 44/389 (11%)
Query: 109 AGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILM 168
+G L+ + ++G +P + S + + R F L + ++ +I + Y+I+
Sbjct: 9 SGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVS 68
Query: 169 HCYFRLGMPDEANR-------------------------------------VFKDVLLSA 191
+ L ++A + + +D L +
Sbjct: 69 WAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNH 128
Query: 192 ETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR--GFVPEVLTYNALINGLCKARRAN 249
PS+ T+ +I + G + NA+ + + + + + +A+I+G CK +
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 250 EARRLLSEFREAG-HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTV 308
A ++G PN +T+TT+++ + G++++ +++ + +G+ FD Y
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 309 VAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGP 368
+ K G +V+A +M+ G+ D+ SY+ +I ++G V+EAL L+ ++ KEG
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 369 GNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALK 428
+ T+T II GLCK +L EA + + S+G + ++DG+ + G+++RA
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 429 FFEGMEVR----DSFTYTILVHNLCRARR 453
ME R TY +++ LC A R
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGR 397
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 189/412 (45%), Gaps = 23/412 (5%)
Query: 23 LNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDG 82
L N I F +Q + N+ RI +S FLN+ + D + + I
Sbjct: 39 LQKFNCILQFYSQLDSKQININHRIY---SIVSWAFLNL-------NRYEDAEKFINIHI 88
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFD---AGCEVLER-MKEAGLTPDVISYNSLMSGAVR 138
K + P ++LI + ++ D G +L ++ G P +++ SL+ V
Sbjct: 89 SKASIFPRTHMLDSLIHGFS--ITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVE 146
Query: 139 KGLFPMTLHMFDKMIESEIR-P-DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPS 196
KG + + + M + P D + + ++ + ++G P+ A F+ + S P+
Sbjct: 147 KGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPN 206
Query: 197 TATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
TY +++ LC+ G V + R L+ GF + + Y+ I+G K +A
Sbjct: 207 LVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDR 266
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
E E G + ++++ +++ + G +E+ L +L +M +G + Y ++ L K G
Sbjct: 267 EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMG 326
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHT 376
++ EA + +++S G+E D Y T+I R+G ++ A ++ +E+ G T+
Sbjct: 327 KLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYN 386
Query: 377 IIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALK 428
+I+GLC A R++EA D + S G +++ + +LD K +ID L+
Sbjct: 387 TVINGLCMAGRVSEA----DEV-SKGVVGDVITYSTLLDSYIKVQNIDAVLE 433
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 169/392 (43%), Gaps = 58/392 (14%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDA------------------- 100
N I ++CK LD A VLI+ + G+ D+ T TL+ +
Sbjct: 520 NRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQ 579
Query: 101 ----------------YCRFVSFDAGCEVLERMKEAGLT---PDVISYNSLMSGAVRKGL 141
C+ SF+A EV M+ GLT P I +L+
Sbjct: 580 LNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTI-LKTLVDNLRSLDA 638
Query: 142 FPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYN 201
+ + ++ + + S DV Y I+++ + G +A + S +T TYN
Sbjct: 639 YLLVVNAGETTLSS---MDVIDYTIIINGLCKEGFLVKALNLCS-FAKSRGVTLNTITYN 694
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
+INGLC+ G + AL +F +L+ G VP +TY LI+ LCK +A +LL
Sbjct: 695 SLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK 754
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
G PN I + ++++ + G+ E + +++ T D F +++ K G + EA
Sbjct: 755 GLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEA 814
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA-------------LELVDQIEKEGP 368
+ + + D + +I + +GR++EA ++L+++++ E
Sbjct: 815 LSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELA 874
Query: 369 GNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNS 400
++ ++ LC+ R+ +A++ LD ++S
Sbjct: 875 ESESIRGFLV--ELCEQGRVPQAIKILDEISS 904
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 23/294 (7%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
+G +L+T N I +C+ L +A + +G++P VT+ LID C+ F
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLD 743
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
++L+ M GL P++I YNS++ G + G + + + + + PD ++ + ++
Sbjct: 744 AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIK 803
Query: 170 CYFRLGMPDEANRV---FKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
Y + G +EA V FKD +SA+ + +I G C G + A R L R
Sbjct: 804 GYCKKGDMEEALSVFTEFKDKNISAD----FFGFLFLIKGFCTKGRMEEA----RGLLRE 855
Query: 227 GFVPEVLTYNALINGLCKARRANEA-RRLLSEFREAGHEPNAI-TFTTVMNCCFRCGR-- 282
V E + LIN + +E+ R L E E G P AI + + + G+
Sbjct: 856 MLVSESVV--KLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYPSGKNL 913
Query: 283 -LEQGLEILT-----EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS 330
Q L+ L E++ K Y D + + V++L +G++ +A+E ++S
Sbjct: 914 GSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEFVMSVLS 967
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 174/351 (49%), Gaps = 9/351 (2%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G+ PD+V +N++I+ Y + F +++ M EAG+ P+ +SY++L+S V F
Sbjct: 255 GITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEA 314
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
L +F +M E D+ + NI++ Y +L M EA+R+F L + +P+ +YN ++
Sbjct: 315 LSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWS-LRKMDIEPNVVSYNTILR 373
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
+ A+ +FR +QR+ V+TYN +I K +A L+ E + G EP
Sbjct: 374 VYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEP 433
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
NAIT++T+++ + G+L++ + ++RS G D Y T++ A + G + A +
Sbjct: 434 NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
++ PD T I + + GR +EA + Q + G D +I+ +
Sbjct: 494 HELKL----PDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRN 549
Query: 386 KRLNEAVQHLDHMNSLGF--GFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
+R ++ + M + G+ N++A VL+ GK ++A + M+
Sbjct: 550 QRYVNVIEVFEKMRTAGYFPDSNVIA--MVLNAYGKQREFEKADTVYREMQ 598
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 196/406 (48%), Gaps = 21/406 (5%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N+ + ++ +AKQ D A + + + + PD T++TLI ++ + FD+ L++M++
Sbjct: 159 NVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQ 218
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
++ D++ Y++L+ + R + + +F ++ S I PD+ +YN +++ Y + + E
Sbjct: 219 DRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFRE 278
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + K+ + A P+T +Y+ +++ +N ALS+F ++ ++ T N +I
Sbjct: 279 ARLLIKE-MNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI 337
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ + EA RL R+ EPN +++ T++ + + + M+ K
Sbjct: 338 DVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIE 397
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ Y T++ KT +A + ++M S G+EP+ +Y+T+I ++ + G++D A L
Sbjct: 398 QNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 457
Query: 360 VDQIEKEGPGNDQYTHTIIIHG------LCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
++ G DQ + +I + AKRL ++ D+ +
Sbjct: 458 FQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDN----------IPRETA 507
Query: 414 LDGLGKAGHIDRAL----KFFEGMEVRDSFTYTILVHNLCRARRFL 455
+ L KAG + A + FE EV+D + +++ R +R++
Sbjct: 508 ITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYV 553
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 109/247 (44%)
Query: 191 AETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANE 250
A+ PS YNV++ + + A +F +++R P+ TY+ LI K +
Sbjct: 149 AKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 208
Query: 251 ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVA 310
A L + + + + ++ ++ R + + I + ++ G T D AY +++
Sbjct: 209 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 268
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
K EA + ++M GV P+ SY+T++ +Y + EAL + ++++
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
D T I+I + + EA + + + N+V+ N +L G+A A+ F
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
Query: 431 EGMEVRD 437
M+ +D
Sbjct: 389 RLMQRKD 395
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 4/192 (2%)
Query: 247 RANEARRLLSEF----REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
R N+ +R L+ EA + P+ + V+ R + + + EMR + D
Sbjct: 131 RENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDR 190
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
+ Y T++ + K G A ++M + V DL Y+ +I L R +A+ + +
Sbjct: 191 YTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSR 250
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
+++ G D + +I+ KAK EA + MN G N V+ + +L +
Sbjct: 251 LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK 310
Query: 423 IDRALKFFEGME 434
AL F M+
Sbjct: 311 FLEALSVFAEMK 322
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 182/409 (44%), Gaps = 6/409 (1%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
R G S ++ +L I+S+CK + + A +L D +K + FN L+ R +
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE------IRP 159
+++ +M E + PDV++ L++ + L +F+KM I+
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKA 368
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
D +N L+ ++G EA + + L P+ TYN +I+G C+ G + A +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
++ P V+T N ++ G+C+ N A + + G + N +T+ T+++ C
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
+E+ + +M G + D Y +++ L + R +A + E++ G DL +
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
YN +I L+ + ++ E++ +EKEG D T+ +I K K + ++ M
Sbjct: 549 YNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNL 448
G + V+D G +D ALK F+ M + +++N+
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 181/379 (47%), Gaps = 3/379 (0%)
Query: 59 LNICIASMCKAKQLDKAECVLID-GVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM 117
N I +CK +L +AE +L+ ++ P+ VT+N LID YCR + EV+ RM
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
KE + P+V++ N+++ G R M + F M + ++ +V +Y L+H +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
++A ++ +L A P Y +I+GLC+ H+A+ + L+ GF ++L YN
Sbjct: 493 EKAMYWYEK-MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LI C + +L++ + G +P++IT+ T+++ + E ++ +MR G
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQM-MSNGVEPDLASYNTMIYLYFRQGRVDEA 356
Y V+ A G + EA ++ + M + + V P+ YN +I + + G +A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 357 LELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDG 416
L L ++++ + + T+ + L + + ++ +D M N + +++
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMER 731
Query: 417 LGKAGHIDRALKFFEGMEV 435
L + + + KF +G V
Sbjct: 732 LSGSDELVKLRKFMQGYSV 750
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 183/406 (45%), Gaps = 16/406 (3%)
Query: 103 RFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVW 162
R ++ + ++ R G++P+ + +S + + +++++ +
Sbjct: 236 RLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAP 295
Query: 163 SYNILMHCYFRLGMPDEANRVFKDVLLSAETD--PSTATYNVMINGLCKNGYVHNALSMF 220
+N L+ C LG + +R+ VL E P T ++IN LCK+ V AL +F
Sbjct: 296 PFNALLSC---LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVF 352
Query: 221 RNLQRR----GFV--PEVLTYNALINGLCKARRANEARRLLSEFR-EAGHEPNAITFTTV 273
++ + G V + + +N LI+GLCK R EA LL + E PNA+T+ +
Sbjct: 353 EKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCL 412
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
++ R G+LE E+++ M+ + T+V + + + A M GV
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
+ ++ +Y T+I+ V++A+ +++ + G D + +I GLC+ +R ++A++
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 394 HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLC 449
++ + GF +L+A N ++ + ++ + ME DS TY L+
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 450 RARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
+ + F + + + G T AVID S G +EA K+
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 118/230 (51%), Gaps = 2/230 (0%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLP-DVVTFNTLIDAYCRF 104
+++ G S K I+ +C+ ++ D +++ +K G D++ +N LI +C
Sbjct: 501 KMLEAGCSPDAKIYYALISGLCQVRR-DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 105 VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY 164
+ + E+L M++ G PD I+YN+L+S + F M ++M E + P V +Y
Sbjct: 560 NNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ 224
++ Y +G DEA ++FKD+ L ++ +P+T YN++IN K G ALS+ ++
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 225 RRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
+ P V TYNAL L + + +L+ E E EPN IT +M
Sbjct: 680 MKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 153/320 (47%), Gaps = 18/320 (5%)
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
L +++ E I V + N+L+ + R+GM +++ V++ + + + ++ NV+++
Sbjct: 137 LRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMK---NSQVRNVVVD 193
Query: 206 GLCKNGYVHNALSMFRN-LQRRG-FVPEVLTYNALINGLCKARRANEAR--RLLSEFREA 261
L +NG V +A + LQ+ F P +T + +++ + K R E + L+S F
Sbjct: 194 VLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSH 253
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
G PN++ T ++ + R +IL+++ + + +++ L + +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQI--EKEGPGN----DQYTH 375
+++ +M + PD+ + +I + RVDEALE+ +++ ++ GN D
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHF 373
Query: 376 TIIIHGLCKAKRLNEAVQHLDHMN-SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM- 433
+I GLCK RL EA + L M N V NC++DG +AG ++ A + M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 434 --EVR-DSFTYTILVHNLCR 450
E++ + T +V +CR
Sbjct: 434 EDEIKPNVVTVNTIVGGMCR 453
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 184/399 (46%), Gaps = 10/399 (2%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
+ + I YC FD G E+L MK G+ PD++++ + + G +
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
K+ I D S + ++ + ++G P+EA ++ L P+ Y+ ++ +C
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR----PNIFVYSSFLSNICS 385
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
G + A ++F+ + G +P+ + Y +I+G C R ++A + ++G+ P+ T
Sbjct: 386 TGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTT 445
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
T ++ C R G + + M+++G D Y ++ KT ++ + E+ ++M
Sbjct: 446 STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
S G+ PD+A+YN +I+ +G +DEA E++ ++ + G T +I G K
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQ 565
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE-----GMEVRDSFTYTIL 444
EA +M L ++V + +L G KA +++A+ F G++ D Y L
Sbjct: 566 EAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK-PDVVLYNTL 624
Query: 445 VHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGL 483
+H C A + + +Q G ++T A++ GL
Sbjct: 625 IHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 173/388 (44%), Gaps = 33/388 (8%)
Query: 47 IMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVS 106
++ +GR L+ L++ I C DK +L+ G+ PD+V F ID C+
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 107 FDAGCEVLERMKEAGLT--------------------------------PDVISYNSLMS 134
VL ++K G++ P++ Y+S +S
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLS 381
Query: 135 GAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD 194
G +F ++ E + PD Y ++ Y LG D+A + F LL +
Sbjct: 382 NICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF-GALLKSGNP 440
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
PS T ++I + G + +A S+FRN++ G +V+TYN L++G K + N+ L
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
Query: 255 LSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK 314
+ E R AG P+ T+ +++ G +++ EI++E+ +G+ A+ V+ K
Sbjct: 501 IDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSK 560
Query: 315 TGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYT 374
G EA + M ++PD+ + + +++ Y + R+++A+ L +++ G D
Sbjct: 561 RGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVL 620
Query: 375 HTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
+ +IHG C + +A + + M G
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRG 648
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 137/284 (48%), Gaps = 5/284 (1%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
++++C + +A + + +LG+LPD V + T+ID YC D + + ++G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P + + L+ R G +F M ++ DV +YN LMH Y G + N+
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY---GKTHQLNK 496
Query: 183 VFK--DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
VF+ D + SA P ATYN++I+ + GY+ A + L RRGFVP L + +I
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
G K EA L + +P+ +T + +++ + R+E+ + + ++ G
Sbjct: 557 GFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
D Y T++ G + +A E+ M+ G+ P+ ++++ ++
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 130/274 (47%), Gaps = 7/274 (2%)
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
E R F + +LS + A ++ I C +GY + ++ G P+++ +
Sbjct: 253 ELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVF 312
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I+ LCKA EA +L + + G ++++ ++V++ + G+ E+ ++++ R +
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRP- 371
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
+ F Y + ++ + TG ++ A I +++ G+ PD Y TMI Y GR D+A +
Sbjct: 372 --NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
+ K G T TI+I + +++A +M + G ++V N ++ G G
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 419 KAGHIDRALKFFEGMEVR----DSFTYTILVHNL 448
K +++ + + M D TY IL+H++
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 4/224 (1%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT 96
I+ +++V + +G L N + K QL+K ++ + G+ PDV T+N
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
LI + D E++ + G P +++ ++ G ++G F ++ M +
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
++PDV + + L+H Y + ++A +F LL A P YN +I+G C G + A
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNK-LLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANE---ARRLLSE 257
+ + +RG +P T++AL+ GL R N A LL E
Sbjct: 638 CELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEE 681
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 3/226 (1%)
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYC-TVVAALVKTGRVVEADEIAEQ 327
F+ +++CC R ++ L++ ++ G F C +++ +++ + A E E
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFG-IFPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M+S G + A + I Y G D+ EL+ ++ G D T+ I LCKA
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS-FTYTILVH 446
L EA L + G + V+ + V+DG K G + A+K +R + F Y+ +
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLS 381
Query: 447 NLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
N+C L AS + G +IDG + G ++A
Sbjct: 382 NICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 97/236 (41%), Gaps = 3/236 (1%)
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
++++I+ + V+ AL + + + G P +L+ + + AR +
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 258 FREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGR 317
G NA + + G ++G E+L M+ G D A+ + L K G
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 318 VVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI 377
+ EA + ++ G+ D S +++I + + G+ +EA++L+ + + ++
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSS 378
Query: 378 IIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
+ +C + A + LG + V ++DG G D+A ++F +
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 184/399 (46%), Gaps = 10/399 (2%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
+ + I YC FD G E+L MK G+ PD++++ + + G +
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
K+ I D S + ++ + ++G P+EA ++ L P+ Y+ ++ +C
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR----PNIFVYSSFLSNICS 385
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
G + A ++F+ + G +P+ + Y +I+G C R ++A + ++G+ P+ T
Sbjct: 386 TGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTT 445
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
T ++ C R G + + M+++G D Y ++ KT ++ + E+ ++M
Sbjct: 446 STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
S G+ PD+A+YN +I+ +G +DEA E++ ++ + G T +I G K
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQ 565
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE-----GMEVRDSFTYTIL 444
EA +M L ++V + +L G KA +++A+ F G++ D Y L
Sbjct: 566 EAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK-PDVVLYNTL 624
Query: 445 VHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGL 483
+H C A + + +Q G ++T A++ GL
Sbjct: 625 IHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 173/388 (44%), Gaps = 33/388 (8%)
Query: 47 IMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVS 106
++ +GR L+ L++ I C DK +L+ G+ PD+V F ID C+
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 107 FDAGCEVLERMKEAGLT--------------------------------PDVISYNSLMS 134
VL ++K G++ P++ Y+S +S
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLS 381
Query: 135 GAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD 194
G +F ++ E + PD Y ++ Y LG D+A + F LL +
Sbjct: 382 NICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF-GALLKSGNP 440
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
PS T ++I + G + +A S+FRN++ G +V+TYN L++G K + N+ L
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
Query: 255 LSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK 314
+ E R AG P+ T+ +++ G +++ EI++E+ +G+ A+ V+ K
Sbjct: 501 IDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSK 560
Query: 315 TGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYT 374
G EA + M ++PD+ + + +++ Y + R+++A+ L +++ G D
Sbjct: 561 RGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVL 620
Query: 375 HTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
+ +IHG C + +A + + M G
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRG 648
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 137/284 (48%), Gaps = 5/284 (1%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
++++C + +A + + +LG+LPD V + T+ID YC D + + ++G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P + + L+ R G +F M ++ DV +YN LMH Y G + N+
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY---GKTHQLNK 496
Query: 183 VFK--DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
VF+ D + SA P ATYN++I+ + GY+ A + L RRGFVP L + +I
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
G K EA L + +P+ +T + +++ + R+E+ + + ++ G
Sbjct: 557 GFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
D Y T++ G + +A E+ M+ G+ P+ ++++ ++
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 130/274 (47%), Gaps = 7/274 (2%)
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
E R F + +LS + A ++ I C +GY + ++ G P+++ +
Sbjct: 253 ELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVF 312
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I+ LCKA EA +L + + G ++++ ++V++ + G+ E+ ++++ R +
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRP- 371
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
+ F Y + ++ + TG ++ A I +++ G+ PD Y TMI Y GR D+A +
Sbjct: 372 --NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
+ K G T TI+I + +++A +M + G ++V N ++ G G
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 419 KAGHIDRALKFFEGMEVR----DSFTYTILVHNL 448
K +++ + + M D TY IL+H++
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 4/224 (1%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT 96
I+ +++V + +G L N + K QL+K ++ + G+ PDV T+N
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
LI + D E++ + G P +++ ++ G ++G F ++ M +
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
++PDV + + L+H Y + ++A +F LL A P YN +I+G C G + A
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNK-LLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANE---ARRLLSE 257
+ + +RG +P T++AL+ GL R N A LL E
Sbjct: 638 CELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEE 681
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 3/226 (1%)
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYC-TVVAALVKTGRVVEADEIAEQ 327
F+ +++CC R ++ L++ ++ G F C +++ +++ + A E E
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFG-IFPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M+S G + A + I Y G D+ EL+ ++ G D T+ I LCKA
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS-FTYTILVH 446
L EA L + G + V+ + V+DG K G + A+K +R + F Y+ +
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLS 381
Query: 447 NLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
N+C L AS + G +IDG + G ++A
Sbjct: 382 NICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 97/236 (41%), Gaps = 3/236 (1%)
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
++++I+ + V+ AL + + + G P +L+ + + AR +
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 258 FREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGR 317
G NA + + G ++G E+L M+ G D A+ + L K G
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 318 VVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI 377
+ EA + ++ G+ D S +++I + + G+ +EA++L+ + + ++
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSS 378
Query: 378 IIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
+ +C + A + LG + V ++DG G D+A ++F +
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 203/446 (45%), Gaps = 15/446 (3%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I + + +L+ A C+L+D + GV D F LI++Y + ++ ++MK+ G+
Sbjct: 157 IKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGV 216
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
+ SYNSL +R+G + M F+KM+ + P +YN+++ +F + A R
Sbjct: 217 ERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALR 276
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
F+D + + P AT+N MING C+ + A +F ++ P V++Y +I G
Sbjct: 277 FFED-MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGY 335
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT-FD 301
R ++ R+ E R +G EPNA T++T++ G++ + IL M +K D
Sbjct: 336 LAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKD 395
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
+ ++ + K G + A E+ + M + V + Y +I + + A++L+D
Sbjct: 396 NSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLD 455
Query: 362 Q-IEKEGPGNDQYT-------HTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
IEKE Q T + II LC + +A + G + A N +
Sbjct: 456 TLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNL 514
Query: 414 LDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGF 469
+ G K G+ D + + + M R+S Y +L+ + A L + ++ G
Sbjct: 515 IRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGH 574
Query: 470 QVLKATRRAVIDGLISDGLKNEAKKV 495
+ R+VI+ L DG A +V
Sbjct: 575 VPDSSLFRSVIESLFEDGRVQTASRV 600
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 201/489 (41%), Gaps = 24/489 (4%)
Query: 32 FLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLID--GVKLGVLP 89
FL+ R+ + + +G S N I C+ K++D+AE + ++ G K+G P
Sbjct: 266 FLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIG--P 323
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
VV++ T+I Y D G + E M+ +G+ P+ +Y++L+ G G ++
Sbjct: 324 SVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNIL 383
Query: 150 DKMIESEIRP-DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
M+ I P D + L+ + G A V K + + Y V+I C
Sbjct: 384 KNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLK-AMATLNVPAEAGHYGVLIENQC 442
Query: 209 KNGYVHNALSMFRNLQRRGFV--------PEVLTYNALINGLCKARRANEARRLLSEFRE 260
K + A+ + L + + E YN +I LC + +A L + +
Sbjct: 443 KASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMK 502
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVE 320
G + + ++ + G + EIL M +G + AY ++ + + G +
Sbjct: 503 RGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGD 561
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI--I 378
A + M+ +G PD + + ++I F GRV A ++ + + G + I I
Sbjct: 562 AKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKI 621
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE-GMEVRD 437
+ L + EA+ +D +N G +L + +L L + G ALK + G+E
Sbjct: 622 LEALLMRGHVEEALGRIDLLNQNGHTADL---DSLLSVLSEKGKTIAALKLLDFGLERDL 678
Query: 438 SF---TYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKK 494
S +Y ++ L A + L A L ++ G + +I L +G +A
Sbjct: 679 SLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQADV 738
Query: 495 VRLKIRKAQ 503
+ I+K Q
Sbjct: 739 LSRMIKKGQ 747
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 9/263 (3%)
Query: 200 YNVMINGLCKNGYVHNALSMFRNLQRRGFVP-EVLTYNALINGLCKARRANEARRLLSEF 258
YNV+ +G K + +AL FR +R G + + T+ +I L + + N AR +L +
Sbjct: 121 YNVL-HGAKK---LEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDM 176
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
E G + F ++ + G +++ ++I +M+ G +Y ++ +++ GR
Sbjct: 177 PEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRY 236
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
+ A +M+S GVEP +YN M++ +F R++ AL + ++ G D T +
Sbjct: 237 MMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTM 296
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR-- 436
I+G C+ K+++EA + M G ++V+ ++ G +D L+ FE M
Sbjct: 297 INGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGI 356
Query: 437 --DSFTYTILVHNLCRARRFLCA 457
++ TY+ L+ LC A + + A
Sbjct: 357 EPNATTYSTLLPGLCDAGKMVEA 379
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 104/235 (44%)
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
T+ MI L + +++A + ++ +G + + LI KA E+ ++ +
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
++ G E ++ ++ R GR +M S+G Y ++ + R+
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRL 271
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
A E M + G+ PD A++NTMI + R ++DEA +L +++ G ++T +
Sbjct: 272 ETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTM 331
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
I G R+++ ++ + M S G N + +L GL AG + A + M
Sbjct: 332 IKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 182/409 (44%), Gaps = 6/409 (1%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
R G S ++ +L I+S+CK + + A +L D +K + FN L+ R +
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE------IRP 159
+++ +M E + PDV++ L++ + L +F++M I+
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
D +N L+ ++G EA + + L P+ TYN +I+G C+ G + A +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
++ P V+T N ++ G+C+ N A + + G + N +T+ T+++ C
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
+E+ + +M G + D Y +++ L + R +A + E++ G DL +
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
YN +I L+ + ++ E++ +EKEG D T+ +I K K + ++ M
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNL 448
G + V+D G +D ALK F+ M + +++N+
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 170/346 (49%), Gaps = 10/346 (2%)
Query: 59 LNICIASMCKAKQLDKAECVLID-GVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM 117
N I +CK +L +AE +L+ ++ +P+ VT+N LID YCR + EV+ RM
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
KE + P+V++ N+++ G R M + F M + ++ +V +Y L+H +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
++A ++ +L A P Y +I+GLC+ H+A+ + L+ GF ++L YN
Sbjct: 493 EKAMYWYEK-MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LI C A + +L++ + G +P++IT+ T+++ + E ++ +MR G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQM-MSNGVEPDLASYNTMIYLYFRQGRVDEA 356
Y V+ A G + EA ++ + M + + V P+ YN +I + + G +A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 357 LELVDQIEKEGPGNDQYTHTIII-------HGLCKAKRLNEAVQHL 395
L L ++++ + + T+ + G K ++E V+HL
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHL 717
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 172/420 (40%), Gaps = 45/420 (10%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
GV P+ V I + C+ + ++L + + + +N+L+S R
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD-----PSTATY 200
+ KM E +IRPDV + IL++ + DEA VF+ + D + +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 201 NVMINGLCKNGYVHNALSMFRNLQ-RRGFVPEVLTYNALINGLCKARRANEARRLLSEFR 259
N +I+GLCK G + A + ++ VP +TYN LI+G C+A + A+ ++S +
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 260 EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVV 319
E +PN +T T++ R L + +M +G + Y T++ A V
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIII 379
+A E+M+ G PD Y +I
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALI----------------------------------- 518
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR--- 436
GLC+ +R ++A++ ++ + GF +L+A N ++ + ++ + ME
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 437 -DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
DS TY L+ + + F + + + G T AVID S G +EA K+
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 2/216 (0%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLP-DVVTFNTLIDAYCRF 104
+++ G S K I+ +C+ ++ D +++ +K G D++ +N LI +C
Sbjct: 501 KMLEAGCSPDAKIYYALISGLCQVRR-DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 105 VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY 164
+ + E+L M++ G PD I+YN+L+S + F M ++M E + P V +Y
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ 224
++ Y +G DEA ++FKD+ L ++ +P+T YN++IN K G ALS+ ++
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 225 RRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
+ P V TYNAL L + + +L+ E E
Sbjct: 680 MKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 152/320 (47%), Gaps = 18/320 (5%)
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
L +++ E I + + +L+ + R+GM +++ V++ + + + ++ NV+++
Sbjct: 137 LRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMK---NSQVRNVVVD 193
Query: 206 GLCKNGYVHNALSMFRN-LQRRG-FVPEVLTYNALINGLCKARRANEAR--RLLSEFREA 261
L +NG V +A + LQ+ F P +T + +++ + K R E + L+S F
Sbjct: 194 VLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSH 253
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
G PN++ T ++ + R +IL+++ + + +++ L + +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQI--EKEGPGN----DQYTH 375
+++ +M + PD+ + +I + RVDEALE+ +Q+ ++ GN D
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 376 TIIIHGLCKAKRLNEAVQHLDHMNSLGFGF-NLVASNCVLDGLGKAGHIDRALKFFEGM- 433
+I GLCK RL EA + L M N V NC++DG +AG ++ A + M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 434 --EVR-DSFTYTILVHNLCR 450
E++ + T +V +CR
Sbjct: 434 EDEIKPNVVTVNTIVGGMCR 453
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 182/409 (44%), Gaps = 6/409 (1%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
R G S ++ +L I+S+CK + + A +L D +K + FN L+ R +
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE------IRP 159
+++ +M E + PDV++ L++ + L +F++M I+
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
D +N L+ ++G EA + + L P+ TYN +I+G C+ G + A +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
++ P V+T N ++ G+C+ N A + + G + N +T+ T+++ C
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
+E+ + +M G + D Y +++ L + R +A + E++ G DL +
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
YN +I L+ + ++ E++ +EKEG D T+ +I K K + ++ M
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNL 448
G + V+D G +D ALK F+ M + +++N+
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 183/379 (48%), Gaps = 3/379 (0%)
Query: 59 LNICIASMCKAKQLDKAECVLID-GVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM 117
N I +CK +L +AE +L+ ++ +P+ VT+N LID YCR + EV+ RM
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
KE + P+V++ N+++ G R M + F M + ++ +V +Y L+H +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
++A ++ +L A P Y +I+GLC+ H+A+ + L+ GF ++L YN
Sbjct: 493 EKAMYWYEK-MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LI C A + +L++ + G +P++IT+ T+++ + E ++ +MR G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQM-MSNGVEPDLASYNTMIYLYFRQGRVDEA 356
Y V+ A G + EA ++ + M + + V P+ YN +I + + G +A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 357 LELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDG 416
L L ++++ + + T+ + L + + ++ +D M N + +++
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMER 731
Query: 417 LGKAGHIDRALKFFEGMEV 435
L + + + KF +G V
Sbjct: 732 LSGSDELVKLRKFMQGYSV 750
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 172/420 (40%), Gaps = 45/420 (10%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
GV P+ V I + C+ + ++L + + + +N+L+S R
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD-----PSTATY 200
+ KM E +IRPDV + IL++ + DEA VF+ + D + +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 201 NVMINGLCKNGYVHNALSMFRNLQ-RRGFVPEVLTYNALINGLCKARRANEARRLLSEFR 259
N +I+GLCK G + A + ++ VP +TYN LI+G C+A + A+ ++S +
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 260 EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVV 319
E +PN +T T++ R L + +M +G + Y T++ A V
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIII 379
+A E+M+ G PD Y +I
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALI----------------------------------- 518
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR--- 436
GLC+ +R ++A++ ++ + GF +L+A N ++ + ++ + ME
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 437 -DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
DS TY L+ + + F + + + G T AVID S G +EA K+
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 118/230 (51%), Gaps = 2/230 (0%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLP-DVVTFNTLIDAYCRF 104
+++ G S K I+ +C+ ++ D +++ +K G D++ +N LI +C
Sbjct: 501 KMLEAGCSPDAKIYYALISGLCQVRR-DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 105 VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY 164
+ + E+L M++ G PD I+YN+L+S + F M ++M E + P V +Y
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ 224
++ Y +G DEA ++FKD+ L ++ +P+T YN++IN K G ALS+ ++
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 225 RRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
+ P V TYNAL L + + +L+ E E EPN IT +M
Sbjct: 680 MKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 152/320 (47%), Gaps = 18/320 (5%)
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
L +++ E I + + +L+ + R+GM +++ V++ + + + ++ NV+++
Sbjct: 137 LRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMK---NSQVRNVVVD 193
Query: 206 GLCKNGYVHNALSMFRN-LQRRG-FVPEVLTYNALINGLCKARRANEAR--RLLSEFREA 261
L +NG V +A + LQ+ F P +T + +++ + K R E + L+S F
Sbjct: 194 VLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSH 253
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
G PN++ T ++ + R +IL+++ + + +++ L + +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQI--EKEGPGN----DQYTH 375
+++ +M + PD+ + +I + RVDEALE+ +Q+ ++ GN D
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 376 TIIIHGLCKAKRLNEAVQHLDHMNSLGFGF-NLVASNCVLDGLGKAGHIDRALKFFEGM- 433
+I GLCK RL EA + L M N V NC++DG +AG ++ A + M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 434 --EVR-DSFTYTILVHNLCR 450
E++ + T +V +CR
Sbjct: 434 EDEIKPNVVTVNTIVGGMCR 453
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 181/382 (47%), Gaps = 8/382 (2%)
Query: 18 THPAILNHENPITSFLTQ-----RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQL 72
++P I EN L R S + RI G S + LN + + + ++
Sbjct: 112 SYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF 171
Query: 73 DKAECVLIDGVK-LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNS 131
D + + + G+ P++ T N L+ A C+ ++ +VL+ + GL P++++Y +
Sbjct: 172 DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTT 231
Query: 132 LMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSA 191
++ G V +G + ++M++ PD +Y +LM Y +LG EA V D +
Sbjct: 232 ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDD-MEKN 290
Query: 192 ETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEA 251
E +P+ TY VMI LCK A +MF + R F+P+ +I+ LC+ + +EA
Sbjct: 291 EIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEA 350
Query: 252 RRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAA 311
L + + P+ +T+++ + GR+ + ++ E KG Y T++A
Sbjct: 351 CGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAG 409
Query: 312 LVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGND 371
+ + G + EA + + M +P+ +YN +I + G V E + +++++ + G +
Sbjct: 410 MCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPN 469
Query: 372 QYTHTIIIHGLCKAKRLNEAVQ 393
+ T I+ GL K + +A++
Sbjct: 470 KTTFLILFEGLQKLGKEEDAMK 491
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 150/301 (49%), Gaps = 2/301 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N+ + ++CK ++ A VL + +G++P++VT+ T++ Y ++ VLE M +
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD 254
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G PD +Y LM G + G F + D M ++EI P+ +Y +++ + E
Sbjct: 255 RGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE 314
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A +F D +L P ++ +I+ LC++ V A ++R + + +P+ + LI
Sbjct: 315 ARNMF-DEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 373
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ LCK R EAR+L EF E G P+ +T+ T++ G L + + +M +
Sbjct: 374 HWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCK 432
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ F Y ++ L K G V E + E+M+ G P+ ++ + + G+ ++A+++
Sbjct: 433 PNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492
Query: 360 V 360
V
Sbjct: 493 V 493
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 163/360 (45%), Gaps = 5/360 (1%)
Query: 140 GLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTAT 199
G + ++ +F ++ + ++ V S N L++ + D + +FK+ S P+ T
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 193
Query: 200 YNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR 259
N+++ LCK + +A + + G VP ++TY ++ G A+R+L E
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253
Query: 260 EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVV 319
+ G P+A T+T +M+ + GR + ++ +M + Y ++ AL K +
Sbjct: 254 DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIII 379
EA + ++M+ PD + +I +VDEA L ++ K D + +I
Sbjct: 314 EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 373
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR--- 436
H LCK R+ EA + D G +L+ N ++ G+ + G + A + ++ M R
Sbjct: 374 HWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCK 432
Query: 437 -DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
++FTY +L+ L + + L L+ G K T + +GL G + +A K+
Sbjct: 433 PNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 114/278 (41%), Gaps = 17/278 (6%)
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP---NAITFTTVMNCCFRCGRL 283
GF TY++++ L +AR + L+++ R + + P F ++ GR
Sbjct: 78 GFTHNYDTYHSILFKLSRARAFDPVESLMADLRNS-YPPIKCGENLFIDLLRNYGLAGRY 136
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN-----GVEPDLA 338
E + I + G + T++ L++ R ++ M N G+ P++
Sbjct: 137 ESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF----DLVHAMFKNSKESFGITPNIF 192
Query: 339 SYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM 398
+ N ++ ++ ++ A +++D+I G + T+T I+ G + A + L+ M
Sbjct: 193 TCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 252
Query: 399 NSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD----SFTYTILVHNLCRARRF 454
G+ + ++DG K G A + ME + TY +++ LC+ ++
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 455 LCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
A L+ F + VID L D +EA
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEA 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 72/154 (46%), Gaps = 2/154 (1%)
Query: 45 FRIMVKGRSL-STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
+R M+K + L+ I +CK ++ +A L D + G +P ++T+NTLI C
Sbjct: 354 WRKMLKNNCMPDNALLSTLIHWLCKEGRVTEAR-KLFDEFEKGSIPSLLTYNTLIAGMCE 412
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
+ + M E P+ +YN L+ G + G + + ++M+E P+ +
Sbjct: 413 KGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTT 472
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
+ IL +LG ++A ++ +++ + D +
Sbjct: 473 FLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKES 506
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 176/397 (44%), Gaps = 33/397 (8%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
+G +S LN + + ++D+ V + LG + +V TFN +I ++C+
Sbjct: 177 EGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFE 236
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
V RM + G+ P+V+S+N ++ GA + G L + KM
Sbjct: 237 ALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKM----------------- 279
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
GM N V P+ TYN +ING CK G + A + ++ + G
Sbjct: 280 -----GMMS-GNFV----------SPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
TY AL++ +A ++EA RL E G N + + +++ F G +E + +
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSV 383
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
L +M SK D F VV L + G V EA E Q+ + D+ +NT+++ + R
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
++ A +++ + +G D + +I G K +L A++ D M + NLV
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVI 503
Query: 410 SNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVH 446
N +++GL K G A ME++D TY L++
Sbjct: 504 YNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLN 540
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 165/374 (44%), Gaps = 45/374 (12%)
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
G +PDV ++SL+ + G + ++ V + N M C + D
Sbjct: 145 GSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
+V+K+ + S + T+N++I CK + ALS+F + + G P V+++N +I+
Sbjct: 203 WKVYKE-MDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMID 261
Query: 241 GLCKARRANEARRLLSEF-REAGH--EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
G CK A +LL + +G+ PNA+T+ +V+N + GRL+ I +M G
Sbjct: 262 GACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSG 321
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
+ Y +V A + G EA + ++M S G+ + YN+++Y F +G ++ A+
Sbjct: 322 VDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAM 381
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
++ + + D++T I++ GLC
Sbjct: 382 SVLRDMNSKNMQIDRFTQAIVVRGLC---------------------------------- 407
Query: 418 GKAGHIDRALKF----FEGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLK 473
+ G++ A++F E V D + L+H+ R ++ CA + L + L G +
Sbjct: 408 -RNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDA 466
Query: 474 ATRRAVIDGLISDG 487
+ +IDG + +G
Sbjct: 467 ISFGTLIDGYLKEG 480
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 151/345 (43%), Gaps = 42/345 (12%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I CKA +LD AE + D VK GV + T+ L+DAY R S D + + M
Sbjct: 295 NSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTS 354
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GL + + YNS +++ F G +
Sbjct: 355 KGLVVNTVIYNS-----------------------------------IVYWLFMEGDIEG 379
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A V +D + S T +++ GLC+NGYV A+ R + + V +++ +N L+
Sbjct: 380 AMSVLRD-MNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLM 438
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ + ++ A ++L G +AI+F T+++ + G+LE+ LEI M T
Sbjct: 439 HHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKT 498
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ Y ++V L K G A+ + M D+ +YNT++ + G V+EA ++
Sbjct: 499 SNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI----KDIVTYNTLLNESLKTGNVEEADDI 554
Query: 360 VDQIEKEG--PGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
+ +++K+ T I+I+ LCK +A + L M G
Sbjct: 555 LSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERG 599
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 172/430 (40%), Gaps = 107/430 (24%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N+ I S CK +L +A V +K GV P+VV+FN +ID C+ ++L +M
Sbjct: 221 FNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMG 280
Query: 119 EAG---LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
++P+ ++YNS+++G + G + + M++S + + +Y L+ Y R G
Sbjct: 281 MMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAG 340
Query: 176 MPDEANRVFKDVLLSAETDPSTATYN---------------------------------- 201
DEA R+ D + S +T YN
Sbjct: 341 SSDEALRLC-DEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQ 399
Query: 202 -VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
+++ GLC+NGYV A+ R + + V +++ +N L++ + ++ A ++L
Sbjct: 400 AIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLV 459
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAAL-------- 312
G +AI+F T+++ + G+LE+ LEI M T + Y ++V L
Sbjct: 460 QGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGA 519
Query: 313 -----------------------VKTGRVVEADEIAEQM--------------------- 328
+KTG V EAD+I +M
Sbjct: 520 AEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHL 579
Query: 329 ----------------MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ 372
+ GV PD +Y T+I + + ++ +EL D + +G +
Sbjct: 580 CKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHE 639
Query: 373 YTHTIIIHGL 382
+ + I+ L
Sbjct: 640 HIYLSIVRPL 649
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 7/229 (3%)
Query: 87 VLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTL 146
++ D+V NTL+ + R ++L M GL+ D IS+ +L+ G +++G L
Sbjct: 427 LVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERAL 486
Query: 147 HMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMING 206
++D MI+ ++ YN +++ + GM A + +++A TYN ++N
Sbjct: 487 EIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA-----EAVVNAMEIKDIVTYNTLLNE 541
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEV--LTYNALINGLCKARRANEARRLLSEFREAGHE 264
K G V A + +Q++ V +T+N +IN LCK +A+ +L E G
Sbjct: 542 SLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVV 601
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
P++IT+ T++ + E+ +E+ + +G T Y ++V L+
Sbjct: 602 PDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLL 650
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 11/301 (3%)
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
+H + R+ Q G P+V +++L+ + A A ++ + R G +
Sbjct: 131 LHVLSGLIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNN 188
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
M C +++ ++ EM S GY + + V+ + K ++ EA + +M+ G
Sbjct: 189 FMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCG 248
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN----DQYTHTIIIHGLCKAKRL 388
V P++ S+N MI + G + AL+L+ ++ GN + T+ +I+G CKA RL
Sbjct: 249 VWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMM-SGNFVSPNAVTYNSVINGFCKAGRL 307
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTIL 444
+ A + M G N ++D G+AG D AL+ + M V ++ Y +
Sbjct: 308 DLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSI 367
Query: 445 VHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQL 504
V+ L A L Q+ + T+ V+ GL +G EA + + +I + +L
Sbjct: 368 VYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKL 427
Query: 505 L 505
+
Sbjct: 428 V 428
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 158/333 (47%), Gaps = 6/333 (1%)
Query: 125 DVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVF 184
D S++ + A R L P + +M I P ++ I+ Y G PD+A ++F
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 185 KDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCK 244
+ + A++N +++ LCK+ V A +FR L+ R F + +TYN ++NG C
Sbjct: 150 LN-MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCL 207
Query: 245 ARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFA 304
+R +A +L E E G PN T+ T++ FR G++ E EM+ + D
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 305 YCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIE 364
Y TVV G + A + ++M+ GV P +A+YN MI + ++ V+ A+ + +++
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 365 KEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHID 424
+ G + T+ ++I GL A + + + M + G N N ++ + ++
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 387
Query: 425 RALKFFEGMEVRDSF----TYTILVHNLCRARR 453
+AL FE M D TY IL+ + +R
Sbjct: 388 KALGLFEKMGSGDCLPNLDTYNILISGMFVRKR 420
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 149/321 (46%), Gaps = 6/321 (1%)
Query: 39 HSKNVTFRIMVKGRSL----STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTF 94
H + ++ + RSL S K I A + DKA + ++ + G D+ +F
Sbjct: 105 HLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASF 164
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
NT++D C+ + E+ ++ + D ++YN +++G P L + +M+E
Sbjct: 165 NTILDVLCKSKRVEKAYELFRALR-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVE 223
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVH 214
I P++ +YN ++ +FR G A F + + + + TY +++G G +
Sbjct: 224 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE-MKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
A ++F + R G +P V TYNA+I LCK A + E G+EPN T+ ++
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 275 NCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
F G +G E++ M ++G + Y ++ + V +A + E+M S
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Query: 335 PDLASYNTMIYLYFRQGRVDE 355
P+L +YN +I F + R ++
Sbjct: 403 PNLDTYNILISGMFVRKRSED 423
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT 96
I ++NV ++ +G S N I +CK ++ A + + V+ G P+V T+N
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
LI F G E+++RM+ G P+ +YN ++ L +F+KM +
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 157 IRPDVWSYNILMHCYF 172
P++ +YNIL+ F
Sbjct: 401 CLPNLDTYNILISGMF 416
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 194/402 (48%), Gaps = 37/402 (9%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
FN+LI +Y F ++ + MK+ G++P V+++NSL+S +++G M +FD+M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 154 ESE-IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
+ + PD +++N L++ + + M DEA R+FKD+ L +P TYN +I+GLC+ G
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMEL-YHCNPDVVTYNTIIDGLCRAGK 259
Query: 213 V---HNALSMFRNLQRRGFV-PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
V HN LS L++ V P V++Y L+ G C + +EA + + G +PNA+
Sbjct: 260 VKIAHNVLSGM--LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAV 317
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF--DGFAYCTVVAALVKTGRVVEADEIAE 326
T+ T++ R ++ +IL TF D + ++ A G + A ++ +
Sbjct: 318 TYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQ 377
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQI-EKEGPGNDQYTHTIIIHGLCKA 385
+M++ + PD ASY+ +I + D A L +++ EKE ++ G +
Sbjct: 378 EMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKE-----------VLLGKDEC 426
Query: 386 KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILV 445
K L A + F + +N GK ++ + V+D +Y L+
Sbjct: 427 KPLAAAYNPM---------FEYLCAN------GKTKQAEKVFRQLMKRGVQDPPSYKTLI 471
Query: 446 HNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
CR +F A + LV L+ F T +IDGL+ G
Sbjct: 472 TGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIG 513
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 168/379 (44%), Gaps = 12/379 (3%)
Query: 54 LSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEV 113
L ++ N I S A ++ + ++G+ P V+TFN+L+ + ++
Sbjct: 136 LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDL 195
Query: 114 LERMKEA-GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYF 172
+ M+ G+TPD ++N+L++G + + +F M PDV +YN ++
Sbjct: 196 FDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLC 255
Query: 173 RLGMPDEANRVFKDVLLSA-ETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
R G A+ V +L A + P+ +Y ++ G C + A+ +F ++ RG P
Sbjct: 256 RAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPN 315
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREA--GHEPNAITFTTVMNCCFRCGRLEQGLEI 289
+TYN LI GL +A R +E + +L +A P+A TF ++ G L+ +++
Sbjct: 316 AVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKV 375
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV-------EPDLASYNT 342
EM + D +Y ++ L A+ + ++ V +P A+YN
Sbjct: 376 FQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNP 435
Query: 343 MIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
M G+ +A ++ Q+ K G D ++ +I G C+ + A + L M
Sbjct: 436 MFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAYELLVLMLRRE 494
Query: 403 FGFNLVASNCVLDGLGKAG 421
F +L ++DGL K G
Sbjct: 495 FVPDLETYELLIDGLLKIG 513
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 173/413 (41%), Gaps = 15/413 (3%)
Query: 19 HPAILNHENPITSF-LTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAEC 77
HP ++++ + + + Q I + V ++ +G + N I + +A + D+ +
Sbjct: 278 HPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKD 337
Query: 78 VLIDG--VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSG 135
+LI G PD TFN LI A+C DA +V + M L PD SY+ L+
Sbjct: 338 ILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRT 397
Query: 136 AVRKGLFPMTLHMFDKMIESEI-------RPDVWSYNILMHCYFRLGMPDEANRVFKDVL 188
+ F +F+++ E E+ +P +YN + G +A +VF+ ++
Sbjct: 398 LCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLM 457
Query: 189 LSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRA 248
DP +Y +I G C+ G A + + RR FVP++ TY LI+GL K A
Sbjct: 458 KRGVQDP--PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEA 515
Query: 249 NEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTV 308
A L + + P A TF +V+ + + ++T M K + V
Sbjct: 516 LLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQV 575
Query: 309 VAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGP 368
V L + + +A I + NG L ++ ++ +A LV ++
Sbjct: 576 VRLLFSSAQKEKAFLIVRLLYDNGY---LVKMEELLGYLCENRKLLDAHTLVLFCLEKSQ 632
Query: 369 GNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
D T +I GLCK KR +EA + + LG L + + L AG
Sbjct: 633 MVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAG 685
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 186/453 (41%), Gaps = 28/453 (6%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM- 117
N I CK +D+A + D PDVVT+NT+ID CR VL M
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 118 -KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
K + P+V+SY +L+ G K + +F M+ ++P+ +YN L+
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Query: 177 PDEANRVFKDVLLSAET-----DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
DE KD+L+ P T+N++I C G++ A+ +F+ + P+
Sbjct: 332 YDE----IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPD 387
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREA----GHE---PNAITFTTVMNCCFRCGRLE 284
+Y+ LI LC + A L +E E G + P A + + G+ +
Sbjct: 388 SASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTK 447
Query: 285 QGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
Q ++ ++ +G D +Y T++ + G+ A E+ M+ PDL +Y +I
Sbjct: 448 QAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLI 506
Query: 345 YLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFG 404
+ G A + + ++ + T ++ L K K NE+ + M
Sbjct: 507 DGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIR 566
Query: 405 FNLVASNCVLDGLGKAGHIDRA-----LKFFEGMEVRDSFTYTILVHNLCRARRFLCASK 459
N+ S V+ L + ++A L + G V+ L+ LC R+ L A
Sbjct: 567 QNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVK----MEELLGYLCENRKLLDAHT 622
Query: 460 HLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
++ CL+ V T VI+GL +EA
Sbjct: 623 LVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEA 655
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 123/322 (38%), Gaps = 82/322 (25%)
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEAR---------------------- 252
+ L F + +GF + ++ ++ L +AR N AR
Sbjct: 83 DGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142
Query: 253 ----------------RLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM-RS 295
+L ++ G P+ +TF ++++ + GR ++ EM R+
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDE 355
G T D + + T++ K V EA I + M PD+ +YNT+I R G+V
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262
Query: 356 ALELVDQIEKEGPG--NDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
A ++ + K+ + ++T ++ G C + ++EAV M S G N V N +
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 322
Query: 414 LDGLGK-------------------------------------AGHIDRALKFFEGMEVR 436
+ GL + AGH+D A+K F+ M
Sbjct: 323 IKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNM 382
Query: 437 ----DSFTYTILVHNLCRARRF 454
DS +Y++L+ LC F
Sbjct: 383 KLHPDSASYSVLIRTLCMRNEF 404
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 32/251 (12%)
Query: 66 MCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPD 125
+C + +AE V +K GV D ++ TLI +CR F E+L M PD
Sbjct: 440 LCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPD 498
Query: 126 VISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILM------------HCYFR 173
+ +Y L+ G ++ G + +M+ S P +++ ++ C
Sbjct: 499 LETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVT 558
Query: 174 LGMP-------DEANRVFKDVLLSAETDPSTATYNVMING------------LCKNGYVH 214
L + D + +V + + SA+ + + ++ + LC+N +
Sbjct: 559 LMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLL 618
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
+A ++ + + ++ T N +I GLCK +R +EA L +E E G+ +
Sbjct: 619 DAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLR 678
Query: 275 NCCFRCGRLEQ 285
N G+ E+
Sbjct: 679 NALEAAGKWEE 689
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 191/449 (42%), Gaps = 58/449 (12%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
I + S CK Q+DKA ++ + + + T+ LI + + D ++ E+M+
Sbjct: 253 ILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRM 312
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPD-------------------- 160
G+ D+ Y+ L+ G + M L ++ ++ S I PD
Sbjct: 313 GMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRI 372
Query: 161 -------------VWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD------------- 194
+ Y L + R + EA ++++ + E+D
Sbjct: 373 TEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHN 432
Query: 195 ----PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANE 250
P + + +++IN L K V A+++ ++ + G +P + YN +I G+CK R+ E
Sbjct: 433 KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEE 492
Query: 251 ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCT--V 308
+ +LL E ++AG EP+ T + C L++L +MR Y F+ + T +
Sbjct: 493 SLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRF--YGFEPWIKHTTFL 550
Query: 309 VAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGP 368
V L + GR V+A + + + G + + I + VD LEL I G
Sbjct: 551 VKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGH 610
Query: 369 GNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRAL- 427
D + ++I LCKA R EA + M S G + N ++DG K G IDR L
Sbjct: 611 CPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLS 670
Query: 428 ---KFFEGMEVRDSFTYTILVHNLCRARR 453
+ +E + D TYT L+H LC + R
Sbjct: 671 CIVRMYEDEKNPDVITYTSLIHGLCASGR 699
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 166/332 (50%), Gaps = 3/332 (0%)
Query: 108 DAGCEVLERMKE--AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
D E+++ +K+ + PD S + +++ V+ M + + ++++ + P YN
Sbjct: 419 DGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYN 478
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
++ + G +E+ ++ + + A +PS T N + L + AL + + ++
Sbjct: 479 NIIEGMCKEGRSEESLKLLGE-MKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRF 537
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQ 285
GF P + L+ LC+ RA +A + L + G + + T ++ + +++
Sbjct: 538 YGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDR 597
Query: 286 GLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIY 345
GLE+ ++ + G+ D AY ++ AL K R +EAD + +M+S G++P +A+YN+MI
Sbjct: 598 GLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMID 657
Query: 346 LYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGF 405
+ ++G +D L + ++ ++ D T+T +IHGLC + R +EA+ + M
Sbjct: 658 GWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYP 717
Query: 406 NLVASNCVLDGLGKAGHIDRALKFFEGMEVRD 437
N + ++ GL K G AL +F ME ++
Sbjct: 718 NRITFMALIQGLCKCGWSGEALVYFREMEEKE 749
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 11/354 (3%)
Query: 14 AYPFTHPAILNHENPITSFLTQRIT-HSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQL 72
AY F + N+E+ S + + + H+K I+ SLS I I + KA ++
Sbjct: 405 AYSFIQNLMGNYESDGVSEIVKLLKDHNK----AILPDSDSLS-----IVINCLVKANKV 455
Query: 73 DKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSL 132
D A +L D V+ G++P + +N +I+ C+ + ++L MK+AG+ P + N +
Sbjct: 456 DMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCI 515
Query: 133 MSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAE 192
+ F L + KM P + L+ G +A + DV
Sbjct: 516 YGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGF 575
Query: 193 TDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEAR 252
A+ I+GL KN V L +FR++ G P+V+ Y+ LI LCKA R EA
Sbjct: 576 LGHMVAS-TAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEAD 634
Query: 253 RLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAAL 312
L +E G +P T+ ++++ + G +++GL + M D Y +++ L
Sbjct: 635 ILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGL 694
Query: 313 VKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE 366
+GR EA +M P+ ++ +I + G EAL ++E++
Sbjct: 695 CASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEK 748
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 189/460 (41%), Gaps = 43/460 (9%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGV-LPDVVTFNTLIDAYCRFVSFDAGCEVLE----RM 117
I + A +D+A V ++G+ +P+ T+N L++A + S + E++E M
Sbjct: 148 IRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISK--SNSSSVELVEARLKEM 205
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
++ G D + ++ G L +F++++ S D IL+ + + G
Sbjct: 206 RDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEIL-SRGWLDEHISTILVVSFCKWGQV 264
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
D+A + ++L + + TY V+I+G K + A +F ++R G ++ Y+
Sbjct: 265 DKAFELI-EMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDV 323
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LI GLCK + A L E + +G P+ ++ L + E++ K
Sbjct: 324 LIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKK 383
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN------------------GVEPDLAS 339
Y ++ ++ V EA + +M N + PD S
Sbjct: 384 SVM--LLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDS 441
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEG--PGNDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
+ +I + +VD A+ L+ I + G PG Y + II G+CK R E+++ L
Sbjct: 442 LSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNN--IIEGMCKEGRSEESLKLLGE 499
Query: 398 MNSLGFGFNLVASNCVLDGLGK----AGHIDRALKF-FEGMEVRDSFTYTILVHNLCRAR 452
M G + NC+ L + G +D K F G E T T LV LC
Sbjct: 500 MKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHT-TFLVKKLCENG 558
Query: 453 RFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
R + A K+L GF A IDGLI KNE
Sbjct: 559 RAVDACKYLDDVAGEGFLGHMVASTAAIDGLI----KNEG 594
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
C+ L+ + G +++ + + G ++ L +F + + PDV +Y++L+
Sbjct: 563 ACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIK 622
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
+ EA+ +F + ++S P+ ATYN MI+G CK G + LS +
Sbjct: 623 ALCKACRTMEADILFNE-MVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKN 681
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P+V+TY +LI+GLC + R +EA +E + PN ITF ++ +CG + L
Sbjct: 682 PDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVY 741
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
EM K D Y ++V++ + + + I +M+ G P N M+
Sbjct: 742 FREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYML 796
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 12/246 (4%)
Query: 56 TKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLE 115
T FL + +C+ + A L D G L +V ID + D G E+
Sbjct: 547 TTFL---VKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFR 603
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
+ G PDVI+Y+ L+ + +F++M+ ++P V +YN ++ + + G
Sbjct: 604 DICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEG 663
Query: 176 MPDEA----NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
D R+++D E +P TY +I+GLC +G A+ + ++ + P
Sbjct: 664 EIDRGLSCIVRMYED-----EKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPN 718
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILT 291
+T+ ALI GLCK + EA E E EP++ + ++++ + G I
Sbjct: 719 RITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFR 778
Query: 292 EMRSKG 297
EM KG
Sbjct: 779 EMVHKG 784
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 42/280 (15%)
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
K+ G D+ +YN++ S R + ++ S ++ + C G+
Sbjct: 98 KQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLV 157
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
DEA+ VF V GLC VP TYN
Sbjct: 158 DEASSVFD---------------RVREMGLC--------------------VPNAYTYNC 182
Query: 238 LINGLCKARRAN----EARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
L+ + K+ ++ EAR L E R+ G + T T V+ G+ E+ L + E+
Sbjct: 183 LLEAISKSNSSSVELVEAR--LKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEI 240
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
S+G+ D +V + K G+V +A E+ E + + + +Y +I+ + ++ R+
Sbjct: 241 LSRGW-LDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRI 299
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
D+A +L +++ + G D + ++I GLCK K L A+
Sbjct: 300 DKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALS 339
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 132/309 (42%), Gaps = 40/309 (12%)
Query: 131 SLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLS 190
++++G R GL + + K + R D+++YN + R + DVL +
Sbjct: 78 TVLNGFKRWGLAYLFFNWASK--QEGYRNDMYAYNAMASILSRARQNASLKALVVDVL-N 134
Query: 191 AETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF-VPEVLTYNALINGLCKARRAN 249
+ S + I L G V A S+F ++ G VP TYN L+ + K+ N
Sbjct: 135 SRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKS---N 191
Query: 250 EARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVV 309
+ L E R L EMR G+ FD F V+
Sbjct: 192 SSSVELVEAR------------------------------LKEMRDCGFHFDKFTLTPVL 221
Query: 310 AALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPG 369
TG+ A + +++S G + S ++ + + G+VD+A EL++ +E+
Sbjct: 222 QVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIR 280
Query: 370 NDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKF 429
+ T+ ++IHG K R+++A Q + M +G ++ + ++ GL K ++ AL
Sbjct: 281 LNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSL 340
Query: 430 FEGMEVRDS 438
+ +E++ S
Sbjct: 341 Y--LEIKRS 347
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 195/435 (44%), Gaps = 49/435 (11%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLER--- 116
N+ + ++CK ++D A+ +L++ G PD V++ T+I + C G E+ ER
Sbjct: 185 NVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEP 244
Query: 117 ---------------------------MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
M E G++P+VISY++L++ G +
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
+M++ P++++ + L+ F G +A ++ ++ P+ YN ++ G C
Sbjct: 305 TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCS 364
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
+G + A+S+F +++ G P + TY +LING K + A + ++ +G PN +
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGY------TFDGFAYCTVVAALVKTGRVVEADE 323
+T ++ R + ++ E L E+ SK TF+ F + L GR+ A++
Sbjct: 425 YTNMVEALCRHSKFKEA-ESLIEIMSKENCAPSVPTFNAF-----IKGLCDAGRLDWAEK 478
Query: 324 IAEQM-MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+ QM + P++ +YN ++ + R++EA L +I G T+ ++HG
Sbjct: 479 VFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGS 538
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEV------R 436
C A A+Q + M G + + N ++ K G +RA + + +
Sbjct: 539 CNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRP 598
Query: 437 DSFTYTILVHNLCRA 451
D +YT ++ LCR+
Sbjct: 599 DVISYTNVIWGLCRS 613
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 177/416 (42%), Gaps = 47/416 (11%)
Query: 45 FRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRF 104
+RI G S K N + ++ ++ V D + G P+V T+N L+ A C+
Sbjct: 135 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194
Query: 105 VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY 164
D ++L M G PD +SY +++S GL
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL----------------------- 231
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ 224
V + L+ +P + YN +INGLCK A + R +
Sbjct: 232 ------------------VKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMV 273
Query: 225 RRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLE 284
+G P V++Y+ LIN LC + + A L++ + G PN T ++++ CF G
Sbjct: 274 EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF 333
Query: 285 QGLEILTEM-RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
L++ +M R G + AY T+V G +V+A + M G P++ +Y ++
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
I + ++G +D A+ + +++ G + +T ++ LC+ + EA ++ M+
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR-----DSFTYTILVHNLCRARRF 454
++ N + GL AG +D A K F ME + + TY L+ L +A R
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 180/411 (43%), Gaps = 15/411 (3%)
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
+TF +I D+ +L++MK G + S++S + GL + MF +
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
+ E P V YN ++ V++D+ +P+ TYNV++ LCKN
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG-FEPNVFTYNVLLKALCKNN 195
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
V A + + +G P+ ++Y +I+ +C+ E R L F EP +
Sbjct: 196 KVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYN 250
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
++N + + E++ EM KG + + +Y T++ L +G++ A QM+
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQ-IEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
G P++ + ++++ F +G +AL+L +Q I G + + ++ G C + +
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 391 AVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVH 446
AV HM +G N+ +++G K G +D A+ + M + YT +V
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 447 NLCRARRFLCASK--HLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
LCR +F A +++ C V T A I GL G + A+KV
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSV--PTFNAFIKGLCDAGRLDWAEKV 479
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 147/331 (44%), Gaps = 6/331 (1%)
Query: 19 HPAILNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKFL--NICIASMCKAKQLDKAE 76
HP I + + + T + M++G L + N + C + KA
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 77 CVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGA 136
V ++G P++ T+ +LI+ + + S D + +M +G P+V+ Y +++
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432
Query: 137 VRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPS 196
R F + + M + P V ++N + G D A +VF+ + P+
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPN 492
Query: 197 TATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
TYN +++GL K + A + R + RG TYN L++G C A A +L+
Sbjct: 493 IVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVG 552
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLE---QGLEILTEMRSKGYTFDGFAYCTVVAALV 313
+ G P+ IT ++ + G+ E Q L++++ R K + D +Y V+ L
Sbjct: 553 KMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK-WRPDVISYTNVIWGLC 611
Query: 314 KTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
++ + + E+M+S G+ P +A+++ +I
Sbjct: 612 RSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 14/284 (4%)
Query: 216 ALSMFRNLQRRG-FVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
AL F+++ F LT+ +I L + + + LL + + G + F +V+
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 275 NCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
+ + G E+ +E+ ++ G Y V+ L+ R+ + M +G E
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 335 PDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQH 394
P++ +YN ++ + +VD A +L+ ++ +G D ++T +I +C+ + E
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG--- 235
Query: 395 LDHMNSLGFGFNLVAS--NCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNL 448
L F V S N +++GL K A + M + + +Y+ L++ L
Sbjct: 236 ----RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291
Query: 449 CRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
C + + A L L+ G T +++ G G +A
Sbjct: 292 CNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 193/424 (45%), Gaps = 6/424 (1%)
Query: 19 HPAILNHENPITSFLTQRITHS-KNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAEC 77
P+++++ + + Q+ S ++ + G L + F N I + ++ ++ A
Sbjct: 77 RPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQ 136
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAG---LTPDVISYNSLMS 134
L+ +LG+ P T+NTLI Y + E+L+ M E G + P++ ++N L+
Sbjct: 137 ALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQ 196
Query: 135 GAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA-NRVFKDVLLSAET 193
+K + KM E +RPD +YN + CY + G A + V + +++ +
Sbjct: 197 AWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKA 256
Query: 194 DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARR 253
P+ T +++ G C+ G V + L R ++ ++ +N+LING + +
Sbjct: 257 KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDE 316
Query: 254 LLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
+L+ +E + + IT++TVMN G +E+ ++ EM G D AY + V
Sbjct: 317 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 376
Query: 314 KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQY 373
+ +A+E+ E ++ P++ + T+I + G +D+A+ + +++ K G +
Sbjct: 377 RAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIK 435
Query: 374 THTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
T ++ G + K+ +A + L M G + + AG D + K +
Sbjct: 436 TFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINAL 495
Query: 434 EVRD 437
+ +D
Sbjct: 496 KCKD 499
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/454 (20%), Positives = 184/454 (40%), Gaps = 47/454 (10%)
Query: 56 TKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLE 115
TK +N+ I + + +A+ V + G P ++++ TL+ A + + ++
Sbjct: 49 TKLMNVLI----ERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
++++G D I +N++++ G + KM E + P +YN L+ Y G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 176 MPDEANRVFKDVLLSAETD--PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
P+ ++ + +L D P+ T+NV++ CK V A + + ++ G P+ +
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 234 TYNAL-------------------------------------INGLCKARRANEARRLLS 256
TYN + + G C+ R + R +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
+E E N + F +++N + E+LT M+ D Y TV+ A G
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAG 344
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHT 376
+ +A ++ ++M+ GV+PD +Y+ + Y R +A EL++ + E N T
Sbjct: 345 YMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPN-VVIFT 403
Query: 377 IIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDG---LGKAGHIDRALKFFEGM 433
+I G C +++A++ + M G N+ ++ G + + + L+ G
Sbjct: 404 TVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGC 463
Query: 434 EVRDSFTYTILVHNLCRARRFLCASKHLVACLQC 467
V+ + +L+ R S + L+C
Sbjct: 464 GVKPENSTFLLLAEAWRVAGLTDESNKAINALKC 497
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 13/169 (7%)
Query: 312 LVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGND 371
L++ GR EA + + + G P L SY T++ Q + +V ++E+ G D
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 372 QYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE 431
+I+ ++ + +AVQ L M LG N ++ G G AG +R+ + +
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 432 ----------GMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQ 470
G +R T+ +LV C+ ++ A + + +CG +
Sbjct: 175 LMLEEGNVDVGPNIR---TFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 150/317 (47%), Gaps = 36/317 (11%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ ++ +AKQ +L + V+ G P+ VT+N LI +Y R + V +M+EAG
Sbjct: 371 VGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGC 430
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PD ++Y +L+ + G + + M+ +M + PD
Sbjct: 431 KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD---------------------- 468
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
T TY+V+IN L K G++ A +F + +G P ++TYN +++
Sbjct: 469 --------------TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
KAR A +L + + AG EP+ +T++ VM CG LE+ + TEM+ K + D
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
Y +V K G V +A + + M+ G+ P++ + N+++ + R ++ EA EL+
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 363 IEKEGPGNDQYTHTIII 379
+ G T+T+++
Sbjct: 635 MLALGLRPSLQTYTLLL 651
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 140/306 (45%), Gaps = 5/306 (1%)
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
++ G D +Y +++ R F + D+M+ +P+ +YN L+H Y R
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
+EA VF + A P TY +I+ K G++ A+ M++ +Q G P+ TY+
Sbjct: 416 NEAMNVFNQ-MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
+IN L KA A +L E + G PN +T+ +M+ + + L++ +M++ G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
+ D Y V+ L G + EA+ + +M PD Y ++ L+ + G V++A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVAS----NCV 413
+ + G + T ++ + ++ EA + L +M +LG +L +C
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC 654
Query: 414 LDGLGK 419
DG K
Sbjct: 655 TDGRSK 660
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I S +A L++A V + G PD VT+ TLID + + D ++ +RM+
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GL+PD +Y+ +++ + G P +F +M++ P++ +YNI+M + +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A ++++D + +A +P TY++++ L GY+ A ++F +Q++ ++P+ Y L+
Sbjct: 523 ALKLYRD-MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
+ KA +A + AG PN T ++++ R ++ + E+L M + G
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 118/235 (50%)
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
TY M+ L + + + R G P +TYN LI+ +A NEA + ++
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
+EAG +P+ +T+ T+++ + G L+ +++ M++ G + D F Y ++ L K G +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
A ++ +M+ G P+L +YN M+ L+ + AL+L ++ G D+ T++I+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
+ L L EA M + + ++D GKAG++++A ++++ M
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 5/261 (1%)
Query: 215 NALSMFRNLQRR-GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
NAL F L+R+ GF + TY ++ L +A++ +LL E G +PN +T+ +
Sbjct: 346 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL 405
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
++ R L + + + +M+ G D YCT++ K G + A ++ ++M + G+
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
PD +Y+ +I + G + A +L ++ +G + T+ I++ KA+ A++
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 394 HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLC 449
M + GF + V + V++ LG G+++ A F M+ + D Y +LV
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 450 RARRFLCASKHLVACLQCGFQ 470
+A A + A L G +
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLR 606
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 123/264 (46%), Gaps = 4/264 (1%)
Query: 186 DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKA 245
D ++ P+T TYN +I+ + Y++ A+++F +Q G P+ +TY LI+ KA
Sbjct: 388 DEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKA 447
Query: 246 RRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAY 305
+ A + + G P+ T++ ++NC + G L ++ EM +G T + Y
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 306 CTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEK 365
++ K A ++ M + G EPD +Y+ ++ + G ++EA + ++++
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 366 EGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDR 425
+ D+ + +++ KA + +A Q M G N+ N +L + I
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 426 ALKFFEGM---EVRDSF-TYTILV 445
A + + M +R S TYT+L+
Sbjct: 628 AYELLQNMLALGLRPSLQTYTLLL 651
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 4/216 (1%)
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
R G+ DG Y T+V L + + +++ ++M+ +G +P+ +YN +I+ Y R +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
+EA+ + +Q+++ G D+ T+ +I KA L+ A+ M + G + + +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 414 LDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGF 469
++ LGKAGH+ A K F M + TY I++ +AR + A K GF
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 470 QVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQLL 505
+ K T V++ L G EA+ V ++++ +
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
R+ G S T ++ I + KA L A + + V G P++VT+N ++D + +
Sbjct: 459 RMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKAR 518
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
++ ++ M+ AG PD ++Y+ +M
Sbjct: 519 NYQNALKLYRDMQNAGFEPDKVTYSIVME------------------------------- 547
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
+L HC G +EA VF + + P Y ++++ K G V A ++ +
Sbjct: 548 VLGHC----GYLEEAEAVFTE-MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCC 277
G P V T N+L++ + + EA LL G P+ T+T +++CC
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC 654
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 150/317 (47%), Gaps = 36/317 (11%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ ++ +AKQ +L + V+ G P+ VT+N LI +Y R + V +M+EAG
Sbjct: 371 VGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGC 430
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PD ++Y +L+ + G + + M+ +M + PD
Sbjct: 431 KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD---------------------- 468
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
T TY+V+IN L K G++ A +F + +G P ++TYN +++
Sbjct: 469 --------------TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
KAR A +L + + AG EP+ +T++ VM CG LE+ + TEM+ K + D
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
Y +V K G V +A + + M+ G+ P++ + N+++ + R ++ EA EL+
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 363 IEKEGPGNDQYTHTIII 379
+ G T+T+++
Sbjct: 635 MLALGLRPSLQTYTLLL 651
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 140/306 (45%), Gaps = 5/306 (1%)
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
++ G D +Y +++ R F + D+M+ +P+ +YN L+H Y R
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
+EA VF + A P TY +I+ K G++ A+ M++ +Q G P+ TY+
Sbjct: 416 NEAMNVFNQ-MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
+IN L KA A +L E + G PN +T+ +M+ + + L++ +M++ G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
+ D Y V+ L G + EA+ + +M PD Y ++ L+ + G V++A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVAS----NCV 413
+ + G + T ++ + ++ EA + L +M +LG +L +C
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC 654
Query: 414 LDGLGK 419
DG K
Sbjct: 655 TDGRSK 660
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I S +A L++A V + G PD VT+ TLID + + D ++ +RM+
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GL+PD +Y+ +++ + G P +F +M++ P++ +YNI+M + +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A ++++D + +A +P TY++++ L GY+ A ++F +Q++ ++P+ Y L+
Sbjct: 523 ALKLYRD-MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
+ KA +A + AG PN T ++++ R ++ + E+L M + G
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 118/235 (50%)
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
TY M+ L + + + R G P +TYN LI+ +A NEA + ++
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
+EAG +P+ +T+ T+++ + G L+ +++ M++ G + D F Y ++ L K G +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
A ++ +M+ G P+L +YN M+ L+ + AL+L ++ G D+ T++I+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
+ L L EA M + + ++D GKAG++++A ++++ M
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 5/261 (1%)
Query: 215 NALSMFRNLQRR-GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
NAL F L+R+ GF + TY ++ L +A++ +LL E G +PN +T+ +
Sbjct: 346 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL 405
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
++ R L + + + +M+ G D YCT++ K G + A ++ ++M + G+
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
PD +Y+ +I + G + A +L ++ +G + T+ I++ KA+ A++
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 394 HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLC 449
M + GF + V + V++ LG G+++ A F M+ + D Y +LV
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 450 RARRFLCASKHLVACLQCGFQ 470
+A A + A L G +
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLR 606
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 123/264 (46%), Gaps = 4/264 (1%)
Query: 186 DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKA 245
D ++ P+T TYN +I+ + Y++ A+++F +Q G P+ +TY LI+ KA
Sbjct: 388 DEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKA 447
Query: 246 RRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAY 305
+ A + + G P+ T++ ++NC + G L ++ EM +G T + Y
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 306 CTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEK 365
++ K A ++ M + G EPD +Y+ ++ + G ++EA + ++++
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 366 EGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDR 425
+ D+ + +++ KA + +A Q M G N+ N +L + I
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 426 ALKFFEGM---EVRDSF-TYTILV 445
A + + M +R S TYT+L+
Sbjct: 628 AYELLQNMLALGLRPSLQTYTLLL 651
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 4/216 (1%)
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
R G+ DG Y T+V L + + +++ ++M+ +G +P+ +YN +I+ Y R +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
+EA+ + +Q+++ G D+ T+ +I KA L+ A+ M + G + + +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 414 LDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGF 469
++ LGKAGH+ A K F M + TY I++ +AR + A K GF
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 470 QVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQLL 505
+ K T V++ L G EA+ V ++++ +
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
R+ G S T ++ I + KA L A + + V G P++VT+N ++D + +
Sbjct: 459 RMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKAR 518
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
++ ++ M+ AG PD ++Y+ +M
Sbjct: 519 NYQNALKLYRDMQNAGFEPDKVTYSIVME------------------------------- 547
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
+L HC G +EA VF + + P Y ++++ K G V A ++ +
Sbjct: 548 VLGHC----GYLEEAEAVFTE-MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCC 277
G P V T N+L++ + + EA LL G P+ T+T +++CC
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC 654
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 150/317 (47%), Gaps = 36/317 (11%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ ++ +AKQ +L + V+ G P+ VT+N LI +Y R + V +M+EAG
Sbjct: 371 VGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGC 430
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PD ++Y +L+ + G + + M+ +M + PD
Sbjct: 431 KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD---------------------- 468
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
T TY+V+IN L K G++ A +F + +G P ++TYN +++
Sbjct: 469 --------------TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
KAR A +L + + AG EP+ +T++ VM CG LE+ + TEM+ K + D
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
Y +V K G V +A + + M+ G+ P++ + N+++ + R ++ EA EL+
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 363 IEKEGPGNDQYTHTIII 379
+ G T+T+++
Sbjct: 635 MLALGLRPSLQTYTLLL 651
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 140/306 (45%), Gaps = 5/306 (1%)
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
++ G D +Y +++ R F + D+M+ +P+ +YN L+H Y R
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
+EA VF + A P TY +I+ K G++ A+ M++ +Q G P+ TY+
Sbjct: 416 NEAMNVFNQ-MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
+IN L KA A +L E + G PN +T+ +M+ + + L++ +M++ G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
+ D Y V+ L G + EA+ + +M PD Y ++ L+ + G V++A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVAS----NCV 413
+ + G + T ++ + ++ EA + L +M +LG +L +C
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC 654
Query: 414 LDGLGK 419
DG K
Sbjct: 655 TDGRSK 660
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 118/235 (50%)
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
TY M+ L + + + R G P +TYN LI+ +A NEA + ++
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
+EAG +P+ +T+ T+++ + G L+ +++ M++ G + D F Y ++ L K G +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
A ++ +M+ G P+L +YN M+ L+ + AL+L ++ G D+ T++I+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
+ L L EA M + + ++D GKAG++++A ++++ M
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I S +A L++A V + G PD VT+ TLID + + D ++ +RM+
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GL+PD +Y+ +++ + G P +F +M++ P++ +YNI+M + +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A ++++D + +A +P TY++++ L GY+ A ++F +Q++ ++P+ Y L+
Sbjct: 523 ALKLYRD-MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
+ KA +A + AG PN T ++++ R ++ + E+L M + G
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 5/261 (1%)
Query: 215 NALSMFRNLQRR-GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
NAL F L+R+ GF + TY ++ L +A++ +LL E G +PN +T+ +
Sbjct: 346 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL 405
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
++ R L + + + +M+ G D YCT++ K G + A ++ ++M + G+
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
PD +Y+ +I + G + A +L ++ +G + T+ I++ KA+ A++
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 394 HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLC 449
M + GF + V + V++ LG G+++ A F M+ + D Y +LV
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 450 RARRFLCASKHLVACLQCGFQ 470
+A A + A L G +
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLR 606
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 123/264 (46%), Gaps = 4/264 (1%)
Query: 186 DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKA 245
D ++ P+T TYN +I+ + Y++ A+++F +Q G P+ +TY LI+ KA
Sbjct: 388 DEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKA 447
Query: 246 RRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAY 305
+ A + + G P+ T++ ++NC + G L ++ EM +G T + Y
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 306 CTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEK 365
++ K A ++ M + G EPD +Y+ ++ + G ++EA + ++++
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 366 EGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDR 425
+ D+ + +++ KA + +A Q M G N+ N +L + I
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 426 ALKFFEGM---EVRDSF-TYTILV 445
A + + M +R S TYT+L+
Sbjct: 628 AYELLQNMLALGLRPSLQTYTLLL 651
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 4/216 (1%)
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
R G+ DG Y T+V L + + +++ ++M+ +G +P+ +YN +I+ Y R +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
+EA+ + +Q+++ G D+ T+ +I KA L+ A+ M + G + + +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 414 LDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGF 469
++ LGKAGH+ A K F M + TY I++ +AR + A K GF
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 470 QVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQLL 505
+ K T V++ L G EA+ V ++++ +
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
R+ G S T ++ I + KA L A + + V G P++VT+N ++D + +
Sbjct: 459 RMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKAR 518
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
++ ++ M+ AG PD ++Y+ +M
Sbjct: 519 NYQNALKLYRDMQNAGFEPDKVTYSIVME------------------------------- 547
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
+L HC G +EA VF + + P Y ++++ K G V A ++ +
Sbjct: 548 VLGHC----GYLEEAEAVFTE-MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCC 277
G P V T N+L++ + + EA LL G P+ T+T +++CC
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC 654
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 164/347 (47%), Gaps = 6/347 (1%)
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEA-GLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
T+ L C F FD ++L+ M ++ GL PD + +++ G R L + + D
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
+ + I+P + +N ++ + + D A F ++++ TY +++ GL
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDI-DIAREFFTRKMMASGIHGDVYTYGILMKGLSLTN 196
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
+ + + + ++ G P + YN L++ LCK + AR L+SE +E PN +TF
Sbjct: 197 RIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFN 252
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
+++ +L Q + +L + S G+ D V+ L GRV EA E+ E++ S
Sbjct: 253 ILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESK 312
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
G + D+ + NT++ Y G++ A ++E++G + T+ ++I G C L+ A
Sbjct: 313 GGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSA 372
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS 438
+ + M + +N N ++ GL G D LK E M+ D+
Sbjct: 373 LDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDT 419
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 165/354 (46%), Gaps = 11/354 (3%)
Query: 85 LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
+G+ PD F T+I + R V++ + + G+ P + +NS++ V++ +
Sbjct: 106 IGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIA 165
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFK--DVLLSAETDPSTATYNV 202
KM+ S I DV++Y ILM L + + FK ++ ++ P+ YN
Sbjct: 166 REFFTRKMMASGIHGDVYTYGILMK---GLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNT 222
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+++ LCKNG V A S+ ++ P +T+N LI+ C ++ ++ LL + G
Sbjct: 223 LLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLG 278
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
P+ +T T VM GR+ + LE+L + SKG D A T+V G++ A
Sbjct: 279 FVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQ 338
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+M G P++ +YN +I Y G +D AL+ + ++ + + T +I GL
Sbjct: 339 RFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGL 398
Query: 383 CKAKRLNEAVQHLDHMNSLG--FGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
R ++ ++ L+ M G + NCV+ G K + AL+F ME
Sbjct: 399 SIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKME 452
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 179/408 (43%), Gaps = 19/408 (4%)
Query: 33 LTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVV 92
LT RI + + G + + N + ++CK ++ +A ++ + + P+ V
Sbjct: 194 LTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDV 249
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
TFN LI AYC +LE+ G PDV++ +M +G L + +++
Sbjct: 250 TFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERV 309
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
+ DV + N L+ Y LG A R F ++ P+ TYN++I G C G
Sbjct: 310 ESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYL-PNVETYNLLIAGYCDVGM 368
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG--HEPNAITF 270
+ +AL F +++ T+N LI GL R ++ ++L +++ H +
Sbjct: 369 LDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPY 428
Query: 271 TTVMNCCFRCGRLEQGLEILTEM-----RSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
V+ ++ R E LE L +M R+ +F + C + G + +
Sbjct: 429 NCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLC-------EKGGMDDLKTAY 481
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
+QM+ G P + + +I+ Y + G+++E+LEL++ + G T +I G CK
Sbjct: 482 DQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQ 541
Query: 386 KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
++ ++ ++ M G + + N +L+ L G I +A F M
Sbjct: 542 DKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRM 589
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 170/386 (44%), Gaps = 25/386 (6%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G+ DV T+ L+ G ++L+ MK +G+ P+ + YN+L+ + G
Sbjct: 177 GIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRA 236
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLL----SAETDPSTATYN 201
+ +M E P+ ++NIL+ Y +E + VLL S P T
Sbjct: 237 RSLMSEMKE----PNDVTFNILISAYC-----NEQKLIQSMVLLEKCFSLGFVPDVVTVT 287
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
++ LC G V AL + ++ +G +V+ N L+ G C + A+R E
Sbjct: 288 KVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERK 347
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
G+ PN T+ ++ G L+ L+ +M++ ++ + T++ L GR +
Sbjct: 348 GYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDG 407
Query: 322 DEIAEQMMSN----GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI 377
+I E M + G D YN +IY ++++ R ++ALE + ++EK P + +
Sbjct: 408 LKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKL 465
Query: 378 IIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD 437
I LC+ +++ D M G +++ S+C++ + G I+ +L+ M R
Sbjct: 466 I--SLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRG 523
Query: 438 ----SFTYTILVHNLCRARRFLCASK 459
S T+ ++ C+ + + K
Sbjct: 524 YLPRSSTFNAVIIGFCKQDKVMNGIK 549
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 143/314 (45%), Gaps = 9/314 (2%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
R++ + V R+ KG + N + C ++ A+ I+ + G LP+V T+N
Sbjct: 298 RVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYN 357
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
LI YC D+ + MK + + ++N+L+ G G L + + M +S
Sbjct: 358 LLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDS 417
Query: 156 EI----RPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
+ R D YN +++ +++ ++A + +L + P + + LC+ G
Sbjct: 418 DTVHGARID--PYNCVIYGFYKENRWEDA---LEFLLKMEKLFPRAVDRSFKLISLCEKG 472
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
+ + + + + G VP ++ + LI+ + + E+ L+++ G+ P + TF
Sbjct: 473 GMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFN 532
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
V+ + ++ G++ + +M +G D +Y ++ L G + +A + +M+
Sbjct: 533 AVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEK 592
Query: 332 GVEPDLASYNTMIY 345
+ PD + ++++++
Sbjct: 593 SIVPDPSMWSSLMF 606
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 120/283 (42%), Gaps = 39/283 (13%)
Query: 216 ALSMFRNLQR-RGFVPEVLTYNALINGLCKARRANEARRLLSEFREA-GHEPNAITFTTV 273
AL FR GF+ TY AL + LC RR + +LL E ++ G P+ F T+
Sbjct: 59 ALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTI 118
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
+ GF A L+K RV+ ++ + G+
Sbjct: 119 IR--------------------------GFGR----ARLIK--RVISVVDLVSKF---GI 143
Query: 334 EPDLASYNTMIYLYFRQGRVDEALEL-VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
+P L +N+++ + ++ +D A E ++ G D YT+ I++ GL R+ +
Sbjct: 144 KPSLKVFNSILDVLVKED-IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGF 202
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRAR 452
+ L M + G N V N +L L K G + RA M+ + T+ IL+ C +
Sbjct: 203 KLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQ 262
Query: 453 RFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
+ + + L C GF T V++ L ++G +EA +V
Sbjct: 263 KLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV 305
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%)
Query: 81 DGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKG 140
D V G LP TFN +I +C+ G + +E M E G PD SYN L+ KG
Sbjct: 518 DMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKG 577
Query: 141 LFPMTLHMFDKMIESEIRPDVWSYNILMHC 170
+F +M+E I PD ++ LM C
Sbjct: 578 DIQKAWLLFSRMVEKSIVPDPSMWSSLMFC 607
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 140/301 (46%), Gaps = 34/301 (11%)
Query: 85 LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
LG+ P+ FN L+ +C+ + V+E MK +G ISY
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSG-----ISY--------------- 229
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
P+ +Y+ LM C F EA +F+D++ P T+NVMI
Sbjct: 230 --------------PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
NG C+ G V A + +++ G P V Y+AL+NG CK + EA++ E ++ G +
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLK 335
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
+ + +TT+MNC R G ++ +++L EM++ D Y ++ L GR EA ++
Sbjct: 336 LDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQM 395
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
+Q S GV + SY ++ G +++A++ + + + G T ++ LC+
Sbjct: 396 LDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCE 455
Query: 385 A 385
+
Sbjct: 456 S 456
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 157/304 (51%), Gaps = 5/304 (1%)
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
++P+ +NIL+ + + G + A V +++ S + P++ TY+ +++ L + A
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 217 LSMFRNL-QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
+ +F ++ + G P+ +T+N +ING C+A A+++L ++ G PN ++ +MN
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 276 CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
+ G++++ + E++ G D Y T++ + G EA ++ +M ++
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 336 DLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHL 395
D +YN ++ +GR +EAL+++DQ EG ++ ++ II++ LC L +AV+ L
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 396 DHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM----EVRDSFTYTILVHNLCRA 451
M+ G + N ++ L ++G+ + ++ G + ++ +V ++C+
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKE 491
Query: 452 RRFL 455
R+ +
Sbjct: 492 RKLV 495
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
K G+ PD VTFN +I+ +CR + ++L+ MK+ G P+V +Y++LM+G + G
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
FD++ ++ ++ D Y LM+C+ R G DEA ++ + + ++ T TYNV+
Sbjct: 321 EAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGE-MKASRCRADTLTYNVI 379
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
+ GL G AL M G +Y ++N LC +A + LS E G
Sbjct: 380 LRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
P+ T+ ++ G E G+ +L G ++ VV ++ K ++V E
Sbjct: 440 WPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFE 499
Query: 324 IAEQMMS 330
+ + ++S
Sbjct: 500 LLDSLVS 506
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 150/317 (47%), Gaps = 7/317 (2%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGV-LPDVVTFNTLIDAYCRFVSFDA 109
G +T NI + CK ++ A V+ + + G+ P+ +T++TL+D
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 110 GCEVLERM-KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILM 168
E+ E M + G++PD +++N +++G R G + D M ++ P+V++Y+ LM
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 169 HCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF 228
+ + ++G EA + F +V + T Y ++N C+NG A+ + ++
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTG-LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 229 VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN--CCFRCGRLEQG 286
+ LTYN ++ GL R+ EA ++L ++ G N ++ ++N CC G LE+
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCC--NGELEKA 427
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
++ L+ M +G + +V L ++G + + G+ P S+ ++
Sbjct: 428 VKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVES 487
Query: 347 YFRQGRVDEALELVDQI 363
++ ++ EL+D +
Sbjct: 488 ICKERKLVHVFELLDSL 504
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 109/237 (45%), Gaps = 1/237 (0%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N+ I C+A ++++A+ +L K G P+V ++ L++ +C+ + + +K
Sbjct: 271 FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
+ GL D + Y +LM+ R G + + +M S R D +YN+++ G +
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSE 390
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
EA ++ D S + +Y +++N LC NG + A+ + RG P T+N L
Sbjct: 391 EALQML-DQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNEL 449
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
+ LC++ R+L F G P ++ V+ + +L E+L + S
Sbjct: 450 VVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 178/375 (47%), Gaps = 16/375 (4%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D T+ +I R D + M GLT +V+ YN+LM + + + +F
Sbjct: 269 DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVF 328
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKD-VLLSAETDPSTATYNVMINGLC 208
+M+E+ RP+ ++Y++L++ + E V D V+ ++ + Y+ ++ L
Sbjct: 329 SRMVETGCRPNEYTYSLLLNL-----LVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLS 383
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
K G+V A +F ++ E +Y +++ LC A + EA +LS+ E G + +
Sbjct: 384 KLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTM 443
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
+ TV + + ++ ++ +M+ G + D F Y ++A+ + G V EA I E++
Sbjct: 444 MYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL 503
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
+ +PD+ SYN++I + G VDEA +++++G D T++ ++ K +R+
Sbjct: 504 ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV 563
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTIL 444
A + M G N+V N +LD L K G A+ + M+ + DS TYT+L
Sbjct: 564 EMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Query: 445 ------VHNLCRARR 453
H R RR
Sbjct: 624 ERLQSVSHGKSRIRR 638
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
I I +M + + D+A + + + G+ +VV +NTL+ + D +V RM E
Sbjct: 275 IMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVET 334
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIR---PDVWSYNILMHCYFRLGMP 177
G P+ +Y+ L++ V +G L D ++E R ++SY L+ +LG
Sbjct: 335 GCRPNEYTYSLLLNLLVAEG----QLVRLDGVVEISKRYMTQGIYSY--LVRTLSKLGHV 388
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV-------- 229
EA+R+F D + S +Y M+ LC G A+ M + +G V
Sbjct: 389 SEAHRLFCD-MWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNT 447
Query: 230 ---------------------------PEVLTYNALINGLCKARRANEARRLLSEFREAG 262
P++ TYN LI + +EA + E +
Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD 507
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
+P+ I++ +++NC + G +++ EM+ KG D Y T++ KT RV A
Sbjct: 508 CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAY 567
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI----- 377
+ E+M+ G +P++ +YN ++ + GR EA++L +++++G D T+T+
Sbjct: 568 SLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQ 627
Query: 378 -IIHGLCKAKRLN 389
+ HG + +R N
Sbjct: 628 SVSHGKSRIRRKN 640
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 169/389 (43%), Gaps = 40/389 (10%)
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
T+ L+ AY R + +V ++ G D+ +YN L+ + +F+ M
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDM 261
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
+ R D ++Y I++ R+G DEA +F +++ T + YN ++ L K
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLT-LNVVGYNTLMQVLAKGKM 320
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALIN-------------------------------- 240
V A+ +F + G P TY+ L+N
Sbjct: 321 VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVR 380
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
L K +EA RL + + ++ +++ G+ + +E+L+++ KG
Sbjct: 381 TLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVT 440
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
D Y TV +AL K ++ ++ E+M +G PD+ +YN +I + R G VDEA+ +
Sbjct: 441 DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIF 500
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
+++E+ D ++ +I+ L K ++EA M G ++V + +++ GK
Sbjct: 501 EELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Query: 421 GHIDRALKFFEGMEVR----DSFTYTILV 445
++ A FE M V+ + TY IL+
Sbjct: 561 ERVEMAYSLFEEMLVKGCQPNIVTYNILL 589
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
+I KG T N +++ K KQ+ + K G PD+ T+N LI ++ R
Sbjct: 432 KIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
D + E ++ + PD+ISYNSL++ + G F +M E + PDV +Y+
Sbjct: 492 EVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS 551
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
LM C+ + + A +F+++L+ P+ TYN++++ L KNG A+ ++ +++
Sbjct: 552 TLMECFGKTERVEMAYSLFEEMLVKG-CQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQ 610
Query: 226 RGFVPEVLTYNAL------INGLCKARRAN 249
+G P+ +TY L +G + RR N
Sbjct: 611 QGLTPDSITYTVLERLQSVSHGKSRIRRKN 640
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 156/366 (42%), Gaps = 46/366 (12%)
Query: 125 DVISYNSLMSGAVRKGL---FPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
D YN ++ R L F + D M++S + ++ + NIL+ + G ++
Sbjct: 132 DPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFF---GNTEDLQ 188
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
+ ++ + ++ TY ++ ++ A ++ ++R G ++ YN L++
Sbjct: 189 MCLR-LVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA 247
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
L K +A + + + ++ + T+T ++ R G+ ++ + + EM ++G T +
Sbjct: 248 LAKDEKACQ---VFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLN 304
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG---RVDEALE 358
Y T++ L K V +A ++ +M+ G P+ +Y+ ++ L +G R+D +E
Sbjct: 305 VVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE 364
Query: 359 -------------LVDQIEKEGPGNDQY----------------THTIIIHGLCKAKRLN 389
LV + K G ++ + ++ ++ LC A +
Sbjct: 365 ISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILV 445
EA++ L ++ G + + N V LGK I FE M+ D FTY IL+
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 446 HNLCRA 451
+ R
Sbjct: 485 ASFGRV 490
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 166/352 (47%), Gaps = 11/352 (3%)
Query: 55 STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVL 114
S+ N + + K ++ ++ V + K + T+ L++ Y D V
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVF 201
Query: 115 ERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRL 174
ER KE G+ D+++++ L+ R +F E D+ + N++++ + L
Sbjct: 202 ERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWCVL 260
Query: 175 GMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLT 234
G EA R +KD++ +++ P +Y MIN L K G + A+ ++R + P+V
Sbjct: 261 GNVHEAKRFWKDII-ASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKI 319
Query: 235 YNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
N +I+ LC +R EA + E E G +PN +T+ +++ + R E+ E++ EM
Sbjct: 320 CNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME 379
Query: 295 SKGYTFD----GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQ 350
KG + F+Y L + R + D + E+M N E YN M LY +
Sbjct: 380 LKGGSCSPNDVTFSYL-----LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQW 434
Query: 351 GRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
+ ++ E+ ++E+ G G DQ T+TI IHGL ++ EA+ + M S G
Sbjct: 435 DKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 148/318 (46%), Gaps = 11/318 (3%)
Query: 54 LSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRF--VSFDAGC 111
++ K + + A ++D+A V + G+ D+V F+ L+ CR+ V F A
Sbjct: 176 VNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEF-AET 234
Query: 112 EVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCY 171
R +E G D+ + N +++G G + +I S+ RPDV SY +++
Sbjct: 235 LFCSRRREFGC--DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINAL 292
Query: 172 FRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
+ G +A +++ + +P N +I+ LC + AL +FR + +G P
Sbjct: 293 TKKGKLGKAMELYR-AMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPN 351
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGH--EPNAITFTTVMNCCFRCGRLEQGLEI 289
V+TYN+L+ LCK RR + L+ E G PN +TF+ ++ R ++ LE
Sbjct: 352 VVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLER 411
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
+ + + + T D Y + V+ + + EI +M +G+ PD +Y I+
Sbjct: 412 MAKNKCE-MTSD--LYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHT 468
Query: 350 QGRVDEALELVDQIEKEG 367
+G++ EAL ++ +G
Sbjct: 469 KGKIGEALSYFQEMMSKG 486
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 3/242 (1%)
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRR-GFVPEVLTYNALINGLCKARRANEARRL 254
S+ YN +++ L K +F + +R GFV E TY L+N A + +EA +
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEK-TYEVLLNRYAAAHKVDEAVGV 200
Query: 255 LSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK 314
+E G + + + F ++ R +E E L R + + D A ++
Sbjct: 201 FERRKEFGIDDDLVAFHGLLMWLCRYKHVEFA-ETLFCSRRREFGCDIKAMNMILNGWCV 259
Query: 315 TGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYT 374
G V EA + ++++ PD+ SY TMI ++G++ +A+EL + D
Sbjct: 260 LGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKI 319
Query: 375 HTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
+I LC KR+ EA++ ++ G N+V N +L L K ++ + E ME
Sbjct: 320 CNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME 379
Query: 435 VR 436
++
Sbjct: 380 LK 381
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 8/214 (3%)
Query: 52 RSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGC 111
R+ K N I ++C K++ +A V + + G P+VVT+N+L+ C+ +
Sbjct: 313 RNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVW 372
Query: 112 EVLERMKEAG--LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
E++E M+ G +P+ ++++ L+ + R + L K + E+ D+ YN++
Sbjct: 373 ELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKN-KCEMTSDL--YNLMFR 429
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
Y + ++ ++ ++ S P TY + I+GL G + ALS F+ + +G V
Sbjct: 430 LYVQWDKEEKVREIWSEMERSG-LGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMV 488
Query: 230 PEVLTYNALINGLCKARRANEARR--LLSEFREA 261
PE T L K R ++ R L SE E+
Sbjct: 489 PEPRTEMLLNQNKTKPRVEDKMLRSNLTSEESES 522
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 10/185 (5%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
PDV N +IDA C EV + E G P+V++YNSL+ + T +
Sbjct: 315 PDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK---IRRTEKV 371
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSA----ETDPSTATYNVMI 204
++ + E E++ S N + Y L + V D++L + + ++ YN+M
Sbjct: 372 WELVEEMELKGGSCSPNDVTFSYL-LKYSQRSKDV--DIVLERMAKNKCEMTSDLYNLMF 428
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
+ ++ ++R G P+ TY I+GL + EA E G
Sbjct: 429 RLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMV 488
Query: 265 PNAIT 269
P T
Sbjct: 489 PEPRT 493
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 152/321 (47%), Gaps = 10/321 (3%)
Query: 89 PDVVTFNTLIDAYCRFVSFD---AGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
P+++ + RF S + EVL+ M + GL PD + L+ + G
Sbjct: 162 PELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEA 221
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+F+ M E + P++ + L++ + R G EA V + A +P + +++
Sbjct: 222 SKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQ-MKEAGLEPDIVVFTNLLS 279
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKA-RRANEARRLLSEFREAGHE 264
G G + +A + ++++RGF P V Y LI LC+ +R +EA R+ E G E
Sbjct: 280 GYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCE 339
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
+ +T+T +++ + G +++G +L +MR KG Y ++ A K + E E+
Sbjct: 340 ADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLEL 399
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG--PGNDQYTHTIIIHGL 382
E+M G PDL YN +I L + G V EA+ L +++E G PG D T I+I+G
Sbjct: 400 IEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVD--TFVIMINGF 457
Query: 383 CKAKRLNEAVQHLDHMNSLGF 403
L EA H M S G
Sbjct: 458 TSQGFLIEACNHFKEMVSRGI 478
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 143/289 (49%), Gaps = 3/289 (1%)
Query: 69 AKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVIS 128
A + KA VL + K G+ PD F L+DA C+ S +V E M+E P++
Sbjct: 180 ANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRY 238
Query: 129 YNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL 188
+ SL+ G R+G + +M E+ + PD+ + L+ Y G +A + D +
Sbjct: 239 FTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMND-M 297
Query: 189 LSAETDPSTATYNVMINGLCK-NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARR 247
+P+ Y V+I LC+ + A+ +F ++R G +++TY ALI+G CK
Sbjct: 298 RKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGM 357
Query: 248 ANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCT 307
++ +L + R+ G P+ +T+ +M + + E+ LE++ +M+ +G D Y
Sbjct: 358 IDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNV 417
Query: 308 VVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA 356
V+ K G V EA + +M +NG+ P + ++ MI + QG + EA
Sbjct: 418 VIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEA 466
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 172/370 (46%), Gaps = 15/370 (4%)
Query: 106 SFDAGCEVLERMKEAGLTPDVIS---YNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVW 162
F A ++E M++ P++I + LM + + + D+M + + PD +
Sbjct: 146 QFGAVWGLIEEMRKT--NPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEY 203
Query: 163 SYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRN 222
+ L+ + G EA++VF+D + + P+ + ++ G C+ G + A +
Sbjct: 204 VFGCLLDALCKNGSVKEASKVFED--MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQ 261
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC-CFRCG 281
++ G P+++ + L++G A + +A L+++ R+ G EPN +T ++ C
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 282 RLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYN 341
R+++ + + EM G D Y +++ K G + + + + M GV P +Y
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 342 TMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
++ + ++ + +E LEL++++++ G D + ++I CK + EAV+ + M +
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 402 GFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSF------TYTILVHNLCRARRFL 455
G + +++G G + A F+ M R F T L++NL R + L
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDK-L 500
Query: 456 CASKHLVACL 465
+K + +C+
Sbjct: 501 EMAKDVWSCI 510
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 158/343 (46%), Gaps = 10/343 (2%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ ++CK + +A V D ++ P++ F +L+ +CR EVL +MKEAGL
Sbjct: 209 LDALCKNGSVKEASKVFED-MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGL 267
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP-DEAN 181
PD++ + +L+SG G + + M + P+V Y +L+ R DEA
Sbjct: 268 EPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAM 327
Query: 182 RVFKDV-LLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
RVF ++ E D TY +I+G CK G + S+ +++++G +P +TY ++
Sbjct: 328 RVFVEMERYGCEAD--IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMV 385
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
K + E L+ + + G P+ + + V+ + G +++ + + EM + G +
Sbjct: 386 AHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSP 445
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV--EPDLASYNTMIYLYFRQGRVDEALE 358
+ ++ G ++EA ++M+S G+ P + +++ R +++ A +
Sbjct: 446 GVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKD 505
Query: 359 LVDQIEKEGPGND--QYTHTIIIHGLCKAKRLNEAVQH-LDHM 398
+ I + + TI IH L + EA + LD M
Sbjct: 506 VWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMM 548
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 140/299 (46%), Gaps = 11/299 (3%)
Query: 61 ICIASMCKA-KQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
+ I ++C+ K++D+A V ++ + G D+VT+ LI +C++ D G VL+ M++
Sbjct: 311 VLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRK 370
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G+ P ++Y +M +K F L + +KM PD+ YN+++ +LG E
Sbjct: 371 KGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKE 430
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF--VPEVLTYNA 237
A R++ ++ + P T+ +MING G++ A + F+ + RG P+ T +
Sbjct: 431 AVRLWNEMEANG-LSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKS 489
Query: 238 LINGLCKARRANEARRLLS--EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
L+N L + + A+ + S + + E N +T ++ + G +++ +M
Sbjct: 490 LLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMME 549
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
Y ++ L K A EI E+++ E +++ +Y ++G D
Sbjct: 550 MDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREMS-----FKMYKKKGEED 603
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 134/309 (43%), Gaps = 14/309 (4%)
Query: 57 KFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLER 116
++ + C+ +L +A+ VL+ + G+ PD+V F L+ Y +++
Sbjct: 237 RYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMND 296
Query: 117 MKEAGLTPDVISYNSLMSGAVR-KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
M++ G P+V Y L+ R + + +F +M D+ +Y L+ + + G
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 176 MPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTY 235
M D+ V D + PS TY ++ K L + ++RRG P++L Y
Sbjct: 357 MIDKGYSVLDD-MRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIY 415
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
N +I CK EA RL +E G P TF ++N G L + EM S
Sbjct: 416 NVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVS 475
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEAD--EIAEQMMS------NGVEPDLASYNTMIYLY 347
+G F Y T+ + L +V D E+A+ + S + E +++++ I+
Sbjct: 476 RG-IFSAPQYGTLKSLL---NNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHAL 531
Query: 348 FRQGRVDEA 356
+ +G V EA
Sbjct: 532 YAKGHVKEA 540
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 116/272 (42%), Gaps = 34/272 (12%)
Query: 236 NALINGLCKARRANEARRLLSEFREAGHE-PNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
+++ L K R+ L+ E R+ E F +M +++ +E+L EM
Sbjct: 135 KSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMP 194
Query: 295 SKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
G D + + ++ AL K G V EA ++ E M P+L + +++Y + R+G++
Sbjct: 195 KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLM 253
Query: 355 EALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL 414
EA E++ Q+++ G D T ++ G A ++ +A ++ M GF N+ NC
Sbjct: 254 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV---NC-- 308
Query: 415 DGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRA-RRFLCASKHLVACLQCGFQVLK 473
YT+L+ LCR +R A + V + G +
Sbjct: 309 --------------------------YTVLIQALCRTEKRMDEAMRVFVEMERYGCEADI 342
Query: 474 ATRRAVIDGLISDGLKNEAKKVRLKIRKAQLL 505
T A+I G G+ ++ V +RK ++
Sbjct: 343 VTYTALISGFCKWGMIDKGYSVLDDMRKKGVM 374
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 145/312 (46%), Gaps = 39/312 (12%)
Query: 34 TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVK--LGVLPDV 91
T R+ +K++ + K T N + +CK K L +D ++ V PD+
Sbjct: 172 TGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL-HVVYEFVDEMRDDFDVKPDL 230
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
V+F LID C + ++ ++ AG PD YN++M G + ++ K
Sbjct: 231 VSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKK 290
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
M E + PD +YN L+ + G +EA R++ ++ A +P TATY ++NG+C+ G
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEA-RMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
ALS+ ++ RG P TYN L++GLCKAR
Sbjct: 350 ESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKAR------------------------- 384
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
+++G+E+ M+S G + Y T+V +LVK+G+V EA E+ + + +
Sbjct: 385 ----------LMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDS 434
Query: 332 GVEPDLASYNTM 343
D ++Y+T+
Sbjct: 435 KSLSDASAYSTL 446
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 149/303 (49%), Gaps = 8/303 (2%)
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
M+ + + PD + +I + G DEA + K+ L + P T TYN ++ LCK
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE-LTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 212 YVHNALSMFRNLQRRGF--VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
+H + F + R F P+++++ LI+ +C ++ EA L+S+ AG +P+
Sbjct: 209 DLH-VVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
+ T+M + + + + +M+ +G D Y T++ L K GRV EA + M+
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
G EPD A+Y +++ R+G AL L++++E G + T+ ++HGLCKA+ ++
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMD 387
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF----EGMEVRDSFTYTILV 445
+ ++ + M S G ++ L K+G + A + F + + D+ Y+ L
Sbjct: 388 KGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLE 447
Query: 446 HNL 448
L
Sbjct: 448 TTL 450
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 136/280 (48%), Gaps = 2/280 (0%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
V G+ PD VT + + + C D ++++ + E PD +YN L+ +
Sbjct: 151 VNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL 210
Query: 143 PMTLHMFDKMIES-EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYN 201
+ D+M + +++PD+ S+ IL+ EA + L +A P YN
Sbjct: 211 HVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK-LGNAGFKPDCFLYN 269
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
++ G C A+ +++ ++ G P+ +TYN LI GL KA R EAR L +A
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
G+EP+ T+T++MN R G L +L EM ++G + Y T++ L K + +
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKG 389
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
E+ E M S+GV+ + Y T++ + G+V EA E+ D
Sbjct: 390 MELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 169/340 (49%), Gaps = 14/340 (4%)
Query: 125 DVISYNSLMSGAVRKGLFPMTLHMFDKMIESE--IRPDVWSYNILMHCYFRLGMPDEA-- 180
D+ +NS++ + T+ +F +++S+ RP ++ IL+ R PD +
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACR--APDSSIS 141
Query: 181 --NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+RV +++++ +P T ++ + LC+ G V A + + L + P+ TYN L
Sbjct: 142 NVHRVL-NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFL 200
Query: 239 INGLCKARRANEARRLLSEFREAGH-EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
+ LCK + + + E R+ +P+ ++FT +++ L + + +++++ + G
Sbjct: 201 LKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
+ D F Y T++ + EA + ++M GVEPD +YNT+I+ + GRV+EA
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
+ + G D T+T +++G+C+ A+ L+ M + G N N +L GL
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL 380
Query: 418 GKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARR 453
KA +D+ ++ +E M+ +S Y LV +L ++ +
Sbjct: 381 CKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGK 420
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 89 PDVVTFNTLIDAYCRF--VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTL 146
P TF L+ CR S VL M GL PD ++ + + G
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 147 HMFDKMIESEIRPDVWSYNILM---------HCYFRLGMPDEANRVFKDVLLSAETDPST 197
+ ++ E PD ++YN L+ H + DE F + P
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFV--DEMRDDF-------DVKPDL 230
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
++ ++I+ +C + + A+ + L GF P+ YN ++ G C + +EA + +
Sbjct: 231 VSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKK 290
Query: 258 FREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGR 317
+E G EP+ IT+ T++ + GR+E+ L M GY D Y +++ + + G
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE 350
Query: 318 VVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI 377
+ A + E+M + G P+ +YNT+++ + +D+ +EL + ++ G + +
Sbjct: 351 SLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYAT 410
Query: 378 IIHGLCKAKRLNEAVQHLDH 397
++ L K+ ++ EA + D+
Sbjct: 411 LVRSLVKSGKVAEAYEVFDY 430
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 148/309 (47%), Gaps = 14/309 (4%)
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAET-DPSTATYNVMINGLCKN--- 210
S I D+ +N ++ Y + + ++ ++F+ +L S P +T+ ++++ C+
Sbjct: 79 SRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDS 138
Query: 211 --GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
VH L++ N G P+ +T + + LC+ R +EA+ L+ E E P+
Sbjct: 139 SISNVHRVLNLMVN---NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTY 195
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSK-GYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
T+ ++ +C L E + EMR D ++ ++ + + + EA + +
Sbjct: 196 TYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK 255
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
+ + G +PD YNT++ + + EA+ + ++++EG DQ T+ +I GL KA R
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTI 443
+ EA +L M G+ + +++G+ + G AL E ME R + TY
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNT 375
Query: 444 LVHNLCRAR 452
L+H LC+AR
Sbjct: 376 LLHGLCKAR 384
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 122/289 (42%), Gaps = 10/289 (3%)
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTY-NALINGLCKARRANEARRLLSEF--REAGHEP 265
K+ + +A S+F ++ +P L + N+++ N+ +L + P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 266 NAITFTTVMNCCFRC--GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
TF +++ R + +L M + G D V +L +TGRV EA +
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE-GPGNDQYTHTIIIHGL 382
+ +++ PD +YN ++ + + E VD++ + D + TI+I +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DS 438
C +K L EA+ + + + GF + N ++ G A+ ++ M+ D
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 439 FTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
TY L+ L +A R A +L + G++ AT ++++G+ G
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 152/327 (46%), Gaps = 37/327 (11%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ ++ +AKQ + +L + V+ G P+ VT+N LI +Y R V +M+EAG
Sbjct: 366 VGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGC 425
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PD ++Y +L+ + G + + M+ +M E+ + PD
Sbjct: 426 EPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPD---------------------- 463
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
T TY+V+IN L K G++ A +F + +G P ++T+N +I
Sbjct: 464 --------------TFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALH 509
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
KAR A +L + + AG +P+ +T++ VM CG LE+ + EM+ K + D
Sbjct: 510 AKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDE 569
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
Y +V K G V +A + + M+ G+ P++ + N+++ + R R+ EA L+
Sbjct: 570 PVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQS 629
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLN 389
+ G T+T+++ C R N
Sbjct: 630 MLALGLHPSLQTYTLLL-SCCTDARSN 655
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 131/286 (45%), Gaps = 1/286 (0%)
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
++ G D +Y +++ R F + D+M+ +P+ +YN L+H Y R
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
EA VF + A +P TY +I+ K G++ A+ M++ +Q G P+ TY+
Sbjct: 411 KEAMNVFNQ-MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSV 469
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
+IN L KA A RL E G PN +TF ++ + E L++ +M++ G
Sbjct: 470 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG 529
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
+ D Y V+ L G + EA+ + +M PD Y ++ L+ + G VD+A
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
+ + + G + T ++ + R++EA L M +LG
Sbjct: 590 QWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL 635
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 116/235 (49%)
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
TY M+ L + + + R G P +TYN LI+ +A EA + ++
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
+EAG EP+ +T+ T+++ + G L+ +++ M+ G + D F Y ++ L K G +
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
A + +M+ G P+L ++N MI L+ + + AL+L ++ G D+ T++I+
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
+ L L EA M + + ++D GKAG++D+A ++++ M
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM 595
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I S +A L +A V + G PD VT+ TLID + + D ++ +RM+E
Sbjct: 398 NRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQE 457
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
AGL+PD +Y+ +++ + G P +F +M+ P++ ++NI++ + + +
Sbjct: 458 AGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYET 517
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A ++++D + +A P TY++++ L G++ A +F +QR+ +VP+ Y L+
Sbjct: 518 ALKLYRD-MQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLV 576
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
+ KA ++A + +AG PN T ++++ R R+ + +L M + G
Sbjct: 577 DLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALG 634
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 5/261 (1%)
Query: 215 NALSMFRNLQRR-GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
NAL F L+R+ GF + TY ++ L +A++ E +LL E G +PN +T+ +
Sbjct: 341 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRL 400
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
++ R L++ + + +M+ G D YCT++ K G + A ++ ++M G+
Sbjct: 401 IHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL 460
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
PD +Y+ +I + G + A L ++ +G + T I+I KA+ A++
Sbjct: 461 SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 520
Query: 394 HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLC 449
M + GF + V + V++ LG G ++ A F M+ V D Y +LV
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 450 RARRFLCASKHLVACLQCGFQ 470
+A A + A LQ G +
Sbjct: 581 KAGNVDKAWQWYQAMLQAGLR 601
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 129/278 (46%), Gaps = 5/278 (1%)
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
E N++ D ++ P+T TYN +I+ + Y+ A+++F +Q G P+ +TY L
Sbjct: 377 EINKLL-DEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTL 435
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I+ KA + A + +EAG P+ T++ ++NC + G L + EM +G
Sbjct: 436 IDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGC 495
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
T + + ++A K A ++ M + G +PD +Y+ ++ + G ++EA
Sbjct: 496 TPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEG 555
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
+ +++++ D+ + +++ KA +++A Q M G N+ N +L
Sbjct: 556 VFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFL 615
Query: 419 KAGHIDRALKFFEGM---EVRDSF-TYTILVHNLCRAR 452
+ + A + M + S TYT+L+ AR
Sbjct: 616 RVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDAR 653
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 105/216 (48%), Gaps = 4/216 (1%)
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
R G+ DG Y T+V L + + E +++ ++M+ +G +P+ +YN +I+ Y R +
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
EA+ + +Q+++ G D+ T+ +I KA L+ A+ M G + + +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 414 LDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGF 469
++ LGKAGH+ A + F M + T+ I++ +AR + A K GF
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 470 QVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQLL 505
Q K T V++ L G EA+ V ++++ +
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 566
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 36/232 (15%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
R+ G S T ++ I + KA L A + + V G P++VTFN +I + +
Sbjct: 454 RMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKAR 513
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
+++ ++ M+ AG PD ++Y+ +M
Sbjct: 514 NYETALKLYRDMQNAGFQPDKVTYSIVM-------------------------------E 542
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
+L HC G +EA VF + + P Y ++++ K G V A ++ + +
Sbjct: 543 VLGHC----GFLEEAEGVFAE-MQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCC 277
G P V T N+L++ + R +EA LL G P+ T+T +++CC
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCC 649
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 163/340 (47%), Gaps = 13/340 (3%)
Query: 63 IASMCKAKQLDKAECV------LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLER 116
I + C+A+++D A LIDG P+V +NT+++ Y + D +R
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGK-----PNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
M + PDV ++N L++G R F + L +F +M E P+V S+N L+ + G
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYN 236
+E ++ + ++ S AT ++++GLC+ G V +A + +L + +P Y
Sbjct: 279 IEEGVKMAYE-MIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 237 ALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
+L+ LC +A A ++ E + G P I TT++ + GR E+ + +M +
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA 356
G D + ++ L + +A+ + S G EPD +Y+ ++ + ++GR E
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457
Query: 357 LELVDQIEKEGPGNDQYTHTIIIHGL-CKAKRLNEAVQHL 395
LV+++ + D +T+ ++ GL C K + V+ L
Sbjct: 458 EVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQVRML 497
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 152/333 (45%), Gaps = 2/333 (0%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKE-AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
F + IDAYCR D + MK P+V YN++++G V+ G L + +M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
+ +PDV ++NIL++ Y R D A +F++ + +P+ ++N +I G +G
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFRE-MKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
+ + M + G T L++GLC+ R ++A L+ + P+ + +
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
++ + + +E++ E+ KG T A T+V L K+GR +A E+MM+ G
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
+ PD ++N ++ +A L +G D+ T+ +++ G K R E
Sbjct: 399 ILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGE 458
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDR 425
++ M ++ N ++DGL G R
Sbjct: 459 VLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 129/264 (48%), Gaps = 6/264 (2%)
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
P+ YN ++NG K+G + AL ++ + + P+V T+N LING C++ + + A L
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 255 LSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK 314
E +E G EPN ++F T++ G++E+G+++ EM G F +V L +
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 315 TGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYT 374
GRV +A + +++ V P Y +++ + + A+E+++++ K+G
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 375 HTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHID-----RALKF 429
T ++ GL K+ R +A ++ M + G + V N +L L + H R L
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLAS 430
Query: 430 FEGMEVRDSFTYTILVHNLCRARR 453
+G E D TY +LV + R
Sbjct: 431 SKGYEP-DETTYHVLVSGFTKEGR 453
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 140/295 (47%), Gaps = 5/295 (1%)
Query: 204 INGLCKNGYVHNALSMFRNLQRR-GFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
I+ C+ + AL F ++R P V YN ++NG K+ ++A R +
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKER 223
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
+P+ TF ++N R + + L++ EM+ KG + ++ T++ + +G++ E
Sbjct: 224 AKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGV 283
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
++A +M+ G A+ ++ R+GRVD+A LV + + ++ + ++ L
Sbjct: 284 KMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKL 343
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDS 438
C + A++ ++ + G +A +++GL K+G ++A F E M + DS
Sbjct: 344 CGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDS 403
Query: 439 FTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAK 493
T+ +L+ +LC + A++ + G++ + T ++ G +G + E +
Sbjct: 404 VTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGE 458
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 119/288 (41%), Gaps = 40/288 (13%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
NI I C++ + D A + + + G P+VV+FNTLI +
Sbjct: 231 FNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGF----------------- 273
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
L SG + +G + M +MIE R + IL+ R G D
Sbjct: 274 -------------LSSGKIEEG-----VKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+A + D LL+ PS Y ++ LC A+ M L ++G P + L
Sbjct: 316 DACGLVLD-LLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTL 374
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN--CCFRCGRLEQGLEILTEMRSK 296
+ GL K+ R +A + + AG P+++TF ++ C L +L SK
Sbjct: 375 VEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLAS--SK 432
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
GY D Y +V+ K GR E + + +M+ + PD+ +YN ++
Sbjct: 433 GYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 112/239 (46%), Gaps = 3/239 (1%)
Query: 19 HPAILNHENPITSFLTQ-RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAEC 77
P +++ I FL+ +I + + ++ G S I + +C+ ++D A
Sbjct: 260 EPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACG 319
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
+++D + VLP + +L++ C E++E + + G TP I+ +L+ G
Sbjct: 320 LVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLR 379
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
+ G +KM+ + I PD ++N+L+ +ANR+ + + S +P
Sbjct: 380 KSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRL-RLLASSKGYEPDE 438
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL-CKARRANEARRLL 255
TY+V+++G K G + + + +P++ TYN L++GL C + + + R+L
Sbjct: 439 TTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQVRML 497
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 177/374 (47%), Gaps = 28/374 (7%)
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERM---KEAGL-TPDVISYNSLMSGAVRKGLFPMTLHM 148
T+N ++D + +FD E++ M +E+ L T D +S +M + G + +
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMS--KVMRRLAKSGKYNKAVDA 225
Query: 149 FDKMIESE-IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
F +M +S ++ D + N LM + + A+ VF + L P T+N++I+G
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF--LKLFDTIKPDARTFNILIHGF 283
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKA---RRANEARRLLSEFREAGHE 264
CK +A +M ++ F P+V+TY + + CK RR NE +L E RE G
Sbjct: 284 CKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNE---MLEEMRENGCN 340
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
PN +T+T VM+ + ++ + L + +M+ G D Y +++ L KTGR +A EI
Sbjct: 341 PNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEI 400
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE-----GPGNDQYTHTIII 379
E M + GV D+ YNTMI R + AL L+ ++E E P + Y + +
Sbjct: 401 FEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKM 460
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE-----GME 434
K +L + H HM ++ ++ GL +G ++ A FFE GM
Sbjct: 461 CCHKKKMKLLGILLH--HMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMV 518
Query: 435 VRDSFTYTILVHNL 448
RDS T +LV L
Sbjct: 519 PRDS-TCKMLVDEL 531
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 11/291 (3%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECV---LIDGVKLGVLPDVVTFNTLIDAYCRFVSF 107
G T +N + ++ K ++ A V L D +K PD TFN LI +C+ F
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK----PDARTFNILIHGFCKARKF 289
Query: 108 DAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNIL 167
D +++ MK TPDV++Y S + ++G F M ++M E+ P+V +Y I+
Sbjct: 290 DDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIV 349
Query: 168 MHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRG 227
MH + EA V++ + P Y+ +I+ L K G +A +F ++ +G
Sbjct: 350 MHSLGKSKQVAEALGVYEKMKEDGCV-PDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Query: 228 FVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE---PNAITFTTVMNCCFRCGRLE 284
+VL YN +I+ R A RLL + E PN T+ ++ C +++
Sbjct: 409 VRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMK 468
Query: 285 QGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
+L M + D Y ++ L +G+V EA E+ + G+ P
Sbjct: 469 LLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 116/241 (48%), Gaps = 10/241 (4%)
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT---VMNCCFRCGRL 283
G+V TYNA+++ L K R + L++E + E +T T VM + G+
Sbjct: 161 GYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNK-NEESKLVTLDTMSKVMRRLAKSGKY 219
Query: 284 EQGLEILTEM-RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
+ ++ EM +S G D A +++ ALVK + A E+ ++ + ++PD ++N
Sbjct: 220 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF-DTIKPDARTFNI 278
Query: 343 MIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
+I+ + + + D+A ++D ++ D T+T + CK + L+ M G
Sbjct: 279 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG 338
Query: 403 FGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCAS 458
N+V V+ LGK+ + AL +E M+ V D+ Y+ L+H L + RF A+
Sbjct: 339 CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAA 398
Query: 459 K 459
+
Sbjct: 399 E 399
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 100/271 (36%), Gaps = 74/271 (27%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVL-PDVVTFNTLIDAYCRFVSF---------- 107
NI I CKA++ D A ++D +K+ PDVVT+ + ++AYC+ F
Sbjct: 276 FNILIHGFCKARKFDDARA-MMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
Query: 108 -DAGCE------------------------VLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
+ GC V E+MKE G PD Y+SL+ + G F
Sbjct: 335 RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRF 394
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV--------------- 187
+F+ M +R DV YN ++ + A R+ K +
Sbjct: 395 KDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETY 454
Query: 188 ----------------------LLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
++ + +TY ++I GLC +G V A F R
Sbjct: 455 APLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVR 514
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLS 256
+G VP T L++ L K A ++ S
Sbjct: 515 KGMVPRDSTCKMLVDELEKKNMAEAKLKIQS 545
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 170/367 (46%), Gaps = 2/367 (0%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
I I+ + + LDK V + GV V ++ LI+AY R ++ E+L+RMK
Sbjct: 146 IMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNE 205
Query: 121 GLTPDVISYNSLMSGAVRKGL-FPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
++P +++YN++++ R GL + L +F +M I+PD+ +YN L+ G+ DE
Sbjct: 206 KISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDE 265
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A VF+ + P TY+ ++ K + + + G +P++ +YN L+
Sbjct: 266 AEMVFR-TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
K+ EA + + + AG PNA T++ ++N + GR + ++ EM+S
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTD 384
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D Y ++ + G E + M+ +EPD+ +Y +I+ + G ++A ++
Sbjct: 385 PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKI 444
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
+ + +T +I +A EA+ + M+ +G ++ + +L +
Sbjct: 445 LQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFAR 504
Query: 420 AGHIDRA 426
G + +
Sbjct: 505 GGLVKES 511
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 162/337 (48%), Gaps = 2/337 (0%)
Query: 65 SMCKAKQL-DKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLT 123
S C + L D+AE V G++PD+ T++ L++ + + + C++L M G
Sbjct: 255 SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 314
Query: 124 PDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRV 183
PD+ SYN L+ + G + +F +M + P+ +Y++L++ + + G D+ ++
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 184 FKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLC 243
F + + S+ TDP ATYN++I + GY +++F ++ P++ TY +I
Sbjct: 375 FLE-MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACG 433
Query: 244 KARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGF 303
K +AR++L P++ +T V+ + E+ L M G
Sbjct: 434 KGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIE 493
Query: 304 AYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQI 363
+ +++ + + G V E++ I +++ +G+ + ++N I Y + G+ +EA++ +
Sbjct: 494 TFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDM 553
Query: 364 EKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNS 400
EK D+ T ++ A+ ++E + + M +
Sbjct: 554 EKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKA 590
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 180/419 (42%), Gaps = 4/419 (0%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
P+ + +I R D EV + M G++ V SY +L++ R G + +L +
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
D+M +I P + +YN +++ R G+ E + P TYN +++
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
G A +FR + G VP++ TY+ L+ K RR + LL E G P+
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
++ ++ + G +++ + + +M++ G T + Y ++ ++GR + ++ +M
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
S+ +PD A+YN +I ++ G E + L + +E D T+ II K
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDS----FTYTIL 444
+A + L +M + + A V++ G+A + AL F M S T+ L
Sbjct: 439 EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Query: 445 VHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQ 503
+++ R + L + G + T A I+ G EA K + + K++
Sbjct: 499 LYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/490 (20%), Positives = 198/490 (40%), Gaps = 49/490 (10%)
Query: 19 HPAILNHENPITSFLTQRITHSKNVTFRIMVKGRSLS--TKFLNICIASMCKAKQLDKAE 76
P I+ + +++ + + + FR M G + T + ++ + + K ++L+K
Sbjct: 244 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHL-VETFGKLRRLEKVC 302
Query: 77 CVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTP------------ 124
+L + G LPD+ ++N L++AY + S V +M+ AG TP
Sbjct: 303 DLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362
Query: 125 -----------------------DVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDV 161
D +YN L+ G F + +F M+E I PD+
Sbjct: 363 GQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422
Query: 162 WSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFR 221
+Y ++ + G+ ++A ++ + + + + PS+ Y +I + AL F
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQ-YMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFN 481
Query: 222 NLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCG 281
+ G P + T+++L+ + E+ +LS ++G N TF + + G
Sbjct: 482 TMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGG 541
Query: 282 RLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYN 341
+ E+ ++ +M D V++ V E E E+M ++ + P + Y
Sbjct: 542 KFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYC 601
Query: 342 TMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQH-LDHMNS 400
M+ +Y + R D+ EL++++ N +I G + V++ LD +NS
Sbjct: 602 MMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNS 661
Query: 401 LGFGFNLVASNCVLDGLGKAGHIDRALK---------FFEGMEVRDSFTYTILVHNLCRA 451
G G + N +LD L G +RA + F + ++ +++ VH +
Sbjct: 662 EGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEG 721
Query: 452 RRFLCASKHL 461
+ S L
Sbjct: 722 GMYTALSVWL 731
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 127/270 (47%), Gaps = 5/270 (1%)
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
R+FK + P+ Y +MI+ L + G + L +F + +G V +Y ALIN
Sbjct: 126 RLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINA 185
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG-LEILTEMRSKGYTF 300
+ R + LL + P+ +T+ TV+N C R G +G L + EMR +G
Sbjct: 186 YGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQP 245
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
D Y T+++A G EA+ + M G+ PDL +Y+ ++ + + R+++ +L+
Sbjct: 246 DIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLL 305
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
++ G D ++ +++ K+ + EA+ M + G N + +L+ G++
Sbjct: 306 GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQS 365
Query: 421 GHIDRALKFFEGMEVR----DSFTYTILVH 446
G D + F M+ D+ TY IL+
Sbjct: 366 GRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 161/351 (45%), Gaps = 3/351 (0%)
Query: 55 STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVL 114
+T NI C + + L + G PD+VT+NTL+ +YCR +
Sbjct: 235 NTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLY 294
Query: 115 ERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRL 174
+ M + PD+++Y SL+ G + G F +M++ I+PD SYN L++ Y +
Sbjct: 295 KIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKE 354
Query: 175 GMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLT 234
GM ++ ++ + +L P T V++ G + G + +A++ L+R
Sbjct: 355 GMMQQSKKLLHE-MLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEV 413
Query: 235 YNALINGLCKARRANEARRLLSEF-REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
+ LI LC+ + A+ LL E GHE T+ ++ RC +E+ L + ++
Sbjct: 414 CDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKL 473
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
+++ D Y ++ L + GR EA+ + +M + V+PD ++Y Y ++
Sbjct: 474 KNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDF 533
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK-RLNEAVQHLDHMNSLGF 403
D+A L+ E D ++ ++ +C+ +A++ + M LGF
Sbjct: 534 DKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGF 584
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 186/403 (46%), Gaps = 30/403 (7%)
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE------------------SEIRPD 160
+ G P+V +Y L+ V FP+ + ++IE E D
Sbjct: 106 DLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWD 165
Query: 161 VWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMF 220
+++L+ Y +LG+ +E RVF++VL S + S T N ++NGL K + + ++
Sbjct: 166 PVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFS-VSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 221 RNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRC 280
+ R G P T+N L N C E L + E G EP+ +T+ T+++ R
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 281 GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASY 340
GRL++ + M + D Y +++ L K GRV EA + +M+ G++PD SY
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 341 NTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNS 400
NT+IY Y ++G + ++ +L+ ++ D++T +I+ G + RL AV + +
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 401 LGFGFNLVASNCVLDGLGKAGH-------IDRALKFFEGMEVRDSFTYTILVHNLCRARR 453
L + ++ L + G +DR ++ EG E + TY L+ +L R
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIE-EEGHEAKPE-TYNNLIESLSRCDA 462
Query: 454 FLCASKHLVACLQCGFQVLKA-TRRAVIDGLISDGLKNEAKKV 495
+ + L L+ QVL A T RA+I L G EA+ +
Sbjct: 463 -IEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESL 504
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 171/380 (45%), Gaps = 12/380 (3%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D V F+ L+ Y + + G V + ++G + V++ N L++G ++ L ++
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAET---DPSTATYNVMING 206
M I P+ +++NIL + + D R D L E +P TYN +++
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCN----DSNFREVDDFLEKMEEEGFEPDLVTYNTLVSS 280
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
C+ G + A +++ + RR VP+++TY +LI GLCK R EA + + G +P+
Sbjct: 281 YCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPD 340
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
+++ T++ + G ++Q ++L EM D F +V V+ GR++ A
Sbjct: 341 CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVV 400
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ-IEKEGPGNDQYTHTIIIHGLCKA 385
++ V+ + +I ++G+ A L+D+ IE+EG T+ +I L +
Sbjct: 401 ELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRC 460
Query: 386 KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM---EVR-DSFTY 441
+ EA+ + + + ++ L + G A M EV+ DSF
Sbjct: 461 DAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFIC 520
Query: 442 TILVHNLCRARRFLCASKHL 461
LV+ C+ F A + L
Sbjct: 521 GALVYGYCKELDFDKAERLL 540
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 111/271 (40%), Gaps = 13/271 (4%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
R+ + R++ +G N I + CK + +++ +L + + V+PD T
Sbjct: 321 RVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCK 380
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
+++ + R + + ++ + + L+ ++G H+ D++IE
Sbjct: 381 VIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEE 440
Query: 156 ---EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
E +P+ +YN L+ R +EA V K L + TY +I LC+ G
Sbjct: 441 EGHEAKPE--TYNNLIESLSRCDAIEEA-LVLKGKLKNQNQVLDAKTYRALIGCLCRIGR 497
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS----EFREAGHEPNAI 268
A S+ + P+ AL+ G CK ++A RLLS EFR +P +
Sbjct: 498 NREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFR--IFDPESY 555
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
C CG ++ LE+ M+ G+
Sbjct: 556 NSLVKAVCETGCG-YKKALELQERMQRLGFV 585
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
T+N LI++ R + + + ++K D +Y +L+ R G + +M
Sbjct: 449 TYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEM 508
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAET---DPSTATYNVMINGLCK 209
+SE++PD + L++ Y + D+A R+ L + E DP + YN ++ +C+
Sbjct: 509 FDSEVKPDSFICGALVYGYCKELDFDKAERLLS--LFAMEFRIFDPES--YNSLVKAVCE 564
Query: 210 NGYVHN-ALSMFRNLQRRGFVPEVLTYNALINGL 242
G + AL + +QR GFVP LT LI L
Sbjct: 565 TGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 158/356 (44%), Gaps = 11/356 (3%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG +T N I S+ K KQ K L+D +K L TF + Y R
Sbjct: 122 KGFKHTTSNYNALIESLGKIKQF-KLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 180
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
+M+E G + +N ++ + +FDKM + PD+ SY IL+
Sbjct: 181 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 240
Query: 170 CY---FRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
+ L DE NR KD +P Y ++IN CK A+ F +++R
Sbjct: 241 GWGQELNLLRVDEVNREMKDEGF----EPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQR 296
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
P + +LINGL ++ N+A + +G A T+ ++ R+E
Sbjct: 297 NCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDA 356
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
+ + EMR KG + Y ++ L++ R EA E+ + M EP +++Y M+ +
Sbjct: 357 YKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRM 413
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
+ + R+D A+++ D+++ +G + + +I LC +L+EA ++ + M +G
Sbjct: 414 FCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG 469
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 33/304 (10%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
FN ++D + + +V ++MK+ PD+ SY L+ G ++ + +M
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMK 259
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
+ PDV +Y I+++ + + +EA R F + + PS + +INGL +
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE-MEQRNCKPSPHIFCSLINGLGSEKKL 318
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
++AL F + GF E TYNAL+ C ++R +A + + E R G PNA T+ +
Sbjct: 319 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378
Query: 274 MNCCFR------------------------------CG--RLEQGLEILTEMRSKGYTFD 301
++ R C RL+ ++I EM+ KG
Sbjct: 379 LHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPG 438
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
+ +++ AL ++ EA E +M+ G+ P ++ + +GR D+ +LV
Sbjct: 439 MHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVV 498
Query: 362 QIEK 365
++++
Sbjct: 499 KMDR 502
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 121/262 (46%), Gaps = 5/262 (1%)
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
+T+ YN +I L K S+ +++ + + + T+ + +AR+ EA
Sbjct: 127 TTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAF 185
Query: 256 SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT 315
+ E G + + F +++ + + ++ +M+ K + D +Y ++ +
Sbjct: 186 HKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQE 245
Query: 316 GRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTH 375
++ DE+ +M G EPD+ +Y +I + + + +EA+ +++E+ +
Sbjct: 246 LNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIF 305
Query: 376 TIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEV 435
+I+GL K+LN+A++ + S GF N ++ + ++ A K + M +
Sbjct: 306 CSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRL 365
Query: 436 R----DSFTYTILVHNLCRARR 453
+ ++ TY I++H+L R +R
Sbjct: 366 KGVGPNARTYDIILHHLIRMQR 387
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 104/233 (44%), Gaps = 4/233 (1%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
I I + CKAK+ ++A + + P F +LI+ + E ER K +
Sbjct: 272 IIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSS 331
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
G + +YN+L+ D+M + P+ +Y+I++H R+ EA
Sbjct: 332 GFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEA 391
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
V++ + +P+ +TY +M+ C + A+ ++ ++ +G +P + +++LI
Sbjct: 392 YEVYQ----TMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLIT 447
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
LC + +EA +E + G P F+ + GR ++ +++ +M
Sbjct: 448 ALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 170/357 (47%), Gaps = 7/357 (1%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
+ I + K + AE VL K+G P+V+++ L+++Y R + + RM+ +
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE---SEIRPDVWSYNILMHCYFRLGMP 177
G P I+Y ++ V F +F+ +++ S ++PD Y+++++ Y + G
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
++A +VF ++ ST TYN +++ + Y ++ +QR P+V++Y
Sbjct: 271 EKARKVFSS-MVGKGVPQSTVTYNSLMS--FETSY-KEVSKIYDQMQRSDIQPDVVSYAL 326
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LI +ARR EA + E +AG P + +++ G +EQ + MR
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
D ++Y T+++A V + A++ +++ +G EP++ +Y T+I Y + V++ +
Sbjct: 387 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 446
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL 414
E+ +++ G +Q T I+ + K A+ M S G + A N +L
Sbjct: 447 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 503
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 152/318 (47%), Gaps = 7/318 (2%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECV---LIDGVKLGVLPDVVTFNTLIDAYC 102
R+ G S I + + + + +AE V L+D K + PD ++ +I Y
Sbjct: 206 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 265
Query: 103 RFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVW 162
+ +++ +V M G+ ++YNSLMS + ++D+M S+I+PDV
Sbjct: 266 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVV 322
Query: 163 SYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRN 222
SY +L+ Y R +EA VF++ +L A P+ YN++++ +G V A ++F++
Sbjct: 323 SYALLIKAYGRARREEEALSVFEE-MLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 381
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
++R P++ +Y +++ A A + + G EPN +T+ T++ +
Sbjct: 382 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 441
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
+E+ +E+ +MR G + T++ A + A ++M S GV PD + N
Sbjct: 442 VEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNV 501
Query: 343 MIYLYFRQGRVDEALELV 360
++ L Q ++EA EL
Sbjct: 502 LLSLASTQDELEEAKELT 519
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 174/381 (45%), Gaps = 9/381 (2%)
Query: 60 NICIASMCKAKQLDKAECV--LIDGVKLGVLPDV--VTFNTLIDAYCRFVSFDAGCEVLE 115
++ + ++ + KQL K V +++ ++ + + F LI AY + +F+ VL
Sbjct: 111 DLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLS 170
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
+ + G TP+VISY +LM R G +F +M S P +Y I++ +
Sbjct: 171 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 230
Query: 176 MPDEANRVFKDVLLSAET--DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
EA VF+ +L ++ P Y++MI K G A +F ++ +G +
Sbjct: 231 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 234 TYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
TYN+L++ + E ++ + + + +P+ +++ ++ R R E+ L + EM
Sbjct: 291 TYNSLMSFETSYK---EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 347
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
G AY ++ A +G V +A + + M + + PDL SY TM+ Y +
Sbjct: 348 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 407
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
+ A + +I+ +G + T+ +I G KA + + ++ + M G N +
Sbjct: 408 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 467
Query: 414 LDGLGKAGHIDRALKFFEGME 434
+D G+ + AL +++ ME
Sbjct: 468 MDASGRCKNFGSALGWYKEME 488
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 10/289 (3%)
Query: 57 KFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLER 116
K ++ I KA +KA V V GV VT+N+L+ S+ ++ ++
Sbjct: 255 KMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET---SYKEVSKIYDQ 311
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
M+ + + PDV+SY L+ R L +F++M+++ +RP +YNIL+ + GM
Sbjct: 312 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 371
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYN 236
++A VFK + P +Y M++ + A F+ ++ GF P ++TY
Sbjct: 372 VEQAKTVFKS-MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 430
Query: 237 ALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
LI G KA + + + R +G + N TT+M+ RC L EM S
Sbjct: 431 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESC 490
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIY 345
G D A V+ +L T DE+ E G+ + A+ +Y
Sbjct: 491 GVPPDQKA-KNVLLSLAST-----QDELEEAKELTGIRNETATIIARVY 533
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 119/288 (41%), Gaps = 10/288 (3%)
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
++I K G + A + L + G P V++Y AL+ + + N A + + +
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 262 GHEPNAITFTTVMNCCFRCGRL---EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
G EP+AIT+ ++ + E+ E L + + D Y ++ K G
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
+A ++ M+ GV +YN+++ + E ++ DQ+++ D ++ ++
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALL 327
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME---- 434
I +A+R EA+ + M G A N +LD +G +++A F+ M
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 435 VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDG 482
D ++YT ++ A A K GF+ T +I G
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 435
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 147/297 (49%), Gaps = 5/297 (1%)
Query: 158 RPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNAL 217
+PD +YNIL+H + G D+A ++F D ++ + P+ T+ +I+GLCK+ V AL
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLF-DEMVKKKVKPTGVTFGTLIHGLCKDSRVKEAL 207
Query: 218 SMFRN-LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC 276
M + L+ G P V Y +LI LC+ + A +L E E + +A ++T+++
Sbjct: 208 KMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 277 CFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPD 336
+ GR + IL EM KG D Y ++ A+ + ++M+ G++PD
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 337 LASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLD 396
+ SYN ++ ++FR + +EA L + + + G D ++ I+ GLC+ + EA LD
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILD 387
Query: 397 HMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME---VRDSFTYTILVHNLCR 450
M G+ L L ++G ++ K + D+ +++++ +C+
Sbjct: 388 EMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCK 444
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 2/173 (1%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG T N+ I C + A VL + V+ G+ PDV+++N ++ + R ++
Sbjct: 287 KGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEE 346
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
+ E M G +PD +SY + G F + D+M+ +P +
Sbjct: 347 ATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQ 406
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRN 222
G + ++V + D ++VMI +CK + +++ + N
Sbjct: 407 KLCESGKLEILSKVISSLHRGIAGD--ADVWSVMIPTMCKEPVISDSIDLLLN 457
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 170/357 (47%), Gaps = 7/357 (1%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
+ I + K + AE VL K+G P+V+++ L+++Y R + + RM+ +
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE---SEIRPDVWSYNILMHCYFRLGMP 177
G P I+Y ++ V F +F+ +++ S ++PD Y+++++ Y + G
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
++A +VF ++ ST TYN +++ + Y ++ +QR P+V++Y
Sbjct: 264 EKARKVFSS-MVGKGVPQSTVTYNSLMS--FETSY-KEVSKIYDQMQRSDIQPDVVSYAL 319
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LI +ARR EA + E +AG P + +++ G +EQ + MR
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
D ++Y T+++A V + A++ +++ +G EP++ +Y T+I Y + V++ +
Sbjct: 380 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 439
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL 414
E+ +++ G +Q T I+ + K A+ M S G + A N +L
Sbjct: 440 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 496
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 152/318 (47%), Gaps = 7/318 (2%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECV---LIDGVKLGVLPDVVTFNTLIDAYC 102
R+ G S I + + + + +AE V L+D K + PD ++ +I Y
Sbjct: 199 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 258
Query: 103 RFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVW 162
+ +++ +V M G+ ++YNSLMS + ++D+M S+I+PDV
Sbjct: 259 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVV 315
Query: 163 SYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRN 222
SY +L+ Y R +EA VF++ +L A P+ YN++++ +G V A ++F++
Sbjct: 316 SYALLIKAYGRARREEEALSVFEE-MLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 374
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
++R P++ +Y +++ A A + + G EPN +T+ T++ +
Sbjct: 375 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 434
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
+E+ +E+ +MR G + T++ A + A ++M S GV PD + N
Sbjct: 435 VEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNV 494
Query: 343 MIYLYFRQGRVDEALELV 360
++ L Q ++EA EL
Sbjct: 495 LLSLASTQDELEEAKELT 512
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 174/381 (45%), Gaps = 9/381 (2%)
Query: 60 NICIASMCKAKQLDKAECV--LIDGVKLGVLPDV--VTFNTLIDAYCRFVSFDAGCEVLE 115
++ + ++ + KQL K V +++ ++ + + F LI AY + +F+ VL
Sbjct: 104 DLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLS 163
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
+ + G TP+VISY +LM R G +F +M S P +Y I++ +
Sbjct: 164 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 223
Query: 176 MPDEANRVFKDVLLSAET--DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
EA VF+ +L ++ P Y++MI K G A +F ++ +G +
Sbjct: 224 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 234 TYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
TYN+L++ + E ++ + + + +P+ +++ ++ R R E+ L + EM
Sbjct: 284 TYNSLMSFETSYK---EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 340
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
G AY ++ A +G V +A + + M + + PDL SY TM+ Y +
Sbjct: 341 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 400
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
+ A + +I+ +G + T+ +I G KA + + ++ + M G N +
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 460
Query: 414 LDGLGKAGHIDRALKFFEGME 434
+D G+ + AL +++ ME
Sbjct: 461 MDASGRCKNFGSALGWYKEME 481
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 10/289 (3%)
Query: 57 KFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLER 116
K ++ I KA +KA V V GV VT+N+L+ S+ ++ ++
Sbjct: 248 KMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET---SYKEVSKIYDQ 304
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
M+ + + PDV+SY L+ R L +F++M+++ +RP +YNIL+ + GM
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 364
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYN 236
++A VFK + P +Y M++ + A F+ ++ GF P ++TY
Sbjct: 365 VEQAKTVFKS-MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 423
Query: 237 ALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
LI G KA + + + R +G + N TT+M+ RC L EM S
Sbjct: 424 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESC 483
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIY 345
G D A V+ +L T DE+ E G+ + A+ +Y
Sbjct: 484 GVPPDQKA-KNVLLSLAST-----QDELEEAKELTGIRNETATIIARVY 526
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 119/288 (41%), Gaps = 10/288 (3%)
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
++I K G + A + L + G P V++Y AL+ + + N A + + +
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 262 GHEPNAITFTTVMNCCFRCGRL---EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
G EP+AIT+ ++ + E+ E L + + D Y ++ K G
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
+A ++ M+ GV +YN+++ + E ++ DQ+++ D ++ ++
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME---- 434
I +A+R EA+ + M G A N +LD +G +++A F+ M
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 435 VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDG 482
D ++YT ++ A A K GF+ T +I G
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 428
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 190/448 (42%), Gaps = 33/448 (7%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT 96
+T + + R++ + L N I K LDK + +K GV +V T++
Sbjct: 288 MTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHI 347
Query: 97 LIDAYCRFVSFDAGCEV-LERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
+I +YC+ + D + + ++ +V Y +L+ G +KG + + +M+++
Sbjct: 348 MIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDN 407
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLS------------------------- 190
I PD +Y +L+ + A + + +L +
Sbjct: 408 GIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGE 467
Query: 191 -AETDPSTATYN--VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARR 247
A D + A V+ LC ALS + G P +YN++I L +
Sbjct: 468 IARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENI 527
Query: 248 ANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCT 307
+ L++ +E P+ T+ V+N + + I+ M G Y +
Sbjct: 528 IEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSS 587
Query: 308 VVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
++ +L K GRVVEA+E +M+ +G++PD +Y MI Y R GR+DEA ELV+++ K
Sbjct: 588 IIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHF 647
Query: 368 PGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRAL 427
+T+T++I G K + + Q+LD M G N+V ++ K G +
Sbjct: 648 LRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSF 707
Query: 428 KFFEGM---EVR-DSFTYTILVHNLCRA 451
F M +++ D Y L+ L RA
Sbjct: 708 TLFGLMGENDIKHDHIAYITLLSGLWRA 735
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 189/453 (41%), Gaps = 12/453 (2%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
K +L+ L + ++C + A + V LG P ++N++I + +
Sbjct: 471 KDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIED 530
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
++ ++E PDV +Y +++ +K + D M E +RP V Y+ ++
Sbjct: 531 LASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIG 590
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
+ G EA F +L S P Y +MIN +NG + A + + +
Sbjct: 591 SLGKQGRVVEAEETFAKMLESG-IQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLR 649
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P TY LI+G K + + L + E G PN + +T ++ + G + +
Sbjct: 650 PSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTL 709
Query: 290 LTEMRSKGYTFDGFAYCTVVAALV-----KTGRVVEADEIAEQMMSNGVEPD-LASYNTM 343
M D AY T+++ L K R V + E+++ + L S +
Sbjct: 710 FGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSS 769
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
+ Y G A+E++ +++K N Y H II G C A RL+EA HL+ M G
Sbjct: 770 LGNY---GSKSFAMEVIGKVKKSIIPN-LYLHNTIITGYCAAGRLDEAYNHLESMQKEGI 825
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR-DSFTYTILVHNLCRARRFLCASKHLV 462
NLV ++ +AG I+ A+ FEG D Y+ L+ LC +R L A ++
Sbjct: 826 VPNLVTYTILMKSHIEAGDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALML 885
Query: 463 ACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
+ G K + ++ L L EA KV
Sbjct: 886 EMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKV 918
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 173/379 (45%), Gaps = 15/379 (3%)
Query: 20 PAILNHENPITSFLTQ-RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECV 78
P + + + I S Q R+ ++ +++ G I I + + ++D+A +
Sbjct: 580 PTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANEL 639
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
+ + VK + P T+ LI + + + GC+ L++M E GL+P+V+ Y +L+ ++
Sbjct: 640 VEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLK 699
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVF----KDVLLS--AE 192
KG F + +F M E++I+ D +Y L+ +R + +V K+ LL
Sbjct: 700 KGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIR 759
Query: 193 TDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEAR 252
T P + + + L G A+ + + ++ +P + +N +I G C A R +EA
Sbjct: 760 TKPLVS----IPSSLGNYGSKSFAMEVIGKV-KKSIIPNLYLHNTIITGYCAAGRLDEAY 814
Query: 253 RLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAAL 312
L ++ G PN +T+T +M G +E +++ + D Y T++ L
Sbjct: 815 NHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCEP---DQVMYSTLLKGL 871
Query: 313 VKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ 372
R ++A + +M +G+ P+ SY ++ EA+++V +
Sbjct: 872 CDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRS 931
Query: 373 YTHTIIIHGLCKAKRLNEA 391
HT +I+ LC+ K+L EA
Sbjct: 932 INHTWLIYILCEEKKLREA 950
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 176/424 (41%), Gaps = 28/424 (6%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G D V + L+ YC+ + + RM E D +N+L+ G ++ G+
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
MF +MI+ ++ +V++Y+I++ Y + G D A R+F + S + + Y +I
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
G K G + A+ + + G VP+ +TY L+ L K A +L + G
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGI 446
Query: 266 NAITFTTVMNCCFRCGRLEQGLE-ILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
N + G +E +E +L E+ K V AL + A
Sbjct: 447 NPPVIDDL-------GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSR 499
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
E+M++ G P SYN++I F++ +++ LV+ I++ D T+ I+++ LCK
Sbjct: 500 IEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCK 559
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFT 440
+ A +D M LG + + ++ LGK G + A + F M D
Sbjct: 560 KNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIA 619
Query: 441 YTILVHNLCR--------------ARRFLCASKHLVACLQCGFQVLKATRRA--VIDGLI 484
Y I+++ R + FL S L GF + + +D ++
Sbjct: 620 YMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKML 679
Query: 485 SDGL 488
DGL
Sbjct: 680 EDGL 683
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 184/450 (40%), Gaps = 71/450 (15%)
Query: 68 KAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE--AGLTPD 125
K +DKA +L+ + G++PD +T+ L+ + +L+ + + G+ P
Sbjct: 390 KKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPP 449
Query: 126 VIS--------YNSLMSGAVRK-------GLFPMT------------LHMFDKMIESEIR 158
VI SL+ RK GL +T L +KM+
Sbjct: 450 VIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCT 509
Query: 159 PDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALS 218
P +SYN ++ C F+ + ++ + +++ + P TY +++N LCK A +
Sbjct: 510 PLPFSYNSVIKCLFQENIIEDLASLV-NIIQELDFVPDVDTYLIVVNELCKKNDRDAAFA 568
Query: 219 MFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCF 278
+ ++ G P V Y+++I L K R EA ++ E+G +P+ I + ++N
Sbjct: 569 IIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYA 628
Query: 279 RCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLA 338
R GR+++ E++ E+ F Y +++ VK G + + + ++M+ +G+ P++
Sbjct: 629 RNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVV 688
Query: 339 SYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA------------- 385
Y +I + ++G + L + + +D + ++ GL +A
Sbjct: 689 LYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEP 748
Query: 386 ------------KRLNEAVQHLDHMNSLGFGF------------NLVASNCVLDGLGKAG 421
K L L + S F NL N ++ G AG
Sbjct: 749 GKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAG 808
Query: 422 HIDRALKFFEGME----VRDSFTYTILVHN 447
+D A E M+ V + TYTIL+ +
Sbjct: 809 RLDEAYNHLESMQKEGIVPNLVTYTILMKS 838
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/409 (20%), Positives = 167/409 (40%), Gaps = 13/409 (3%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G++PD ++++ + FD L+R+ +G P S + ++ + F
Sbjct: 126 GIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEA 185
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
H F+++ E +W L G +EA + + Y +
Sbjct: 186 FHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFY 245
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
CK G A ++F +++ G+ + + Y L+ CK A RL E E
Sbjct: 246 CFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFEL 305
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI- 324
+ F T+++ + G L++G + ++M KG + F Y ++ + K G V A +
Sbjct: 306 DPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF 365
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
S + ++ Y +I+ ++++G +D+A++L+ ++ G D T+ +++ L K
Sbjct: 366 VNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPK 425
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD-----SF 439
L A+ L + G G N V+D L G+I+ ++ G R +
Sbjct: 426 CHELKYAMVILQSILDNGCGIN----PPVIDDL---GNIEVKVESLLGEIARKDANLAAV 478
Query: 440 TYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGL 488
++ LC R ++ A + + G L + +VI L + +
Sbjct: 479 GLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENI 527
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/497 (19%), Positives = 192/497 (38%), Gaps = 52/497 (10%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
R++ G + L+ + + K ++ D+A L + G P + + ++D C
Sbjct: 121 RVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQD 180
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRP-DVWSY 164
F E++KE G + L G G + M D + P V Y
Sbjct: 181 RFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLY 240
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLSAETDP---STATYNVMINGLCKNGYVHNALSMFR 221
L +C+ + G EA +F + E D Y ++ CK+ + A+ ++
Sbjct: 241 KSLFYCFCKRGCAAEAEALFDHM----EVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYL 296
Query: 222 NLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCG 281
+ R F + +N LI+G K ++ R + S+ + G + N T+ ++ + G
Sbjct: 297 RMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEG 356
Query: 282 RLEQGLEI-LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASY 340
++ L + + S+ + + Y ++ K G + +A ++ +M+ NG+ PD +Y
Sbjct: 357 NVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416
Query: 341 NTMIYLYFRQGRVDEALELVDQIEKEG-----PGNDQYTH-------------------- 375
++ + + + A+ ++ I G P D +
Sbjct: 417 FVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLA 476
Query: 376 ----TIIIHGLCKAKRLNEAVQHLDHMNSLG-----FGFNLVA----SNCVLDGLGKAGH 422
++ LC + A+ ++ M +LG F +N V +++ L +
Sbjct: 477 AVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVN 536
Query: 423 IDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDG 482
I + L F V D TY I+V+ LC+ A + A + G + A ++I
Sbjct: 537 IIQELDF-----VPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGS 591
Query: 483 LISDGLKNEAKKVRLKI 499
L G EA++ K+
Sbjct: 592 LGKQGRVVEAEETFAKM 608
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
+I VK ++P++ NT+I YC D LE M++ G+ P++++Y LM +
Sbjct: 782 VIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIE 841
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
G + +F+ + PD Y+ L+ P +A + ++ S +P+
Sbjct: 842 AGDIESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSG-INPNKD 897
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
+Y ++ LC + A+ + +++ P + + LI LC+ ++ EAR L +
Sbjct: 898 SYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIM 957
Query: 259 REAG 262
++G
Sbjct: 958 VQSG 961
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQ-MMSNGVEPDLASYNTMIYLYFRQGRVDE 355
G D Y ++ L + G+ A+ Q ++ NG+ PD + ++M++ + R DE
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 356 ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD 415
A +D+I G + + ++++ LC R EA + + G G L +
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFK 209
Query: 416 GLGKAGHIDRALKFFEGM 433
GL GH++ A+ + +
Sbjct: 210 GLCGHGHLNEAIGMLDTL 227
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 131/249 (52%), Gaps = 1/249 (0%)
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
M ++ + DV+ +++ + G ++F +M E I P+V +YN ++ + G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYN 236
+A+++ + ++ + +P T++ +IN K V A +++ + R P +TYN
Sbjct: 61 WSDADQLLRH-MIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYN 119
Query: 237 ALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
++I+G CK R ++A+R+L G P+ +TF+T++N + R++ G+EI EM +
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA 356
G + Y T++ + G + A ++ +M+S GV PD +++ M+ + + +A
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Query: 357 LELVDQIEK 365
+++ ++K
Sbjct: 240 FAILEDLQK 248
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 123/242 (50%), Gaps = 1/242 (0%)
Query: 87 VLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTL 146
+ DVV ++D C+ + + M E G+ P+V++YN ++ G +
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 147 HMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMING 206
+ MIE +I PD+ +++ L++ + + EA ++K+ +L P+T TYN MI+G
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKE-MLRWSIFPTTITYNSMIDG 124
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
CK V +A M ++ +G P+V+T++ LING CKA+R + + E G N
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
+T+TT+++ + G L+ ++L EM S G D + ++A L + +A I E
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
Query: 327 QM 328
+
Sbjct: 245 DL 246
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 119/232 (51%)
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+++ LCK+G NA ++F + +G P VLTYN +I+ C + R ++A +LL E
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
P+ +TF+ ++N + ++ + EI EM Y +++ K RV +A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+ + M S G PD+ +++T+I Y + RVD +E+ ++ + G + T+T +IHG
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
C+ L+ A L+ M S G + + +C+L GL + +A E ++
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 118/232 (50%), Gaps = 1/232 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ +CK A+ + + + G+ P+V+T+N +ID++C + ++L M E +
Sbjct: 17 VDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQI 76
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
PD++++++L++ V++ ++ +M+ I P +YN ++ + + D+A R
Sbjct: 77 NPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKR 136
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+ D + S P T++ +ING CK V N + +F + RRG V +TY LI+G
Sbjct: 137 ML-DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
C+ + A+ LL+E G P+ ITF ++ L + IL +++
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 231 EVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEIL 290
+V+ A+++ LCK A+ L +E E G PN +T+ +++ GR ++L
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLL 68
Query: 291 TEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQ 350
M K D + ++ A VK +V EA+EI ++M+ + P +YN+MI + +Q
Sbjct: 69 RHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQ 128
Query: 351 GRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVAS 410
RVD+A ++D + +G D T + +I+G CKAKR++ ++ M+ G N V
Sbjct: 129 DRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
Query: 411 NCVLDGLGKAGHIDRALKFFEGM----EVRDSFTYTILVHNLCRARRF 454
++ G + G +D A M D T+ ++ LC +
Sbjct: 189 TTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 236
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 104/205 (50%)
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
P+ TYN MI+ C +G +A + R++ + P+++T++ALIN K R+ +EA +
Sbjct: 43 PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI 102
Query: 255 LSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK 314
E P IT+ ++++ + R++ +L M SKG + D + T++ K
Sbjct: 103 YKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 162
Query: 315 TGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYT 374
RV EI +M G+ + +Y T+I+ + + G +D A +L++++ G D T
Sbjct: 163 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 222
Query: 375 HTIIIHGLCKAKRLNEAVQHLDHMN 399
++ GLC K L +A L+ +
Sbjct: 223 FHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 7/210 (3%)
Query: 289 ILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYF 348
+ TEM KG + Y ++ + +GR +AD++ M+ + PD+ +++ +I +
Sbjct: 32 LFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFV 91
Query: 349 RQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLV 408
++ +V EA E+ ++ + T+ +I G CK R+++A + LD M S G ++V
Sbjct: 92 KERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 151
Query: 409 ASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVAC 464
+ +++G KA +D ++ F M R ++ TYT L+H C+ A L
Sbjct: 152 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211
Query: 465 LQCGFQVLKATRRAVIDGLISDGLKNEAKK 494
+ CG T ++ GL S K E +K
Sbjct: 212 ISCGVAPDYITFHCMLAGLCS---KKELRK 238
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 108/224 (48%), Gaps = 9/224 (4%)
Query: 10 HFNAAYPFTH-------PAILNHENPITSFL-TQRITHSKNVTFRIMVKGRSLSTKFLNI 61
H NA FT P +L + I SF + R + + + ++ K + +
Sbjct: 26 HINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSA 85
Query: 62 CIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAG 121
I + K +++ +AE + + ++ + P +T+N++ID +C+ D +L+ M G
Sbjct: 86 LINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG 145
Query: 122 LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
+PDV+++++L++G + + +F +M I + +Y L+H + ++G D A
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 205
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
+ + ++S P T++ M+ GLC + A ++ +LQ+
Sbjct: 206 DLLNE-MISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 20 PAILNHENPITSFLTQ-RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECV 78
P + + + I F Q R+ +K + + KG S + I CKAK++D +
Sbjct: 113 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 172
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
+ + G++ + VT+ TLI +C+ DA ++L M G+ PD I+++ +++G
Sbjct: 173 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 232
Query: 139 KGLFPMTLHMFDKMIESE 156
K + + + +SE
Sbjct: 233 KKELRKAFAILEDLQKSE 250
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 172/377 (45%), Gaps = 18/377 (4%)
Query: 85 LGVLPDV-VTFNTLIDAYC------RFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
LG LP +++ LI+ ++ S CE + ++++ PDVI +N L+
Sbjct: 131 LGALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWI--LRKSSFQPDVICFNLLIDAYG 188
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
+K + ++ +++ES P +Y +L+ Y G+ + A V + + + P T
Sbjct: 189 QKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVE-MQNHHVSPKT 247
Query: 198 ---ATYNVMINGLCK-NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARR 253
YN I GL K G A+ +F+ ++R P TYN +IN KA ++ + +
Sbjct: 248 IGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWK 307
Query: 254 LLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
L E R +PN T+T ++N R G E+ EI +++ G D + Y ++ +
Sbjct: 308 LYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS 367
Query: 314 KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQY 373
+ G A EI M G EPD ASYN M+ Y R G +A + +++++ G
Sbjct: 368 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 427
Query: 374 THTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
+H +++ KA+ + + + M+ G + N +L+ G+ G + K M
Sbjct: 428 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 487
Query: 434 E----VRDSFTYTILVH 446
E D TY IL++
Sbjct: 488 ENGPCTADISTYNILIN 504
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 151/315 (47%), Gaps = 9/315 (2%)
Query: 89 PDVVTFNTLIDAYCR----FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
P T+N +I+ Y + ++S+ CE M+ P++ +Y +L++ R+GL
Sbjct: 284 PTTETYNLMINLYGKASKSYMSWKLYCE----MRSHQCKPNICTYTALVNAFAREGLCEK 339
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
+F+++ E + PDV+ YN LM Y R G P A +F ++ +P A+YN+M+
Sbjct: 340 AEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF-SLMQHMGCEPDRASYNIMV 398
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
+ + G +A ++F ++R G P + ++ L++ KAR + ++ E E G E
Sbjct: 399 DAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVE 458
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
P+ +++N R G+ + +IL EM + T D Y ++ K G + +E+
Sbjct: 459 PDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEEL 518
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
++ PD+ ++ + I Y R+ + LE+ +++ G D T +++
Sbjct: 519 FVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSS 578
Query: 385 AKRLNEAVQHLDHMN 399
+++ + L M+
Sbjct: 579 EEQVEQVTSVLRTMH 593
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 169/379 (44%), Gaps = 5/379 (1%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N+ I + + Q +AE + + ++ +P T+ LI AYC + VL M+
Sbjct: 180 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 239
Query: 119 EAGLTPDVIS---YNSLMSGAV-RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRL 174
++P I YN+ + G + RKG + +F +M +P +YN++++ Y +
Sbjct: 240 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 299
Query: 175 GMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLT 234
+ +++ + + S + P+ TY ++N + G A +F LQ G P+V
Sbjct: 300 SKSYMSWKLYCE-MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 358
Query: 235 YNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
YNAL+ +A A + S + G EP+ ++ +++ R G + EM+
Sbjct: 359 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 418
Query: 295 SKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
G ++ +++A K V + + I ++M NGVEPD N+M+ LY R G+
Sbjct: 419 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 478
Query: 355 EALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL 414
+ +++ ++E D T+ I+I+ KA L + + F ++V +
Sbjct: 479 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 538
Query: 415 DGLGKAGHIDRALKFFEGM 433
+ + L+ FE M
Sbjct: 539 GAYSRKKLYVKCLEVFEEM 557
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 142/282 (50%), Gaps = 4/282 (1%)
Query: 122 LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
LTP YN+L+S R GL ++ +M+E + PD++++N L++ Y +LG EA
Sbjct: 118 LTPKC--YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAK 175
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
+ + L+ A DP TY I G C+ V A +F+ + + G ++Y LI G
Sbjct: 176 Q-YVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYG 234
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
L +A++ +EA LL + ++ PN T+T +++ G+ + + + +M G D
Sbjct: 235 LFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPD 294
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
Y ++ + + EA + E M+ NG+ P++ +YN +I + ++ V +A+ L+
Sbjct: 295 DCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLS 353
Query: 362 QIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
++ ++ D T+ +I G C + L+ A + L M G
Sbjct: 354 KMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 134/271 (49%), Gaps = 2/271 (0%)
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
YN L+ R G+ +E R++ + +L P T+N ++NG CK GYV A L
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTE-MLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
+ G P+ TY + I G C+ + + A ++ E + G N +++T ++ F ++
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
++ L +L +M+ + Y ++ AL +G+ EA + +QM +G++PD Y +
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
I + +DEA L++ + + G + T+ +I G CK K +++A+ L M
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNL 360
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
+L+ N ++ G +G++D A + ME
Sbjct: 361 VPDLITYNTLIAGQCSSGNLDSAYRLLSLME 391
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 139/300 (46%), Gaps = 14/300 (4%)
Query: 46 RIMVKGRSLSTKF------LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLID 99
R M KG S K+ N ++S+ + +++ + + + ++ V PD+ TFNTL++
Sbjct: 104 RTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVN 163
Query: 100 AYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRP 159
YC+ + + + +AG PD +Y S ++G R+ +F +M ++
Sbjct: 164 GYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHR 223
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD---PSTATYNVMINGLCKNGYVHNA 216
+ SY L++ F DEA +L+ + D P+ TY V+I+ LC +G A
Sbjct: 224 NEVSYTQLIYGLFEAKKIDEA----LSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEA 279
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC 276
+++F+ + G P+ Y LI C +EA LL E G PN IT+ ++
Sbjct: 280 MNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIK- 338
Query: 277 CFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPD 336
F + + + +L++M + D Y T++A +G + A + M +G+ P+
Sbjct: 339 GFCKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 2/207 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I C+ K++D A V + + G + V++ LI D +L +MK+
Sbjct: 197 ITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNC 256
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P+V +Y L+ G +++F +M ES I+PD Y +L+ + DEA+
Sbjct: 257 CPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASG 316
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+ + +L + P+ TYN +I G CK VH A+ + + + VP+++TYN LI G
Sbjct: 317 LLEHMLENGLM-PNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQ 374
Query: 243 CKARRANEARRLLSEFREAGHEPNAIT 269
C + + A RLLS E+G PN T
Sbjct: 375 CSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 130/281 (46%), Gaps = 2/281 (0%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
+N L+ + RF + + M E ++PD+ ++N+L++G + G +I
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
++ PD ++Y + + R D A +VFK++ + + +Y +I GL + +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNG-CHRNEVSYTQLIYGLFEAKKI 241
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
ALS+ ++ P V TY LI+ LC + + +EA L + E+G +P+ +T +
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
+ L++ +L M G + Y ++ K V +A + +M+ +
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNL 360
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYT 374
PDL +YNT+I G +D A L+ +E+ G +Q T
Sbjct: 361 VPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 183/411 (44%), Gaps = 12/411 (2%)
Query: 35 QRITHSKNVTFRIMV-----KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLP 89
+R H++ FR +G + +++ N ++ + K +Q + VL + G+L
Sbjct: 169 ERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT 228
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
+ TF + A+ + E MK+ V + N L+ R L +F
Sbjct: 229 -METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 287
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
DK+ E P++ +Y +L++ + R+ EA R++ D ++ P +NVM+ GL +
Sbjct: 288 DKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWND-MIDHGLKPDIVAHNVMLEGLLR 345
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
+ +A+ +F ++ +G P V +Y +I CK A + ++G +P+A
Sbjct: 346 SMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
+T ++ +L+ E+L EM+ KG+ DG Y ++ + I +M+
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 465
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
N +EP + ++N ++ YF + + D++ K+G D ++T++I GL +
Sbjct: 466 QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 525
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFT 440
EA ++L+ M G L+ N + G + FE + R F+
Sbjct: 526 EACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE----IFEELAQRAKFS 572
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 3/324 (0%)
Query: 45 FRIMVKGR-SLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
F +M K + + + +N + S+ +AK L K VL D +K P+++T+ L++ +CR
Sbjct: 252 FELMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCR 310
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
+ + M + GL PD++++N ++ G +R + +F M P+V S
Sbjct: 311 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
Y I++ + + + A F D++ S P A Y +I G + + + +
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSG-LQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
Q +G P+ TYNALI + + R+ ++ + EP+ TF +M F
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 489
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
E G + EM KG D +Y ++ L+ G+ EA E+M+ G++ L YN
Sbjct: 490 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Query: 344 IYLYFRQGRVDEALELVDQIEKEG 367
+ R G+ + EL + + G
Sbjct: 550 AADFHRGGQPEIFEELAQRAKFSG 573
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 40/251 (15%)
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
T+ + + A+ +F +++ F V T N L++ L +A+ EA+ L +
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
+E PN +T+T ++N +C V +
Sbjct: 291 KER-FTPNMMTYTVLLN----------------------------GWCRV-------RNL 314
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
+EA I M+ +G++PD+ ++N M+ R + +A++L ++ +GP + ++TI+
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR-- 436
I CK + A+++ D M G + C++ G G +D + + M+ +
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 437 --DSFTYTILV 445
D TY L+
Sbjct: 435 PPDGKTYNALI 445
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGY-TFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
T+ ++M+ + + E + +L EM +KG T + F A K + +A I E
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERK--KAVGIFEL 254
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M + + + N ++ R EA L D++ KE + T+T++++G C+ +
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRN 313
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTI 443
L EA + + M G ++VA N +L+GL ++ A+K F M+ + + +YTI
Sbjct: 314 LIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTI 373
Query: 444 LVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGL 483
++ + C+ A ++ + G Q A +I G
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 77/160 (48%), Gaps = 4/160 (2%)
Query: 339 SYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM 398
+YN+M+ + + + + + +++++ +G + T TI + AK +AV + M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELM 255
Query: 399 NSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR---DSFTYTILVHNLCRARRFL 455
F + NC+LD LG+A A F+ ++ R + TYT+L++ CR R +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 456 CASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
A++ + G + +++GL+ K++A K+
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 355
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 183/411 (44%), Gaps = 12/411 (2%)
Query: 35 QRITHSKNVTFRIMV-----KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLP 89
+R H++ FR +G + ++ N ++ + K +Q + VL + G+L
Sbjct: 169 ERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT 228
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
+ TF + A+ + E MK+ V + N L+ R L +F
Sbjct: 229 -METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 287
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
DK+ E P++ +Y +L++ + R+ EA R++ D ++ P +NVM+ GL +
Sbjct: 288 DKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWND-MIDQGLKPDIVAHNVMLEGLLR 345
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
+ +A+ +F ++ +G P V +Y +I CK A + ++G +P+A
Sbjct: 346 SRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
+T ++ +L+ E+L EM+ KG+ DG Y ++ + A I +M+
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMI 465
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
N +EP + ++N ++ YF + + +++ K+G D ++T++I GL +
Sbjct: 466 QNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSR 525
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFT 440
EA ++L+ M G L+ N + G + FE + R F+
Sbjct: 526 EACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE----IFEELAQRAKFS 572
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 148/324 (45%), Gaps = 3/324 (0%)
Query: 45 FRIMVKGR-SLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
F +M K + + + +N + S+ +AK L K VL D +K P+++T+ L++ +CR
Sbjct: 252 FELMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCR 310
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
+ + M + GL PD++++N ++ G +R + +F M P+V S
Sbjct: 311 VRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
Y I++ + + + A F D++ S P A Y +I G + + + +
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSG-LQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
Q +G P+ TYNALI + + A R+ ++ + EP+ TF +M F
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNY 489
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
E G + EM KG D +Y ++ L+ G+ EA E+M+ G++ L YN
Sbjct: 490 EMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Query: 344 IYLYFRQGRVDEALELVDQIEKEG 367
+ R G+ + EL + + G
Sbjct: 550 AADFHRGGQPEIFEELAQRAKFSG 573
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 40/251 (15%)
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
T+ + + A+ +F +++ F V T N L++ L +A+ EA+ L +
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
+E PN +T+T ++N +C V +
Sbjct: 291 KER-FTPNMMTYTVLLN----------------------------GWCRV-------RNL 314
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
+EA I M+ G++PD+ ++N M+ R + +A++L ++ +GP + ++TI+
Sbjct: 315 IEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR-- 436
I CK + A+++ D M G + C++ G G +D + + M+ +
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 437 --DSFTYTILV 445
D TY L+
Sbjct: 435 PPDGKTYNALI 445
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 8/227 (3%)
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY-TFDGFAYCTVVAALVKTGRVVE 320
G ++ T+ ++M+ + + E + +L EM +KG T + F A K + +
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERK--K 247
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIH 380
A I E M + + + N ++ R EA L D++ KE + T+T++++
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLN 306
Query: 381 GLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR---- 436
G C+ + L EA + + M G ++VA N +L+GL ++ A+K F M+ +
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
Query: 437 DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGL 483
+ +YTI++ + C+ A ++ + G Q A +I G
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 4/168 (2%)
Query: 331 NGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
G D +YN+M+ + + + + + +++++ +G + T TI + AK +
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKK 247
Query: 391 AVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR---DSFTYTILVHN 447
AV + M F + NC+LD LG+A A F+ ++ R + TYT+L++
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 448 LCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
CR R + A++ + G + +++GL+ K++A K+
Sbjct: 308 WCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 155/325 (47%), Gaps = 16/325 (4%)
Query: 65 SMCKAKQ-LDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLT 123
S+C K + KA+ +L KLGV P+ + LI A+CR + E E + +
Sbjct: 573 SLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIV 632
Query: 124 PDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRV 183
PD+ +Y +++ R +F+ M +++PDV +Y++L++ L M E
Sbjct: 633 PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAF 692
Query: 184 FKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLC 243
DV+ P Y +MIN C + ++F++++RR VP+V+TY L+
Sbjct: 693 --DVI------PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL---- 740
Query: 244 KARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGF 303
+ R L E + +P+ +T +++ + G L + I +M G D
Sbjct: 741 ---KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAA 797
Query: 304 AYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQI 363
Y ++A K G + EA I ++M+ +GV+PD+ Y +I R G V +A++LV ++
Sbjct: 798 PYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEM 857
Query: 364 EKEGPGNDQYTHTIIIHGLCKAKRL 388
++G + + + + + KAK L
Sbjct: 858 LEKGIKPTKASLSAVHYAKLKAKGL 882
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 164/396 (41%), Gaps = 39/396 (9%)
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEA-GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
L+ AY FD ++ R + G PD+ + N L+S + G M + F ++
Sbjct: 150 TALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIE 209
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST---------------- 197
+ D +Y +++ +R +E ++ +L+S +P
Sbjct: 210 RLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTD 269
Query: 198 ----------------------ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTY 235
Y ++ GLC + +A S+ ++++ G P+V Y
Sbjct: 270 IAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVY 329
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
+A+I G K +A + ++ + N + ++++ C + G + ++ E R
Sbjct: 330 SAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRE 389
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDE 355
+ D Y AL K G+V EA E+ +M G+ PD+ +Y T+I QG+ +
Sbjct: 390 TNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSD 449
Query: 356 ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD 415
A +L+ +++ G D + ++ GL EA + L M + G V N V++
Sbjct: 450 AFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIE 509
Query: 416 GLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRA 451
GL AG +D+A F+E +E + +V C A
Sbjct: 510 GLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAA 545
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 173/380 (45%), Gaps = 22/380 (5%)
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
+L+D LG+ + ++ C + + V+ M++ G+ PDV Y++++ G
Sbjct: 283 ILVDKSDLGI-----AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHR 337
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
+ P + +F+KM++ R + + ++ CY ++G EA +FK+ ET+ S
Sbjct: 338 KNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEF---RETNISL 394
Query: 198 --ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
YNV + L K G V A+ +FR + +G P+V+ Y LI G C + ++A L+
Sbjct: 395 DRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLM 454
Query: 256 SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT 315
E G P+ + + + G ++ E L M ++G + V+ L+
Sbjct: 455 IEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDA 514
Query: 316 GRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTH 375
G + +A+ E + E D +M+ + G +D A E ++E P + +T
Sbjct: 515 GELDKAEAFYESLEHKSREND----ASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFT- 569
Query: 376 TIIIHGLCKAKR-LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
+ LC K +++A LD M LG ++ + ++ +A +FFE +
Sbjct: 570 --LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILV 627
Query: 435 ----VRDSFTYTILVHNLCR 450
V D FTYTI+++ CR
Sbjct: 628 TKKIVPDLFTYTIMINTYCR 647
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 148/316 (46%), Gaps = 17/316 (5%)
Query: 88 LPDVVTFNTLIDAYCRFVSFDAGCE-VLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTL 146
LP V F TL + C + + + +L+RM + G+ P+ Y L+ R
Sbjct: 562 LPKSVYF-TLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAR 620
Query: 147 HMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMING 206
F+ ++ +I PD+++Y I+++ Y RL P +A +F+D + + P TY+V++N
Sbjct: 621 EFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFED-MKRRDVKPDVVTYSVLLNS 679
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
L M R ++ +P+V+ Y +IN C + L + + P+
Sbjct: 680 -------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPD 732
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
+T+T ++ + E+ L EM++ D F Y ++ K G + EA I +
Sbjct: 733 VVTYTVLLK-----NKPERNLS--REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFD 785
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
QM+ +GV+PD A Y +I + G + EA + D++ + G D +T +I G C+
Sbjct: 786 QMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNG 845
Query: 387 RLNEAVQHLDHMNSLG 402
+ +AV+ + M G
Sbjct: 846 FVLKAVKLVKEMLEKG 861
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 166/390 (42%), Gaps = 27/390 (6%)
Query: 48 MVKGRSLSTKFL--NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
M++ R + ++ N+ I + A +LDKAE D +++ +C
Sbjct: 491 MMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDA----SMVKGFCAAG 546
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
D E R++ P + + S K + D+M + + P+ Y
Sbjct: 547 CLDHAFERFIRLEFP--LPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYG 604
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
L+ + R+ +A R F ++L++ + P TY +MIN C+ A ++F +++R
Sbjct: 605 KLIGAWCRVNNVRKA-REFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKR 663
Query: 226 RGFVPEVLTYNALING--LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
R P+V+TY+ L+N +R EA ++ P+ + +T ++N L
Sbjct: 664 RDVKPDVVTYSVLLNSDPELDMKREMEAFDVI---------PDVVYYTIMINRYCHLNDL 714
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
++ + +M+ + D Y ++ K R ++ +M + V+PD+ Y +
Sbjct: 715 KKVYALFKDMKRREIVPDVVTYTVLLKN--KPER-----NLSREMKAFDVKPDVFYYTVL 767
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
I + G + EA + DQ+ + G D +T +I CK L EA D M G
Sbjct: 768 IDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGV 827
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
++V ++ G + G + +A+K + M
Sbjct: 828 KPDVVPYTALIAGCCRNGFVLKAVKLVKEM 857
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 58 FLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM 117
+ + I CK L +A+ + ++ GV PD + LI C+ + +RM
Sbjct: 763 YYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRM 822
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRP 159
E+G+ PDV+ Y +L++G R G + + +M+E I+P
Sbjct: 823 IESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 172/377 (45%), Gaps = 18/377 (4%)
Query: 85 LGVLPDV-VTFNTLIDAYC------RFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
LG LP +++ LI+ ++ S CE + ++++ PDVI +N L+
Sbjct: 109 LGALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWI--LRKSSFQPDVICFNLLIDAYG 166
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
+K + ++ +++ES P +Y +L+ Y G+ + A V + + + P T
Sbjct: 167 QKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVE-MQNHHVSPKT 225
Query: 198 ---ATYNVMINGLCK-NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARR 253
YN I GL K G A+ +F+ ++R P TYN +IN KA ++ + +
Sbjct: 226 IGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWK 285
Query: 254 LLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
L E R +PN T+T ++N R G E+ EI +++ G D + Y ++ +
Sbjct: 286 LYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS 345
Query: 314 KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQY 373
+ G A EI M G EPD ASYN M+ Y R G +A + +++++ G
Sbjct: 346 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 405
Query: 374 THTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
+H +++ KA+ + + + M+ G + N +L+ G+ G + K M
Sbjct: 406 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 465
Query: 434 E----VRDSFTYTILVH 446
E D TY IL++
Sbjct: 466 ENGPCTADISTYNILIN 482
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 151/315 (47%), Gaps = 9/315 (2%)
Query: 89 PDVVTFNTLIDAYCR----FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
P T+N +I+ Y + ++S+ CE M+ P++ +Y +L++ R+GL
Sbjct: 262 PTTETYNLMINLYGKASKSYMSWKLYCE----MRSHQCKPNICTYTALVNAFAREGLCEK 317
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
+F+++ E + PDV+ YN LM Y R G P A +F ++ +P A+YN+M+
Sbjct: 318 AEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF-SLMQHMGCEPDRASYNIMV 376
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
+ + G +A ++F ++R G P + ++ L++ KAR + ++ E E G E
Sbjct: 377 DAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVE 436
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
P+ +++N R G+ + +IL EM + T D Y ++ K G + +E+
Sbjct: 437 PDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEEL 496
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
++ PD+ ++ + I Y R+ + LE+ +++ G D T +++
Sbjct: 497 FVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSS 556
Query: 385 AKRLNEAVQHLDHMN 399
+++ + L M+
Sbjct: 557 EEQVEQVTSVLRTMH 571
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 169/379 (44%), Gaps = 5/379 (1%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N+ I + + Q +AE + + ++ +P T+ LI AYC + VL M+
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 217
Query: 119 EAGLTPDVIS---YNSLMSGAV-RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRL 174
++P I YN+ + G + RKG + +F +M +P +YN++++ Y +
Sbjct: 218 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 277
Query: 175 GMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLT 234
+ +++ + + S + P+ TY ++N + G A +F LQ G P+V
Sbjct: 278 SKSYMSWKLYCE-MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 336
Query: 235 YNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
YNAL+ +A A + S + G EP+ ++ +++ R G + EM+
Sbjct: 337 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 396
Query: 295 SKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
G ++ +++A K V + + I ++M NGVEPD N+M+ LY R G+
Sbjct: 397 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 456
Query: 355 EALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL 414
+ +++ ++E D T+ I+I+ KA L + + F ++V +
Sbjct: 457 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 516
Query: 415 DGLGKAGHIDRALKFFEGM 433
+ + L+ FE M
Sbjct: 517 GAYSRKKLYVKCLEVFEEM 535
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 194/441 (43%), Gaps = 52/441 (11%)
Query: 45 FRIMVKGRSLSTKFLNICIASMC-KAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
FR+M+K L FL I C ++ + + +KLG+ + N+++ Y +
Sbjct: 169 FRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAK 228
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
D + RM+E DVI++NS++ + G + + +M + I P + +
Sbjct: 229 CGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT 284
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA---TYNVMINGLCKNGYVHNALSMF 220
+NIL+ Y +LG D A D++ ET TA T+ MI+GL NG + AL MF
Sbjct: 285 WNILIGGYNQLGKCDAA----MDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 221 RNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRC 280
R + G VP +T + ++ + N+ + S + G + + ++++ +C
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 281 GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASY 340
G+LE ++ +++K D + + +++ + G +A E+ +M + P++ ++
Sbjct: 401 GKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW 456
Query: 341 NTMIYLYFRQGRVDEALELVDQIEKEGP-GNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
NTMI Y + G EA++L ++EK+G + T +II G + + +EA++ M
Sbjct: 457 NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Query: 400 SLGFGFNLVA-----------------------------------SNCVLDGLGKAGHID 424
F N V N + D K+G I+
Sbjct: 517 FSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIE 576
Query: 425 RALKFFEGMEVRDSFTYTILV 445
+ F GME +D T+ L+
Sbjct: 577 YSRTIFLGMETKDIITWNSLI 597
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 155/326 (47%), Gaps = 23/326 (7%)
Query: 82 GVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGL 141
VK+G + DV+ N+L+D Y + + +V + +K DV ++NS+++G + G
Sbjct: 378 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGY 433
Query: 142 FPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYN 201
+F +M ++ +RP++ ++N ++ Y + G EA +F+ + + +TAT+N
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL----LSE 257
++I G +NG AL +FR +Q F+P +T +L+ A R + L
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR 553
Query: 258 FREAGHE-PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
+A H NA+T T + G +E I M +K D + +++ V G
Sbjct: 554 NLDAIHAVKNALTDTYA-----KSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHG 604
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG---PGNDQY 373
A + QM + G+ P+ + +++I + G VDE ++ I + P +
Sbjct: 605 SYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHC 664
Query: 374 THTIIIHGLCKAKRLNEAVQHLDHMN 399
+ + ++G +A RL EA+Q + MN
Sbjct: 665 SAMVYLYG--RANRLEEALQFIQEMN 688
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 191/458 (41%), Gaps = 97/458 (21%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N + + C+ + ++A ++ + K G+ P +VT+N LI Y + DA +++++M+
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME 309
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRP------------------- 159
G+T DV ++ +++SG + G+ L MF KM + + P
Sbjct: 310 TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVIN 369
Query: 160 ----------------DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
DV N L+ Y + G ++A +VF V + T+N M
Sbjct: 370 QGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV-----KNKDVYTWNSM 424
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
I G C+ GY A +F +Q P ++T+N +I+G K EA L + G
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGK 484
Query: 264 -EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT------- 315
+ N T+ ++ + G+ ++ LE+ +M+ + + +++ A
Sbjct: 485 VQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVR 544
Query: 316 ---GRVVEADEIAEQMMSN--------------------GVE-PDLASYNTMIYLYFRQG 351
G V+ + A + N G+E D+ ++N++I Y G
Sbjct: 545 EIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHG 604
Query: 352 RVDEALELVDQIEKEG--PGNDQYTHTIIIHGLC----KAKRLNEAVQH-------LDHM 398
AL L +Q++ +G P + I+ HGL + K++ ++ + L+H
Sbjct: 605 SYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHC 664
Query: 399 NSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR 436
+++ + + G+A ++ AL+F + M ++
Sbjct: 665 SAMVYLY------------GRANRLEEALQFIQEMNIQ 690
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 159/361 (44%), Gaps = 14/361 (3%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
++ T++ +I AY R + ++ M + G+ PD + ++ G G +
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
+I+ + + N ++ Y + G D A + F+ + + +N ++ C+
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRM-----RERDVIAWNSVLLAYCQ 259
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
NG A+ + + +++ G P ++T+N LI G + + + A L+ + G + T
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFT 319
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
+T +++ G Q L++ +M G + + V+A + + E+ +
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV 379
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
G D+ N+++ +Y + G++++A ++ D ++ + D YT +I G C+A
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCG 435
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME-----VRDSFTYTIL 444
+A + M N++ N ++ G K G A+ F+ ME R++ T+ ++
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 445 V 445
+
Sbjct: 496 I 496
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 154/378 (40%), Gaps = 44/378 (11%)
Query: 159 PDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALS 218
PDV+ L+ Y + G +A +VF + + + T++ MI +
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSM-----RERNLFTWSAMIGAYSRENRWREVAK 167
Query: 219 MFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCF 278
+FR + + G +P+ + ++ G + + S + G +++
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 279 RCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLA 338
+CG L+ + MR + D A+ +V+ A + G+ EA E+ ++M G+ P L
Sbjct: 228 KCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 339 SYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL---------------- 382
++N +I Y + G+ D A++L+ ++E G D +T T +I GL
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 383 ------------------CKA-KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHI 423
C K +N+ + +GF +++ N ++D K G +
Sbjct: 344 FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 424 DRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGL 483
+ A K F+ ++ +D +T+ ++ C+A A + + T +I G
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY 463
Query: 484 ISDGLKNEAKKVRLKIRK 501
I +G + EA + ++ K
Sbjct: 464 IKNGDEGEAMDLFQRMEK 481
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 182/411 (44%), Gaps = 12/411 (2%)
Query: 35 QRITHSKNVTFRIMV-----KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLP 89
+R H++ FR +G + ++ N ++ + K +Q + VL + G+L
Sbjct: 168 ERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT 227
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
+ TF + A+ + E MK+ V + N L+ R L +F
Sbjct: 228 -METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 286
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
DK+ E P++ +Y +L++ + R+ EA R++ D ++ P +NVM+ GL +
Sbjct: 287 DKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWND-MIDHGLKPDIVAHNVMLEGLLR 344
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
+ +A+ +F ++ +G P V +Y +I CK A + ++G +P+A
Sbjct: 345 SMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 404
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
+T ++ +L+ E+L EM+ KG+ DG Y ++ + I +M+
Sbjct: 405 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 464
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
N +EP + ++N ++ YF + + D++ K+G D ++T++I GL +
Sbjct: 465 QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 524
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFT 440
EA ++L+ M G L+ N + G + FE + R F+
Sbjct: 525 EACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE----IFEELAQRAKFS 571
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 3/324 (0%)
Query: 45 FRIMVKGR-SLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
F +M K + + + +N + S+ +AK L K VL D +K P+++T+ L++ +CR
Sbjct: 251 FELMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCR 309
Query: 104 FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
+ + M + GL PD++++N ++ G +R + +F M P+V S
Sbjct: 310 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 369
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
Y I++ + + + A F D++ S P A Y +I G + + + +
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSG-LQPDAAVYTCLITGFGTQKKLDTVYELLKEM 428
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
Q +G P+ TYNALI + + R+ ++ + EP+ TF +M F
Sbjct: 429 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 488
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
E G + EM KG D +Y ++ L+ G+ EA E+M+ G++ L YN
Sbjct: 489 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 548
Query: 344 IYLYFRQGRVDEALELVDQIEKEG 367
+ R G+ + EL + + G
Sbjct: 549 AADFHRGGQPEIFEELAQRAKFSG 572
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 40/251 (15%)
Query: 199 TYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF 258
T+ + + A+ +F +++ F V T N L++ L +A+ EA+ L +
Sbjct: 230 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 289
Query: 259 REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
+E PN +T+T ++N +C V +
Sbjct: 290 KER-FTPNMMTYTVLLN----------------------------GWCRV-------RNL 313
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
+EA I M+ +G++PD+ ++N M+ R + +A++L ++ +GP + ++TI+
Sbjct: 314 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 373
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR-- 436
I CK + A+++ D M G + C++ G G +D + + M+ +
Sbjct: 374 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 433
Query: 437 --DSFTYTILV 445
D TY L+
Sbjct: 434 PPDGKTYNALI 444
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 8/227 (3%)
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY-TFDGFAYCTVVAALVKTGRVVE 320
G ++ T+ ++M+ + + E + +L EM +KG T + F A K + +
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERK--K 246
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIH 380
A I E M + + + N ++ R EA L D++ KE + T+T++++
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLN 305
Query: 381 GLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR---- 436
G C+ + L EA + + M G ++VA N +L+GL ++ A+K F M+ +
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 365
Query: 437 DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGL 483
+ +YTI++ + C+ A ++ + G Q A +I G
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 412
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 4/168 (2%)
Query: 331 NGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
G D +YN+M+ + + + + + +++++ +G + T TI + AK +
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKK 246
Query: 391 AVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR---DSFTYTILVHN 447
AV + M F + NC+LD LG+A A F+ ++ R + TYT+L++
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 306
Query: 448 LCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
CR R + A++ + G + +++GL+ K++A K+
Sbjct: 307 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 354
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 157/331 (47%), Gaps = 2/331 (0%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR-KGLFPMTLHM 148
+V N+++ + D+ ++ ++MK GL PDV++YN+L++G ++ K +P + +
Sbjct: 165 NVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIEL 224
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
++ + I+ D Y ++ G +EA + + + + P+ Y+ ++N
Sbjct: 225 IGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHS-PNIYHYSSLLNSYS 283
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
G A + ++ G VP + L+ K + +R LLSE AG+ N +
Sbjct: 284 WKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEM 343
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
+ +M+ + G+LE+ I +M+ KG DG+A +++AL ++ R EA E++
Sbjct: 344 PYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDS 403
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
+ + DL NTM+ Y R G ++ + ++ +++++ D T I+I K K
Sbjct: 404 ETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLH 463
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGK 419
A Q M+S G + ++ LGK
Sbjct: 464 LLAYQTTLDMHSKGHRLEEELCSSLIYHLGK 494
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 125/259 (48%), Gaps = 40/259 (15%)
Query: 201 NVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRA-NEARRLLSEFR 259
N +++ L KNG + + + +F ++R G P+V+TYN L+ G K + +A L+ E
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 260 EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVV 319
G + +++ + TV+ C GR E+ + +M+ +G++ + + Y +++ + G
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIII 379
+ADE+ +M S G+ P+ T++ +Y + G D + EL+ ++E
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE--------------- 334
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR--- 436
S G+ N + ++DGL KAG ++ A F+ M+ +
Sbjct: 335 --------------------SAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVR 374
Query: 437 -DSFTYTILVHNLCRARRF 454
D + +I++ LCR++RF
Sbjct: 375 SDGYANSIMISALCRSKRF 393
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 160/373 (42%), Gaps = 47/373 (12%)
Query: 60 NICIASMCKAKQLDKAECV-LIDGVKL-GVLPDVVTFNTLI-------DAYCRFVSF--- 107
N ++ + K +LD C+ L D +K G+ PDVVT+NTL+ + Y + +
Sbjct: 170 NSILSCLVKNGKLD--SCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGE 227
Query: 108 --------------------------DAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGL 141
+ +++MK G +P++ Y+SL++ KG
Sbjct: 228 LPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGD 287
Query: 142 FPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYN 201
+ + +M + P+ L+ Y + G+ D + + + L SA + Y
Sbjct: 288 YKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSE-LESAGYAENEMPYC 346
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
++++GL K G + A S+F +++ +G + + +I+ LC+++R EA+ LS E
Sbjct: 347 MLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKE-LSRDSET 405
Query: 262 GHEPNAITFTTVMNCCF-RCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVE 320
+E + M C + R G +E + ++ +M + + D + ++ +K +
Sbjct: 406 TYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLL 465
Query: 321 ADEIAEQMMSNG--VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
A + M S G +E +L S ++IY + EA + + + + H I
Sbjct: 466 AYQTTLDMHSKGHRLEEELCS--SLIYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKI 523
Query: 379 IHGLCKAKRLNEA 391
+H L + L +A
Sbjct: 524 LHILIQGNLLKDA 536
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 97/228 (42%), Gaps = 1/228 (0%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
R ++N ++ V+G S + + + S KA+ ++ + +G++P+ V
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
TL+ Y + FD E+L ++ AG + + Y LM G + G +FD M
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN 215
+R D ++ +I++ R EA + +D + E N M+ C+ G + +
Sbjct: 372 GVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYE-KCDLVMLNTMLCAYCRAGEMES 430
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
+ M + + + P+ T++ LI K + A + + GH
Sbjct: 431 VMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGH 478
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 152/329 (46%), Gaps = 7/329 (2%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
F LI Y + S D +V ++ + S N+L++ V G FD
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
+ +RP+ S+NIL+ + + A +VF D +L E PS TYN +I LC+N +
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVF-DEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
A S+ ++ ++ P +T+ L+ GLC NEA++L+ + G +P + + +
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
M+ + GR+++ +L EM+ + D Y +V L RV EA + +M G
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
+P+ A+Y MI + R D L +++ + T ++ GL K L+ A
Sbjct: 358 KPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACF 417
Query: 394 HLDHM--NSLGFGF----NLVASNCVLDG 416
L+ M +L FG NL++ C+ DG
Sbjct: 418 VLEVMGKKNLSFGSGAWQNLLSDLCIKDG 446
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 134/271 (49%), Gaps = 3/271 (1%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVK-LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM 117
LN I + +L+KA+ DG K + + P+ V+FN LI + ++A C+V + M
Sbjct: 154 LNTLINVLVDNGELEKAKS-FFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEM 212
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
E + P V++YNSL+ R + + MI+ IRP+ ++ +LM G
Sbjct: 213 LEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEY 272
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
+EA ++ D+ P Y ++++ L K G + A + +++R P+V+ YN
Sbjct: 273 NEAKKLMFDMEYRG-CKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNI 331
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
L+N LC R EA R+L+E + G +PNA T+ +++ R + GL +L M +
Sbjct: 332 LVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASR 391
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
+ + +VA L+K G + A + E M
Sbjct: 392 HCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 172/375 (45%), Gaps = 15/375 (4%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
++G D ++++LI + +FDA ++L ++ + + L+ + G
Sbjct: 74 EMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVD 133
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVF---KDVLLSAETDPSTATY 200
+ +F K+ + + S N L++ G ++A F KD+ L P++ ++
Sbjct: 134 KAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR----PNSVSF 189
Query: 201 NVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
N++I G A +F + P V+TYN+LI LC+ +A+ LL + +
Sbjct: 190 NILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIK 249
Query: 261 AGHEPNAITFTTVMN--CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV 318
PNA+TF +M CC G + +++ +M +G Y +++ L K GR+
Sbjct: 250 KRIRPNAVTFGLLMKGLCCK--GEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRI 307
Query: 319 VEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
EA + +M ++PD+ YN ++ + RV EA ++ +++ +G + T+ ++
Sbjct: 308 DEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMM 367
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD- 437
I G C+ + + + L+ M + C++ GL K G++D A E M ++
Sbjct: 368 IDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427
Query: 438 ---SFTYTILVHNLC 449
S + L+ +LC
Sbjct: 428 SFGSGAWQNLLSDLC 442
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 134/321 (41%), Gaps = 1/321 (0%)
Query: 113 VLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYF 172
+ + +E G D SY+SL+ + F + + +R + L+ Y
Sbjct: 68 LFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYG 127
Query: 173 RLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEV 232
+ G D+A VF + S + + + N +IN L NG + A S F + P
Sbjct: 128 KAGSVDKAIDVFHKIT-SFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNS 186
Query: 233 LTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTE 292
+++N LI G A ++ E E +P+ +T+ +++ R + + +L +
Sbjct: 187 VSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLED 246
Query: 293 MRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGR 352
M K + + ++ L G EA ++ M G +P L +Y ++ ++GR
Sbjct: 247 MIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGR 306
Query: 353 VDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNC 412
+DEA L+ +++K D + I+++ LC R+ EA + L M G N
Sbjct: 307 IDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRM 366
Query: 413 VLDGLGKAGHIDRALKFFEGM 433
++DG + D L M
Sbjct: 367 MIDGFCRIEDFDSGLNVLNAM 387
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 126/309 (40%), Gaps = 43/309 (13%)
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR---------------- 259
ALS+F Q GF + +Y++LI L K+R + ++L R
Sbjct: 65 ALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQ 124
Query: 260 ---EAGHEPNAI-TFTTVMNCCFRCGRLEQGLEILT-------EMRSKGYTFDG------ 302
+AG AI F + + F C R Q L L E+ FDG
Sbjct: 125 HYGKAGSVDKAIDVFHKITS--FDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 303 ----FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
++ ++ + A ++ ++M+ V+P + +YN++I R + +A
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
L++ + K+ + T +++ GLC NEA + + M G LV ++ LG
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 419 KAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKA 474
K G ID A M+ R D Y ILV++LC R A + L G + A
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 475 TRRAVIDGL 483
T R +IDG
Sbjct: 363 TYRMMIDGF 371
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 202/445 (45%), Gaps = 51/445 (11%)
Query: 49 VKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYC-RFVSF 107
+K R+LS+ N ++S K +D A +L + G+ PD+VT+N+L+ Y + +S
Sbjct: 150 MKDRNLSS--WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSK 207
Query: 108 DAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNIL 167
DA VL+RM+ AGL P S +SL+ G + + ++ +++ DV+ L
Sbjct: 208 DA-IAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTL 266
Query: 168 MHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRG 227
+ Y + G A VF ++ A+ + +N +++GL + +A ++ +++ G
Sbjct: 267 IDMYIKTGYLPYARMVFD--MMDAK---NIVAWNSLVSGLSYACLLKDAEALMIRMEKEG 321
Query: 228 FVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGL 287
P+ +T+N+L +G + +A ++ + +E G PN +++T + + C + G L
Sbjct: 322 IKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNAL 381
Query: 288 EILTEMRSKGYTFDGFAYCT-------------------------------VVAALV--- 313
++ +M+ +G + T V ALV
Sbjct: 382 KVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMY 441
Query: 314 -KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ 372
K+G + A EI + + LAS+N M+ Y GR +E + + + G D
Sbjct: 442 GKSGDLQSAIEIFWGIKNK----SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDA 497
Query: 373 YTHTIIIHGLCKAKRL-NEAVQHLDHMNS-LGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
T T ++ +CK L E ++ D M S G + +C++D LG++G++D A F
Sbjct: 498 ITFTSVL-SVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFI 556
Query: 431 EGMEVRDSFTYTILVHNLCRARRFL 455
+ M ++ T + C+ R L
Sbjct: 557 QTMSLKPDATIWGAFLSSCKIHRDL 581
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 177/396 (44%), Gaps = 46/396 (11%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
++LG+ +V N+LI Y R + +V MK+ L+ S+NS++S + G
Sbjct: 116 LRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKLGYV 171
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
+ + D+M ++PD+ ++N L+ Y G+ +A V K + + A PST++ +
Sbjct: 172 DDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI-AGLKPSTSSISS 230
Query: 203 MINGLCKNGY-------------------VHNALSMFRNLQRRGFVP------------E 231
++ + + G+ V+ ++ + G++P
Sbjct: 231 LLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKN 290
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILT 291
++ +N+L++GL A +A L+ + G +P+AIT+ ++ + G+ E+ L+++
Sbjct: 291 IVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIG 350
Query: 292 EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG 351
+M+ KG + ++ + + K G A ++ +M GV P+ A+ +T++ +
Sbjct: 351 KMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLS 410
Query: 352 RVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASN 411
+ E+ ++ D Y T ++ K+ L A++ + + +L + N
Sbjct: 411 LLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK----SLASWN 466
Query: 412 CVLDGLGKAGHIDRALKFFE-----GMEVRDSFTYT 442
C+L G G + + F GME D+ T+T
Sbjct: 467 CMLMGYAMFGRGEEGIAAFSVMLEAGME-PDAITFT 501
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 154/345 (44%), Gaps = 9/345 (2%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D + +N ++ R +++ E+ M+ +G + L+ K F +
Sbjct: 53 DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIH 112
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
++ + +V N L+ Y R G + + +VF + D + +++N +++ K
Sbjct: 113 GYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSM-----KDRNLSSWNSILSSYTK 167
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
GYV +A+ + ++ G P+++T+N+L++G + +A +L + AG +P+ +
Sbjct: 168 LGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
++++ G L+ G I + +D + T++ +KTG + A + + M
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
+ ++ ++N+++ + +A L+ ++EKEG D T + G +
Sbjct: 288 AK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPE 343
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
+A+ + M G N+V+ + G K G+ ALK F M+
Sbjct: 344 KALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 131/290 (45%), Gaps = 34/290 (11%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
R +H VT+ +V + F+N A +D+A VL + ++GV + +T+N
Sbjct: 446 RNSHPDEVTYTTVV------SAFVN--------AGLMDRARQVLAEMARMGVPANRITYN 491
Query: 96 TLIDAYCRFVSFDAGCEVLERMKE-AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
L+ YC+ + D ++L M E AG+ PDV+SYN ++ G + L F++M
Sbjct: 492 VLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRT 551
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVH 214
I P SY LM + G P ANRVF +++ +N+++ G C+ G +
Sbjct: 552 RGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIE 611
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE-------------- 260
+A + ++ GF P V TY +L NG+ +AR+ +A L E +E
Sbjct: 612 DAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSS 671
Query: 261 -----AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAY 305
+P+ T+ + C R ++ LEI+ M G + Y
Sbjct: 672 SDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKY 721
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 128/331 (38%), Gaps = 57/331 (17%)
Query: 89 PDVVTFNTLIDAYC---RFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
PD + TL+ Y R E + R + PD ++Y +++S V GL
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+ +M + + +YN+L+ Y + D A + +++ A +P +YN++I+
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVP----------------------------------- 230
G AL+ F ++ RG P
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591
Query: 231 -EVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
+++ +N L+ G C+ +A+R++S +E G PN T+ ++ N + + L +
Sbjct: 592 VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLL 651
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
E++ + C V K + + A M+ +PD +T+ + R
Sbjct: 652 WKEIKER---------CAVKK---KEAPSDSSSDPAPPML----KPDEGLLDTLADICVR 695
Query: 350 QGRVDEALELVDQIEKEG--PGNDQYTHTII 378
+ALE++ +E+ G P +Y +
Sbjct: 696 AAFFKKALEIIACMEENGIPPNKTKYKKIYV 726
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 9/235 (3%)
Query: 228 FVPEVLTYNALINGLCKARRANEARRLLSEFR---EAGHEPNAITFTTVMNCCFRCGRLE 284
F P+ Y L+ G K R + R+L R + P+ +T+TTV++ G ++
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 285 QGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN-GVEPDLASYNTM 343
+ ++L EM G + Y ++ K ++ A+++ +M + G+EPD+ SYN +
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDH-MNSLG 402
I AL +++ G + ++T ++ + + A + D MN
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 403 FGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSF----TYTILVHNLCRARR 453
+L+A N +++G + G I+ A + M+ + TY L + + +AR+
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARK 644
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM---SNGVEPDLASYNTMIYLYFRQGR 352
K + D Y T++ +K GRV + + E M PD +Y T++ + G
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 353 VDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN-SLGFGFNLVASN 411
+D A +++ ++ + G ++ T+ +++ G CK +++ A L M G ++V+ N
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYN 527
Query: 412 CVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILV 445
++DG AL FF M R +YT L+
Sbjct: 528 IIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 167/368 (45%), Gaps = 5/368 (1%)
Query: 68 KAKQLDKAECVLIDGVK-LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDV 126
K +Q D A LID +K V + TF LI Y R RM++ G PD
Sbjct: 163 KVRQFDLA-WHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDK 221
Query: 127 ISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKD 186
I+++ ++S RK FD + + PDV Y L+ + R G EA +VFK+
Sbjct: 222 IAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKE 280
Query: 187 VLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKAR 246
+ L A +P+ TY+++I+ LC+ G + A +F ++ G P +T+N L+ KA
Sbjct: 281 MKL-AGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339
Query: 247 RANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYC 306
R + ++ ++ ++ G EP+ IT+ ++ R LE +++L M K + +
Sbjct: 340 RTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFN 399
Query: 307 TVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE 366
T+ + K V A + +MM EP+ +YN ++ ++ D L++ +++ +
Sbjct: 400 TIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDK 459
Query: 367 GPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM-NSLGFGFNLVASNCVLDGLGKAGHIDR 425
+ T+ +++ C N A + M +L VL L +AG + +
Sbjct: 460 EVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKK 519
Query: 426 ALKFFEGM 433
+ E M
Sbjct: 520 HEELVEKM 527
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 154/327 (47%), Gaps = 10/327 (3%)
Query: 129 YNSL--MSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKD 186
YN + +SG VR+ F + H+ D M + + ++ IL+ Y R G+ EA F +
Sbjct: 154 YNEMIDLSGKVRQ--FDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCF-N 210
Query: 187 VLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKAR 246
+ P ++++I+ L + A S F +L+ R F P+V+ Y L+ G C+A
Sbjct: 211 RMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAG 269
Query: 247 RANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYC 306
+EA ++ E + AG EPN T++ V++ RCG++ + ++ +M G + +
Sbjct: 270 EISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFN 329
Query: 307 TVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE 366
++ VK GR + ++ QM G EPD +YN +I + R ++ A+++++ + K+
Sbjct: 330 NLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
Query: 367 GPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRA 426
+ T I + K + +N A + M N V N ++ + D
Sbjct: 390 KCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMV 449
Query: 427 LKFFEGMEVRDSF----TYTILVHNLC 449
LK + M+ ++ TY +LV C
Sbjct: 450 LKMKKEMDDKEVEPNVNTYRLLVTMFC 476
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 164/360 (45%), Gaps = 4/360 (1%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
+N +ID + FD +++ MK + + ++ L+ VR GL +H F++M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
+ PD +++I++ R EA F L +P Y ++ G C+ G +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS--LKDRFEPDVIVYTNLVRGWCRAGEI 271
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
A +F+ ++ G P V TY+ +I+ LC+ + + A + ++ ++G PNAITF +
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
M + GR E+ L++ +M+ G D Y ++ A + + A ++ M+
Sbjct: 332 MRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC 391
Query: 334 EPDLASYNTMIYLYFRQGR-VDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
E + +++NT I+ Y + R V+ A + ++ + + T+ I++ +K + +
Sbjct: 392 EVNASTFNT-IFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVL 450
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRAR 452
+ M+ N+ ++ GH + A K F+ M T ++ ++ + A+
Sbjct: 451 KMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQ 510
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 147/310 (47%), Gaps = 3/310 (0%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
+I I+++ + ++ +A+ D +K PDV+ + L+ +CR +V + MK
Sbjct: 224 FSIVISNLSRKRRASEAQS-FFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
AG+ P+V +Y+ ++ R G +F M++S P+ ++N LM + + G +
Sbjct: 283 LAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTE 342
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+ +V+ + +P T TYN +I C++ + NA+ + + ++ T+N +
Sbjct: 343 KVLQVYNQ-MKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTI 401
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
+ K R N A R+ S+ EA EPN +T+ +M + L++ EM K
Sbjct: 402 FRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEV 461
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG-VEPDLASYNTMIYLYFRQGRVDEAL 357
+ Y +V G A ++ ++M+ + P L+ Y ++ R G++ +
Sbjct: 462 EPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHE 521
Query: 358 ELVDQIEKEG 367
ELV+++ ++G
Sbjct: 522 ELVEKMIQKG 531
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ C+A ++ +AE V + G+ P+V T++ +IDA CR +V M ++G
Sbjct: 262 VRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGC 321
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P+ I++N+LM V+ G L ++++M + PD +YN L+ + R + A +
Sbjct: 322 APNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVK 381
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
V + ++ + + + +T+N + + K V+ A M+ + P +TYN L+
Sbjct: 382 VL-NTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMF 440
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM-RSKGYTFD 301
++ + ++ E + EPN T+ ++ G ++ EM K T
Sbjct: 441 VGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPS 500
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
Y V+A L + G++ + +E+ E+M+ G+
Sbjct: 501 LSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT 96
I+ ++ V + + G + +I I ++C+ Q+ +A V D + G P+ +TFN
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
L+ + + + +V +MK+ G PD I+YN L+ R + + + MI+ +
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
+ ++N + + + A+R++ ++ A+ +P+T TYN+++ +
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSK-MMEAKCEPNTVTYNILMRMFVGSKSTDMV 449
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEF-REAGHEPNAITFTTVMN 275
L M + + + P V TY L+ C N A +L E E P+ + V+
Sbjct: 450 LKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLA 509
Query: 276 CCFRCGRLEQGLEILTEMRSKG 297
R G+L++ E++ +M KG
Sbjct: 510 QLRRAGQLKKHEELVEKMIQKG 531
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 35/201 (17%)
Query: 68 KAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVL------------- 114
KA + +K V KLG PD +T+N LI+A+CR + + +VL
Sbjct: 337 KAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNAS 396
Query: 115 ----------------------ERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
+M EA P+ ++YN LM V M L M +M
Sbjct: 397 TFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEM 456
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
+ E+ P+V +Y +L+ + +G + A ++FK+++ PS + Y +++ L + G
Sbjct: 457 DDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQ 516
Query: 213 VHNALSMFRNLQRRGFVPEVL 233
+ + + ++G V L
Sbjct: 517 LKKHEELVEKMIQKGLVARPL 537
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 2/295 (0%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG +T N + + K+ +++ E + + G+ P T+N L+DAY R + D
Sbjct: 373 KGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDI 432
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVR-KGLFPMTLHMFDKMIESEIRPDVWSYNILM 168
+L M++ GL P+V SY L+S R K + M F +M + ++P SY L+
Sbjct: 433 VETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALI 492
Query: 169 HCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF 228
H Y G ++A F+++ PS TY +++ ++G + +++ + R
Sbjct: 493 HAYSVSGWHEKAYASFEEMCKEG-IKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKI 551
Query: 229 VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLE 288
+TYN L++G K EAR ++SEF + G +P+ +T+ +MN R G+ + +
Sbjct: 552 KGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQ 611
Query: 289 ILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
+L EM + D Y T++ A V+ A + M+ +G PD SY +
Sbjct: 612 LLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 147/333 (44%), Gaps = 3/333 (0%)
Query: 61 ICIASMCKAKQLDKAECVLIDGV-KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
I I ++ KA + K + + + + GV F L+ ++C + + M++
Sbjct: 313 ILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEK 372
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G+ + I YN+LM + +F +M + ++P +YNILM Y R PD
Sbjct: 373 KGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDI 432
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN-ALSMFRNLQRRGFVPEVLTYNAL 238
+ ++ + +P+ +Y +I+ + + + A F +++ G P +Y AL
Sbjct: 433 VETLLRE-MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTAL 491
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I+ + +A E + G +P+ T+T+V++ R G + +EI M +
Sbjct: 492 IHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKI 551
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
Y T++ K G +EA ++ + G++P + +YN ++ Y R G+ + +
Sbjct: 552 KGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQ 611
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
L+ ++ D T++ +I+ + + A
Sbjct: 612 LLKEMAALNLKPDSITYSTMIYAFVRVRDFKRA 644
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 167/382 (43%), Gaps = 4/382 (1%)
Query: 57 KFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRF-VSFDAGCEVLE 115
+ N I+ + +++ D A V K+ V PD VT LI + S E+ E
Sbjct: 274 RLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFE 333
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
+M E G+ + L+ +GL L + +M + IR + YN LM Y +
Sbjct: 334 KMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSN 393
Query: 176 MPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTY 235
+E +F + + PS ATYN++++ + ++ R ++ G P V +Y
Sbjct: 394 HIEEVEGLFTE-MRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSY 452
Query: 236 NALINGLCKARRANE-ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
LI+ + ++ ++ A ++ G +P++ ++T +++ G E+ EM
Sbjct: 453 TCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMC 512
Query: 295 SKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
+G Y +V+ A ++G + EI + M+ ++ +YNT++ + +QG
Sbjct: 513 KEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYI 572
Query: 355 EALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL 414
EA ++V + K G T+ ++++ + + + Q L M +L + + + ++
Sbjct: 573 EARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMI 632
Query: 415 DGLGKAGHIDRALKFFEGMEVR 436
+ RA F+ M V+
Sbjct: 633 YAFVRVRDFKRAF-FYHKMMVK 653
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 108/255 (42%), Gaps = 3/255 (1%)
Query: 195 PSTATYNVMINGLCKNG-YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARR 253
P T ++I L K G +F + +G + L+ C EA
Sbjct: 306 PDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALV 365
Query: 254 LLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
+ +E + G N I + T+M+ + +E+ + TEMR KG Y ++ A
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYA 425
Query: 314 KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV-DEALELVDQIEKEGPGNDQ 372
+ + + + +M G+EP++ SY +I Y R ++ D A + +++K G
Sbjct: 426 RRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSS 485
Query: 373 YTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEG 432
+++T +IH + +A + M G ++ VLD ++G + ++ ++
Sbjct: 486 HSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKL 545
Query: 433 MEVRDSFTYTILVHN 447
M +R+ T + +N
Sbjct: 546 M-LREKIKGTRITYN 559
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 198/500 (39%), Gaps = 71/500 (14%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + +C ++ A ++ D G LPDVVTF TLI YC + +V + M+
Sbjct: 166 NRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRV 225
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY-----NILMHCYFRL 174
G+ P+ ++ + L+ G L M D ++ ++W Y + M
Sbjct: 226 CGIRPNSLTLSVLIGG---------FLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFA 276
Query: 175 GMPDEANR--VFKDVLLSAETDPSTATYNV------MINGLCKNGYVHNALSMFRNLQRR 226
+ D R F D+ AE + NV MI+ LC+ H A + ++ +
Sbjct: 277 NLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSK 336
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
G P +YNA+I+GLCK A +LL E E P+ T+ +M C L+ G
Sbjct: 337 GLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESL--CKELDTG 394
Query: 287 -------------------------------------LEILTEMRSKGYTFDGFAYCTVV 309
L +L M D + TV+
Sbjct: 395 KARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVI 454
Query: 310 AALVKTGRVVEADEIAEQMMSNGV-EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG- 367
L K GRV +A ++ + MM+ PD + NT++ QGR +EAL++++++ E
Sbjct: 455 NGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENK 514
Query: 368 --PGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDR 425
PG Y +I GL K + +EA+ + + ++DGL +D
Sbjct: 515 IKPGVVAY--NAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDM 572
Query: 426 ALKFFEGM----EVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVID 481
A KF++ + D+F Y + LC++ A L G VI
Sbjct: 573 AKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIA 632
Query: 482 GLISDGLKNEAKKVRLKIRK 501
GLK EA ++ ++RK
Sbjct: 633 ECSRSGLKREAYQILEEMRK 652
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 159/357 (44%), Gaps = 7/357 (1%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
+ +ID+ CR+ ++ MK GL P SYN+++ G + G + ++
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS 369
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
E E P ++Y +LM + +A V +++L E T YN+ + GLC
Sbjct: 370 EFEFFPSEYTYKLLMESLCKELDTGKARNVL-ELMLRKEGADRTRIYNIYLRGLCVMDNP 428
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH-EPNAITFTT 272
L++ ++ + P+ T N +INGLCK R ++A ++L + P+A+T T
Sbjct: 429 TEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNT 488
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGF-AYCTVVAALVKTGRVVEADEIAEQMMSN 331
VM GR E+ L++L + + G AY V+ L K + EA + Q+
Sbjct: 489 VMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKA 548
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
V D +Y +I +VD A + D + +D + + + GLC++ L++A
Sbjct: 549 SVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDA 608
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM----EVRDSFTYTIL 444
L + G N+V N V+ ++G A + E M + D+ T+ IL
Sbjct: 609 CHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 150/352 (42%), Gaps = 2/352 (0%)
Query: 29 ITSFLTQRITH-SKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGV 87
I S R H + + + + KG N I +CK +A +L +G +
Sbjct: 314 IDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEF 373
Query: 88 LPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLH 147
P T+ L+++ C+ + VLE M YN + G L+
Sbjct: 374 FPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILN 433
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
+ M++ + RPD ++ N +++ ++G D+A +V D++ P T N ++ GL
Sbjct: 434 VLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGL 493
Query: 208 CKNGYVHNALSMF-RNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
G AL + R + P V+ YNA+I GL K + +EA + + +A +
Sbjct: 494 LAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTAD 553
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
+ T+ +++ +++ + ++ D F Y + L ++G + +A
Sbjct: 554 STTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLY 613
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
+ +G P++ YNT+I R G EA ++++++ K G D T I+
Sbjct: 614 DLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 169/399 (42%), Gaps = 12/399 (3%)
Query: 108 DAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNIL 167
D +L+ + G PD ++ +S++ G F F + S PD + N++
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 168 MHCYFRLGMPDEANRVFKDVL-LSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
+ P V ++ E PS YN ++N LC V +A + +++ R
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
G +P+V+T+ LI G C+ R A ++ E R G PN++T + ++ + +E G
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETG 251
Query: 287 LEILTEM-----RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM-MSNGVEPDLASY 340
+++ E+ + A+ +V ++ + G + EIAE M + V + A Y
Sbjct: 252 RKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFA-Y 310
Query: 341 NTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNS 400
MI R R A +V ++ +G + ++ IIHGLCK A Q L+ +
Sbjct: 311 GHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSE 370
Query: 401 LGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD----SFTYTILVHNLCRARRFLC 456
F + +++ L K +A E M ++ + Y I + LC
Sbjct: 371 FEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTE 430
Query: 457 ASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
LV+ LQ + + T VI+GL G ++A KV
Sbjct: 431 ILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKV 469
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 1/286 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
+ S+CK KA VL ++ +N + C + VL M +
Sbjct: 384 MESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDC 443
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEI-RPDVWSYNILMHCYFRLGMPDEAN 181
PD + N++++G + G + + D M+ + PD + N +M G +EA
Sbjct: 444 RPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEAL 503
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
V V+ + P YN +I GL K A+S+F L++ + TY +I+G
Sbjct: 504 DVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDG 563
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
LC + + A++ + +A + + + G L L ++ G +
Sbjct: 564 LCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPN 623
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLY 347
Y TV+A ++G EA +I E+M NG PD ++ + L+
Sbjct: 624 VVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLH 669
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 123/311 (39%), Gaps = 47/311 (15%)
Query: 224 QRRGFVPEVLTYNALINGLCKARR-ANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
RR V + + I+ +C RR +EA R+L G+ P+++ ++V++ GR
Sbjct: 46 DRRRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGR 105
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE--PDLASY 340
++ + G+ D ++A L+ + V + +++ E P L +Y
Sbjct: 106 FDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNY 165
Query: 341 NTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM-- 398
N ++ RV +A +LV + G D T T +I G C+ + L A + D M
Sbjct: 166 NRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRV 225
Query: 399 -----NSL-------GF--------------------------GFNLVASNCVLDGLGKA 420
NSL GF A ++D + +
Sbjct: 226 CGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCRE 285
Query: 421 GHIDRALKFFEGMEVRDS----FTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATR 476
G+ + + E M + +S F Y ++ +LCR RR A++ + G + + +
Sbjct: 286 GYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSY 345
Query: 477 RAVIDGLISDG 487
A+I GL DG
Sbjct: 346 NAIIHGLCKDG 356
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 152/315 (48%), Gaps = 13/315 (4%)
Query: 148 MFDKMIES------EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYN 201
++D +IE+ EI V + I+ Y R +P EA R F + ++ P +
Sbjct: 121 LWDFLIEAREYNYFEISSKV--FWIVFRAYSRANLPSEACRAF-NRMVEFGIKPCVDDLD 177
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
+++ LC +V++A F + G VP TY+ L+ G + R A+ AR++ E E
Sbjct: 178 QLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLER 237
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
+ + + +++ + G ++ G ++ EM + G D +++ + A G V A
Sbjct: 238 NCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSA 297
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHG 381
++ ++M + P++ ++N +I + +VD+A L+D++ ++G D +T+ I+
Sbjct: 298 YKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAY 357
Query: 382 LCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSF-- 439
C +N A + L M+ + N VL L + G DRA + +EGM R +
Sbjct: 358 HCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPT 417
Query: 440 --TYTILVHNLCRAR 452
TYT+++H L R +
Sbjct: 418 VATYTVMIHGLVRKK 432
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 2/278 (0%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
L+ + S+C K ++ A+ G++P T++ L+ + R +V + M
Sbjct: 176 LDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEML 235
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
E D+++YN+L+ + G MF +M ++PD +S+ I +H Y G
Sbjct: 236 ERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVH 295
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
A +V D + + P+ T+N +I LCKN V +A + + ++G P+ TYN++
Sbjct: 296 SAYKVL-DRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSI 354
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
+ C N A +LLS P+ T+ V+ R GR ++ EI M + +
Sbjct: 355 MAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKF 414
Query: 299 TFDGFAYCTVVAALV-KTGRVVEADEIAEQMMSNGVEP 335
Y ++ LV K G++ EA E M+ G+ P
Sbjct: 415 YPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 2/311 (0%)
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
F + AY R C RM E G+ P V + L+ K F K
Sbjct: 140 VFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 199
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
I P +Y+IL+ + R+ A +VF D +L YN +++ LCK+G
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVF-DEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
V MF+ + G P+ ++ I+ C A + A ++L + PN TF
Sbjct: 259 VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
++ + +++ +L EM KG D + Y +++A V A ++ +M
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK-RLNEA 391
PD +YN ++ L R GR D A E+ + + + T+T++IHGL + K +L EA
Sbjct: 379 CLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEA 438
Query: 392 VQHLDHMNSLG 402
++ + M G
Sbjct: 439 CRYFEMMIDEG 449
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 135/286 (47%), Gaps = 2/286 (0%)
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
F++M+E I+P V + L+H + A F PS TY++++ G
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK-GFGIVPSAKTYSILVRGWA 219
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
+ A +F + R V ++L YNAL++ LCK+ + ++ E G +P+A
Sbjct: 220 RIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAY 279
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
+F ++ G + ++L M+ + + + ++ L K +V +A + ++M
Sbjct: 280 SFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEM 339
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
+ G PD +YN+++ + V+ A +L+ ++++ D++T+ +++ L + R
Sbjct: 340 IQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRF 399
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGL-GKAGHIDRALKFFEGM 433
+ A + + M+ F + ++ GL K G ++ A ++FE M
Sbjct: 400 DRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 445
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N I ++CK +++D A +L + ++ G PD T+N+++ +C + ++L RM
Sbjct: 316 FNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMD 375
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFR-LGMP 177
PD +YN ++ +R G F +++ M E + P V +Y +++H R G
Sbjct: 376 RTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKL 435
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
+EA R F ++++ P + T ++ N L G
Sbjct: 436 EEACRYF-EMMIDEGIPPYSTTVEMLRNRLVGWG 468
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 144/320 (45%), Gaps = 9/320 (2%)
Query: 89 PDVVTFNTLIDAYCRFVSFD---AGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
P ++ + RF S D EVL+ M + G PD + L+ + G
Sbjct: 178 PQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDA 237
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+F+ M ++ + L++ + R+G EA V + A +P Y +++
Sbjct: 238 AKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQ-MNEAGFEPDIVDYTNLLS 295
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
G G + +A + R+++RRGF P Y LI LCK R EA ++ E E
Sbjct: 296 GYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEA 355
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
+ +T+T +++ + G++++ +L +M KG Y ++ A K E E+
Sbjct: 356 DVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELM 415
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG--PGNDQYTHTIIIHGLC 383
E+M PD+ YN +I L + G V EA+ L +++E+ G PG D T I+I+GL
Sbjct: 416 EKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVD--TFVIMINGLA 473
Query: 384 KAKRLNEAVQHLDHMNSLGF 403
L EA H M + G
Sbjct: 474 SQGCLLEASDHFKEMVTRGL 493
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 155/333 (46%), Gaps = 4/333 (1%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
+ + A + KA VL + K G PD F L+DA C+ S ++ E M+
Sbjct: 188 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR-M 246
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
++ + SL+ G R G ++ +M E+ PD+ Y L+ Y G +A
Sbjct: 247 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 306
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
+ +D+ +P+ Y V+I LCK + A+ +F ++R +V+TY AL++
Sbjct: 307 YDLLRDMRRRG-FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
G CK + ++ +L + + G P+ +T+ +M + E+ LE++ +MR Y
Sbjct: 366 GFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP 425
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
D Y V+ K G V EA + +M NG+ P + ++ MI QG + EA +
Sbjct: 426 DIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF 485
Query: 361 DQIEKEGPGN-DQY-THTIIIHGLCKAKRLNEA 391
++ G + QY T ++++ + K K+L A
Sbjct: 486 KEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMA 518
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 184/415 (44%), Gaps = 20/415 (4%)
Query: 91 VVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVIS---YNSLMSGAVRKGLFPMTLH 147
+ + +++ + F A ++E M++ P +I + L+ + +
Sbjct: 147 IEVYKSMVKILSKMRQFGAVWGLIEEMRKE--NPQLIEPELFVVLVQRFASADMVKKAIE 204
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
+ D+M + PD + + L+ + G +A ++F+D+ + + + ++ G
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVN--LRYFTSLLYGW 262
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
C+ G + A + + GF P+++ Y L++G A + +A LL + R G EPNA
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
+T ++ + R+E+ +++ EM D Y +V+ K G++ + + +
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDD 382
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M+ G+ P +Y ++ + ++ +E LEL++++ + D + ++I CK
Sbjct: 383 MIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGE 442
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSF------TY 441
+ EAV+ + M G + +++GL G + A F+ M R F T
Sbjct: 443 VKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTL 502
Query: 442 TILVHNLCRARRFLCASKHLVACLQ----CGFQVLKATRRAVIDGLISDGLKNEA 492
+L++ + + ++ L +K + +C+ C VL T I L S G + EA
Sbjct: 503 KLLLNTVLKDKK-LEMAKDVWSCITSKGACELNVLSWT--IWIHALFSKGYEKEA 554
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 162/353 (45%), Gaps = 10/353 (2%)
Query: 19 HPAILNHENPITSFLTQ-RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAEC 77
P I+++ N ++ + ++ + ++ + +G + + I ++CK ++++A
Sbjct: 284 EPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMK 343
Query: 78 VLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
V ++ + DVVT+ L+ +C++ D VL+ M + GL P ++Y +M
Sbjct: 344 VFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHE 403
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
+K F L + +KM + E PD+ YN+++ +LG EA R++ ++ + P
Sbjct: 404 KKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG-LSPGV 462
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGF--VPEVLTYNALINGLCKARRANEARRLL 255
T+ +MINGL G + A F+ + RG V + T L+N + K ++ A+ +
Sbjct: 463 DTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVW 522
Query: 256 SEFREAGH-EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK 314
S G E N +++T ++ F G ++ EM + + ++ L K
Sbjct: 523 SCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKK 582
Query: 315 TGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
A EI E++ + E +++ +Y R+G D + + ++EG
Sbjct: 583 LYNREFAGEITEKVRNMAAEREMS-----FKMYKRRGVQDLTEKAKSKQDREG 630
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 6/307 (1%)
Query: 54 LSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEV 113
++ ++ + C+ ++ +A+ VL+ + G PD+V + L+ Y ++
Sbjct: 250 VNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDL 309
Query: 114 LERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFR 173
L M+ G P+ Y L+ + + +F +M E DV +Y L+ + +
Sbjct: 310 LRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCK 369
Query: 174 LGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
G D+ V D++ PS TY ++ K L + +++ + P++
Sbjct: 370 WGKIDKCYIVLDDMIKKGLM-PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIG 428
Query: 234 TYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
YN +I CK EA RL +E E G P TF ++N G L + + EM
Sbjct: 429 IYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEM 488
Query: 294 RSKGYTFDGFAYCT---VVAALVKTGRVVEADEIAEQMMSNGV-EPDLASYNTMIYLYFR 349
++G F Y T ++ ++K ++ A ++ + S G E ++ S+ I+ F
Sbjct: 489 VTRG-LFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFS 547
Query: 350 QGRVDEA 356
+G EA
Sbjct: 548 KGYEKEA 554
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 166/348 (47%), Gaps = 4/348 (1%)
Query: 55 STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVL 114
S + ++ I S K +Q K LI+ ++ + +V TF ++ Y R D
Sbjct: 133 SVRAYHMMIESTAKIRQY-KLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAF 191
Query: 115 ERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRL 174
M++ L P+++++N L+S + +F+ M PD +Y+IL+ + +
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKE 250
Query: 175 GMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLT 234
+A VF++ ++ A P TY++M++ LCK G V AL + R++ P
Sbjct: 251 PNLPKAREVFRE-MIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFI 309
Query: 235 YNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
Y+ L++ R EA E +G + + F +++ + R++ +L EM+
Sbjct: 310 YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMK 369
Query: 295 SKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
SKG T + + ++ L++ G EA ++ +M+ EPD +Y +I ++ + ++
Sbjct: 370 SKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEME 428
Query: 355 EALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
A ++ + K+G +T +++I+GLC+ + +A L+ M +G
Sbjct: 429 TADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMG 476
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 134/298 (44%), Gaps = 7/298 (2%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N ++++CK+K + KA+ V + ++ PD T++ L++ + + + EV M
Sbjct: 206 FNGLLSALCKSKNVRKAQEVF-ENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 264
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
+AG PD+++Y+ ++ + G L + M S +P + Y++L+H Y +
Sbjct: 265 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE 324
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
EA F ++ S A +N +I CK + N + + ++ +G P + N +
Sbjct: 325 EAVDTFLEMERSG-MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNII 383
Query: 239 INGLCKARRANEARRLLSEFREAGH--EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
+ L + +EA FR+ EP+A T+T V+ +E ++ MR K
Sbjct: 384 LRHLIERGEKDEA---FDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKK 440
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
G + ++ L + +A + E+M+ G+ P ++ + L ++ R D
Sbjct: 441 GVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERED 498
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 127/317 (40%), Gaps = 56/317 (17%)
Query: 11 FNAAYPFTHPAILNHENPITSFLTQRITHSKNV-----TFRIMVKGRSLSTKFLNICIAS 65
FN + P L N + S L + SKNV F M + +K +I +
Sbjct: 191 FNVMEKYDLPPNLVAFNGLLSALCK----SKNVRKAQEVFENMRDRFTPDSKTYSILLEG 246
Query: 66 MCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLE---------- 115
K L KA V + + G PD+VT++ ++D C+ D ++
Sbjct: 247 WGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPT 306
Query: 116 -------------------------RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFD 150
M+ +G+ DV +NSL+ + +
Sbjct: 307 TFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLK 366
Query: 151 KMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKN 210
+M + P+ S NI++ G DEA VF+ ++ E P TY ++I C+
Sbjct: 367 EMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE--PDADTYTMVIKMFCEK 424
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
+ A +++ ++++G P + T++ LINGLC+ R +A LL E E G P+ +TF
Sbjct: 425 KEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
Query: 271 TTVMNCCFRCGRLEQGL 287
GRL Q L
Sbjct: 485 ----------GRLRQLL 491
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 121/303 (39%), Gaps = 42/303 (13%)
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
S Y++MI K + N R+ + V T+ ++ +A++ +EA
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLI-NAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAF 191
Query: 256 SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT 315
+ + PN + F +++ + + + E+ MR + +T D Y ++ K
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKE 250
Query: 316 GRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL------------------ 357
+ +A E+ +M+ G PD+ +Y+ M+ + + GRVDEAL
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 358 --------------ELVD---QIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNS 400
E VD ++E+ G D +I CKA R+ + L M S
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Query: 401 LGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLC 456
G N + N +L L + G D A F M ++ D+ TYT+++ C +
Sbjct: 371 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMET 429
Query: 457 ASK 459
A K
Sbjct: 430 ADK 432
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 2/195 (1%)
Query: 71 QLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYN 130
+L++A ++ + G+ DV FN+LI A+C+ VL+ MK G+TP+ S N
Sbjct: 322 RLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCN 381
Query: 131 SLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLS 190
++ + +G +F KMI+ PD +Y +++ + + A++V+K +
Sbjct: 382 IILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWK-YMRK 439
Query: 191 AETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANE 250
PS T++V+INGLC+ A + + G P +T+ L L K R +
Sbjct: 440 KGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDV 499
Query: 251 ARRLLSEFREAGHEP 265
+ L + +EP
Sbjct: 500 LKFLNEKMNVLVNEP 514
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 166/357 (46%), Gaps = 8/357 (2%)
Query: 19 HPAILNHENPITSFLTQRITHSKNVTFRIMVKGRSL---STKFLNICIASMCKAKQLDKA 75
HP N +N + + R K TF VK +SL T F N+ + S+ +Q
Sbjct: 149 HPP--NRDNALLVLNSLR-EWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLI 205
Query: 76 ECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSG 135
E + ++ VK GV D +T++T+I R ++ E ERM + GL PD ++Y++++
Sbjct: 206 EEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDV 265
Query: 136 AVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDP 195
+ G L ++++ + + +PD ++++L + G D V ++ + S + P
Sbjct: 266 YSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQE-MKSMDVKP 324
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
+ YN ++ + + G A S+F + G P T AL+ KAR A +A +L
Sbjct: 325 NVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLW 384
Query: 256 SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR-SKGYTFDGFAYCTVVAALVK 314
E + + I + T++N C G E+ + +M+ S D F+Y ++
Sbjct: 385 EEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGS 444
Query: 315 TGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGND 371
G+ +A E+ E+M+ GV+ ++ ++ + R+D+ + + D K G D
Sbjct: 445 GGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 154/360 (42%), Gaps = 47/360 (13%)
Query: 114 LERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFR 173
LE +K+ G+ D I+Y+++++ A R L+ + F++M ++ + PD +Y+ ++ Y +
Sbjct: 210 LEMVKD-GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSK 268
Query: 174 LGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
G +E +++ + + P ++V+ + G + + ++ P V+
Sbjct: 269 SGKVEEVLSLYERAVATG-WKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVV 327
Query: 234 TYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
YN L+ + +A + AR L +E EAG PN T T ++ + L++ EM
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM-SNGVEPDLASYNTMIYLYFRQGR 352
++K + D Y T++ G EA+ + M S PD SY M+ +Y G+
Sbjct: 388 KAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGK 447
Query: 353 VDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNC 412
++ A++ + M G N++ C
Sbjct: 448 AEK-----------------------------------AMELFEEMLKAGVQVNVMGCTC 472
Query: 413 VLDGLGKAGHIDRALKFFE-----GMEVRDSFTYTIL-VHNLCRARRFLCASKHLVACLQ 466
++ LGKA ID + F+ G++ D +L V LC + ++ ++ACL+
Sbjct: 473 LVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSE---DAEKVMACLE 529
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 121/280 (43%), Gaps = 5/280 (1%)
Query: 197 TATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
T YNV + L M + + G + +TY+ +I + N+A
Sbjct: 186 TIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFE 245
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
+ G P+ +T++ +++ + G++E+ L + + G+ D A+ + + G
Sbjct: 246 RMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG 305
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHT 376
+ ++M S V+P++ YNT++ R G+ A L +++ + G ++ T T
Sbjct: 306 DYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLT 365
Query: 377 IIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR 436
++ KA+ +A+Q + M + + + + N +L+ G + A + F M+
Sbjct: 366 ALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKES 425
Query: 437 -----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQV 471
D+F+YT +++ + A + L+ G QV
Sbjct: 426 VQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQV 465
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 176/401 (43%), Gaps = 7/401 (1%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
R+ + N+ ++ G + T N I + L +AE +L + G+ PD T+N
Sbjct: 320 RLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYN 379
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
L+ + +A E ++++ GL PD +++ +++ ++ + + +M +
Sbjct: 380 ILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRN 439
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN 215
IR D S ++M Y G+ +A +F+ L S+ T +I+ + G
Sbjct: 440 SIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVL--SSTTLAAVIDVYAEKGLWVE 497
Query: 216 ALSMF---RNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
A ++F RN+ G +VL YN +I KA+ +A L + G P+ T+ +
Sbjct: 498 AETVFYGKRNMS--GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNS 555
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
+ +++ IL EM G Y ++A+ V+ G + +A ++ E M G
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
V+P+ Y ++I + G V+EA++ +E+ G ++ T +I K L EA
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
+ D M G ++ ASN +L G + A F +
Sbjct: 676 RVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNAL 716
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 201/466 (43%), Gaps = 30/466 (6%)
Query: 56 TKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLE 115
T N I KA +L+ A + + +K GV D VTFNT+I +L+
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
+M+E G++PD +YN L+S G L + K+ + + PD ++ ++H +
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 176 MPDEANRVFKDVLLSAETDPSTATYN-----VMINGLCKNGYVHNALSMFRNLQRRGFVP 230
M E V AE D ++ + V++ G V A ++F Q +
Sbjct: 425 MVAEVEAVI------AEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLS 478
Query: 231 EVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL-EQGLEI 289
T A+I+ + EA + R + N + VM + +L E+ L +
Sbjct: 479 ST-TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSL 537
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
M+++G D Y ++ L V EA I +M+ +G +P +Y MI Y R
Sbjct: 538 FKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVR 597
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
G + +A++L + +EK G ++ + +I+G ++ + EA+Q+ M G N +
Sbjct: 598 LGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIV 657
Query: 410 SNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGF 469
++ K G ++ A + ++ M+ + +++ LCA +V+ + F
Sbjct: 658 LTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS----LCADLGIVSEAESIF 713
Query: 470 QVLK----------ATRRAVIDGLISDGLKNEAKKVRLKIRKAQLL 505
L+ AT + G+ G+ +EA +V ++R++ LL
Sbjct: 714 NALREKGTCDVISFATMMYLYKGM---GMLDEAIEVAEEMRESGLL 756
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 151/349 (43%), Gaps = 38/349 (10%)
Query: 72 LDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNS 131
+D+A+ +L + + G P T+ +I +Y R ++ E M++ G+ P+ + Y S
Sbjct: 566 VDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGS 625
Query: 132 LMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSA 191
L++G G+ + F M E ++ + L+ Y ++G +EA RV+ D + +
Sbjct: 626 LINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVY-DKMKDS 684
Query: 192 ETDPSTATYNVMINGLCKN-GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANE 250
E P A N M++ LC + G V A S+F L+ +G +V+++ ++ +E
Sbjct: 685 EGGPDVAASNSMLS-LCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDE 742
Query: 251 ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR-SKGYTFDGFAYCTVV 309
A + E RE+G + +F VM C G+L + E+ EM + D + T+
Sbjct: 743 AIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLF 802
Query: 310 AALVKTGRVVEAD---------------------------------EIAEQMMSNGVEPD 336
L K G EA E +++ S + +
Sbjct: 803 TLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPRE 862
Query: 337 LASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
+YN +IY Y G +D AL+ +++++G D T ++ KA
Sbjct: 863 HFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKA 911
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 186/459 (40%), Gaps = 29/459 (6%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI + ++ +A + D+ I+ GVLP T+ L+D Y + ++ M +
Sbjct: 149 NIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQ 208
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN-------------- 165
PD ++ +++ G F F ++ D+ S +
Sbjct: 209 RMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNL 268
Query: 166 --ILMHCYFRLGMPDEANRVFKDVLLSAETDPS------TATYNVMINGLCKNGYVHNAL 217
L F++G N + K + ++ +D S T+T+N +I+ K G +++A
Sbjct: 269 KQFLSMELFKVGA---RNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAA 325
Query: 218 SMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCC 277
++F + + G + +T+N +I+ +EA LL + E G P+ T+ +++
Sbjct: 326 NLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLH 385
Query: 278 FRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDL 337
G +E LE ++R G D + V+ L + V E + + +M N + D
Sbjct: 386 ADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDE 445
Query: 338 ASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
S ++ +Y +G V +A L ++ + + + +I K +
Sbjct: 446 HSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGK 505
Query: 398 MNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARR 453
N G +++ N ++ GKA ++AL F+GM+ + D TY L L
Sbjct: 506 RNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDL 565
Query: 454 FLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
A + L L G + T A+I + GL ++A
Sbjct: 566 VDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDA 604
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 133/313 (42%), Gaps = 18/313 (5%)
Query: 88 LPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLH 147
+P+V+ +N ++ A R +D M G+ P +Y L+ + GL L
Sbjct: 142 VPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALL 201
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
M + PD + ++ + G D A+R FK + + D + I+
Sbjct: 202 WIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKG-WCAGKVDLDLDS----IDDF 256
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN- 266
KNG + +++ + L F +V N + L A ++ + R +P
Sbjct: 257 PKNGSAQSPVNLKQFLSMELF--KVGARNPIEKSLHFASGSDSSPR----------KPRL 304
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
TF T+++ + GRL + +EM G D + T++ G + EA+ + +
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
+M G+ PD +YN ++ L+ G ++ ALE +I K G D TH ++H LC+ K
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 387 RLNEAVQHLDHMN 399
+ E + M+
Sbjct: 425 MVAEVEAVIAEMD 437
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 102/266 (38%), Gaps = 38/266 (14%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
PDV N+++ + ++E G T DVIS+ ++M G+ + +
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEV 746
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
++M ES + D S+N +M CY G E +F ++L+ + T+ + L
Sbjct: 747 AEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLK 806
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
K G A+S + NEA+ L + AI
Sbjct: 807 KGGVPSEAVSQLQTAY------------------------NEAKPLATP---------AI 833
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
T T G LE E+ S + FAY V+ +G + A + +M
Sbjct: 834 TATLFSA----MGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRM 889
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVD 354
G+EPD+ + ++ +Y + G V+
Sbjct: 890 QEKGLEPDIVTQAYLVGIYGKAGMVE 915
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 185/461 (40%), Gaps = 81/461 (17%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + ++ K D A V D + G++ + TF L+ C+ + E+L+RM+E
Sbjct: 232 NRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE 291
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
PDV +Y +++ V +G +L ++D+M EI+PDV +Y L+ + G +
Sbjct: 292 NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVER 351
Query: 180 ANRVF-----KDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLT 234
+F K +L+ E Y V+I G +G V +A +++ +L G++ ++
Sbjct: 352 GYELFMEMKGKQILIDRE------IYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGI 405
Query: 235 YNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
YNA+I GLC + ++A +L E EP+ T + +M RL +L +
Sbjct: 406 YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIG 465
Query: 295 SKGYTFDGF----------------------------------AYCTVVAALVKTGRVVE 320
GY + Y ++ AL K G + +
Sbjct: 466 ELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQK 525
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQI----------------- 363
+ + +M G EPD +SY+ I + +G V A ++I
Sbjct: 526 SLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTK 585
Query: 364 --------------EKEGPGND-----QYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFG 404
+E GN ++ + + + +CK + ++ +D MN G
Sbjct: 586 GLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVF 645
Query: 405 FNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILV 445
N V ++ G+ K G I A + F ++ R T +V
Sbjct: 646 INEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMV 686
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 147/326 (45%), Gaps = 9/326 (2%)
Query: 82 GVKLGVLPDVVTFNTLIDAYC--RFVSFDAGCEVLERMKEAGLTPDVISYNSL--MSGAV 137
G + G D +N AYC R F A ++ E M G P + L M
Sbjct: 149 GKQKGYKHDFAAYNAF--AYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADN 206
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
R+GL ++++KM + +P V+ YN +M + G D A V++D + ST
Sbjct: 207 RRGL--RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEEST 264
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
T+ +++ GLCK G + L + + ++ P+V Y A+I L + + R+ E
Sbjct: 265 -TFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDE 323
Query: 258 FREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGR 317
R +P+ + + T++ + GR+E+G E+ EM+ K D Y ++ V G+
Sbjct: 324 MRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGK 383
Query: 318 VVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTI 377
V A + E ++ +G D+ YN +I +VD+A +L +E D T +
Sbjct: 384 VRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSP 443
Query: 378 IIHGLCKAKRLNEAVQHLDHMNSLGF 403
I+ RL++ L+ + LG+
Sbjct: 444 IMVAYVVMNRLSDFSNVLERIGELGY 469
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 129/272 (47%), Gaps = 1/272 (0%)
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
D +YN +C R G A+++ +++ S PS + ++I N +
Sbjct: 157 DFAAYNAFAYCLNRNGHFRAADQL-PELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYV 215
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
+ +++ GF P V YN +++ L K + A + +F+E G + TF ++ +
Sbjct: 216 YEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCK 275
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
GR+E+ LEIL MR D FAY ++ LV G + + + ++M + ++PD+ +
Sbjct: 276 AGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMA 335
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
Y T++ + GRV+ EL +++ + D+ + ++I G ++ A + +
Sbjct: 336 YGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLV 395
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFE 431
G+ ++ N V+ GL +D+A K F+
Sbjct: 396 DSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQ 427
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 114/276 (41%), Gaps = 4/276 (1%)
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
+++G+ + YNA L + A +L G P+ F ++ R
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
+ + +M+ G+ F Y ++ ALVK G A + E +G+ + ++ +
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMIL 269
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
+ + GR++E LE++ ++ + D + +T +I L L+ +++ D M
Sbjct: 270 VKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEI 329
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASK 459
+++A ++ GL K G ++R + F M+ + D Y +L+ + A
Sbjct: 330 KPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACN 389
Query: 460 HLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
+ G+ AVI GL S ++A K+
Sbjct: 390 LWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKL 425
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 180/392 (45%), Gaps = 19/392 (4%)
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
L+ +KL PD T+N LI + + + + MK+ GL PD +SY +L+
Sbjct: 355 LMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSI 414
Query: 139 KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA 198
+ + + +M + + D ++ + L Y M +++ FK ++ + S+
Sbjct: 415 RHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG--NMSSE 472
Query: 199 TYNVMINGLCKNGYVHNALSMF---RNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
Y+ I+ + GY+ A +F + + +R V+ YN +I ++ +A L
Sbjct: 473 GYSANIDAYGERGYLSEAERVFICCQEVNKR----TVIEYNVMIKAYGISKSCEKACELF 528
Query: 256 SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT 315
G P+ T+ T++ +G L +MR GY D YC V+++ VK
Sbjct: 529 ESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKL 588
Query: 316 GRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG-PGNDQYT 374
G++ A+E+ ++M+ +EPD+ Y +I + G V +A+ V+ +++ G PGN
Sbjct: 589 GQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGN-SVI 647
Query: 375 HTIIIHGLCKAKRLNEAV----QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
+ +I K L+EA + L N + ++ SNC+++ + + +A F
Sbjct: 648 YNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYP-DVYTSNCMINLYSERSMVRKAEAIF 706
Query: 431 EGMEVR---DSFTYTILVHNLCRARRFLCASK 459
+ M+ R + FT+ +++ + RF A++
Sbjct: 707 DSMKQRGEANEFTFAMMLCMYKKNGRFEEATQ 738
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/450 (19%), Positives = 172/450 (38%), Gaps = 78/450 (17%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR-FVSFDAGCEVLERMK 118
NI + + KA + + + + ++ G+ P T+ TLID Y + + A C L +M
Sbjct: 191 NIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALC-WLGKMS 249
Query: 119 EAGLTPDVI-----------------------------------------SYNSLMSGAV 137
+ G+ PD + +YN+++
Sbjct: 250 KIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYG 309
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
+ G F +M+E I P ++N ++H Y G E + K + L P T
Sbjct: 310 KSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCA--PDT 367
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
TYN++I+ KN + A + F+ ++ G P+ ++Y L+ EA L++E
Sbjct: 368 RTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAE 427
Query: 258 FREAGHEPNAITFTTVMNCCFRCGRLEQG------LEILTEMRSKGYT--FDGFA----- 304
+ E + T + + LE+ + M S+GY+ D +
Sbjct: 428 MDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYL 487
Query: 305 --------------------YCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
Y ++ A + +A E+ E MMS GV PD +YNT++
Sbjct: 488 SEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLV 547
Query: 345 YLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFG 404
+ + ++++ + G +D + +I K +LN A + M
Sbjct: 548 QILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIE 607
Query: 405 FNLVASNCVLDGLGKAGHIDRALKFFEGME 434
++V +++ G++ +A+ + E M+
Sbjct: 608 PDVVVYGVLINAFADTGNVQQAMSYVEAMK 637
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 140/339 (41%), Gaps = 22/339 (6%)
Query: 105 VSFDAGCEVLERMKEAGLTP-DVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWS 163
+ ++ E+ E K G +VI YN ++ + + ++D+MI I+P +
Sbjct: 165 IHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINST 224
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFR-- 221
Y L+ Y + G+ A + + P T +++ K A F+
Sbjct: 225 YGTLIDVYSKGGLKVHA-LCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKW 283
Query: 222 ----NLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCC 277
N TYN +I+ K+ + EA E G P +TF T+++
Sbjct: 284 SCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIY 343
Query: 278 FRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDL 337
G+L + ++ M+ D Y +++ K + A ++M +G++PD
Sbjct: 344 GNNGQLGEVTSLMKTMKLHCAP-DTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDP 402
Query: 338 ASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLD- 396
SY T++Y + + V+EA L+ +++ + D+YT + + +A+ L ++
Sbjct: 403 VSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKR 462
Query: 397 -----HMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
+M+S G+ N +D G+ G++ A + F
Sbjct: 463 FHVAGNMSSEGYSAN-------IDAYGERGYLSEAERVF 494
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 148/322 (45%), Gaps = 3/322 (0%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSF-DA 109
G L+ + I +AK +K ++ P N ++D +
Sbjct: 114 GYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQK 173
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
E+ + + G+ P+ SYN LM + +F KM+E ++ PDV SY IL+
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQ 233
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
+ R G + A + D +L+ P +Y ++N LC+ + A + ++ +G
Sbjct: 234 GFCRKGQVNGAMELLDD-MLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P+++ YN +I G C+ RA +AR++L + G PN++++ T++ G ++G +
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
L EM SKG++ +V G+V EA ++ E +M NG ++ +I L
Sbjct: 353 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 412
Query: 350 QGRVDE-ALELVDQIEKEGPGN 370
+ ++ L L D +++E G+
Sbjct: 413 EDESEKIKLFLEDAVKEEITGD 434
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 144/295 (48%), Gaps = 8/295 (2%)
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKN-GYVHNALS 218
++++Y L+ Y +P++ F +L P N +++ L + GY+ A
Sbjct: 120 EIFTY--LIKVYAEAKLPEKVLSTFYK-MLEFNFTPQPKHLNRILDVLVSHRGYLQKAFE 176
Query: 219 MFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCF 278
+F++ + G +P +YN L+ C + A +L + E P+ ++ ++
Sbjct: 177 LFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFC 236
Query: 279 RCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLA 338
R G++ +E+L +M +KG+ D +Y T++ +L + ++ EA ++ +M G PDL
Sbjct: 237 RKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLV 296
Query: 339 SYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM 398
YNTMI + R+ R +A +++D + G + ++ +I GLC +E ++L+ M
Sbjct: 297 HYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEM 356
Query: 399 NSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM----EVRDSFTYTILVHNLC 449
S GF + SNC++ G G ++ A E + E S T+ +++ +C
Sbjct: 357 ISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 4/216 (1%)
Query: 281 GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASY 340
G L++ E+ R G + +Y ++ A + A ++ +M+ V PD+ SY
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 341 NTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNS 400
+I + R+G+V+ A+EL+D + +G D+ ++T +++ LC+ +L EA + L M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 401 LGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLC 456
G +LV N ++ G + A K + M +S +Y L+ LC F
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 457 ASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
K+L + GF + ++ G S G EA
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 160/393 (40%), Gaps = 45/393 (11%)
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
L+ AY FD +VL + K D+ + N LM+ G M + +F ++ +
Sbjct: 152 LVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLG 211
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
+ + ++Y I++ R G +EA + + + S Y INGLC G A
Sbjct: 212 LCANEYTYAIVVKALCRKGNLEEAAMLLIE-------NESVFGYKTFINGLCVTGETEKA 264
Query: 217 LSMFRNLQRR--------------------------------------GFVPEVLTYNAL 238
+++ L R GF +V A+
Sbjct: 265 VALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAV 324
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I+ CK EA L + G + N + + ++ C + + LE E R
Sbjct: 325 IDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNI 384
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
D Y AL K GRV EA E+ ++M G+ PD+ +Y T+I Y QG+V +AL+
Sbjct: 385 FLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALD 444
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLG 418
L+D++ G D T+ +++ GL + E ++ + M + G N V ++ +++GL
Sbjct: 445 LIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
Query: 419 KAGHIDRALKFFEGMEVRDSFTYTILVHNLCRA 451
A + A FF +E + V C A
Sbjct: 505 FARKVKEAEDFFSSLEQKCPENKASFVKGYCEA 537
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 150/351 (42%), Gaps = 54/351 (15%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYN--------------- 130
G+ PD++T+N L+ R + E+ ERMK G P+ ++ +
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Query: 131 ----------------SLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRL 174
S + G GL F ++ E +R V+ + +F L
Sbjct: 513 EDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRL-EYPLRKSVY-----IKLFFSL 566
Query: 175 ---GMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
G ++A+ V K + + +P + MI CK V A +F + RG +P+
Sbjct: 567 CIEGYLEKAHDVLKK-MSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD 625
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN-----------CCFRC 280
+ TY +I+ C+ +A L + ++ G +P+ +T+T +++ C
Sbjct: 626 LFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQ 685
Query: 281 GRL--EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLA 338
G + + E+L E + G D Y ++ K + +A E+ ++M+ +G+EPD+
Sbjct: 686 GEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMV 745
Query: 339 SYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
+Y T+I YFR+G +D A+ LV ++ K+ + + KAKR
Sbjct: 746 AYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKRFQ 796
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 155/372 (41%), Gaps = 47/372 (12%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
+++ KG ++ +++ + CK +A + + + D V +N DA +
Sbjct: 343 KMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLG 402
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN 165
+ E+L+ MK+ G+ PDVI+Y +L+ G +G L + D+MI + + PD+
Sbjct: 403 RVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLI--- 459
Query: 166 ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR 225
TYNV+++GL +NG+ L ++ ++
Sbjct: 460 ---------------------------------TYNVLVSGLARNGHEEEVLEIYERMKA 486
Query: 226 RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQ 285
G P +T + +I GLC AR+ EA S + E A F G E
Sbjct: 487 EGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKA---------SFVKGYCEA 537
Query: 286 GL--EILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
GL + Y Y + +L G + +A ++ ++M + VEP + M
Sbjct: 538 GLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKM 597
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
I + + V EA L D + + G D +T+TI+IH C+ L +A + M G
Sbjct: 598 IGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI 657
Query: 404 GFNLVASNCVLD 415
++V +LD
Sbjct: 658 KPDVVTYTVLLD 669
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 195/492 (39%), Gaps = 106/492 (21%)
Query: 114 LERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPD------------- 160
L ++KE G++P+V +Y +L+ GL + ++I++E R
Sbjct: 77 LRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVIGEQA 136
Query: 161 ---------VWSYNILMHCYFRLGMPDEANRV-FKDVLLSAETDPSTATYNVMINGLCKN 210
+ L+ Y LGM DEA V F+ L D N ++N + +
Sbjct: 137 EEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKAC--NFLMNRMTEF 194
Query: 211 GYVHNALSMFRNLQ-------------------RRGFVPE----------VLTYNALING 241
G + +++F+ L+ R+G + E V Y ING
Sbjct: 195 GKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFING 254
Query: 242 LCKARRANEARRLLSEFRE----AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
LC +A L+ E + AG + A+ V C +++ ++ EM G
Sbjct: 255 LCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEM-KMKAAESVIIEMEEIG 313
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP---------------------- 335
+ D +A V+ K + EA ++M+ G++
Sbjct: 314 FGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEAL 373
Query: 336 -------------DLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
D YN + GRV+EA EL+ +++ G D +T +I G
Sbjct: 374 EKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGY 433
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DS 438
C ++ +A+ +D M G +L+ N ++ GL + GH + L+ +E M+ ++
Sbjct: 434 CLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNA 493
Query: 439 FTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKK--VR 496
T ++++ LC AR+ + ++ + L+ Q + + + G GL +A K VR
Sbjct: 494 VTNSVIIEGLCFARK-VKEAEDFFSSLE---QKCPENKASFVKGYCEAGLSKKAYKAFVR 549
Query: 497 LK--IRKAQLLR 506
L+ +RK+ ++
Sbjct: 550 LEYPLRKSVYIK 561
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 16/236 (6%)
Query: 65 SMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTP 124
S+C L+KA VL V P +I A+C+ + + + M E GL P
Sbjct: 565 SLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIP 624
Query: 125 DVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD------ 178
D+ +Y ++ R +F+ M + I+PDV +Y +L+ Y +L P+
Sbjct: 625 DLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD-PEHHETCS 683
Query: 179 --------EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVP 230
+A+ V ++ +A Y V+I+ CK + A +F + G P
Sbjct: 684 VQGEVGKRKASEVLRE-FSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEP 742
Query: 231 EVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
+++ Y LI+ + + A L++E + + P+ V + + R + G
Sbjct: 743 DMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKRFQYG 798
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 149/289 (51%), Gaps = 10/289 (3%)
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDP--STATYNVMING 206
F K ES + D +YN LM + G+P +A +++ + +TD +TY ++I
Sbjct: 266 FKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM---EKTDSLLDGSTYELIIPS 322
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
L K+G + A +F+ ++ R P +++L++ + KA R + + ++ E + GH P+
Sbjct: 323 LAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPS 382
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
A F ++++ + G+L+ L + EM+ G+ + Y ++ + K+G++ A + +
Sbjct: 383 ATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG--PGNDQYTHTIIIHGLCK 384
M G P ++Y+ ++ ++ G+VD A+++ + + G PG Y + + L
Sbjct: 443 DMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTL--LAN 500
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
+ ++ A + L M ++G+ ++ AS+ ++ + K +D ALK+ M
Sbjct: 501 KRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI-KDASVDLALKWLRFM 548
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 113/268 (42%), Gaps = 4/268 (1%)
Query: 49 VKGRSLSTKF--LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVS 106
+K R L F + + SM KA +LD + V ++ G P F +LID+Y +
Sbjct: 339 MKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGK 398
Query: 107 FDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNI 166
D + + MK++G P+ Y ++ + G + + +F M ++ P +Y+
Sbjct: 399 LDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSC 458
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
L+ + G D A +++ + + +A P ++Y ++ L V A + ++
Sbjct: 459 LLEMHAGSGQVDSAMKIY-NSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAM 517
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
G+ +V + L+ + K + A + L +G + N + C + G +
Sbjct: 518 GYSVDVCASDVLMIYI-KDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSA 576
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVK 314
+L + D Y +++A LV+
Sbjct: 577 RPLLETLVHSAGKVDLVLYTSILAHLVR 604
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 106/252 (42%), Gaps = 6/252 (2%)
Query: 52 RSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGC 111
R +T F+++ I S KA +LD A + + K G P+ + +I+++ + +
Sbjct: 380 RPSATMFVSL-IDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAM 438
Query: 112 EVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCY 171
V + M++AG P +Y+ L+ G + +++ M + +RP + SY L+
Sbjct: 439 TVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLL 498
Query: 172 FRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
+ D A ++ ++ + A+ +MI K+ V AL R + G
Sbjct: 499 ANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI--YIKDASVDLALKWLRFMGSSGIKTN 556
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRC---GRLEQGLE 288
L K + AR LL + + + + +T+++ RC + Q +
Sbjct: 557 NFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLMS 616
Query: 289 ILTEMRSKGYTF 300
IL+ + K + F
Sbjct: 617 ILSATKHKAHAF 628
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 152/340 (44%), Gaps = 43/340 (12%)
Query: 74 KAECVLIDG-VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM---KEAGLTPDVISY 129
KA C LID +K G TFN LI C +V+E+ K P SY
Sbjct: 169 KAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSY 225
Query: 130 NSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLL 189
N+++ + + + ++++M+E PDV +YNI+M FRLG D R+ +++
Sbjct: 226 NAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMV- 284
Query: 190 SAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRAN 249
+ GF P++ TYN L++ L +
Sbjct: 285 -----------------------------------KDGFSPDLYTYNILLHHLATGNKPL 309
Query: 250 EARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVV 309
A LL+ RE G EP I FTT+++ R G+LE + E G T D Y ++
Sbjct: 310 AALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMI 369
Query: 310 AALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPG 369
+ G + +A+E+ ++M G P++ +YN+MI + G+ EA L+ ++E G
Sbjct: 370 TGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCN 429
Query: 370 NDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
+ ++ +++ L A ++ EA + + M G +L++
Sbjct: 430 PNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLIS 469
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 1/239 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + S+ KQ + V ++ G PDV+T+N ++ A R D +L+ M +
Sbjct: 226 NAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVK 285
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G +PD+ +YN L+ L++ + M E + P V + L+ R G E
Sbjct: 286 DGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-E 344
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + F D + P Y VMI G G + A MF+ + +G +P V TYN++I
Sbjct: 345 ACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMI 404
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
G C A + EA LL E G PN + ++T++N G++ + E++ +M KG+
Sbjct: 405 RGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH 463
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 144/325 (44%), Gaps = 12/325 (3%)
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA-TYNVMINGLCKNGYVHNALSMFRN 222
Y++LM + G R+ +++ + P+TA T+N++I + G + + F
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMI--KDGYPTTACTFNLLICTCGEAGLARDVVEQFIK 212
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
+ + P +YNA+++ L ++ + + E G P+ +T+ VM FR G+
Sbjct: 213 SKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGK 272
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
++ +L EM G++ D + Y ++ L + + A + M GVEP + + T
Sbjct: 273 TDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTT 332
Query: 343 MIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
+I R G+++ +D+ K G D +T++I G L +A + M G
Sbjct: 333 LIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
Query: 403 FGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCAS 458
N+ N ++ G AG A + ME R + Y+ LV+NL A + L A
Sbjct: 393 QLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAH 452
Query: 459 KHLVACLQCGFQV-----LKATRRA 478
+ + ++ G V LK RR+
Sbjct: 453 EVVKDMVEKGHYVHLISKLKKYRRS 477
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 151/330 (45%), Gaps = 27/330 (8%)
Query: 44 TFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
TFRI+VKG + L+KA + D G + D V ++ L+ +
Sbjct: 203 TFRILVKG--------------LVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVK 248
Query: 104 FVSFDAGCEVLERMKE--AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI--ESEIRP 159
D ++ + +KE G D + Y LM G K + + +++ + S++R
Sbjct: 249 NSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRM 308
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDP------STATYNVMINGLCKNGYV 213
+YN ++ G DEA ++F V E +P + T+NVM+NG C G
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAV--KKEHNPPRHLAVNLGTFNVMVNGYCAGGKF 366
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
A+ +FR + P+ L++N L+N LC EA +L E E +P+ T+ +
Sbjct: 367 EEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLL 426
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
M+ CF+ G++++G M + Y + L+K G++ +A + M+S +
Sbjct: 427 MDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-L 485
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQI 363
+ D +Y ++ GR+DE L++VD++
Sbjct: 486 KMDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 162/378 (42%), Gaps = 47/378 (12%)
Query: 124 PDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRV 183
P + + N++++ +R+ + L + + ++ I P++ +YN++ Y + P+ A
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 184 FKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLC 243
+K + +A +PS AT+ +++ GL N + A+ + ++ +GFV + + Y+ L+ G
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 244 KARRANEARRLLSEFRE--AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM--RSKGYT 299
K A+ +L E +E G + + + +M F ++ +E E +
Sbjct: 248 KNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVR 307
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP-----DLASYNTMIYLYFRQGRVD 354
AY V+ AL + G+ EA ++ + + P +L ++N M+ Y G+ +
Sbjct: 308 MSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFE 367
Query: 355 EALE-----------------------------------LVDQIEKEGPGNDQYTHTIII 379
EA+E L ++E++ D+YT+ +++
Sbjct: 368 EAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR--- 436
K +++E + M NL N + D L KAG +D A FF+ M +
Sbjct: 428 DTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKM 487
Query: 437 DSFTYTILVHNLCRARRF 454
D Y ++ L A R
Sbjct: 488 DDEAYKFIMRALSEAGRL 505
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 168/368 (45%), Gaps = 20/368 (5%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERM-KEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
DVV++N++I++Y + E+ RM E G PD I+ +++ G + +
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
+ SE+ +++ N L+ Y + GM DEAN VF ++ + ++N M+ G
Sbjct: 252 HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-----DVVSWNAMVAGYS 306
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
+ G +A+ +F +Q +V+T++A I+G + EA + + +G +PN +
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 269 TFTTVMNCCFRCGRLEQGLEI-------LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
T +V++ C G L G EI ++R G+ + ++ K +V A
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG----PGNDQYTHTI 377
+ + + E D+ ++ MI Y + G ++ALEL+ ++ +E P + +
Sbjct: 427 RAMFDSLSPK--ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 378 IIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRD 437
+ A R+ + + H + + L SNC++D K G I A F+ M ++
Sbjct: 485 VACASLAALRIGKQI-HAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 438 SFTYTILV 445
T+T L+
Sbjct: 544 EVTWTSLM 551
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 192/424 (45%), Gaps = 43/424 (10%)
Query: 49 VKGRSLSTKFLNICIASM-CKAKQLDKAECVLID-GVKLGVLPDVVTFNTLIDAYCRFVS 106
V + F+ C+ M K +D+A V + VK DVV++N ++ Y +
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-----DVVSWNAMVAGYSQIGR 310
Query: 107 FDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPD------ 160
F+ + E+M+E + DV+++++ +SG ++GL L + +M+ S I+P+
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 161 ----VWSYNILMH-----CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
S LMH CY A + D+ + D + N +I+ K
Sbjct: 371 VLSGCASVGALMHGKEIHCY--------AIKYPIDLRKNGHGDENMVI-NQLIDMYAKCK 421
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE--PNAIT 269
V A +MF +L + +V+T+ +I G + AN+A LLSE E + PNA T
Sbjct: 422 KVDTARAMFDSLSPKE--RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 270 FTTVMNCCFRCGRLEQGLEILT-EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
+ + C L G +I +R++ F ++ K G + +A + + M
Sbjct: 480 ISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM 539
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
M+ + ++ +++ Y G +EAL + D++ + G D T ++++ + +
Sbjct: 540 MAK----NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMI 595
Query: 389 NEAVQHLDHMNSLGFGFNLVASN--CVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVH 446
++ +++ + M ++ FG + + C++D LG+AG ++ AL+ E M + +
Sbjct: 596 DQGMEYFNRMKTV-FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFL 654
Query: 447 NLCR 450
+ CR
Sbjct: 655 SCCR 658
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 118/306 (38%), Gaps = 47/306 (15%)
Query: 211 GYVHNALSMFRNLQRRGFVPE---VLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
G + +A+S+ R F P V +N+LI AN+ L P+
Sbjct: 73 GCLSHAVSLLRR-----FPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDN 127
Query: 268 ITFTTVMNCC-----FRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
TF V C RCG L ++T G+ + F +VA + + +A
Sbjct: 128 YTFPFVFKACGEISSVRCGESAHALSLVT-----GFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE-GPGNDQYTHTIII-- 379
++ ++M D+ S+N++I Y + G+ ALE+ ++ E G D T ++
Sbjct: 183 KVFDEMSV----WDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPP 238
Query: 380 ------HGLCKAKR----LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKF 429
H L K +E +Q N+ NC++D K G +D A
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQ------------NMFVGNCLVDMYAKCGMMDEANTV 286
Query: 430 FEGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLK 489
F M V+D ++ +V + RF A + + ++ T A I G GL
Sbjct: 287 FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 490 NEAKKV 495
EA V
Sbjct: 347 YEALGV 352
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/511 (21%), Positives = 218/511 (42%), Gaps = 81/511 (15%)
Query: 33 LTQRITHSKNV-TFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPD- 90
L R+ KNV T+ MV G ++KQL AE + + +P+
Sbjct: 99 LFDRVDSRKNVVTWTAMVSG--------------YLRSKQLSIAEMLFQE------MPER 138
Query: 91 -VVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
VV++NT+ID Y + D E+ + M E +++S+NS++ V++G +++F
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFK------------------------ 185
++M R DV S+ ++ + G DEA R+F
Sbjct: 195 ERM----PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRID 250
Query: 186 --DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLC 243
D L + A++N MI G +N ++ A +F + + V+++ +I G
Sbjct: 251 EADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKN----VISWTTMITGYV 306
Query: 244 KARRANEARRLLSE-FREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
+ + EA + S+ R+ +PN T+ ++++ C L +G +I + + +
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNE 366
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGV--EPDLASYNTMIYLYFRQGRVDEALELV 360
++ K+G ++ A +M NG+ + DL S+N+MI +Y G EA+E+
Sbjct: 367 IVTSALLNMYSKSGELI----AARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMY 422
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHL-DHMNSLGFGFNLVASNCVLDGLGK 419
+Q+ K G T+ ++ A + + ++ D + C++D G+
Sbjct: 423 NQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGR 482
Query: 420 AGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVACL------QCGFQVLK 473
AG + F + R S ++ + + C + +K +V + G VL
Sbjct: 483 AGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLM 542
Query: 474 ATRRAVIDGLISDGLKNEAKKVRLKIRKAQL 504
+ A ++G + EA ++R+K+++ L
Sbjct: 543 SNIYA------ANGKREEAAEMRMKMKEKGL 567
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 127/276 (46%), Gaps = 23/276 (8%)
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC 276
++ R++ P V LI LCK + EAR+L + E + +T+T V+
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLF----DGLPERDVVTWTHVITG 86
Query: 277 CFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPD 336
+ G + + E+ + S+ + +V+ +++ ++ IAE + E +
Sbjct: 87 YIKLGDMREARELFDRVDSRKNVV---TWTAMVSGYLRSKQL----SIAEMLFQEMPERN 139
Query: 337 LASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLD 396
+ S+NTMI Y + GR+D+ALEL D++ P + + ++ L + R++EA+ +
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRGRIDEAMNLFE 195
Query: 397 HMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLC 456
M ++V+ ++DGL K G +D A + F+ M R+ ++ ++ + R
Sbjct: 196 RMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDE 251
Query: 457 ASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
A + + F A+ +I G I + N+A
Sbjct: 252 ADQLFQVMPERDF----ASWNTMITGFIRNREMNKA 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 141/310 (45%), Gaps = 32/310 (10%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
P V LI C+ ++ + + E DV+++ +++G ++ G +
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREAREL 99
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
FD++ + R +V ++ ++ Y R A +F+++ + + ++N MI+G
Sbjct: 100 FDRV---DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEM-----PERNVVSWNTMIDGYA 151
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
++G + AL +F + R V ++N+++ L + R +EA L E + +
Sbjct: 152 QSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLF----ERMPRRDVV 203
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
++T +++ + G++++ + M + ++ ++ + R+ EAD++ + M
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVM 259
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
E D AS+NTMI + R +++A L D++ P + + T +I G + K
Sbjct: 260 ----PERDFASWNTMITGFIRNREMNKACGLFDRM----PEKNVISWTTMITGYVENKEN 311
Query: 389 NEAVQHLDHM 398
EA+ M
Sbjct: 312 EEALNVFSKM 321
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 1/270 (0%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
LN+ ++ C++ +LDK +L D +LG V++NTLI +C + ++ M
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
++GL P+V+++N+L+ G R +F +M + P+ +YN L++ Y + G +
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
A R ++D++ + TYN +I GLCK A + L + VP T++AL
Sbjct: 361 MAFRFYEDMVCNG-IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I G C + A+ L +G PN TF +++ R + ++L EM +
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
D V L G+ ++ ++M
Sbjct: 480 PLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 173/389 (44%), Gaps = 18/389 (4%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
I + ++ K ++ AE +L D V N +D + FDA +L +E
Sbjct: 120 IVLHTLTKNRKFKSAESILRD----------VLVNGGVDLPAKV--FDA---LLYSYREC 164
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
TP V ++SL F F +M + P V S N M G D A
Sbjct: 165 DSTPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIA 222
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
R +++ + + P+ T N++++G C++G + + + ++++R GF ++YN LI
Sbjct: 223 LRFYRE-MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
G C+ + A +L + ++G +PN +TF T+++ R +L++ ++ EM++
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
+ Y T++ + G A E M+ NG++ D+ +YN +I+ +Q + +A + V
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
+++KE + T + +I G C K + + M G N N ++ +
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 421 GHIDRALKFFEGMEVRDSFTYTILVHNLC 449
D A + M R + VH +C
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQVC 490
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 1/244 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N IA C+ L A + K G+ P+VVTFNTLI +CR + +V MK
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
+ P+ ++YN+L++G ++G M ++ M+ + I+ D+ +YN L+ + +
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + K+ L P+++T++ +I G C +++++ R G P T+N L+
Sbjct: 397 AAQFVKE-LDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ C+ + A ++L E ++ T V N G+ + ++L EM K +
Sbjct: 456 SAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Query: 300 FDGF 303
+ F
Sbjct: 516 QESF 519
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
QM G P + S N + QGRVD AL ++ + + YT +++ G C++
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 387 RLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYT 442
+L++ ++ L M LGF V+ N ++ G + G + ALK M + T+
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFN 312
Query: 443 ILVHNLCRARRFLCASK 459
L+H CRA + ASK
Sbjct: 313 TLIHGFCRAMKLQEASK 329
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 1/270 (0%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
LN+ ++ C++ +LDK +L D +LG V++NTLI +C + ++ M
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
++GL P+V+++N+L+ G R +F +M + P+ +YN L++ Y + G +
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
A R ++D++ + TYN +I GLCK A + L + VP T++AL
Sbjct: 361 MAFRFYEDMVCNG-IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I G C + A+ L +G PN TF +++ R + ++L EM +
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
D V L G+ ++ ++M
Sbjct: 480 PLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 173/389 (44%), Gaps = 18/389 (4%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
I + ++ K ++ AE +L D V N +D + FDA +L +E
Sbjct: 120 IVLHTLTKNRKFKSAESILRD----------VLVNGGVDLPAKV--FDA---LLYSYREC 164
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
TP V ++SL F F +M + P V S N M G D A
Sbjct: 165 DSTPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIA 222
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
R +++ + + P+ T N++++G C++G + + + ++++R GF ++YN LI
Sbjct: 223 LRFYRE-MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
G C+ + A +L + ++G +PN +TF T+++ R +L++ ++ EM++
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
+ Y T++ + G A E M+ NG++ D+ +YN +I+ +Q + +A + V
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
+++KE + T + +I G C K + + M G N N ++ +
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 421 GHIDRALKFFEGMEVRDSFTYTILVHNLC 449
D A + M R + VH +C
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQVC 490
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 1/244 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N IA C+ L A + K G+ P+VVTFNTLI +CR + +V MK
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
+ P+ ++YN+L++G ++G M ++ M+ + I+ D+ +YN L+ + +
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + K+ L P+++T++ +I G C +++++ R G P T+N L+
Sbjct: 397 AAQFVKE-LDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ C+ + A ++L E ++ T V N G+ + ++L EM K +
Sbjct: 456 SAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Query: 300 FDGF 303
+ F
Sbjct: 516 QESF 519
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
QM G P + S N + QGRVD AL ++ + + YT +++ G C++
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 387 RLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYT 442
+L++ ++ L M LGF V+ N ++ G + G + ALK M + T+
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFN 312
Query: 443 ILVHNLCRARRFLCASK 459
L+H CRA + ASK
Sbjct: 313 TLIHGFCRAMKLQEASK 329
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 158/360 (43%), Gaps = 35/360 (9%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
++ +D + +D E +ERM+ L + + +M G + + +FD++
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVT-LNTVAKIMRRFAGAGEWEEAVGIFDRLG 182
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
E + + S N+L+ + ++A V + L + P+ T+N+ I+G CK V
Sbjct: 183 EFGLEKNTESMNLLLDTLCKEKRVEQARVVL--LQLKSHITPNAHTFNIFIHGWCKANRV 240
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
AL + ++ GF P V++Y +I C+ + +LSE G PN+IT+TT+
Sbjct: 241 EEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTI 300
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE-QMMSNG 332
M+ E+ L + T M+ G D Y ++ L + GR+ EA+ + +M G
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELG 360
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN-DQYTHTIIIHGLCKAKRLNEA 391
V + ++YN+MI +Y D+A+EL+ ++E N D +T+ ++ K + E
Sbjct: 361 VSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEV 420
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRA 451
+ L M + H+ D TYT L+ LCRA
Sbjct: 421 GKLLKEMVT-------------------KHHLS-----------LDESTYTFLIQRLCRA 450
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 3/273 (1%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
NI I CKA ++++A + + G P V+++ T+I YC+ F E+L M+
Sbjct: 227 FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEME 286
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
G P+ I+Y ++MS + F L + +M S +PD YN L+H R G +
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV-PEVLTYNA 237
EA RVF+ + +T+TYN MI C + A+ + + ++ P+V TY
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 238 LINGLCKARRANEARRLLSEFREAGH-EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
L+ K E +LL E H + T+T ++ R E + EM S+
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
T C ++ VK + E+ E E +M
Sbjct: 467 DIT-PRHRTCLLLLEEVKKKNMHESAERIEHIM 498
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 134/288 (46%), Gaps = 5/288 (1%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAG 110
G +T+ +N+ + ++CK K++++A VL+ +K + P+ TFN I +C+ +
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 111 CEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHC 170
++ MK G P VISY +++ ++ F M +M + P+ +Y +M
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 171 YFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFR-NLQRRGFV 229
+EA RV + S P + YN +I+ L + G + A +FR + G
Sbjct: 304 LNAQKEFEEALRVATRMKRSG-CKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGH-EPNAITFTTVMNCCFRCGRLEQGLE 288
TYN++I C ++A LL E + P+ T+ ++ CF+ G + + +
Sbjct: 363 INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGK 422
Query: 289 ILTEMRSKGY-TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
+L EM +K + + D Y ++ L + A + E+M+S + P
Sbjct: 423 LLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 158/360 (43%), Gaps = 35/360 (9%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
++ +D + +D E +ERM+ L + + +M G + + +FD++
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVT-LNTVAKIMRRFAGAGEWEEAVGIFDRLG 182
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
E + + S N+L+ + ++A V + L + P+ T+N+ I+G CK V
Sbjct: 183 EFGLEKNTESMNLLLDTLCKEKRVEQARVVL--LQLKSHITPNAHTFNIFIHGWCKANRV 240
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
AL + ++ GF P V++Y +I C+ + +LSE G PN+IT+TT+
Sbjct: 241 EEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTI 300
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE-QMMSNG 332
M+ E+ L + T M+ G D Y ++ L + GR+ EA+ + +M G
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELG 360
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN-DQYTHTIIIHGLCKAKRLNEA 391
V + ++YN+MI +Y D+A+EL+ ++E N D +T+ ++ K + E
Sbjct: 361 VSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEV 420
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRA 451
+ L M + H+ D TYT L+ LCRA
Sbjct: 421 GKLLKEMVT-------------------KHHLS-----------LDESTYTFLIQRLCRA 450
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 3/273 (1%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
NI I CKA ++++A + + G P V+++ T+I YC+ F E+L M+
Sbjct: 227 FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEME 286
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
G P+ I+Y ++MS + F L + +M S +PD YN L+H R G +
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV-PEVLTYNA 237
EA RVF+ + +T+TYN MI C + A+ + + ++ P+V TY
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 238 LINGLCKARRANEARRLLSEFREAGH-EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
L+ K E +LL E H + T+T ++ R E + EM S+
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
T C ++ VK + E+ E E +M
Sbjct: 467 DIT-PRHRTCLLLLEEVKKKNMHESAERIEHIM 498
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 134/288 (46%), Gaps = 5/288 (1%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAG 110
G +T+ +N+ + ++CK K++++A VL+ +K + P+ TFN I +C+ +
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 111 CEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHC 170
++ MK G P VISY +++ ++ F M +M + P+ +Y +M
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 171 YFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFR-NLQRRGFV 229
+EA RV + S P + YN +I+ L + G + A +FR + G
Sbjct: 304 LNAQKEFEEALRVATRMKRSG-CKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGH-EPNAITFTTVMNCCFRCGRLEQGLE 288
TYN++I C ++A LL E + P+ T+ ++ CF+ G + + +
Sbjct: 363 INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGK 422
Query: 289 ILTEMRSKGY-TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
+L EM +K + + D Y ++ L + A + E+M+S + P
Sbjct: 423 LLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 142/338 (42%), Gaps = 35/338 (10%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N ++ +A+ LD + ++ + K G D+ T+ LI Y + G V E+M++
Sbjct: 193 NTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRK 252
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
+G D +YN ++ G + L + +M+E I + +Y +L+ C + D
Sbjct: 253 SGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDV 312
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
+ D++ E A + ++ C +G + AL + R L+ + + + L+
Sbjct: 313 VQSIADDMVRICEISEHDA-FGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
Query: 240 NGLCKAR-------------------------------RANEARRLLSEF---REAGHEP 265
GLC+A R N+ + L +F +++G P
Sbjct: 372 KGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPP 431
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
T+T +M F+ + E+G + EM G D A VVA + RV EA ++
Sbjct: 432 RVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVF 491
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQI 363
M G++P SY+ + R R DE +++ +Q+
Sbjct: 492 SSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 154/338 (45%), Gaps = 6/338 (1%)
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
G + V YN+++S A M + +M ++ D+ ++ IL+ Y + +
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKG 243
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
VF+ + S +TA YN+MI LC G AL ++ + +G + TY L++
Sbjct: 244 LLVFEKMRKSGFELDATA-YNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLD 302
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
+ K+ + + + + + F ++ G++++ LE++ E+++K
Sbjct: 303 CIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCL 362
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
D + +V L + R+V+A EI + M ++ D Y +I Y RQ V +ALE
Sbjct: 363 DAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQF 421
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
+ I+K G T+T I+ L K K+ + + M G + VA V+ G
Sbjct: 422 EVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQ 481
Query: 421 GHIDRALKFFEGME---VRDSF-TYTILVHNLCRARRF 454
+ A K F ME ++ ++ +Y+I V LCR+ R+
Sbjct: 482 NRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRY 519
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 6/279 (2%)
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC--KNGYVH 214
I D W+ I++ Y R G+ + A R FK+ + PS++T+ +I LC K V
Sbjct: 711 ITQDTWA--IMIMQYGRTGLTNIAIRTFKE-MKDMGLIPSSSTFKCLITVLCEKKGRNVE 767
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
A FR + R GFVP+ + LC+ +A+ L + G P + ++ +
Sbjct: 768 EATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYI 826
Query: 275 NCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
R G+LE+ L L + D + Y ++V L++ G + +A + M G +
Sbjct: 827 RALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTK 886
Query: 335 PDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQH 394
P + Y ++I +F++ ++++ LE ++E E T+T +I G ++ EA
Sbjct: 887 PGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNA 946
Query: 395 LDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
+M G + + ++ L +A + ALK M
Sbjct: 947 FRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEM 985
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 7/242 (2%)
Query: 44 TFRIMVK-GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYC 102
TFR M++ G + + + +C+ A+ L K+G P V ++ I A C
Sbjct: 772 TFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAYSIYIRALC 830
Query: 103 RFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVW 162
R + L + D +Y S++ G +++G L + M E +P V
Sbjct: 831 RIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVH 890
Query: 163 SYNILMHCYFRLGMPDEANRVFK--DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMF 220
Y L+ +F+ + +V + + +PS TY MI G G V A + F
Sbjct: 891 VYTSLIVYFFK---EKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAF 947
Query: 221 RNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRC 280
RN++ RG P+ TY+ IN LC+A ++ +A +LLSE + G P+ I F TV R
Sbjct: 948 RNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNRE 1007
Query: 281 GR 282
G+
Sbjct: 1008 GK 1009
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 43/323 (13%)
Query: 214 HNALSMFRNL-QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
H A+ F + Q+ GF V YN +++ +AR + L+SE + G + + T+T
Sbjct: 170 HLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTI 229
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
+++ + ++ +GL + +MR G+ D AY ++ +L GR A E ++MM G
Sbjct: 230 LISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKG 289
Query: 333 VEPDLASYNTMI--------------------------------YL---YFRQGRVDEAL 357
+ L +Y ++ YL + G++ EAL
Sbjct: 290 ITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEAL 349
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
EL+ +++ + D I++ GLC+A R+ +A++ +D M + V ++ G
Sbjct: 350 ELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVY-GIIISGY 408
Query: 418 GKAGHIDRALKFFE-----GMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVL 472
+ + +AL+ FE G R S TYT ++ +L + ++F ++ G +
Sbjct: 409 LRQNDVSKALEQFEVIKKSGRPPRVS-TYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPD 467
Query: 473 KATRRAVIDGLISDGLKNEAKKV 495
AV+ G + EA KV
Sbjct: 468 SVAITAVVAGHLGQNRVAEAWKV 490
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 136/340 (40%), Gaps = 36/340 (10%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
I I+ KAK++ K V K G D +N +I + C D E + M E
Sbjct: 228 TILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMME 287
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE-SEIRP-DVWSYNILMHC------- 170
G+T + +Y L+ + + + D M+ EI D + Y + C
Sbjct: 288 KGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKE 347
Query: 171 ------------------YFRLGMPD--EANRVFK-----DVLLSAETDPSTATYNVMIN 205
YF + + ANR+ D++ + D S Y ++I+
Sbjct: 348 ALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIIS 406
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
G + V AL F +++ G P V TY ++ L K ++ + L +E E G EP
Sbjct: 407 GYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEP 466
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
+++ T V+ R+ + ++ + M KG +Y V L ++ R E +I
Sbjct: 467 DSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIF 526
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEK 365
QM ++ + ++ +I + G E + L+ +I+K
Sbjct: 527 NQMHASKIVIRDDIFSWVISSMEKNGE-KEKIHLIKEIQK 565
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 139/354 (39%), Gaps = 62/354 (17%)
Query: 209 KNGYVHNA-------------------LSMFRNLQRRGFVPEVLTYNALINGLCKARRAN 249
+NGY HN+ S+F ++R+G + T+ +I + N
Sbjct: 671 RNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTN 730
Query: 250 EARRLLSEFREAGHEPNAITFTTVMNC-CFRCGR-LEQGLEILTEMRSKGYTFDGFAYCT 307
A R E ++ G P++ TF ++ C + GR +E+ EM G+ D
Sbjct: 731 IAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQD 790
Query: 308 VVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
+ L + G +A + + G P +Y+ I R G+++EAL + E E
Sbjct: 791 YLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGER 849
Query: 368 PGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG-------------FGF--------- 405
DQYT+ I+HGL + L +A+ ++ M +G + F
Sbjct: 850 SLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVL 909
Query: 406 -------------NLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNL 448
++V ++ G G ++ A F ME R D TY+ ++ L
Sbjct: 910 ETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCL 969
Query: 449 CRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKA 502
C+A + A K L L G R V GL +G K++ ++ L+ + A
Sbjct: 970 CQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREG-KHDLARIALQKKSA 1022
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 1/193 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
+I I ++C+ +L++A L L D T+ +++ + + + MKE
Sbjct: 823 SIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKE 882
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G P V Y SL+ ++ L KM P V +Y ++ Y LG +E
Sbjct: 883 IGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEE 942
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A F++ + T P TY+ IN LC+ +AL + + +G P + + +
Sbjct: 943 AWNAFRN-MEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVF 1001
Query: 240 NGLCKARRANEAR 252
GL + + + AR
Sbjct: 1002 YGLNREGKHDLAR 1014
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 160/379 (42%), Gaps = 47/379 (12%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
+++ P++ FN L+DA C+ G +L RM+ + PD ++N L G R
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDP 284
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLL--SAETDPSTATY 200
+ + ++MIE+ +P+ ++Y + + + GM DEA +F ++ SA + P+ T+
Sbjct: 285 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 201 NVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
+MI L KN + + G +P+V TY +I G+C A + +EA + L
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLD---- 400
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVE 320
EM +KGY D Y + L + + E
Sbjct: 401 -------------------------------EMSNKGYPPDIVTYNCFLRVLCENRKTDE 429
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIH 380
A ++ +M+ + P + +YN +I ++F D A +++K D T+ +I+
Sbjct: 430 ALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMIN 489
Query: 381 GLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFT 440
GL R EA L+ + + G + L L + G++ K E M+
Sbjct: 490 GLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKK----- 544
Query: 441 YTILVHNLCRARRFLCASK 459
+N ARRF + K
Sbjct: 545 ----FYNHSMARRFALSEK 559
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 10/294 (3%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
RI VK + F N+ + ++CK + + E L+ ++ V PD TFN L +CR
Sbjct: 225 RIRVKTQPEINAF-NMLLDALCKCGLVKEGE-ALLRRMRHRVKPDANTFNVLFFGWCRVR 282
Query: 106 SFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI---ESEIRPDVW 162
++LE M EAG P+ +Y + + + G+ +FD MI + P
Sbjct: 283 DPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAK 342
Query: 163 SYNILMHCYFRLGMPDEANRVFKDV--LLSAETDPSTATYNVMINGLCKNGYVHNALSMF 220
++ +++ L D+A F+ + ++S P +TY +I G+C V A
Sbjct: 343 TFALMI---VALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFL 399
Query: 221 RNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRC 280
+ +G+ P+++TYN + LC+ R+ +EA +L E+ P+ T+ +++ F
Sbjct: 400 DEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEM 459
Query: 281 GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
+ TEM + D YC ++ L R EA + E++++ G++
Sbjct: 460 DDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLK 513
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 128/301 (42%), Gaps = 40/301 (13%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAG 110
G + + N+ I S +A +A + P ++N ++++ +
Sbjct: 179 GFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLI 238
Query: 111 CEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHC 170
V ++M E G +PDV++YN L+ R G +FD+M PD ++YNIL+H
Sbjct: 239 EWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHI 298
Query: 171 YFRLGMP----------------------------------DEANRVFKDVLLSAETDPS 196
+ P EA + F D ++ A P
Sbjct: 299 LGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPD 358
Query: 197 TATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
Y VMI G +G + A MFR + +G +P V TYN++I GLC A EA LL
Sbjct: 359 VVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLK 418
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
E G PN + ++T+++ + G+L + +++ EM KG+ Y +V ++K
Sbjct: 419 EMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGH------YVHLVPKMMKYR 472
Query: 317 R 317
R
Sbjct: 473 R 473
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 8/250 (3%)
Query: 16 PFTHP--AILNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLD 73
PF H AILN + + + + ++ G S NI + + + ++D
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQ-----MLEDGFSPDVLTYNILLWTNYRLGKMD 271
Query: 74 KAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLM 133
+ + + + + G PD T+N L+ + A L MKE G+ P V+ Y +L+
Sbjct: 272 RFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLI 331
Query: 134 SGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAET 193
G R G + D+M+++ RPDV Y +++ Y G D+A +F+++ + +
Sbjct: 332 DGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL 391
Query: 194 DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARR 253
P+ TYN MI GLC G A + + ++ RG P + Y+ L++ L KA + +EAR+
Sbjct: 392 -PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 254 LLSEFREAGH 263
++ E + GH
Sbjct: 451 VIREMVKKGH 460
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 143/331 (43%), Gaps = 9/331 (2%)
Query: 126 VISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFK 185
V SY+ LM G + + D+M++ ++N+L+ G+ +A F
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQF- 207
Query: 186 DVLLSAET---DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+ ++T P +YN ++N L +++ + GF P+VLTYN L+
Sbjct: 208 ---MKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTN 264
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
+ + + RL E G P++ T+ +++ + + L L M+ G
Sbjct: 265 YRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSV 324
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
Y T++ L + G + ++M+ G PD+ Y MI Y G +D+A E+ +
Sbjct: 325 LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFRE 384
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
+ +G + +T+ +I GLC A EA L M S G N V + ++ L KAG
Sbjct: 385 MTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGK 444
Query: 423 IDRALKFFEGMEVRDSFTYTILVHNLCRARR 453
+ A K M + + + LV + + RR
Sbjct: 445 LSEARKVIREMVKKGHYVH--LVPKMMKYRR 473
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 144/318 (45%), Gaps = 1/318 (0%)
Query: 91 VVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFD 150
V +++ L+ + + A +++ M + G ++N L+ GL + F
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFM 208
Query: 151 KMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKN 210
K RP SYN +++ + V+K +L + P TYN+++ +
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFS-PDVLTYNILLWTNYRL 267
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
G + +F + R GF P+ TYN L++ L K + A L+ +E G +P+ + +
Sbjct: 268 GKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHY 327
Query: 271 TTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS 330
TT+++ R G LE L EM G D Y ++ V +G + +A E+ +M
Sbjct: 328 TTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTV 387
Query: 331 NGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
G P++ +YN+MI G EA L+ ++E G + ++ ++ L KA +L+E
Sbjct: 388 KGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSE 447
Query: 391 AVQHLDHMNSLGFGFNLV 408
A + + M G +LV
Sbjct: 448 ARKVIREMVKKGHYVHLV 465
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 43/268 (16%)
Query: 228 FVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGL 287
F V +Y+ L+ + RL+ E + G A TF ++ C G +Q
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQA- 203
Query: 288 EILTEMRSKGYTFDGF--AYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIY 345
++ M+SK + + F +Y ++ +L+ + + + +QM+ +G PD+ +YN +++
Sbjct: 204 -VVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLW 262
Query: 346 LYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGF 405
+R G++D L D++ ++G D YT+ I++H L K + A+ L+HM +G
Sbjct: 263 TNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDP 322
Query: 406 NLVASNCVLDGLGKAGHI-----------------------------------DRALKFF 430
+++ ++DGL +AG++ D+A + F
Sbjct: 323 SVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMF 382
Query: 431 EGMEVR----DSFTYTILVHNLCRARRF 454
M V+ + FTY ++ LC A F
Sbjct: 383 REMTVKGQLPNVFTYNSMIRGLCMAGEF 410
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 158/353 (44%), Gaps = 19/353 (5%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D VT TL+ A R + G EV D++ +++M + G +F
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
D +E D+ +N L+ Y G+ EA R+F + L P+ T+N++I L +
Sbjct: 434 DSTVEK----DLILWNTLLAAYAESGLSGEALRLFYGMQLEG-VPPNVITWNLIILSLLR 488
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
NG V A MF +Q G +P ++++ ++NG+ + + EA L + +E+G PNA +
Sbjct: 489 NGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFS 548
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRV---VEADEI-- 324
T ++ C L G I GY + ++V+ ++T V + +I
Sbjct: 549 ITVALSACAHLASLHIGRTI------HGYIIRNLQHSSLVS--IETSLVDMYAKCGDINK 600
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
AE++ + + +L N MI Y G + EA+ L +E G D T T ++
Sbjct: 601 AEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNH 660
Query: 385 AKRLNEAVQ-HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR 436
A +N+A++ D ++ L ++D L AG ++AL+ E M +
Sbjct: 661 AGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFK 713
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 156/355 (43%), Gaps = 19/355 (5%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPD--VISYNSLMSGAVRKG 140
VK G+ V ++L D Y + D +V + + PD +++N+LM G V+ G
Sbjct: 200 VKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEI------PDRNAVAWNALMVGYVQNG 253
Query: 141 LFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSA-ETDPSTAT 199
+ +F M + + P + + + +G +E + +++ E D T
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 200 YNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR 259
++N CK G + A +F R F +V+T+N +I+G + +A + R
Sbjct: 314 S--LLNFYCKVGLIEYAEMVFD----RMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMR 367
Query: 260 EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVV 319
+ + +T T+M+ R L+ G E+ + D TV+ K G +V
Sbjct: 368 LEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIV 427
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIII 379
+A ++ + VE DL +NT++ Y G EAL L ++ EG + T +II
Sbjct: 428 DAKKV----FDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII 483
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
L + +++EA M S G NL++ +++G+ + G + A+ F M+
Sbjct: 484 LSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQ 538
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 143/330 (43%), Gaps = 16/330 (4%)
Query: 79 LIDGVKL-GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAV 137
L G++L GV P+V+T+N +I + R D ++ +M+ +G+ P++IS+ ++M+G V
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMV 522
Query: 138 RKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPST 197
+ G + KM ES +RP+ +S + + L + ++ + +
Sbjct: 523 QNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLV 582
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
+ +++ K G ++ A +F + E+ NA+I+ EA L
Sbjct: 583 SIETSLVDMYAKCGDINKAEKVFGS----KLYSELPLSNAMISAYALYGNLKEAIALYRS 638
Query: 258 FREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFA-YCTVVAALVKTG 316
G +P+ IT T V++ C G + Q +EI T++ SK Y +V L G
Sbjct: 639 LEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAG 698
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEK---EGPGNDQY 373
+A + E+M +PD +++ +Q + ELVD + + E +
Sbjct: 699 ETEKALRLIEEM---PFKPDARMIQSLVASCNKQRKT----ELVDYLSRKLLESEPENSG 751
Query: 374 THTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
+ I + +E V+ + M + G
Sbjct: 752 NYVTISNAYAVEGSWDEVVKMREMMKAKGL 781
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 173/412 (41%), Gaps = 24/412 (5%)
Query: 103 RFVSFDAGCEVLERMKEAGLTP----DVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIR 158
+ V F A C+ LE + E + +V S+ +++ R GL L F +M+E+EI
Sbjct: 112 KLVIFYAKCDALE-IAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIF 170
Query: 159 PDVWSY-NILMHC----YFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
PD + N+ C + R G R ++ + + + + + K G +
Sbjct: 171 PDNFVVPNVCKACGALKWSRFG------RGVHGYVVKSGLEDCVFVASSLADMYGKCGVL 224
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
+A +F + R V +NAL+ G + + EA RL S+ R+ G EP +T +T
Sbjct: 225 DDASKVFDEIPDRNAV----AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTC 280
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
++ G +E+G + G D +++ K G + E AE +
Sbjct: 281 LSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI----EYAEMVFDRMF 336
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
E D+ ++N +I Y +QG V++A+ + + E D T ++ + + L +
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 394 HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARR 453
+ F ++V ++ V+D K G I A K F+ +D + L+ +
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGL 456
Query: 454 FLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQLL 505
A + G T +I L+ +G +EAK + L+++ + ++
Sbjct: 457 SGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGII 508
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 143/311 (45%), Gaps = 13/311 (4%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N+ I S+ + Q+D+A+ + + G++P+++++ T+++ + + L +M+E
Sbjct: 480 NLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQE 539
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNI-LMHCYFRLGMPD 178
+GL P+ S +S + + +I + + S L+ Y + G +
Sbjct: 540 SGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDIN 599
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+A +VF L S N MI+ G + A++++R+L+ G P+ +T +
Sbjct: 600 KAEKVFGSKLYS-----ELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNV 654
Query: 239 INGLCKARRANEARRLLSEF-REAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
++ A N+A + ++ + +P + +++ G E+ L ++ EM K
Sbjct: 655 LSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKP 714
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPD-LASYNTMIYLYFRQGRVDEA 356
D ++VA+ K + D ++ +++ + EP+ +Y T+ Y +G DE
Sbjct: 715 ---DARMIQSLVASCNKQRKTELVDYLSRKLLES--EPENSGNYVTISNAYAVEGSWDEV 769
Query: 357 LELVDQIEKEG 367
+++ + ++ +G
Sbjct: 770 VKMREMMKAKG 780
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 5/260 (1%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCE-VLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
D +FN +++ +C + E V M G+ DV+SY+S++S + G L +
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 324
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
FD+M + I PD YN ++H + EA + K + +P+ TYN +I LC
Sbjct: 325 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 384
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
K A +F + +G P + TY+A + L R E LL++ R+ G EP
Sbjct: 385 KARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGCEPTVE 441
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
T+ ++ R + L + EM+ K D +Y ++ L G++ EA ++M
Sbjct: 442 TYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 501
Query: 329 MSNGVEPDLASYNTMIYLYF 348
G+ P+ + MI +F
Sbjct: 502 KDKGMRPN-ENVEDMIQSWF 520
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 9/277 (3%)
Query: 94 FNTLIDAYCRFVSF-DAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLH-MFDK 151
F +L+ A CR+ + DAG + + D S+N +++G P ++ +
Sbjct: 235 FQSLLSALCRYKNVSDAGHLIF--CNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWME 292
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
M ++ DV SY+ ++ CY + G ++ ++F D + +P YN +++ L K
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLF-DRMKKECIEPDRKVYNAVVHALAKAS 351
Query: 212 YVHNALSMFRNLQR-RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
+V A ++ + ++ +G P V+TYN+LI LCKAR+ EA+++ E E G P T+
Sbjct: 352 FVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY 411
Query: 271 TTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS 330
M R G E+ E+L +MR G Y ++ L + + ++M
Sbjct: 412 HAFMRI-LRTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKE 468
Query: 331 NGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
V PDL+SY MI+ F G+++EA +++ +G
Sbjct: 469 KTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKG 505
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 159/378 (42%), Gaps = 49/378 (12%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTL---IDAYCRFVSFDAGCEVLERMKE 119
I+ + K ++ D A LID ++ P +V TL I YC K
Sbjct: 168 ISILGKMRKFDTA-WTLIDEMR-KFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKR 225
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRP-DVWSYNILMHCYFR-LGMP 177
L + + SL+S R H+ + P D S+NI+++ + +G P
Sbjct: 226 FKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFNIVLNGWCNVIGSP 283
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
EA RV+ + + + +Y+ MI+ K G ++ L +F +++ P+ YNA
Sbjct: 284 REAERVWME-MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNA 342
Query: 238 LINGLCKARRANEARRLLSEFRE-AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
+++ L KA +EAR L+ E G EPN +T
Sbjct: 343 VVHALAKASFVSEARNLMKTMEEEKGIEPNVVT--------------------------- 375
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA 356
Y +++ L K + EA ++ ++M+ G+ P + +Y+ + + R G +E
Sbjct: 376 --------YNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRI-LRTG--EEV 424
Query: 357 LELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDG 416
EL+ ++ K G T+ ++I LC+ + + + D M G +L + ++ G
Sbjct: 425 FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHG 484
Query: 417 LGKAGHIDRALKFFEGME 434
L G I+ A +++ M+
Sbjct: 485 LFLNGKIEEAYGYYKEMK 502
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 6/246 (2%)
Query: 54 LSTKFLNICIASMCKA-KQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCE 112
K NI + C +AE V ++ +GV DVV+++++I Y + S + +
Sbjct: 264 FDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 323
Query: 113 VLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE-IRPDVWSYNILMHCY 171
+ +RMK+ + PD YN+++ + ++ M E + I P+V +YN L+
Sbjct: 324 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPL 383
Query: 172 FRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
+ +EA +VF D +L P+ TY+ + L V L+ R + G P
Sbjct: 384 CKARKTEEAKQVF-DEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKM---GCEPT 439
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILT 291
V TY LI LC+ R + L E +E P+ ++ +++ F G++E+
Sbjct: 440 VETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYK 499
Query: 292 EMRSKG 297
EM+ KG
Sbjct: 500 EMKDKG 505
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 6/263 (2%)
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
++ T +MI C V A++ F +R + + +L++ LC+ + ++A L+
Sbjct: 196 NSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI 255
Query: 256 SEFREAGHEP-NAITFTTVMN-CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
F P +A +F V+N C G + + EM + G D +Y ++++
Sbjct: 256 --FCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYS 313
Query: 314 KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE-GPGNDQ 372
K G + + ++ ++M +EPD YN +++ + V EA L+ +E+E G +
Sbjct: 314 KGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNV 373
Query: 373 YTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEG 432
T+ +I LCKA++ EA Q D M G + + + L + L
Sbjct: 374 VTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRK 433
Query: 433 MEVRDSF-TYTILVHNLCRARRF 454
M + TY +L+ LCR R F
Sbjct: 434 MGCEPTVETYIMLIRKLCRWRDF 456
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 118/269 (43%), Gaps = 41/269 (15%)
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM----NCC-- 277
+++G+V V Y+++I+ L K R+ + A L+ E R+ P+ + T++ C
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAV 210
Query: 278 ------------FRCGRLEQGLEILTEMRS-------------------KGYTFDGFAYC 306
++ +LE G++ + S Y FD ++
Sbjct: 211 HDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFN 270
Query: 307 TVVAALVKT-GRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEK 365
V+ G EA+ + +M + GV+ D+ SY++MI Y + G +++ L+L D+++K
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 366 EGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM-NSLGFGFNLVASNCVLDGLGKAGHID 424
E D+ + ++H L KA ++EA + M G N+V N ++ L KA +
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 425 RALKFFEGMEVRDSFTYTILVHNLCRARR 453
A + F+ M + F H R R
Sbjct: 391 EAKQVFDEMLEKGLFPTIRTYHAFMRILR 419
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G+ P+VVT+N+LI C+ + +V + M E GL P + +Y++ M +R G
Sbjct: 368 GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRTG--EEV 424
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLL------SAETDPSTAT 199
+ KM + P V +Y +L+ R R F +VLL P ++
Sbjct: 425 FELLAKMRKMGCEPTVETYIMLIRKLCRW-------RDFDNVLLLWDEMKEKTVGPDLSS 477
Query: 200 YNVMINGLCKNGYVHNALSMFRNLQRRGFVP 230
Y VMI+GL NG + A ++ ++ +G P
Sbjct: 478 YIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 508
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 149/349 (42%), Gaps = 14/349 (4%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVS----FDAGCEVL 114
LNI ++ K + A+ L G P+ TL++ Y + +S + EV
Sbjct: 116 LNILFGALLDGKAVKAAKSFLDT---TGFKPE----PTLLEQYVKCLSEEGLVEEAIEVY 168
Query: 115 ERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRL 174
+K+ G++ V++ NS++ G ++ + +M+ESE D L+
Sbjct: 169 NVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF--DSERIRCLIRALCDG 226
Query: 175 GMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLT 234
G E + K L DP Y +I+G C+ G + + P +
Sbjct: 227 GDVSEGYELLKQGLKQG-LDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYI 285
Query: 235 YNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
Y +I GLC ++ EA + ++ G+ P+ + +TT++ G L ++ EM
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMI 345
Query: 295 SKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
KG + FAY ++ K G + + +M+ NG + S NTMI + G+ D
Sbjct: 346 KKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSD 405
Query: 355 EALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
EA E+ + + G + T+ +I G CK ++ + ++ + +LG
Sbjct: 406 EAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGL 454
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 1/250 (0%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I ++C + + +L G+K G+ P + LI +C ++ EVL M
Sbjct: 220 IRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNH 279
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P + Y ++ G +F + + PD Y ++ + G A +
Sbjct: 280 FPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARK 339
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
++ + ++ P+ YNVMI+G K G + + + + R G+ +L+ N +I G
Sbjct: 340 LWFE-MIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGF 398
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
C +++EA + E G PNAIT+ ++ + ++E+GL++ E+++ G G
Sbjct: 399 CSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSG 458
Query: 303 FAYCTVVAAL 312
AY +V L
Sbjct: 459 MAYAALVRNL 468
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 63/133 (47%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT 96
+ ++ + F ++ KG + N+ I K ++ E + ++ G +++ NT
Sbjct: 334 LGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNT 393
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
+I +C D E+ + M E G+TP+ I+YN+L+ G ++ L ++ ++
Sbjct: 394 MIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALG 453
Query: 157 IRPDVWSYNILMH 169
++P +Y L+
Sbjct: 454 LKPSGMAYAALVR 466
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/463 (20%), Positives = 188/463 (40%), Gaps = 36/463 (7%)
Query: 39 HSKNVTFRIMVK-GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTL 97
H F+ + + G S +A+M KQ ++ + + G D + FN +
Sbjct: 62 HEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAV 121
Query: 98 IDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES-- 155
I+A+ + + + L +MKE GL P +YN+L+ G G + + D M+E
Sbjct: 122 INAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGN 181
Query: 156 -EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVH 214
++ P++ ++N+L+ + + +EA V K + P T TYN + + G
Sbjct: 182 VDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKK-MEECGVRPDTVTYNTIATCYVQKGETV 240
Query: 215 NALS--MFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
A S + + + + P T ++ G C+ R + R + +E E N + F +
Sbjct: 241 RAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNS 300
Query: 273 VMNCCFR-------------------------CGRLEQGLEILTEMRSKGYTFDGFAYCT 307
++N G + +++LT M+ D Y T
Sbjct: 301 LINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYST 360
Query: 308 VVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
V+ A G + +A ++ ++M+ GV+PD +Y+ + Y R +A EL++ + E
Sbjct: 361 VMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES 420
Query: 368 PGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDG---LGKAGHID 424
N T +I G C +++A++ + M G N+ ++ G + + +
Sbjct: 421 RPN-VVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAE 479
Query: 425 RALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQC 467
L+ G V+ + +L+ R S + L+C
Sbjct: 480 EVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKC 522
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 158/376 (42%), Gaps = 60/376 (15%)
Query: 87 VLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTL 146
V P++ TFN L+ A+C+ + EV+++M+E G+ PD ++YN++ + V+KG
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG------ 237
Query: 147 HMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMING 206
+R + + V + +++ + P+ T +++ G
Sbjct: 238 --------ETVRAE--------------------SEVVEKMVMKEKAKPNGRTCGIVVGG 269
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRA---------------NEA 251
C+ G V + L R ++ ++ +N+LING + NE
Sbjct: 270 YCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEE 329
Query: 252 RRL----------LSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
L L+ +E + + IT++TVMN G +E+ ++ EM G D
Sbjct: 330 VELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPD 389
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
AY + V+ +A+E+ E ++ P++ + T+I + G +D+A+ + +
Sbjct: 390 AHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFN 448
Query: 362 QIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
++ K G + T ++ G + K+ +A + L M G + + AG
Sbjct: 449 KMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAG 508
Query: 422 HIDRALKFFEGMEVRD 437
D + K ++ +D
Sbjct: 509 LTDESNKAINALKCKD 524
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 160/353 (45%), Gaps = 24/353 (6%)
Query: 161 VWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD--PSTATYNVMINGLCKNGYVHNALS 218
V S LM+ G P EA VFK + AET PS +Y ++ + + S
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTL---AETGHRPSLISYTTLLAAMTVQKQYGSISS 101
Query: 219 MFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCF 278
+ +++ G + + +NA+IN ++ +A + L + +E G P T+ T++
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Query: 279 RCGRLEQGLEILTEMRSKGYTFDG---FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
G+ E+ E+L M +G G + +V A K +V EA E+ ++M GV P
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 336 DLASYNTMIYLYFRQGRVDEA-LELVDQ-IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
D +YNT+ Y ++G A E+V++ + KE + T I++ G C+ R+ + ++
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLR 281
Query: 394 HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARR 453
+ M + NLV N +++G + +DR +G+ D T T+L+ +
Sbjct: 282 FVRRMKEMRVEANLVVFNSLINGFVEV--MDR-----DGI---DEVTLTLLLMSFNEEVE 331
Query: 454 FLCASKHLVACL----QCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKA 502
+ K V L +C + T V++ S G +A +V ++ KA
Sbjct: 332 LVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKA 384
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 176/409 (43%), Gaps = 60/409 (14%)
Query: 48 MVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVV---TFNTLIDAYCRF 104
M G +LS + + S+CKA++ + A ++ D V+ ++V TF LI Y R
Sbjct: 127 MKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARA 186
Query: 105 ------------------------------VSFDAGCE---------VLERMK---EAGL 122
V DA C+ LER+ ++
Sbjct: 187 GMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNW 246
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
P V +N L++G R ++++M ++P V +Y L+ Y R+ A
Sbjct: 247 VPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAME 306
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV----PEVLTYNAL 238
V +++ + AE + + +N +I+GL + G + AL M R FV P ++TYN+L
Sbjct: 307 VLEEMKM-AEMEINFMVFNPIIDGLGEAGRLSEALGMME----RFFVCESGPTIVTYNSL 361
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
+ CKA A ++L G +P T+ + + E+G+ + ++ G+
Sbjct: 362 VKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH 421
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
+ D Y ++ L + G++ A ++ ++M + G++PDL + +I+L R ++EA E
Sbjct: 422 SPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE 481
Query: 359 LVDQIEKEGPGNDQYTHTIIIHGLCK------AKRLNEAVQHLDHMNSL 401
D + G T +I +GL AKRL+ + L H L
Sbjct: 482 EFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKL 530
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 161/347 (46%), Gaps = 18/347 (5%)
Query: 163 SYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTAT----YNVMINGLCKNGYVHNALS 218
++ +L+ Y R GM +A R F + S E +AT V+++ LCK G+V A S
Sbjct: 175 TFIVLIRRYARAGMVQQAIRAF-EFARSYEPVCKSATELRLLEVLLDALCKEGHVREA-S 232
Query: 219 MFRNLQRRG------FVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
M+ L+R G +VP V +N L+NG ++R+ +A +L E + +P +T+ T
Sbjct: 233 MY--LERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGT 290
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
++ R R++ +E+L EM+ + + ++ L + GR+ EA + E+
Sbjct: 291 LIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCE 350
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
P + +YN+++ + + G + A +++ + G T+ K + E +
Sbjct: 351 SGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGM 410
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNL 448
+ G + + + +L L + G + A++ + M+ R D T T+L+H L
Sbjct: 411 NLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLL 470
Query: 449 CRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
CR A + ++ G T + + +GL S G+ + AK++
Sbjct: 471 CRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 38/239 (15%)
Query: 27 NPITSFLTQ--RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVK 84
NPI L + R++ + + R V + N + + CKA L A +L +
Sbjct: 324 NPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMT 383
Query: 85 LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
GV P T+N + + + G + ++ EAG +PD ++Y+ ++ G +
Sbjct: 384 RGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSL 443
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
+ + +M I PD+ + +L+H RL M +EA F++
Sbjct: 444 AMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEA---FEE------------------ 482
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
F N RRG +P+ +T+ + NGL ++ A+RL S H
Sbjct: 483 ---------------FDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPH 526
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 15/233 (6%)
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIR--PDVWSYNILMHCYFR 173
RMKE PDV +YN++++ R G F + D+M R PD ++Y IL+ Y R
Sbjct: 190 RMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCR 249
Query: 174 LGMPD-----------EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRN 222
GM EANR+F+++L P TYN +I+G CK + AL +F +
Sbjct: 250 YGMQTGCRKAIRRRMWEANRMFREMLFRGFV-PDVVTYNCLIDGCCKTNRIGRALELFED 308
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE-PNAITFTTVMNCCFRCG 281
++ +G VP +TYN+ I A ++ ++ GH P + T+T +++
Sbjct: 309 MKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETR 368
Query: 282 RLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
R + +++ EM G + Y V AL G DE + M G++
Sbjct: 369 RAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQ 421
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 13/227 (5%)
Query: 128 SYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV 187
S LM +G L F +M E +PDV++YN +++ R+G +A + +
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 188 LLSA-ETDPSTATYNVMINGLCKNGY-----------VHNALSMFRNLQRRGFVPEVLTY 235
L P T TY ++I+ C+ G + A MFR + RGFVP+V+TY
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
N LI+G CK R A L + + G PN +T+ + + +E +E++ M+
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
Query: 296 KGYTFDGFA-YCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYN 341
G+ G + Y ++ ALV+T R EA ++ +M+ G+ P +Y
Sbjct: 347 LGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYK 393
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 123/264 (46%), Gaps = 23/264 (8%)
Query: 196 STATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLL 255
+TA+ ++ L + G+V AL+ F ++ P+V YN +IN LC+ +AR LL
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 256 SEFREAG--HEPNAITFTTVMNCCFRCG-----------RLEQGLEILTEMRSKGYTFDG 302
+ + G + P+ T+T +++ R G R+ + + EM +G+ D
Sbjct: 224 DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
Y ++ KT R+ A E+ E M + G P+ +YN+ I Y ++ A+E++
Sbjct: 284 VTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRT 343
Query: 363 IEKEG---PGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL-- 417
++K G PG+ T+T +IH L + +R EA + M G V D L
Sbjct: 344 MKKLGHGVPGSS--TYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSS 401
Query: 418 -GKAGHIDRAL--KFFEGMEVRDS 438
G A +D L + EG++ R S
Sbjct: 402 EGLASTLDEELHKRMREGIQQRYS 425
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 112/270 (41%), Gaps = 24/270 (8%)
Query: 243 CKARRANEARRLLSEFREAGHEPNA--ITFTTVMNCCFRC----GRLEQGLEILTEMRSK 296
C + N+ + L R+ N + T + C +C G +++ L M+
Sbjct: 135 CLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEY 194
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE--PDLASYNTMIYLYFRQG--- 351
D +AY T++ AL + G +A + +QM G PD +Y +I Y R G
Sbjct: 195 HCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQT 254
Query: 352 --------RVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
R+ EA + ++ G D T+ +I G CK R+ A++ + M + G
Sbjct: 255 GCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGC 314
Query: 404 GFNLVASNCVLDGLGKAGHIDRALKFFEGME-----VRDSFTYTILVHNLCRARRFLCAS 458
N V N + I+ A++ M+ V S TYT L+H L RR A
Sbjct: 315 VPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEAR 374
Query: 459 KHLVACLQCGFQVLKATRRAVIDGLISDGL 488
+V ++ G + T + V D L S+GL
Sbjct: 375 DLVVEMVEAGLVPREYTYKLVCDALSSEGL 404
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 89/230 (38%), Gaps = 54/230 (23%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVL---PDVVTFNTLIDAYCRFVSFDAGCE--VL 114
N I ++C+ KA L+D ++L PD T+ LI +YCR+ GC +
Sbjct: 204 NTIINALCRVGNFKKAR-FLLDQMQLPGFRYPPDTYTYTILISSYCRY-GMQTGCRKAIR 261
Query: 115 ERMKEA----------GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY 164
RM EA G PDV++YN L+ G + L +F+ M P+
Sbjct: 262 RRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN---- 317
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ 224
TYN I + A+ M R ++
Sbjct: 318 --------------------------------QVTYNSFIRYYSVTNEIEGAIEMMRTMK 345
Query: 225 RRGF-VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
+ G VP TY LI+ L + RRA EAR L+ E EAG P T+ V
Sbjct: 346 KLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLV 395
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 194/445 (43%), Gaps = 31/445 (6%)
Query: 12 NAAYPFTHPAILNHENPITSFLTQRITHSKNVTFRIMVKGRSL--STKFLNICIASMCKA 69
N P T P +LN N + + R NVT ++ K + L S K + + K
Sbjct: 151 NMTNPETAPLVLN--NLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKP 208
Query: 70 KQLDKA------ECVLIDGV------------KLGVLPDVVTFNTLIDAYCRFVSFDAGC 111
D A C +GV G PD VT +IDAY R + D
Sbjct: 209 ---DNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMAL 265
Query: 112 EVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCY 171
+ +R + D +++++L+ G + L+++++M ++P++ YN L+
Sbjct: 266 SLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSM 325
Query: 172 FRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
R P +A ++KD++ + T P+ +TY ++ + Y +AL+++R ++ +G
Sbjct: 326 GRAKRPWQAKIIYKDLITNGFT-PNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLT 384
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGH-EPNAITFTTVMNCCFRCGRLEQGLEIL 290
V+ YN L++ R +EA + + + +P++ TF++++ GR+ + L
Sbjct: 385 VILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAAL 444
Query: 291 TEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQ 350
+MR G+ F +V+ K +V + +Q++ G+ PD ++ + Q
Sbjct: 445 LQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNV-MTQ 503
Query: 351 GRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVAS 410
+E +L+ +EK P Q ++ C+ + L ++S+G
Sbjct: 504 TPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASEL--IDSIGSDVKKAYL 561
Query: 411 NCVLDGLGKAGHIDRALKFFE-GME 434
NC++D ++RA + + G+E
Sbjct: 562 NCLIDLCVNLNKLERACEILQLGLE 586
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 131/304 (43%), Gaps = 15/304 (4%)
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYN 236
P+ A V ++L + + YNV + K+ + + +F + RG P+ T+
Sbjct: 155 PETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFT 214
Query: 237 ALI-----NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILT 291
+I NG+ K RA E +S F G EP+ +T +++ R G ++ L +
Sbjct: 215 TIISCARQNGVPK--RAVEWFEKMSSF---GCEPDNVTMAAMIDAYGRAGNVDMALSLYD 269
Query: 292 EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG 351
R++ + D + T++ +G I E+M + GV+P+L YN +I R
Sbjct: 270 RARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAK 329
Query: 352 RVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASN 411
R +A + + G + T+ ++ +A+ ++A+ M G ++ N
Sbjct: 330 RPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYN 389
Query: 412 CVLDGLGKAGHIDRALKFFEGME-----VRDSFTYTILVHNLCRARRFLCASKHLVACLQ 466
+L ++D A + F+ M+ DS+T++ L+ + R A L+ +
Sbjct: 390 TLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMRE 449
Query: 467 CGFQ 470
GF+
Sbjct: 450 AGFE 453
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 141/306 (46%), Gaps = 19/306 (6%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRK-------------- 139
F+ LI + D V+ +++ G+ + + N+L++ R+
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 140 GLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTAT 199
GL +++ KMI +I+P+ ++N +M ++R G + R+++++ P+ +
Sbjct: 225 GLDDVSVDEAKKMI-GKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYS 283
Query: 200 YNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR 259
YNV++ C G + A ++ ++ RG V +++ YN +I GLC +A+ L +
Sbjct: 284 YNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMG 343
Query: 260 EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT---G 316
G E +T+ ++N + G ++ GL + EM+ KG+ DG +V L
Sbjct: 344 LKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQ 403
Query: 317 RVVEADEIAEQMMSNGV-EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTH 375
RVVEA +I + + + P Y ++ G++D AL + ++ +G Q T+
Sbjct: 404 RVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETY 463
Query: 376 TIIIHG 381
I G
Sbjct: 464 RAFIDG 469
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFRE-AGHEPNAITFTTVMNCCFRCGRLEQGLE 288
P T+N+++ + R+ E E G PN ++ +M G + + +
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 289 ILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYF 348
+ EM+ +G +D AY T++ L VV+A E+ M G+E +Y ++ Y
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 349 RQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM-NSLGFGFNL 407
+ G VD L + +++++G D T ++ GLC + V+ D + +++
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFY 422
Query: 408 VASNC---VLDGLGKAGHIDRAL 427
+ NC ++ L + G +DRAL
Sbjct: 423 PSRNCYELLVKRLCEDGKMDRAL 445
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 122/308 (39%), Gaps = 66/308 (21%)
Query: 172 FRLGMPDEAN----RVFKDVLLSAETDPSTA-TYNVMINGLCKNGYVHNALSMFRNLQRR 226
RL DE +VF+ ++ S S ++++I + + A+ + R L+ R
Sbjct: 132 LRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSR 191
Query: 227 GFVPEVLTYNALINGLCKARRA------------------NEARRLLSEFREAGHEPNAI 268
G ++ T NALI + + R A +EA++++ + + PNA
Sbjct: 192 GINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIK-----PNAT 246
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
TF ++M +R G E I EM +E+
Sbjct: 247 TFNSMMVSFYREGETEMVERIWREME---------------------------EEV---- 275
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
G P++ SYN ++ Y +G + EA ++ ++++ G D + +I GLC +
Sbjct: 276 ---GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEV 332
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTIL 444
+A + M G + +++G KAG +D L + M+ + D T L
Sbjct: 333 VKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEAL 392
Query: 445 VHNLCRAR 452
V LC R
Sbjct: 393 VEGLCDDR 400
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 156/345 (45%), Gaps = 19/345 (5%)
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
NTL+D Y + D+ V M + V+SY S+++G R+GL + +F++M E
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSD----RSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATY--NVMINGLCKNGY 212
I PDV++ +++C R + DE RV + + E D + N +++ K G
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI---KENDLGFDIFVSNALMDMYAKCGS 447
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS-EFREAGHEPNAITFT 271
+ A +F ++ V +++++N +I G K ANEA L + E P+ T
Sbjct: 448 MQEAELVFSEMR----VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
V+ C ++G EI + GY D ++V K G ++ +A + +
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL----LAHMLFDD 559
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
DL S+ MI Y G EA+ L +Q+ + G D+ + +++ + ++E
Sbjct: 560 IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Query: 392 VQHLDHM-NSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEV 435
+ + M + + C++D L + G + +A +F E M +
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPI 664
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 163/357 (45%), Gaps = 24/357 (6%)
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
N+L+ Y + D+ +V + M E DVIS+NS+++G V GL L +F +M+
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTE----RDVISWNSIINGYVSNGLAEKGLSVFVQMLV 289
Query: 155 SEIRPDVWS-YNILMHC----YFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
S I D+ + ++ C LG R + + A N +++ K
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLG------RAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
G + +A ++FR + R V++Y ++I G + A EA +L E E G P+ T
Sbjct: 344 CGDLDSAKAVFREMSDRS----VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
T V+NCC R L++G + ++ FD F ++ K G + EA+ + +M
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVD-QIEKEGPGNDQYTHTIIIHGLCKAKRL 388
D+ S+NT+I Y + +EAL L + +E++ D+ T ++
Sbjct: 460 V----KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILV 445
++ + ++ G+ + +N ++D K G + A F+ + +D ++T+++
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 144/317 (45%), Gaps = 9/317 (2%)
Query: 129 YNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL 188
+N LM+ + G F ++ +F KM+ S + D ++++ + + L ++ +L
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 189 LSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRA 248
S + ++ N ++ KN V +A +F + R +V+++N++ING A
Sbjct: 223 KSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSIINGYVSNGLA 277
Query: 249 NEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTV 308
+ + + +G E + T +V C + G + + ++ + T+
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 309 VAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGP 368
+ K G + A + +M V SY +MI Y R+G EA++L +++E+EG
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSV----VSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 369 GNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALK 428
D YT T +++ + + L+E + + + GF++ SN ++D K G + A
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 429 FFEGMEVRDSFTYTILV 445
F M V+D ++ ++
Sbjct: 454 VFSEMRVKDIISWNTII 470
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 143/316 (45%), Gaps = 4/316 (1%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLP-DVVTFNTLIDAYCRFVSFDA 109
G ST+ N + +C+ + A+ V K G +P D ++N +I + + +
Sbjct: 216 GVKCSTESFNALLRCLCERSHVSAAKSVF--NAKKGNIPFDSCSYNIMISGWSKLGEVEE 273
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
+VL+ M E+G PD +SY+ L+ G R G ++ +FD + PD YN ++
Sbjct: 274 MEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMIC 333
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
+ DE+ R ++ +L E +P+ TY+ +++GL K V +AL +F + RG +
Sbjct: 334 NFISARDFDESMRYYRR-MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVL 392
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P + + LC + A + + R+AG + + ++ R G+ L +
Sbjct: 393 PTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNV 452
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
EM+ GY D Y +V L G + A + E+ M G P+ Y+ +
Sbjct: 453 WDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMA 512
Query: 350 QGRVDEALELVDQIEK 365
+ + A +L +I+K
Sbjct: 513 SNKTELAYKLFLKIKK 528
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 171/392 (43%), Gaps = 8/392 (2%)
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
++E G+T DV SY+ ++ R+ LF + + M+ + PD+ I M + R+
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVP-EVLTY 235
A +F++ S ST ++N ++ LC+ +V A S+F ++G +P + +Y
Sbjct: 202 VRRAIELFEESE-SFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSY 258
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
N +I+G K E ++L E E+G P+ ++++ ++ R GR+ +EI ++
Sbjct: 259 NIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKH 318
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDE 355
KG D Y ++ + E+ +M+ EP+L +Y+ ++ + +V +
Sbjct: 319 KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSD 378
Query: 356 ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD 415
ALE+ +++ G T + LC + A+ G + A +L
Sbjct: 379 ALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLK 438
Query: 416 GLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQV 471
L + G L ++ M+ D Y +V LC A + ++ GF
Sbjct: 439 RLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCP 498
Query: 472 LKATRRAVIDGLISDGLKNEAKKVRLKIRKAQ 503
+ + L++ A K+ LKI+KA+
Sbjct: 499 NRFVYSRLSSKLMASNKTELAYKLFLKIKKAR 530
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 150/347 (43%), Gaps = 4/347 (1%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
GV DV +++ ++ A R F +VL+ M G+ PD+ M VR
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+ +F++ ++ S+N L+ C A VF + D + +YN+MI+
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFD--SCSYNIMIS 263
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
G K G V + + + GF P+ L+Y+ LI GL + R N++ + + G+ P
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 266 NAITFTTVMNCCFRCGR-LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
+A + M C F R ++ + M + + Y +V+ L+K +V +A EI
Sbjct: 324 DANVYNA-MICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
E+M+S GV P + + G A+ + + K G + + +++ L +
Sbjct: 383 FEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSR 442
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE 431
+ + D M G+ ++ ++DGL GH++ A+ E
Sbjct: 443 FGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVME 489
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 89/230 (38%), Gaps = 41/230 (17%)
Query: 79 LIDGVK-LGVLPDVVTFNTLIDAYCRFVS---FDAGCEVLERMKEAGLTPDVISYNSLMS 134
+ D +K G +PD +N +I C F+S FD RM + P++ +Y+ L+S
Sbjct: 312 IFDNIKHKGNVPDANVYNAMI---CNFISARDFDESMRYYRRMLDEECEPNLETYSKLVS 368
Query: 135 GAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFK--------- 185
G ++ L +F++M+ + P + G P A +++
Sbjct: 369 GLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRI 428
Query: 186 -------------------------DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMF 220
D + + Y +++GLC G++ NA+ +
Sbjct: 429 SESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVM 488
Query: 221 RNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
R+GF P Y+ L + L + + A +L + ++A NA +F
Sbjct: 489 EEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 151/377 (40%), Gaps = 39/377 (10%)
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
TP + Y L + + +M + + + ++ Y + G D+A
Sbjct: 108 TPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVE 167
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
+F V + + YN +++ LC H A ++ R + R+G P+ TY L+NG
Sbjct: 168 LFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGW 227
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
C A + EA+ L E G P A ++ G LE E++++M G+ D
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDI 287
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
+ ++ A+ K+G V E+ G+ D+ +Y T+I + G++DEA L++
Sbjct: 288 QTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNN 347
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
++G + II G+C + G
Sbjct: 348 CVEDGHKPFPSLYAPIIKGMC-----------------------------------RNGM 372
Query: 423 IDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRA 478
D A FF M+V+ + YT+L+ R +F+ A+ +LV + G +
Sbjct: 373 FDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDM 432
Query: 479 VIDGLISDGLKNEAKKV 495
V DGL + G + A ++
Sbjct: 433 VTDGLKNGGKHDLAMRI 449
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 153/354 (43%), Gaps = 13/354 (3%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
P + + L + +++ ++L++MK+ L + ++ + G + +
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 149 FD---KMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
F+ K + + DV YN L+H + M A + + ++ P TY +++N
Sbjct: 169 FNGVPKTLGCQQTVDV--YNSLLHALCDVKMFHGAYALIRRMIRKG-LKPDKRTYAILVN 225
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
G C G + A + RRGF P + LI GL A A+ ++S+ + G P
Sbjct: 226 GWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVP 285
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
+ TF ++ + G +E +E+ G D Y T++ A+ K G++ EA +
Sbjct: 286 DIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLL 345
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
+ +G +P + Y +I R G D+A ++ + ++ +T++I +
Sbjct: 346 NNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRG 405
Query: 386 KRLNEAVQHLDHMNSLGFGFNLVASNC---VLDGLGKAGHIDRALKFFEGMEVR 436
+ +A +L M +G + S C V DGL G D A++ E +EV+
Sbjct: 406 GKFVDAANYLVEMTEMGL---VPISRCFDMVTDGLKNGGKHDLAMR-IEQLEVQ 455
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 139/336 (41%), Gaps = 19/336 (5%)
Query: 11 FNAAY--PFTHPAILNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMC- 67
FN A P P + +E S + + S ++I+ + + LS L+I ++C
Sbjct: 98 FNWARSNPSYTPTSMEYEELAKSLASHKKYES---MWKILKQMKDLS---LDISGETLCF 151
Query: 68 ------KAKQLDKAECVLIDGVK--LGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
K +D+A L +GV LG V +N+L+ A C F ++ RM
Sbjct: 152 IIEQYGKNGHVDQA-VELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIR 210
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
GL PD +Y L++G G D+M P ++L+ G +
Sbjct: 211 KGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLES 270
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A + + P T+N++I + K+G V + M+ + G ++ TY LI
Sbjct: 271 AKEMVSKMTKGGFV-PDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLI 329
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ K + +EA RLL+ E GH+P + ++ R G + ++M+ K +
Sbjct: 330 PAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHP 389
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
+ Y ++ + G+ V+A +M G+ P
Sbjct: 390 PNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/271 (18%), Positives = 122/271 (45%), Gaps = 7/271 (2%)
Query: 228 FVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGL 287
+ P + Y L L ++ ++L + ++ + + T ++ + G ++Q +
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 288 EILTEM-RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
E+ + ++ G Y +++ AL A + +M+ G++PD +Y ++
Sbjct: 167 ELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG 226
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFN 406
+ G++ EA E +D++ + G ++I GL A L A + + M GF +
Sbjct: 227 WCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD 286
Query: 407 LVASNCVLDGLGKAGHIDRALKFFE-----GMEVRDSFTYTILVHNLCRARRFLCASKHL 461
+ N +++ + K+G ++ ++ + G+ V D TY L+ + + + A + L
Sbjct: 287 IQTFNILIEAISKSGEVEFCIEMYYTACKLGLCV-DIDTYKTLIPAVSKIGKIDEAFRLL 345
Query: 462 VACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
C++ G + + +I G+ +G+ ++A
Sbjct: 346 NNCVEDGHKPFPSLYAPIIKGMCRNGMFDDA 376
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 146/329 (44%), Gaps = 2/329 (0%)
Query: 70 KQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE-AGLTPDVIS 128
KQ D+A + + G+ P + + +LI Y + D LE MK + PDV +
Sbjct: 158 KQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFT 217
Query: 129 YNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL 188
+ L+S + G F + + +M + +YN ++ Y + GM +E V D++
Sbjct: 218 FTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMI 277
Query: 189 LSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRA 248
++ P T N +I + S + Q G P++ T+N LI KA
Sbjct: 278 EDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMY 337
Query: 249 NEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTV 308
+ ++ + +T+ V+ + GR+E+ ++ +M+ +G + YC++
Sbjct: 338 KKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSL 397
Query: 309 VAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGP 368
V A K G VV+ D + Q++++ V D +N +I Y + G + EL Q+E+
Sbjct: 398 VNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKC 457
Query: 369 GNDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
D+ T +I A + +AVQ L+
Sbjct: 458 KPDKITFATMIKTYT-AHGIFDAVQELEK 485
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 2/288 (0%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
PDV TF LI C+ FD ++ M G+ ++YN+++ G + G+F +
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272
Query: 149 FDKMIES-EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
MIE + PDV + N ++ Y + + L P T+N++I
Sbjct: 273 LADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMG-VQPDITTFNILILSF 331
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
K G S+ +++R F +TYN +I KA R + + + + G +PN+
Sbjct: 332 GKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNS 391
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
IT+ +++N + G + + +L ++ + D + ++ A + G + E+ Q
Sbjct: 392 ITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQ 451
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTH 375
M +PD ++ TMI Y G D EL Q+ G + T
Sbjct: 452 MEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDIGKKRLTE 499
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 143/349 (40%), Gaps = 48/349 (13%)
Query: 108 DAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE-SEIRPDVWSYNI 166
D + E M GL P + Y SL+S + L + M S+ +PDV+++ +
Sbjct: 161 DQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTV 220
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAE---TDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
L+ C +LG D + K ++L ST TYN +I+G K G S+ ++
Sbjct: 221 LISCCCKLGRFD----LVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADM 276
Query: 224 QRRG-FVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
G +P+V T N++I R + S F+ G +P+ TF ++ + G
Sbjct: 277 IEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGM 336
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
++ ++ M + ++ Y V+ K GR+ + D++ +M GV+P+ +Y +
Sbjct: 337 YKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCS 396
Query: 343 MIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
++ Y + G V + +D + ++ +D T
Sbjct: 397 LVNAYSKAGLVVK----IDSVLRQIVNSDVVLDTPFF----------------------- 429
Query: 403 FGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHN 447
NC+++ G+AG + + + ME R D T+ ++
Sbjct: 430 --------NCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKT 470
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 2/276 (0%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
+ I+ CK + D + ++++ LGV VT+NT+ID Y + F+ VL M
Sbjct: 218 FTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMI 277
Query: 119 EAGLT-PDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
E G + PDV + NS++ + + ++PD+ ++NIL+ + + GM
Sbjct: 278 EDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMY 337
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
+ V D + +T TYN++I K G + +FR ++ +G P +TY +
Sbjct: 338 KKMCSVM-DFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCS 396
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
L+N KA + +L + + + F ++N + G L E+ +M +
Sbjct: 397 LVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERK 456
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
D + T++ G E+ +QM+S+ +
Sbjct: 457 CKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDI 492
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 146/338 (43%), Gaps = 17/338 (5%)
Query: 103 RFVSFDAGCEVLERM--KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEI-RP 159
R + DA + +ER E LT + + A+++ + L +F+ + + P
Sbjct: 83 RILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEP 142
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
+Y L PD+A+ +F +V+LS P+ Y +I+ K+ + A S
Sbjct: 143 RCKTYTKLFKVLGNCKQPDQASLLF-EVMLSEGLKPTIDVYTSLISVYGKSELLDKAFST 201
Query: 220 FRNLQR-RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCF 278
++ P+V T+ LI+ CK R + + ++ E G + +T+ T+++
Sbjct: 202 LEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYG 261
Query: 279 RCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG-----RVVEADEIAEQMMSNGV 333
+ G E+ +L +M G + CT+ + + G R +E+ Q+M GV
Sbjct: 262 KAGMFEEMESVLADMIEDGDSLPDV--CTLNSIIGSYGNGRNMRKMESWYSRFQLM--GV 317
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
+PD+ ++N +I + + G + ++D +EK T+ I+I KA R+ +
Sbjct: 318 QPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDD 377
Query: 394 HLDHMNSLGFGFNLVASNCVLDGLGKAG---HIDRALK 428
M G N + +++ KAG ID L+
Sbjct: 378 VFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLR 415
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 159/355 (44%), Gaps = 9/355 (2%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G P+ F ++ CR +V+ M +G++ V ++ L+SG R G
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+ +F+KMI+ P++ +Y L+ + LGM DEA V V S P N+MI+
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKV-QSEGLAPDIVLCNLMIH 325
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
+ G A +F +L++R VP+ T+ ++++ LC + + + R+ G +
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRIT---HGIGTDF 382
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
+ +T + NC + G L++L+ M K + D + Y ++AL + G A ++
Sbjct: 383 DLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMY 442
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
+ ++ D ++ +I G+ + A+ L + E D ++T+ I GL +A
Sbjct: 443 KIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRA 502
Query: 386 KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF-----EGMEV 435
KR+ EA M G N ++ GL K ++ K EG+E+
Sbjct: 503 KRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVEL 557
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 174/387 (44%), Gaps = 15/387 (3%)
Query: 113 VLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYF 172
++ER+K +G + L+ R ++ + ++ M P+ + N++M F
Sbjct: 95 IIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNF 154
Query: 173 RLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQR---RGFV 229
+L + + A +F+ + + ++++ ++ C G + + + L+R GF
Sbjct: 155 KLNVVNGALEIFEGIRFR-----NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFY 209
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P + ++ C+ +EA +++ +G + ++ +++ FR G ++ +++
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
+M G + + Y +++ V G V EA + ++ S G+ PD+ N MI+ Y R
Sbjct: 270 FNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTR 329
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
GR +EA ++ +EK DQYT I+ LC + + + V + H +G F+LV
Sbjct: 330 LGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF-DLVPRITH--GIGTDFDLVT 386
Query: 410 SNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACL 465
N + + K G+ ALK M + D +TYT+ + LCR A K +
Sbjct: 387 GNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIII 446
Query: 466 QCGFQVLKATRRAVIDGLISDGLKNEA 492
+ + A+ID LI G N A
Sbjct: 447 KEKKHLDAHFHSAIIDSLIELGKYNTA 473
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/338 (19%), Positives = 145/338 (42%), Gaps = 4/338 (1%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT 96
++ + V ++ G S+S ++ ++ ++ + KA + +++G P++VT+ +
Sbjct: 228 VSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTS 287
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
LI + D VL +++ GL PD++ N ++ R G F +F + + +
Sbjct: 288 LIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRK 347
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
+ PD +++ ++ G D R+ + TD T N++ N K GY A
Sbjct: 348 LVPDQYTFASILSSLCLSGKFDLVPRITHGI----GTDFDLVTGNLLSNCFSKIGYNSYA 403
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC 276
L + + + F + TY ++ LC+ A ++ + +A + +++
Sbjct: 404 LKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDS 463
Query: 277 CFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPD 336
G+ + + + Y D +Y + LV+ R+ EA + M G+ P+
Sbjct: 464 LIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPN 523
Query: 337 LASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYT 374
+Y T+I ++ ++ +++ + +EG D T
Sbjct: 524 RRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNT 561
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 36/248 (14%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
KL + PD+V++NTLI A C S +L+ ++ GL PD++++N+L+ + KG F
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
+ ++ KM+E + D+ TYN
Sbjct: 233 LGEEIWAKMVEKNVAIDI------------------------------------RTYNAR 256
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
+ GL +++F L+ G P+V ++NA+I G + +EA E + G+
Sbjct: 257 LLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGY 316
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
P+ TF ++ + G E +E+ E SK Y +V LVK + EA+E
Sbjct: 317 RPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEE 376
Query: 324 IAEQMMSN 331
I + +N
Sbjct: 377 IVKIAKTN 384
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 120/261 (45%), Gaps = 2/261 (0%)
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
++ Y + GM + A +VF++ + + + S ++N +++ + +F L +
Sbjct: 115 IISLYGKAGMFENAQKVFEE-MPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGK 173
Query: 227 -GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQ 285
P++++YN LI LC+ EA LL E G +P+ +TF T++ + G+ E
Sbjct: 174 LSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFEL 233
Query: 286 GLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIY 345
G EI +M K D Y + L + E + ++ ++G++PD+ S+N MI
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
Query: 346 LYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGF 405
+G++DEA +I K G D+ T +++ +CKA A++ S +
Sbjct: 294 GSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLV 353
Query: 406 NLVASNCVLDGLGKAGHIDRA 426
++D L K + A
Sbjct: 354 GQTTLQQLVDELVKGSKREEA 374
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 101/196 (51%), Gaps = 1/196 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I ++C+ L +A +L + G+ PD+VTFNTL+ + F+ G E+ +M E
Sbjct: 184 NTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVE 243
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
+ D+ +YN+ + G + +++F ++ S ++PDV+S+N ++ G DE
Sbjct: 244 KNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDE 303
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A +K+++ P AT+ +++ +CK G +A+ +F+ + ++ T L+
Sbjct: 304 AEAWYKEIVKHG-YRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLV 362
Query: 240 NGLCKARRANEARRLL 255
+ L K + EA ++
Sbjct: 363 DELVKGSKREEAEEIV 378
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/288 (18%), Positives = 134/288 (46%), Gaps = 14/288 (4%)
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
+R++ + GF +++ KA A+++ E + + ++F +++
Sbjct: 103 YRDMSKEGFAARIISLYG------KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRL 156
Query: 280 CGRLEQGLEILTEMRSK-GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLA 338
+ + E+ E+ K D +Y T++ AL + + EA + +++ + G++PD+
Sbjct: 157 SKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIV 216
Query: 339 SYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM 398
++NT++ + +G+ + E+ ++ ++ D T+ + GL + E V +
Sbjct: 217 TFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGEL 276
Query: 399 NSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR-----DSFTYTILVHNLCRARR 453
+ G ++ + N ++ G G +D A +++ + V+ D T+ +L+ +C+A
Sbjct: 277 KASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEI-VKHGYRPDKATFALLLPAMCKAGD 335
Query: 454 FLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRK 501
F A + + V + T + ++D L+ + EA+++ +KI K
Sbjct: 336 FESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI-VKIAK 382
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 170/373 (45%), Gaps = 28/373 (7%)
Query: 84 KLGVLPDVVTFNTLIDAY--CRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGL 141
KLG+ D+ N LID Y C + ++ E+M E D +S+NS++ G V+ G
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGE 200
Query: 142 FPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYN 201
+FD+M + D+ S+N ++ Y R E ++ F+ L + +T +++
Sbjct: 201 LRDARRLFDEMPQR----DLISWNTMLDGYARC---REMSKAFE--LFEKMPERNTVSWS 251
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
M+ G K G + A MF + V+T+ +I G + EA RL+ + +
Sbjct: 252 TMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
G + +A +++ C G L G+ I + ++ + + ++ K G + +A
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHG 381
++ ++ + DL S+NTM++ G EA+EL ++ +EG D+ T ++
Sbjct: 370 FDV----FNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCS 425
Query: 382 LCKAKRLNEAVQHLDHMNSLGFGFNLVAS----NCVLDGLGKAGHIDRALKFFEGMEVRD 437
A ++E + D+ S+ ++LV C++D LG+ G + A+K + M +
Sbjct: 426 CNHAGLIDEGI---DYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEP 482
Query: 438 SFTYTILVHNLCR 450
+ + CR
Sbjct: 483 NVVIWGALLGACR 495
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 164/348 (47%), Gaps = 23/348 (6%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
P+V N+LI A+ + V M+ GL D +Y L+ + P+ M
Sbjct: 80 PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139
Query: 149 FDKMIESEIRPDVWSYNILMHCYFR---LGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+ + + + D++ N L+ CY R LG+ D A ++F+ + +E D T ++N M+
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRD-AMKLFEKM---SERD--TVSWNSMLG 193
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
GL K G + +A +F + +R +++++N +++G + R ++A L + E
Sbjct: 194 GLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER---- 245
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
N ++++T++ + G +E + +M + ++A + G + EAD +
Sbjct: 246 NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNV--VTWTIIIAGYAEKGLLKEADRLV 303
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
+QM+++G++ D A+ +++ G + + + +++ G++ Y ++ K
Sbjct: 304 DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKC 363
Query: 386 KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
L +A D N + +LV+ N +L GLG GH A++ F M
Sbjct: 364 GNLKKA---FDVFNDIP-KKDLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 140/317 (44%), Gaps = 54/317 (17%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D++++NT++D Y R E+ E+M E + +S+++++ G + G M MF
Sbjct: 215 DLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMF 270
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV--------------LLSAETDP 195
DKM +V ++ I++ Y G+ EA+R+ + +L+A T+
Sbjct: 271 DKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 196 STATYNVMINGLCK------NGYVHNAL--------------SMFRNLQRRGFVPEVLTY 235
+ + I+ + K N YV NAL +F ++ ++ V ++
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV----SW 384
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
N +++GL EA L S R G P+ +TF V+ C G +++G++ M
Sbjct: 385 NTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEK 444
Query: 296 KGYTFDGFA----YCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG 351
+D Y +V L + GR+ EA ++ + M +EP++ + ++
Sbjct: 445 ---VYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALLGACRMHN 498
Query: 352 RVDEALELVDQIEKEGP 368
VD A E++D + K P
Sbjct: 499 EVDIAKEVLDNLVKLDP 515
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 123/333 (36%), Gaps = 75/333 (22%)
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
A RVF V +P+ N +I +N + A +F +QR G + TY L+
Sbjct: 70 AVRVFNQV-----QEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLL 124
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ + + + G + +++C RCG L G+ ++ K
Sbjct: 125 KACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGL--GVRDAMKLFEKMSE 182
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
D ++ +++ LVK G + +A + ++M + DL S+NTM+ Y R + +A EL
Sbjct: 183 RDTVSWNSMLGGLVKAGELRDARRLFDEM----PQRDLISWNTMLDGYARCREMSKAFEL 238
Query: 360 VDQIEKEG-----------------------------PGNDQYTHTIIIHGLCKAKRLNE 390
+++ + P + T TIII G + L E
Sbjct: 239 FEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKE 298
Query: 391 AVQHLDHMNSLGFGFNLVAS-----------------------------------NCVLD 415
A + +D M + G F+ A N +LD
Sbjct: 299 ADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLD 358
Query: 416 GLGKAGHIDRALKFFEGMEVRDSFTYTILVHNL 448
K G++ +A F + +D ++ ++H L
Sbjct: 359 MYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGL 391
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 161/345 (46%), Gaps = 22/345 (6%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
DVV++NT+I Y + D ++ + DV ++ +++SG ++ + +F
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESP----VQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
DKM E R +V S+N ++ Y + + A +F DV+ + +T+N MI G +
Sbjct: 305 DKMPE---RNEV-SWNAMLAGYVQGERMEMAKELF-DVMPCR----NVSTWNTMITGYAQ 355
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
G + A ++F + +R + +++ A+I G ++ + EA RL + G N +
Sbjct: 356 CGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSS 411
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
F++ ++ C LE G ++ + GY F ++ K G + EA+++ ++M
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
D+ S+NTMI Y R G + AL + +++EG D T ++ ++
Sbjct: 472 GK----DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 390 EAVQHLDHM-NSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
+ Q+ M G N C++D LG+AG ++ A + M
Sbjct: 528 KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 168/372 (45%), Gaps = 60/372 (16%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D+ +N I +Y R + V +RM +SYN ++SG +R G F + +F
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARKLF 118
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
D+M E D+ S+N+++ Y R +A +F+ + E D ++N M++G +
Sbjct: 119 DEMPER----DLVSWNVMIKGYVRNRNLGKARELFE---IMPERD--VCSWNTMLSGYAQ 169
Query: 210 NGYVHNALSMFRNLQRRGFVP---------------------------EVLTYNALINGL 242
NG V +A S+F + + V ++++N L+ G
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
K ++ EAR +F ++ + + +++ T++ + G++++ ++ E + D
Sbjct: 230 VKKKKIVEAR----QFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DV 281
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
F + +V+ ++ V EA E+ ++M E + S+N M+ Y + R++ A EL D
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDV 337
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
+ P + T +I G + +++EA D M + V+ ++ G ++GH
Sbjct: 338 M----PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGH 389
Query: 423 IDRALKFFEGME 434
AL+ F ME
Sbjct: 390 SFEALRLFVQME 401
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 169/407 (41%), Gaps = 91/407 (22%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D+V++N +I Y R + E+ E M E DV S+N+++SG + G +F
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
D+M E + DV S+N L+ Y + +EA +FK + + + ++N ++ G K
Sbjct: 181 DRMPE---KNDV-SWNALLSAYVQNSKMEEACMLFK-----SRENWALVSWNCLLGGFVK 231
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE------------ 257
+ A F ++ V +V+++N +I G ++ + +EAR+L E
Sbjct: 232 KKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAM 287
Query: 258 ---------FREAGH------EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
EA E N +++ ++ + R+E E+ M + +
Sbjct: 288 VSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS--- 344
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
+ T++ + G++ EA + ++M + D S+ MI Y + G EAL L Q
Sbjct: 345 -TWNTMITGYAQCGKISEAKNLFDKM----PKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 363 IEKEGPGNDQYT--------------------HTIIIHG---------------LCKAKR 387
+E+EG ++ + H ++ G CK
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
+ EA M G ++V+ N ++ G + G + AL+FFE M+
Sbjct: 460 IEEANDLFKEMA----GKDIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 127/293 (43%), Gaps = 60/293 (20%)
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
D+ +N+ + Y R G +EA RVFK + S+ +YN MI+G +NG A +
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRM-----PRWSSVSYNGMISGYLRNGEFELARKL 117
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
F + R +++++N +I G + R +AR L
Sbjct: 118 FDEMPER----DLVSWNVMIKGYVRNRNLGKARELF------------------------ 149
Query: 280 CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
EI+ E D ++ T+++ + G V +A + ++M E + S
Sbjct: 150 --------EIMPER-------DVCSWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVS 190
Query: 340 YNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMN 399
+N ++ Y + +++EA L E + ++ G K K++ EA Q D MN
Sbjct: 191 WNALLSAYVQNSKMEEACMLFKSRENWA----LVSWNCLLGGFVKKKKIVEARQFFDSMN 246
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRAR 452
++V+ N ++ G ++G ID A + F+ V+D FT+T +V + R
Sbjct: 247 VR----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNR 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 8/215 (3%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
VK G N L+ YC+ S + ++ + M AG D++S+N++++G R G
Sbjct: 436 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM--AG--KDIVSWNTMIAGYSRHGFG 491
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
+ L F+ M ++PD + ++ G+ D+ + F + P++ Y
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC 551
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
M++ L + G + +A ++ +N+ F P+ + L+ G + E ++ A
Sbjct: 552 MVDLLGRAGLLEDAHNLMKNMP---FEPDAAIWGTLL-GASRVHGNTELAETAADKIFAM 607
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
N+ + + N GR ++ MR KG
Sbjct: 608 EPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 138/280 (49%), Gaps = 10/280 (3%)
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA-TYNVMINGLCKNGYVHNALS 218
D +++I+ ++G ++A +FK +L + P T +I+ LC G+V AL
Sbjct: 137 DKQTFSIVAETLVKVGKEEDAIGIFK--ILDKFSCPQDGFTVTAIISALCSRGHVKRALG 194
Query: 219 MFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC-C 277
+ + + E+ Y +L+ G R EARR++ + + AG P+ F +++ C C
Sbjct: 195 VMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLC 254
Query: 278 FR------CGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
R G + + L I+ EMRS +Y +++ L +T RV E+ +I EQM +
Sbjct: 255 ERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRS 314
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
G +PD SY ++ + + GR + ++VD++ + G ++ + +I LC +R+N A
Sbjct: 315 GCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFA 374
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE 431
+Q + M G + ++ L K G+ ++ + +E
Sbjct: 375 LQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWE 414
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 150/353 (42%), Gaps = 18/353 (5%)
Query: 27 NPITSFLTQRITHSKNVT--------FRIMVK--GRSLSTKFLNICIASMCKAKQLDKAE 76
+P ++ +TQ I KN T F K G SL K N + + + K +
Sbjct: 64 SPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQ 123
Query: 77 CVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGA 136
+L D K D TF+ + + + + + + + + D + +++S
Sbjct: 124 ILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISAL 183
Query: 137 VRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPS 196
+G L + + ++ Y L+ + EA RV +D + SA P
Sbjct: 184 CSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQD-MKSAGITPD 242
Query: 197 TATYNVMINGLCK-------NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRAN 249
+N ++ LC+ +G V AL++ ++ P ++YN L++ L + RR
Sbjct: 243 LFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVR 302
Query: 250 EARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVV 309
E+ ++L + + +G +P+ ++ V+ + GR +G +I+ EM +G+ + Y ++
Sbjct: 303 ESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLI 362
Query: 310 AALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
L RV A ++ E+M + V Y+ +I + G ++ EL ++
Sbjct: 363 GVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEE 415
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 9/250 (3%)
Query: 128 SYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYN-ILMHCYFRLGMPDEANRVFKD 186
+Y++++ A+ + +++I V YN I+ C R + + A V+
Sbjct: 110 AYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNK 169
Query: 187 VLLSAETDPSTATYNVMINGLCKN--------GYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+L S ++ P TY ++++ L K Y+H S+ + ++ G +P+ N +
Sbjct: 170 MLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMI 229
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I K +EA R+ E G EPNA T++ ++ GR+ QGL EM+ KG
Sbjct: 230 IKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGM 289
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALE 358
+G Y ++ +L R+ EA E+ M++N + PD+ +YNT++ R GR EALE
Sbjct: 290 VPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALE 349
Query: 359 LVDQIEKEGP 368
+V++ +K P
Sbjct: 350 MVEEWKKRDP 359
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 7/182 (3%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
LN+C + + L K GV+PD N +I AY + + D V + M
Sbjct: 197 LNVCYVYLHAVRSLTK------QMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMA 250
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
G P+ +Y+ L+ G KG L + +M + P+ Y +L+ D
Sbjct: 251 LYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLD 310
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
EA V D +L+ P TYN ++ LC+ G AL M ++R V Y L
Sbjct: 311 EAVEVVYD-MLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTL 369
Query: 239 IN 240
++
Sbjct: 370 MD 371
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 106/263 (40%), Gaps = 35/263 (13%)
Query: 216 ALSMFR-NLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
AL +FR Q+RG+ Y+ +I +R N L+ E E + + ++
Sbjct: 91 ALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCII 150
Query: 275 NCCFRCGR---LEQGLEILTEM-RS-------KGYT---------FDGFAYCTVVAALVK 314
C CGR + ++ +M RS + YT F+ C V V+
Sbjct: 151 RFC--CGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVR 208
Query: 315 TGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYT 374
+ + +QM SNGV PD N +I Y + VDEA+ + ++ G + YT
Sbjct: 209 S--------LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYT 260
Query: 375 HTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGME 434
++ ++ G+C+ R+ + + M G N ++ L +D A++ M
Sbjct: 261 YSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDML 320
Query: 435 VR----DSFTYTILVHNLCRARR 453
D TY ++ LCR R
Sbjct: 321 ANSLSPDMLTYNTVLTELCRGGR 343
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 36/160 (22%)
Query: 151 KMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKN 210
+M + + PD + N+++ Y + DEA RVFK++ L ++P+ TY+ ++ G+C+
Sbjct: 213 QMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYG-SEPNAYTYSYLVKGVCEK 271
Query: 211 GYVHNALSMFRNLQRRGFVP-----------------------------------EVLTY 235
G V L ++ +Q +G VP ++LTY
Sbjct: 272 GRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTY 331
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
N ++ LC+ R +EA ++ E+++ + T+M+
Sbjct: 332 NTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 196 STATYNVMINGLCKNGYVHN-ALSMFRNLQRRG-FVPEVLTYNALINGLCKARRANE--- 250
S YN +I C ++ N A ++ + R P++ TY L++ L K R N+
Sbjct: 142 SVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLK--RFNKLNV 199
Query: 251 -------ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGF 303
R L + + G P+ ++ +C +++ + + EM G + +
Sbjct: 200 CYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAY 259
Query: 304 AYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQI 363
Y +V + + GRV + ++M G+ P+ + Y +I + R+DEA+E+V +
Sbjct: 260 TYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDM 319
Query: 364 EKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
D T+ ++ LC+ R +EA++ ++
Sbjct: 320 LANSLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 152/336 (45%), Gaps = 16/336 (4%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
GVL ++ N LI + + A +V + +E G TP+ +Y + ++
Sbjct: 227 GVL-NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWA 285
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+ +KM++S + + ++ + + G +EA V+ ++ + E +I
Sbjct: 286 CSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVY-ELAKTKEKSLPPRFVATLIT 344
Query: 206 GLCKN-GYVHNALSMFRNL----QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
LCKN G + A M +L +RRG P ++ +I+ LC+ R +A+ LL +
Sbjct: 345 ALCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMIS 400
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVE 320
G P F V++ C + G L++ E+L M S+G D + Y +++ K G + E
Sbjct: 401 KGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDE 460
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG--PGNDQYTHTII 378
A EI + + +Y+ +I Y + DEAL+L++++++ G P D+Y +
Sbjct: 461 AQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNK--L 518
Query: 379 IHGLC-KAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
I C KA +A + M G N ++ +
Sbjct: 519 IQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLI 554
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 126/291 (43%), Gaps = 8/291 (2%)
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ 224
N L+ + +LG A VF T P+ TY + + LCK ++ A S+ +
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFT-PNAKTYYLTLEALCKRSFMDWACSVCEKML 293
Query: 225 RRGFVPEVLTYNALINGLCKARRANEARRL--LSEFREAGHEPNAITFTTVMNCCFRCGR 282
+ G + E +I CK +A EA + L++ +E P + T + C G
Sbjct: 294 KSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA-TLITALCKNDGT 352
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
+ E+L ++ + + V+ +L + V +A + M+S G P A +N
Sbjct: 353 ITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNL 412
Query: 343 MIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
+++ + G +DEA E++ +E G D YT+T+II G K ++EA + L
Sbjct: 413 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH 472
Query: 403 FGFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLC 449
+ V + ++ G K D ALK M+ ++ Y L+ + C
Sbjct: 473 KKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 93/234 (39%), Gaps = 37/234 (15%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT 96
IT ++ + + + R K + I S+C+ + + A+ +L+D + G P FN
Sbjct: 353 ITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNL 412
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
++ A + D EVL+ M+ GL PDV +Y ++SG
Sbjct: 413 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISG--------------------- 451
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
Y + GM DEA + + S TY+ +I G CK A
Sbjct: 452 --------------YAKGGMMDEAQEILAEA-KKKHKKLSPVTYHALIRGYCKIEEYDEA 496
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLC-KARRANEARRLLSEFREAGHEPNAIT 269
L + + R G P YN LI C KA +A L E ++ G NAI+
Sbjct: 497 LKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAIS 550
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 119/284 (41%), Gaps = 38/284 (13%)
Query: 51 GRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAG 110
G + + K + + ++CK +D A V +K GVL + +I +C+ +
Sbjct: 261 GFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEA 320
Query: 111 CEVLE--RMKEAGLTP--------------DVISYNSLMSG-----AVRKGLFPMT--LH 147
V E + KE L P I++ M G A R+G+ P + +H
Sbjct: 321 YSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIH 380
Query: 148 -------------MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD 194
+ MI P +N+++H + G DEA V K ++ S
Sbjct: 381 SLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLK-LMESRGLK 439
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
P TY V+I+G K G + A + +++ +TY+ALI G CK +EA +L
Sbjct: 440 PDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKL 499
Query: 255 LSEFREAGHEPNAITFTTVMNC-CFRCGRLEQGLEILTEMRSKG 297
L+E G +PNA + ++ C + E+ + EM+ KG
Sbjct: 500 LNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKG 543
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 105/275 (38%), Gaps = 5/275 (1%)
Query: 201 NVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
N +I K G A +F + GF P TY + LCK + A + + +
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT-GRVV 319
+G ++ + G+ E+ + ++K + T++ AL K G +
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTIT 354
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIII 379
A E+ + + ++ +I+ R V +A L+ + +GP +++
Sbjct: 355 FAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVV 414
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR--- 436
H K L+EA + L M S G ++ ++ G K G +D A + + +
Sbjct: 415 HACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKK 474
Query: 437 -DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQ 470
TY L+ C+ + A K L + G Q
Sbjct: 475 LSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQ 509
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 116/246 (47%)
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
+FD+M E V S+N L+ Y DEA + FK++ P TYN MI L
Sbjct: 144 LFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKAL 203
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
C+ G + + LS+F L++ GF P+++++N L+ + E R+ + PN
Sbjct: 204 CRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNI 263
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
++ + + R + L ++ M+++G + D Y ++ A + E + +
Sbjct: 264 RSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNE 323
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M G+ PD +Y +I L ++G +D A+E+ ++ K + + ++ L A +
Sbjct: 324 MKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGK 383
Query: 388 LNEAVQ 393
++EA Q
Sbjct: 384 IDEATQ 389
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 1/196 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N I ++C+ +D + + K G PD+++FNTL++ + R F G + + MK
Sbjct: 197 NTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
L+P++ SYNS + G R F L++ D M I PDV +YN L+ Y +E
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
+ + ++ T P T TY ++I LCK G + A+ + + + Y ++
Sbjct: 317 VMKCYNEMKEKGLT-PDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375
Query: 240 NGLCKARRANEARRLL 255
L A + +EA +L+
Sbjct: 376 ERLMGAGKIDEATQLV 391
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 1/223 (0%)
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA-GHEPNAI 268
+G +A +F + V ++NAL++ +++ +EA + E E G P+ +
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
T+ T++ R G ++ L I E+ G+ D ++ T++ + VE D I + M
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
S + P++ SYN+ + R + +AL L+D ++ EG D +T+ +I L
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE 431
E ++ + M G + V ++ L K G +DRA++ E
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSE 357
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 101/208 (48%), Gaps = 5/208 (2%)
Query: 248 ANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK-GYTFDGFAYC 306
A A +L E E E +F +++ +L++ ++ E+ K G T D Y
Sbjct: 138 AEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYN 197
Query: 307 TVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE 366
T++ AL + G + + I E++ NG EPDL S+NT++ ++R+ E + D ++ +
Sbjct: 198 TMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK 257
Query: 367 GPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRA 426
+ ++ + GL + K+ +A+ +D M + G ++ N ++ +++
Sbjct: 258 NLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEV 317
Query: 427 LKFFEGMEVR----DSFTYTILVHNLCR 450
+K + M+ + D+ TY +L+ LC+
Sbjct: 318 MKCYNEMKEKGLTPDTVTYCMLIPLLCK 345
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 158/333 (47%), Gaps = 3/333 (0%)
Query: 71 QLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA-GLTPDVISY 129
+ +AE + ++ GV+ D + F+ ++ Y + S + C VLE M E + PDV +
Sbjct: 573 EFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLF 632
Query: 130 NSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLL 189
++ + L H++ ++ +S I + YN +++C R DE + F++++
Sbjct: 633 RDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIR 692
Query: 190 SAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRAN 249
T P+T T+NV+++ K +F +R G V +V++YN +I K +
Sbjct: 693 YGFT-PNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYT 750
Query: 250 EARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVV 309
+ + G + + T+++ + ++E+ IL M+ D + Y ++
Sbjct: 751 NMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMI 810
Query: 310 AALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPG 369
+ G + E ++ +++ +G+ PDL SYNT+I Y G V+EA+ LV ++
Sbjct: 811 NIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNII 870
Query: 370 NDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
D+ T+T ++ L + EA++ M +G
Sbjct: 871 PDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/479 (19%), Positives = 196/479 (40%), Gaps = 37/479 (7%)
Query: 61 ICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
+ + + + +++ AE +L+ G P+++ +NTLI Y + +A + R+
Sbjct: 319 VMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNI 378
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
GL PD SY S++ G R + H + ++ +P+ ++ L++ + G D A
Sbjct: 379 GLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGA 438
Query: 181 NRVFKD-------------VLLSA-------ETDP-------------STATYNVMINGL 207
+ +D ++L A + P + +++ ++
Sbjct: 439 IKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAY 498
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
K+G V + L + R + R E Y+ LI ++ + +A ++ + E+ E N
Sbjct: 499 VKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINL 558
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
+T+++ G + ++ ++S G D + VV VK G + EA + E
Sbjct: 559 HITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEI 618
Query: 328 M-MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
M + PD+ + M+ +Y + D+ L +I K G +Q + +I+ +A
Sbjct: 619 MDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARAL 678
Query: 387 RLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF---EGMEVRDSFTYTI 443
L+E + M GF N V N +LD GKA + + F + V D +Y
Sbjct: 679 PLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNT 738
Query: 444 LVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKA 502
++ + + + S + GF V ++D D + + + +++K+
Sbjct: 739 IIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKS 797
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 184/452 (40%), Gaps = 40/452 (8%)
Query: 56 TKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLE 115
+ L I + + K ++D CVL + + +F++L+ AY + D +L
Sbjct: 453 SSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLR 512
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
K + Y+ L+ G + +++ +ES+ ++ + ++ Y +G
Sbjct: 513 EKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMG 572
Query: 176 MPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL-QRRGFVPEVLT 234
EA +++ + L S+ +++++ K G + A S+ + +++ VP+V
Sbjct: 573 EFSEAEKLYLN-LKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYL 631
Query: 235 YNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
+ ++ K ++ + L R++G N + V+NCC R L++ EM
Sbjct: 632 FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMI 691
Query: 295 SKGYT----------------------------------FDGFAYCTVVAALVKTGRVVE 320
G+T D +Y T++AA K
Sbjct: 692 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTN 751
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIH 380
+ M +G L +YNT++ Y + ++++ ++ +++K G D YT+ I+I+
Sbjct: 752 MSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN 811
Query: 381 GLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR---- 436
+ ++E L + G G +L + N ++ G G ++ A+ + M R
Sbjct: 812 IYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIP 871
Query: 437 DSFTYTILVHNLCRARRFLCASKHLVACLQCG 468
D TYT LV L R FL A K + Q G
Sbjct: 872 DKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 8/260 (3%)
Query: 41 KNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDA 100
+++ +RI G + + N I +A LD+ + ++ G P+ VTFN L+D
Sbjct: 649 QHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDV 708
Query: 101 YCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPD 160
Y + F E+ K G+ DVISYN++++ + + M
Sbjct: 709 YGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVS 767
Query: 161 VWSYNILMHCYFRLGMPDEANRVFKDVL---LSAETDPSTATYNVMINGLCKNGYVHNAL 217
+ +YN L+ Y + D+ F+ +L + + P TYN+MIN + G++
Sbjct: 768 LEAYNTLLDAYGK----DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVA 823
Query: 218 SMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCC 277
+ + L+ G P++ +YN LI EA L+ E R P+ +T+T ++
Sbjct: 824 DVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Query: 278 FRCGRLEQGLEILTEMRSKG 297
R + ++ M+ G
Sbjct: 884 RRNDEFLEAIKWSLWMKQMG 903
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 111/250 (44%), Gaps = 2/250 (0%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
K G+ + +N +I+ R + D E M G TP+ +++N L+ + LF
Sbjct: 657 KSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFK 716
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
+F + + DV SYN ++ Y + + K++ + S YN +
Sbjct: 717 KVNELF-LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFS-VSLEAYNTL 774
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
++ K+ + S+ + +++ P+ TYN +IN + +E +L E +E+G
Sbjct: 775 LDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGL 834
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
P+ ++ T++ G +E+ + ++ EMR + D Y +V AL + +EA +
Sbjct: 835 GPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIK 894
Query: 324 IAEQMMSNGV 333
+ M G+
Sbjct: 895 WSLWMKQMGI 904
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 166/404 (41%), Gaps = 56/404 (13%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLM-----SGAVRKGLFPMTLHM 148
FNT+I A + + + M E G+ P+V + LM + V + F + HM
Sbjct: 213 FNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFS-HM 271
Query: 149 --FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMING 206
F + ES +Y+ ++ Y RL + D+A V D++ + VM+N
Sbjct: 272 RKFGIVCES-------AYSSMITIYTRLRLYDKAEEVI-DLMKQDRVRLKLENWLVMLNA 323
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING----------------LC------- 243
+ G + A S+ +++ GF P ++ YN LI G LC
Sbjct: 324 YSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPD 383
Query: 244 ------------KARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILT 291
+A EA+ E + G++PN+ T++N + G + ++ +
Sbjct: 384 ETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIE 443
Query: 292 EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG 351
+M G + ++ A K G++ + + N + + S+++++ Y + G
Sbjct: 444 DMTGIGCQYSSIL-GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHG 502
Query: 352 RVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASN 411
VD+ L L+ + + + + + ++I ++ +L +AV+ +H NL ++
Sbjct: 503 MVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITS 562
Query: 412 CVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRA 451
++D G A K + ++ V D ++I+V +A
Sbjct: 563 TMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKA 606
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 1/271 (0%)
Query: 163 SYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRN 222
+Y++++ R D A + K++ E S +N +I K G V A F
Sbjct: 176 AYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHM 235
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
+ G P V T L+ K EA S R+ G + +++++ R
Sbjct: 236 MLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRLRL 294
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
++ E++ M+ + ++ A + G++ A+ I M + G P++ +YNT
Sbjct: 295 YDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNT 354
Query: 343 MIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
+I Y + +++ A L ++ G D+ ++ +I G +A EA + + G
Sbjct: 355 LITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCG 414
Query: 403 FGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
+ N +++ K G D A+K E M
Sbjct: 415 YKPNSFNLFTLINLQAKYGDRDGAIKTIEDM 445
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 170/370 (45%), Gaps = 22/370 (5%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D ++ T++ Y + FD G E+LE M + +++YN+++SG V +G + L M
Sbjct: 218 DERSWTTMMTGYVKNGYFDLGEELLEGMDD---NMKLVAYNAMISGYVNRGFYQEALEMV 274
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
+M+ S I D ++Y ++ G+ +V VL D S N +++ K
Sbjct: 275 RRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL--RREDFSFHFDNSLVSLYYK 332
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
G A ++F + + +++++NAL++G + EA+ + E +E N ++
Sbjct: 333 CGKFDEARAIFEKMPAK----DLVSWNALLSGYVSSGHIGEAKLIFKEMKE----KNILS 384
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
+ +++ G E+GL++ + M+ +G+ +A+ + + G + Q++
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
G + L++ N +I +Y + G V+EA Q+ + P D + +I L +
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEA----RQVFRTMPCLDSVSWNALIAALGQHGHGA 500
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEV-----RDSFTYTIL 444
EAV + M G + + VL AG +D+ K+F+ ME + Y L
Sbjct: 501 EAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARL 560
Query: 445 VHNLCRARRF 454
+ LCR+ +F
Sbjct: 561 IDLLCRSGKF 570
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 165/406 (40%), Gaps = 68/406 (16%)
Query: 52 RSLSTKF---LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFD 108
R+++ ++ L +C+ + QL +A V + + G P N LID YC+ +
Sbjct: 9 RAIANRYAANLRLCLPLRRTSLQLARA--VHGNIITFGFQPRAHILNRLIDVYCKSSELN 66
Query: 109 AGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILM 168
++ + + E PD I+ +++SG G + +F+K
Sbjct: 67 YARQLFDEISE----PDKIARTTMVSGYCASGDITLARGVFEK----------------- 105
Query: 169 HCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF 228
A +D T YN MI G N ++A+++F ++ GF
Sbjct: 106 -----------APVCMRD----------TVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 229 VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN--------CCFRC 280
P+ T+ +++ GL A A++ ++ + +F A + A T+V N C
Sbjct: 145 KPDNFTFASVLAGL--ALVADDEKQCV-QFHAAALKSGAGYITSVSNALVSVYSKCASSP 201
Query: 281 GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASY 340
L ++ E+ K D ++ T++ VK G +E+ E M N L +Y
Sbjct: 202 SLLHSARKVFDEILEK----DERSWTTMMTGYVKNGYFDLGEELLEGMDDN---MKLVAY 254
Query: 341 NTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ-HLDHMN 399
N MI Y +G EALE+V ++ G D++T+ +I A L Q H +
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 400 SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILV 445
F F+ N ++ K G D A FE M +D ++ L+
Sbjct: 315 REDFSFHF--DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALL 358
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/396 (20%), Positives = 157/396 (39%), Gaps = 51/396 (12%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSG-------------- 135
D V +N +I + + + +MK G PD ++ S+++G
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF 171
Query: 136 ---AVRKGL-------------------FPMTLHMFDKMIESEIRPDVWSYNILMHCYFR 173
A++ G P LH K+ + + D S+ +M Y +
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 174 LGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
G D + +++L + + YN MI+G G+ AL M R + G +
Sbjct: 232 NGYFD----LGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEF 287
Query: 234 TYNALINGLCKARRANEARRLLSEFREAGHEPNAITF-TTVMNCCFRCGRLEQGLEILTE 292
TY ++I A +++ + E + F ++++ ++CG+ ++ I +
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLR--REDFSFHFDNSLVSLYYKCGKFDEARAIFEK 345
Query: 293 MRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGR 352
M +K D ++ +++ V +G + EA I ++M E ++ S+ MI G
Sbjct: 346 MPAK----DLVSWNALLSGYVSSGHIGEAKLIFKEMK----EKNILSWMIMISGLAENGF 397
Query: 353 VDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNC 412
+E L+L +++EG Y + I Q+ + +GF +L A N
Sbjct: 398 GEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNA 457
Query: 413 VLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNL 448
++ K G ++ A + F M DS ++ L+ L
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL 493
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 172/371 (46%), Gaps = 23/371 (6%)
Query: 87 VLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTL 146
V PD +F ++ A F F+ G ++ ++GL DV N+L++ R G F +
Sbjct: 136 VFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIAR 195
Query: 147 HMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMING 206
+ D+M +R D S+N L+ Y G+ DEA +F ++ + + ++N MI+G
Sbjct: 196 KVLDRM---PVR-DAVSWNSLLSAYLEKGLVDEARALFDEM-----EERNVESWNFMISG 246
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE-FREAGHEP 265
G V A +F ++ R +V+++NA++ NE + ++ ++ +P
Sbjct: 247 YAAAGLVKEAKEVFDSMPVR----DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
+ T +V++ C G L QG + + G +GF +V K G++ +A E+
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF 362
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
D++++N++I G +ALE+ ++ EG + T ++
Sbjct: 363 RATSKR----DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV 418
Query: 386 KRLNEAVQHLDHMNSL-GFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTIL 444
L++A + + M+S+ + C++D LG+ G I+ A + + ++ +IL
Sbjct: 419 GMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEA---SIL 475
Query: 445 VHNLCRA-RRF 454
+ +L A +RF
Sbjct: 476 LESLLGACKRF 486
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 196/456 (42%), Gaps = 64/456 (14%)
Query: 20 PAILNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKF-----LNICIASMCKAKQLDK 74
P H + I ++ FR M+ G K+ L C A+ C ++ +
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKAC-AAFCGFEEGRQ 161
Query: 75 AECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMS 134
+ I K G++ DV NTL++ Y R F+ +VL+RM D +S+NSL+S
Sbjct: 162 IHGLFI---KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMP----VRDAVSWNSLLS 214
Query: 135 GAVRKGLFPMTLHMFDKMIESEIRP---------------------------DVWSYNIL 167
+ KGL +FD+M E + DV S+N +
Sbjct: 215 AYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAM 274
Query: 168 MHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRG 227
+ Y +G +E VF +L + P T +++ G + + + + G
Sbjct: 275 VTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHG 334
Query: 228 FVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGL 287
E AL++ K + ++A L FR A + + T+ ++++ G + L
Sbjct: 335 IEIEGFLATALVDMYSKCGKIDKA---LEVFR-ATSKRDVSTWNSIISDLSVHGLGKDAL 390
Query: 288 EILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS-NGVEPDLASYNTMIYL 346
EI +EM +G+ +G + V++A G + +A ++ E M S VEP + Y M+ L
Sbjct: 391 EIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDL 450
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK-------AKRLNEAVQHLDHMN 399
R G+++EA ELV++I P ++ + G CK A+R+ + L+ +
Sbjct: 451 LGRMGKIEEAEELVNEI----PADEASILLESLLGACKRFGQLEQAERIANRLLELNLRD 506
Query: 400 SLGFG--FNLVASNC----VLDGLG--KAGHIDRAL 427
S G+ NL AS+ V+DG +A ++R+L
Sbjct: 507 SSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRSL 542
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 139/337 (41%), Gaps = 23/337 (6%)
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
M + GL D S + L++ A P T+ ++ P+ +++N ++ Y
Sbjct: 62 MLKTGLFHDTFSASKLVAFAATNPE-PKTVSYAHSILNRIGSPNGFTHNSVIRAYANSST 120
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYN 236
P+ A VF+++LL P ++ ++ + + G V +V N
Sbjct: 121 PEVALTVFREMLL-GPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVEN 179
Query: 237 ALINGLCKARRANEARRLLSEFREAGHEP--NAITFTTVMNCCFRCGRLEQGLEILTEMR 294
L+N ++ AR++L P +A+++ ++++ G +++ + EM
Sbjct: 180 TLVNVYGRSGYFEIARKVLDRM------PVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 295 SKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
+ F +++ G V EA E+ + M D+ S+N M+ Y G +
Sbjct: 234 ERNVESWNF----MISGYAAAGLVKEAKEVFDSMPVR----DVVSWNAMVTAYAHVGCYN 285
Query: 355 EALELVDQI---EKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASN 411
E LE+ +++ E P D +T ++ L++ +++ G +
Sbjct: 286 EVLEVFNKMLDDSTEKP--DGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLAT 343
Query: 412 CVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNL 448
++D K G ID+AL+ F RD T+ ++ +L
Sbjct: 344 ALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDL 380
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 143/311 (45%), Gaps = 17/311 (5%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKL---GVLP-DVVTFNTLIDAYCRFVSFDAGCEVLE 115
NI + + C A ++D A+ + + ++ G+L D T+ T+I + + +V +
Sbjct: 339 NILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKD 398
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
MK G+TP+ +++SL+S GL H+F++M+ S P+ +NIL+H
Sbjct: 399 DMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEAC 458
Query: 176 MPDEANRVFKDVLLSAETDP----------STATYNVMINGLCKNGYVHNALSMFRNLQR 225
D A R+F+ S+ + T++ N++ N + N+ S + +
Sbjct: 459 QYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASK 518
Query: 226 R-GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLE 284
R F P TYN L+ + L+ E + G PN IT++T+++ C G +E
Sbjct: 519 RFCFKPTTATYNILLKAC--GTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVE 576
Query: 285 QGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
+ IL M S G D AY T + + + A + E+M ++P+ +YNT++
Sbjct: 577 GAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLL 636
Query: 345 YLYFRQGRVDE 355
+ G + E
Sbjct: 637 KARSKYGSLLE 647
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 140/354 (39%), Gaps = 68/354 (19%)
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKN-GYVHNALSMFRNLQRRGFVPEVLTYNALI 239
+R + LL P+ N ++N + GY L +++N+Q ++ +YN L+
Sbjct: 286 SRYIYEDLLKENIKPNIYVINSLMNVNSHDLGYT---LKVYKNMQILDVTADMTSYNILL 342
Query: 240 NGLCKARRANEARRLLSEFREAGHEP----NAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
C A R + A+ + E + +A T+ T++ + L++ +M+S
Sbjct: 343 KTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKS 402
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM------------ 343
G T + + ++++A G V +A+ + E+M+++G EP+ +N +
Sbjct: 403 VGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDR 462
Query: 344 ---IYLYFRQGRVDEALELVDQIEK-----------EGPG-------NDQYTH------- 375
++ ++ V+E+L D + K GPG N Y
Sbjct: 463 AFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCF 522
Query: 376 ---TIIIHGLCKA--KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
T + L KA + +D M SLG N + + ++D G +G ++ A++
Sbjct: 523 KPTTATYNILLKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRIL 582
Query: 431 EGMEVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVI 480
M D YT + +CA CL+ F + + RR I
Sbjct: 583 RTMHSAGTRPDVVAYTTAIK--------ICAENK---CLKLAFSLFEEMRRYQI 625
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 156/385 (40%), Gaps = 31/385 (8%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
P++ T+ID + + E + + + P++ NSLM+ V TL +
Sbjct: 265 PNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSLMN--VNSHDLGYTLKV 322
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKD---VLLSAETDPSTATYNVMIN 205
+ M ++ D+ SYNIL+ G D A ++K+ + S TY +I
Sbjct: 323 YKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIK 382
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
AL + +++ G P T+++LI+ A +A L E +G EP
Sbjct: 383 VFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEP 442
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKT---------- 315
N+ F +++ C + ++ + KG + + Y + + +T
Sbjct: 443 NSQCFNILLHACVEACQYDRAFRLFQSW--KGSSVNESLYADDIVSKGRTSSPNILKNNG 500
Query: 316 -GRVVEADEIAEQMMSNG---VEPDLASYNTMIYL----YFRQGRVDEALELVDQIEKEG 367
G +V + + + ++ +P A+YN ++ Y+R G+ EL+D+++ G
Sbjct: 501 PGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYR-GK-----ELMDEMKSLG 554
Query: 368 PGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRAL 427
+Q T + +I + + AV+ L M+S G ++VA + + + A
Sbjct: 555 LSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAF 614
Query: 428 KFFEGMEVRDSFTYTILVHNLCRAR 452
FE M + + L +AR
Sbjct: 615 SLFEEMRRYQIKPNWVTYNTLLKAR 639
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 149/359 (41%), Gaps = 47/359 (13%)
Query: 89 PDVVTFNTLIDAYCR-FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLH 147
P+ +FN +I + +A + RMK +GL PD +YN + + +
Sbjct: 94 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
+ + + + DV + L+ Y + G A ++F ++ T+ T ++N MI+G
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEI-----TERDTVSWNSMISGY 208
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
+ GY +A+ +FR ++ GF EP+
Sbjct: 209 SEAGYAKDAMDLFRKMEEEGF-----------------------------------EPDE 233
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMR-SKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
T +++ C G L G +L EM +K F +++ K G + A +
Sbjct: 234 RTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFN 292
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
QM ++ D ++ MI +Y + G+ EA +L ++EK G D T + ++
Sbjct: 293 QM----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348
Query: 387 RLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILV 445
L Q H + L N+ + ++D GK G ++ AL+ FE M V++ T+ ++
Sbjct: 349 ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMI 407
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 167/376 (44%), Gaps = 23/376 (6%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + K +++ V K+G+ DV ++LI Y + ++ + + E
Sbjct: 136 NFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITE 195
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
D +S+NS++SG G + +F KM E PD + ++ LG
Sbjct: 196 R----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLG-DLR 250
Query: 180 ANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALI 239
R+ +++ ++ + ST + +I+ K G + +A +F + ++ V + A+I
Sbjct: 251 TGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRV----AWTAMI 306
Query: 240 NGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
+ +++EA +L E + G P+A T +TV++ C G LE G +I T
Sbjct: 307 TVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQ 366
Query: 300 FDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALEL 359
+ + +V K GRV EA + E M + A++N MI Y QG EAL L
Sbjct: 367 HNIYVATGLVDMYGKCGRVEEALRVFEAMPVK----NEATWNAMITAYAHQGHAKEALLL 422
Query: 360 VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVAS----NCVLD 415
D++ P +D T ++ A +++ ++ M+S+ F LV ++D
Sbjct: 423 FDRMSV--PPSD-ITFIGVLSACVHAGLVHQGCRYFHEMSSM---FGLVPKIEHYTNIID 476
Query: 416 GLGKAGHIDRALKFFE 431
L +AG +D A +F E
Sbjct: 477 LLSRAGMLDEAWEFME 492
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 135/385 (35%), Gaps = 94/385 (24%)
Query: 34 TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVT 93
T R+ +T +I LST + I+ K LD A V +K D V
Sbjct: 251 TGRLLEEMAITKKI-----GLSTFLGSKLISMYGKCGDLDSARRVFNQMIK----KDRVA 301
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
+ +I Y + ++ M++ G++PD + ++++S G + +
Sbjct: 302 WTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHAS 361
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
E ++ +++ L+ Y + G +EA RVF+ + + E AT+N MI G+
Sbjct: 362 ELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNE-----ATWNAMITAYAHQGHA 416
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
AL +F + VP P+ ITF V
Sbjct: 417 KEALLLFDRMS----VP----------------------------------PSDITFIGV 438
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
++ C G + QG EM S G+
Sbjct: 439 LSACVHAGLVHQGCRYFHEMSSM----------------------------------FGL 464
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR----LN 389
P + Y +I L R G +DEA E +++ PG I G C ++
Sbjct: 465 VPKIEHYTNIIDLLSRAGMLDEAWEFMERF----PGKPDEIMLAAILGACHKRKDVAIRE 520
Query: 390 EAVQHLDHMNSLGFGFNLVASNCVL 414
+A++ L M N V S+ VL
Sbjct: 521 KAMRMLMEMKEAKNAGNYVISSNVL 545
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 51/279 (18%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGV------KLGVLPDVVTFNTLIDAYCRFVSFDAGCE 112
LN C+ S K+ D L++G+ KL + PDV ++NTLI C SF
Sbjct: 148 LNACVNS----KKFD-----LVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVA 198
Query: 113 VLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYF 172
+++ ++ GL PD I++N L+ + KG F ++ +M+E ++ D+ SYN +
Sbjct: 199 LIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLA 258
Query: 173 RLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEV 232
+E +F D L E P T+ MI G G + A++ ++ +++ G P
Sbjct: 259 MENKSEEMVSLF-DKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLK 317
Query: 233 LTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTE 292
+N+L+ +CKA G LE E+ E
Sbjct: 318 FVFNSLLPAICKA-----------------------------------GDLESAYELCKE 342
Query: 293 MRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
+ +K D VV ALVK + EA+EI E +N
Sbjct: 343 IFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTN 381
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 2/272 (0%)
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
+++ Y R+GM + A +VF D + + ++N ++N + +F+ L +
Sbjct: 112 IINLYGRVGMFENAQKVF-DEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGK 170
Query: 227 -GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQ 285
P+V +YN LI GLC EA L+ E G +P+ ITF +++ + G+ E+
Sbjct: 171 LSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEE 230
Query: 286 GLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIY 345
G +I M K D +Y + L + E + +++ N ++PD+ ++ MI
Sbjct: 231 GEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIK 290
Query: 346 LYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGF 405
+ +G++DEA+ +IEK G ++ ++ +CKA L A + + +
Sbjct: 291 GFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLV 350
Query: 406 NLVASNCVLDGLGKAGHIDRALKFFEGMEVRD 437
+ V+D L K D A + E + D
Sbjct: 351 DEAVLQEVVDALVKGSKQDEAEEIVELAKTND 382
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 155/344 (45%), Gaps = 13/344 (3%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA-G 121
I + K KQ +KA + + + G + + + L+ AY R FDA +LERMK +
Sbjct: 157 IVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHN 216
Query: 122 LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
PDV +Y+ L+ ++ F + M IRP+ +YN L+ Y + M E
Sbjct: 217 CQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEME 276
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
+L + P + T N + NG + + + Q G P + T+N L++
Sbjct: 277 STLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDS 336
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
K+ + ++ ++ + +T+ V++ R G L+Q + M+S+
Sbjct: 337 YGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERI--- 393
Query: 302 GFAYCTVVAALVKT-GRVVEADEIAEQMM---SNGVEPDLASYNTMIYLYFRQGRVDEAL 357
F C + +LV+ GR +AD+I + ++ + DL +N ++ Y R + E
Sbjct: 394 -FPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMK 452
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
+++ +EK+G D+ T+ ++ KA R++ H+ ++ +
Sbjct: 453 GVLELMEKKGFKPDKITYRTMV----KAYRISGMTTHVKELHGV 492
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 121/266 (45%), Gaps = 2/266 (0%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSF-DAGCEVLERMK 118
+I I S + DK + +L D + G+ P+ +T+NTLIDAY + F + +++ +
Sbjct: 225 SILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLG 284
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
E PD + NS + G M + ++K S I P++ ++NIL+ Y + G
Sbjct: 285 EDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYK 344
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+ + V + + + TYNV+I+ + G + +FR +Q P +T +L
Sbjct: 345 KMSAVM-EYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSL 403
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
+ +A +A++ +L + + + F +++ R + + +L M KG+
Sbjct: 404 VRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGF 463
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEI 324
D Y T+V A +G E+
Sbjct: 464 KPDKITYRTMVKAYRISGMTTHVKEL 489
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 115/259 (44%), Gaps = 2/259 (0%)
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
P+ Y +I L K A +F+ + G V Y AL++ ++ R + A L
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 255 LSEFREAGH-EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
L + + + +P+ T++ ++ + ++ ++L++MR +G + Y T++ A
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYG 267
Query: 314 KTGRVVEADEIAEQMM-SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ 372
K VE + QM+ + +PD + N+ + + G+++ ++ + G +
Sbjct: 268 KAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNI 327
Query: 373 YTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEG 432
T I++ K+ + +++M + + +V N V+D G+AG + + F
Sbjct: 328 RTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRL 387
Query: 433 MEVRDSFTYTILVHNLCRA 451
M+ F + + +L RA
Sbjct: 388 MQSERIFPSCVTLCSLVRA 406
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 4/238 (1%)
Query: 214 HNALSMFRNLQRR-GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
+A+ +F L+ + + P V Y LI L K ++ +A L E G N +T
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTA 190
Query: 273 VMNCCFRCGRLEQGLEILTEMRSK-GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
+++ R GR + +L M+S D Y ++ + ++ + ++ M
Sbjct: 191 LVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQ 250
Query: 332 GVEPDLASYNTMIYLYFRQGR-VDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
G+ P+ +YNT+I Y + V+ L+ + ++ D +T + ++
Sbjct: 251 GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEM 310
Query: 391 AVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNL 448
+ S G N+ N +LD GK+G+ + E M+ + +++TI+ +N+
Sbjct: 311 MENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQ-KYHYSWTIVTYNV 367
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 159 PDVWSYNILMHCYFRLGMPDEANRVFKDVL-LSAETDPSTATYNVMINGLCKNGYVHNAL 217
P S+N +++ + DE +++F L E D N++I GLC++G + AL
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEID--ACCLNILIKGLCESGNLEAAL 222
Query: 218 SMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCC 277
+ ++ P V+T++ LI G C + EA +LL + EP+ ITF +++
Sbjct: 223 QLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGL 282
Query: 278 FRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDL 337
+ GR+E+G+++L M+ KG + Y V+ L+ R +EA E+ QM+S G+ P
Sbjct: 283 RKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSF 342
Query: 338 ASYNTMI 344
SY M+
Sbjct: 343 LSYKKMV 349
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 1/244 (0%)
Query: 33 LTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVV 92
L RI + + F + G S+K N + + AK D+ + + KLGV D
Sbjct: 144 LAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDAC 203
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
N LI C + +A ++L+ + P+V++++ L+ G KG F + ++M
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
+ I PD ++NIL+ + G +E + + + + +P+ TY ++ GL
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKG-CEPNPGTYQEVLYGLLDKKR 322
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
A M + G P L+Y ++ GLC+ + E +L + G P + +
Sbjct: 323 NLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWK 382
Query: 273 VMNC 276
V+ C
Sbjct: 383 VVQC 386
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%)
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
PS+ ++N ++N L +F + + G + N LI GLC++ A +L
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 255 LSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK 314
L EF + PN +TF+ ++ G+ E+ ++L M + D + +++ L K
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 315 TGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYT 374
GRV E ++ E+M G EP+ +Y ++Y + R EA E++ Q+ G +
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLS 344
Query: 375 HTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
+ ++ GLC+ K + E L M + GF
Sbjct: 345 YKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 1/224 (0%)
Query: 112 EVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCY 171
E+L M + G P S+N +++ V LF +F + + D NIL+
Sbjct: 153 EILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGL 212
Query: 172 FRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE 231
G + A ++ D ++ P+ T++ +I G C G A + +++ P+
Sbjct: 213 CESGNLEAALQLL-DEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPD 271
Query: 232 VLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILT 291
+T+N LI+GL K R E LL + G EPN T+ V+ R + E+++
Sbjct: 272 TITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMS 331
Query: 292 EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
+M S G +Y +V L +T VVE D + QM+++G P
Sbjct: 332 QMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTAT-YNVMINGLCKNGYVHNALSMFRN 222
Y ++++ + + M DE V + + L S YN+M G ++ A+ +
Sbjct: 98 YALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFG 157
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
+ G P ++N ++N L A+ +E ++ + G E +A ++ G
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGN 217
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
LE L++L E + + + ++ G+ EA ++ E+M +EPD ++N
Sbjct: 218 LEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
Query: 343 MIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
+I ++GRV+E ++L+++++ +G + T+ +++GL KR EA + + M S G
Sbjct: 278 LISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWG 337
Query: 403 FGFNLVASNCVLDGL 417
+ ++ ++ GL
Sbjct: 338 MRPSFLSYKKMVLGL 352
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 124/295 (42%), Gaps = 19/295 (6%)
Query: 177 PDEANRVFKDV-----LLSA--------ETDPSTATYNVMINGLCKNGYVHNALSMFR-- 221
P+E ++F +V LL A + P+ + Y +MIN + + R
Sbjct: 62 PNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTI 121
Query: 222 NLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCG 281
L++R E YN + A R N A +L + G P++ +F ++N
Sbjct: 122 KLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAK 181
Query: 282 RLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYN 341
++ +I G D ++ L ++G + A ++ ++ P++ +++
Sbjct: 182 LFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFS 241
Query: 342 TMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
+I + +G+ +EA +L++++EKE D T I+I GL K R+ E + L+ M
Sbjct: 242 PLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVK 301
Query: 402 GFGFNLVASNCVLDGLGKAGHIDRALKFFEGM---EVRDSF-TYTILVHNLCRAR 452
G N VL GL A + M +R SF +Y +V LC +
Sbjct: 302 GCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETK 356
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 113/266 (42%), Gaps = 6/266 (2%)
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR-EAGHEPNAITFTTVMNCCFR-CG 281
+R+ + P Y +IN +A+ +E ++ + E + F +M G
Sbjct: 87 KRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAG 146
Query: 282 RLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYN 341
R+ + +EIL M G ++ ++ LV E +I GVE D N
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 342 TMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
+I G ++ AL+L+D+ ++ + T + +I G C + EA + L+ M
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 402 GFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCRARRFLCA 457
+ + N ++ GL K G ++ + E M+V+ + TY +++ L +R L A
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Query: 458 SKHLVACLQCGFQVLKATRRAVIDGL 483
+ + + G + + + ++ GL
Sbjct: 327 KEMMSQMISWGMRPSFLSYKKMVLGL 352
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 98/186 (52%), Gaps = 14/186 (7%)
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
MF M ES + D YNI++H + G DEA +F ++L+S P TYN+MI
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISG-LQPDVQTYNMMI--- 56
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
+ + A ++ + RRG VP+ +TYN++I+GLCK + +AR++ +
Sbjct: 57 -RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSC 106
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
TF T++N + R++ G+ + EM +G + Y T++ + G A +I ++
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166
Query: 328 MMSNGV 333
M+SNGV
Sbjct: 167 MVSNGV 172
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
M+E+ + D YN ++ G + G F ++F ++ S ++PDV +YN+++ R
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYN 236
A +++ +++ P T TYN MI+GLCK N L+ Q R T+N
Sbjct: 61 LGRAEKLYAEMIRRGLV-PDTITYNSMIHGLCK----QNKLA-----QARKVSKSCSTFN 110
Query: 237 ALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
LING CKA R + L E G N IT+TT+++ + G L+I EM S
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQ---MMSNGV 333
G + ++ L + +A + Q M+SN V
Sbjct: 171 GVYSSSITFRDILPQLCSRKELRKAVAMLLQKSSMVSNNV 210
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D +N +I C+ FD + + +GL PDV +YN + +R ++
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMM----IRFSSLGRAEKLY 68
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
+MI + PD +YN ++H + +A +V K S +T+N +ING CK
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK----------SCSTFNTLINGYCK 118
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
V + +++F + RRG V V+TY LI+G + N A + E G ++IT
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 270 FTTVM 274
F ++
Sbjct: 179 FRDIL 183
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 187 VLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKAR 246
V+ + D TA YN++I+GLCK G A ++F NL G P+V TYN +I +
Sbjct: 4 VMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFS 59
Query: 247 RANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYC 306
A +L +E G P+ IT+ ++++ + +L Q ++ SK + +
Sbjct: 60 SLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV-----SKSCS----TFN 110
Query: 307 TVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE 366
T++ K RV + + +M G+ ++ +Y T+I+ + + G + AL++ ++
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Query: 367 GPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
G + T I+ LC K L +AV L +S+
Sbjct: 171 GVYSSSITFRDILPQLCSRKELRKAVAMLLQKSSM 205
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 13/184 (7%)
Query: 219 MFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCF 278
MF+ ++ + YN +I+GLCKA + +EA + + +G +P+ T+ N
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTY----NMMI 56
Query: 279 RCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLA 338
R L + ++ EM +G D Y +++ L K ++ +A ++++ +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCS 107
Query: 339 SYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM 398
++NT+I Y + RV + + L ++ + G + T+T +IHG + N A+ M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 399 NSLG 402
S G
Sbjct: 168 VSNG 171
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 33/195 (16%)
Query: 293 MRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGR 352
MR D Y ++ L K G+ EA I ++ +G++PD+ +YN MI R
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60
Query: 353 VDEALELVDQIEKEGPGNDQYTHTIIIHGLC--------------------------KAK 386
+ A +L ++ + G D T+ +IHGLC KA
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKAT 120
Query: 387 RLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVH 446
R+ + + M G N++ ++ G + G + AL F+ M ++ +I
Sbjct: 121 RVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFR 180
Query: 447 NLCRARRFLCASKHL 461
++ LC+ K L
Sbjct: 181 DILPQ---LCSRKEL 192
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 168/392 (42%), Gaps = 16/392 (4%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVT-----FNTLIDAYCRFVSFDAGCEVL 114
+I + CK +LD+AE L +LP+ L+DA C F ++L
Sbjct: 255 SILVKKFCKQGKLDEAEDYL-----RALLPNDPAGCGSGLGILVDALCSKRKFQEATKLL 309
Query: 115 ERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE-IRPDVWSYNILMHCYFR 173
+ +K G +YN + ++ G K+ E +V+ YN ++ +
Sbjct: 310 DEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLK 369
Query: 174 LGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
D + ++++ P+ T N + CK G+V AL ++R+ GF P +
Sbjct: 370 ENNLDGVYDILTEMMVRG-VSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAM 428
Query: 234 TYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
+YN LI+ LC +A +L + GH TF+T+ N G+ + E++
Sbjct: 429 SYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAA 488
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
+ A C +++AL G+V +A I E +GV+ + ++IY R
Sbjct: 489 AERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRG 548
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLC--KAKRLNEAVQHLDHMNSLGFGFNLVASN 411
D A +L+ +++++G + + +I +C ++ N L SL + + A N
Sbjct: 549 DIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSL-WEHKVQAYN 607
Query: 412 CVLDGLGKAGHIDRALKFFEGMEVRDSFTYTI 443
++G G AG A ++ M+ RD T T+
Sbjct: 608 LFIEGAGFAGKPKLARLVYDMMD-RDGITPTV 638
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 158/402 (39%), Gaps = 15/402 (3%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
N + + K LD +L + + GV P+ T N + +C+ D E+ E
Sbjct: 361 NSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSE 420
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
G P +SYN L+ + I+ +++ L + G PD
Sbjct: 421 IGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDM 480
Query: 180 ANRVFKDVLLSAETD--PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
A + V+ +AE D P +I+ LC G V +AL + + G + +
Sbjct: 481 AREL---VIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTS 537
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG-LEILTEMRSK 296
LI G R + A +L+ +E G+ P + V+ C E+ L + +
Sbjct: 538 LIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLS 597
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA 356
+ AY + G+ A + + M +G+ P +AS M+ Y + ++ +A
Sbjct: 598 LWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADA 657
Query: 357 LELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDG 416
L + ++G + +I+ GLCKA +L++A+ L+ M G ++ +
Sbjct: 658 LHFFHDLREQGKTKKRLYQVMIV-GLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQK 716
Query: 417 LGKAGHIDRALKFFEGMEVRDS------FTYTILVHNLCRAR 452
L D A+ E R S F +L+HN +++
Sbjct: 717 LCNEEKYDEAVGLVN--EFRKSGRRITAFIGNVLLHNAMKSK 756
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 156/387 (40%), Gaps = 70/387 (18%)
Query: 63 IASMCKAKQLDKAECVLIDGV--KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEA 120
I+++C +++ A ++I+ + K GV F +LI + D +++ RM+E
Sbjct: 504 ISALCDVGKVEDA--LMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEK 561
Query: 121 GLTP------------------------------------DVISYNSLMSGAVRKGLFPM 144
G TP V +YN + GA G +
Sbjct: 562 GYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKL 621
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
++D M I P V S +++ Y + +A F D+ +T Y VMI
Sbjct: 622 ARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKT--KKRLYQVMI 679
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
GLCK + +A+ ++ G P + Y I LC + +EA L++EFR++G
Sbjct: 680 VGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRR 739
Query: 265 PNAITFTTVMNCCFRCG-------RLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGR 317
A +++ + R+ + + EM+S G F +GR
Sbjct: 740 ITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKSLGELIGLF-----------SGR 788
Query: 318 VVEADEIA--EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTH 375
+ E+ ++++ D+ +YN ++ + + ++A E+V++I + G ++ T
Sbjct: 789 IDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIV-MNQAEDAYEMVERIARRGYVPNERTD 847
Query: 376 TIIIHGLCKAKRLNEAVQHLDHMNSLG 402
I+ +R N ++ + ++LG
Sbjct: 848 MIL-------ERANRILEERNSRSNLG 867
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 8/176 (4%)
Query: 281 GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASY 340
GR + L+ MR +G D F Y ++ ALV+ D I +Q+ G + ++
Sbjct: 196 GRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAV-TH 254
Query: 341 NTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNS 400
+ ++ + +QG++DEA + + + P I++ LC ++ EA + LD +
Sbjct: 255 SILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKL 314
Query: 401 LGFGFNLVASNCVLDGLGKAGHIDRALKF------FEGMEVRDSFTYTILVHNLCR 450
+G A N + L KAG ++ F EG E+ + F Y +V L +
Sbjct: 315 VGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCEL-EVFRYNSMVFQLLK 369
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 135/267 (50%), Gaps = 10/267 (3%)
Query: 125 DVISYNSLMSGAVRKGLFPMTLHMFDKMIESE--IRPDVWSYNILMHCYFRLGMPDEA-- 180
D+ +NS++ + T+ +F +++S+ RP ++ IL+ R PD +
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACR--APDSSIS 141
Query: 181 --NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+RV +++++ +P T ++ + LC+ G V A + + L + P+ TYN L
Sbjct: 142 NVHRVL-NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFL 200
Query: 239 INGLCKARRANEARRLLSEFREAGH-EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
+ LCK + + + E R+ +P+ ++FT +++ L + + +++++ + G
Sbjct: 201 LKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
+ D F Y T++ + EA + ++M GVEPD +YNT+I+ + GRV+EA
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 358 ELVDQIEKEGPGNDQYTHTIIIHGLCK 384
+ + G D T+T +++G+C+
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 4/202 (1%)
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
M+ + + PD + +I + G DEA + K+ L + P T TYN ++ LCK
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE-LTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 212 YVHNALSMFRNLQRRGF--VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
+H + F + R F P+++++ LI+ +C ++ EA L+S+ AG +P+
Sbjct: 209 DLH-VVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
+ T+M + + + + +M+ +G D Y T++ L K GRV EA + M+
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 330 SNGVEPDLASYNTMIYLYFRQG 351
G EPD A+Y +++ R+G
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKG 349
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 131/274 (47%), Gaps = 10/274 (3%)
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAET-DPSTATYNVMINGLCKN--- 210
S I D+ +N ++ Y + + ++ ++F+ +L S P +T+ ++++ C+
Sbjct: 79 SRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDS 138
Query: 211 --GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
VH L++ N G P+ +T + + LC+ R +EA+ L+ E E P+
Sbjct: 139 SISNVHRVLNLMVN---NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTY 195
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSK-GYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
T+ ++ +C L E + EMR D ++ ++ + + + EA + +
Sbjct: 196 TYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK 255
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
+ + G +PD YNT++ + + EA+ + ++++EG DQ T+ +I GL KA R
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
+ EA +L M G+ + +++G+ + G
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 61 ICIASMCKA--KQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
I ++ C+A + VL V G+ PD VT + + + C D ++++ +
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES-EIRPDVWSYNILMHCYFRLGMP 177
E PD +YN L+ + + D+M + +++PD+ S+ IL+
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
EA + L +A P YN ++ G C A+ +++ ++ G P+ +TYN
Sbjct: 247 REAMYLVSK-LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCG 281
LI GL KA R EAR L +AG+EP+ T+T++MN R G
Sbjct: 306 LIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
+I + S+C+ ++D+A+ ++ + + PD T+N L+ C+ E ++ M++
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD 222
Query: 120 A-GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
+ PD++S+ L+ +++ K+ + +PD + YN +M + L
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
EA V+K + +P TYN +I GL K G V A + + G+ P+ TY +L
Sbjct: 283 EAVGVYKK-MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 239 INGLCK 244
+NG+C+
Sbjct: 342 MNGMCR 347
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 34 TQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVK--LGVLPDV 91
T R+ +K++ + K T N + +CK K L +D ++ V PD+
Sbjct: 172 TGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL-HVVYEFVDEMRDDFDVKPDL 230
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
V+F LID C + ++ ++ AG PD YN++M G + ++ K
Sbjct: 231 VSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKK 290
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
M E + PD +YN L+ + G +EA R++ ++ A +P TATY ++NG+C+ G
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEA-RMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 122/289 (42%), Gaps = 10/289 (3%)
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTY-NALINGLCKARRANEARRLLSEF--REAGHEP 265
K+ + +A S+F ++ +P L + N+++ N+ +L + P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 266 NAITFTTVMNCCFRC--GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
TF +++ R + +L M + G D V +L +TGRV EA +
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE-GPGNDQYTHTIIIHGL 382
+ +++ PD +YN ++ + + E VD++ + D + TI+I +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DS 438
C +K L EA+ + + + GF + N ++ G A+ ++ M+ D
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 439 FTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDG 487
TY L+ L +A R A +L + G++ AT ++++G+ G
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 153/350 (43%), Gaps = 23/350 (6%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
PD ++N ++ Y R V+F+ +RM D S+N++++G R+G +
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMP----FKDAASWNTMITGYARRGEMEKAREL 177
Query: 149 FDKMIE-SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
F M+E +E+ S+N ++ Y G ++A+ FK + + MI G
Sbjct: 178 FYSMMEKNEV-----SWNAMISGYIECGDLEKASHFFKVAPVRG-----VVAWTAMITGY 227
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
K V A +MF+++ ++T+NA+I+G + R + +L E G PN+
Sbjct: 228 MKAKKVELAEAMFKDMTVN---KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNS 284
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
++ + C L+ G +I + D A ++++ K G + +A ++ E
Sbjct: 285 SGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEV 344
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M + D+ ++N MI Y + G D+AL L ++ D T ++ A
Sbjct: 345 MK----KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGL 400
Query: 388 LNEAVQHLDHM-NSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR 436
+N + + + M C++D LG+AG ++ ALK M R
Sbjct: 401 VNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 147/348 (42%), Gaps = 42/348 (12%)
Query: 126 VISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFK 185
+ N +++ VR G L +F M + ++N L+ +G+ + +R+ +
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLL-----IGISKDPSRMME 111
Query: 186 DVLLSAE-TDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCK 244
L E +P T +YN+M++ +N A S F + + + ++N +I G +
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYAR 167
Query: 245 ARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFA 304
+AR L E N +++ +++ CG LE+ +G A
Sbjct: 168 RGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV----A 219
Query: 305 YCTVVAALVKTGRVVEADEIAEQMMSN-GVEPDLASYNTMIYLYFRQGRVDEALELVDQI 363
+ ++ +K +V E+AE M + V +L ++N MI Y R ++ L+L +
Sbjct: 220 WTAMITGYMKAKKV----ELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM 275
Query: 364 EKEG--PGNDQYTHTII----IHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
+EG P + + ++ + L +++++ V N + +L++ C
Sbjct: 276 LEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYC----- 330
Query: 418 GKAGHIDRALKFFEGMEVRDSFTYTILVHNLCR---ARRFLCASKHLV 462
K G + A K FE M+ +D + ++ + A + LC + ++
Sbjct: 331 -KCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI 377
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 97/220 (44%), Gaps = 9/220 (4%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
DV +LI YC+ ++ E MK+ DV+++N+++SG + G L +F
Sbjct: 318 DVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLF 373
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
+MI+++IRPD ++ ++ G+ + F+ ++ + +P Y M++ L +
Sbjct: 374 REMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGR 433
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
G + AL + R++ F P + L+ G C+ + E +E + NA
Sbjct: 434 AGKLEEALKLIRSMP---FRPHAAVFGTLL-GACRVHKNVELAEFAAEKLLQLNSQNAAG 489
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMR-SKGYTFDGFAYCTV 308
+ + N R E + M+ S G+++ +
Sbjct: 490 YVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEI 529
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 277 CFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK-TGRVVEADEIAEQMMSNGVEP 335
C R G ++ L + MR+K + + +++ + K R++EA ++ +++ EP
Sbjct: 71 CVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFDEI----PEP 122
Query: 336 DLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHL 395
D SYN M+ Y R ++A D++ P D + +I G + + +A +
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRM----PFKDAASWNTMITGYARRGEMEKARELF 178
Query: 396 DHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFL 455
M N V+ N ++ G + G +++A FF+ VR +T ++ +A++
Sbjct: 179 YSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKK-- 232
Query: 456 CASKHLVACLQCGFQVLKATRRAVI-DGLISDGLKNEAKKVRLKIRKAQL 504
V + F+ + + V + +IS ++N + LK+ +A L
Sbjct: 233 ------VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAML 276
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 172/385 (44%), Gaps = 25/385 (6%)
Query: 56 TKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLE 115
TKFL+ CI+S + L A+ ++ DG PD +N +I + + + +
Sbjct: 50 TKFLSFCISS-TSSDFLPYAQ-IVFDGFDR---PDTFLWNLMIRGFSCSDEPERSLLLYQ 104
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
RM + + ++ SL+ F T + ++ + DV++ N L++ Y G
Sbjct: 105 RMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTG 164
Query: 176 MPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTY 235
A+ +F + +P ++N +I G K G + AL++FR + + +++
Sbjct: 165 NFKLAHLLFDRI-----PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKN----AISW 215
Query: 236 NALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
+I+G +A EA +L E + + EP+ ++ ++ C + G LEQG I + +
Sbjct: 216 TTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK 275
Query: 296 KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDE 355
D C ++ K G + EA E+ + + V+ ++ +I Y G E
Sbjct: 276 TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ----AWTALISGYAYHGHGRE 331
Query: 356 ALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVAS----N 411
A+ +++K G + T T ++ C L E + + S+ +NL +
Sbjct: 332 AISKFMEMQKMGIKPNVITFTAVLTA-CSYTGLVEEGKLI--FYSMERDYNLKPTIEHYG 388
Query: 412 CVLDGLGKAGHIDRALKFFEGMEVR 436
C++D LG+AG +D A +F + M ++
Sbjct: 389 CIVDLLGRAGLLDEAKRFIQEMPLK 413
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 166/363 (45%), Gaps = 16/363 (4%)
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
L +FD M ++P+ + N + C R G +A VF+ + + + + TY++M+
Sbjct: 127 LELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFE--FMRKKENVTGHTYSLMLK 184
Query: 206 GLCKNGYVHNALSMFRNLQR---RGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+ + +AL MFR L+R R +V+ YN I+ + E R+ + G
Sbjct: 185 AVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDG 244
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
H IT++ +++ RCGR E L++ EM + + A +++A K + A
Sbjct: 245 HIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLAL 304
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+I + M+ G++P+L + NT+I + G+V ++ ++ G D+YT ++ L
Sbjct: 305 KIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTAL 364
Query: 383 CKAKRLNEAVQHLDHMNSLGF-GFNLVASNCVLDGLGKAGHIDRALKFFEGME----VRD 437
KA R + +Q D + S N N + K G+ ++A+K ME
Sbjct: 365 YKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVS 424
Query: 438 SFTYTILVHNLCRARR---FLCASKHLVA--CLQCGFQVLKATRRAVIDGLISDGLKNEA 492
+ +Y +++ ++R+ L +H+ C F L R+ I G + D +++
Sbjct: 425 TSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLV-RSCIWGSLWDEVEDIL 483
Query: 493 KKV 495
KKV
Sbjct: 484 KKV 486
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 11/317 (3%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
DVV +NT I R + + MK G I+Y+ L+S VR G + L ++
Sbjct: 213 DVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVY 272
Query: 150 DKMIESEI--RPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
D+M+ ++I R D Y ++ C + D A ++F+ +L P+ N +IN L
Sbjct: 273 DEMVNNKISLREDA-MYAMISACT-KEEKWDLALKIFQS-MLKKGMKPNLVACNTLINSL 329
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR-EAGHEPN 266
K G V ++ L+ G P+ T+NAL+ L KA R + +L R E N
Sbjct: 330 GKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLN 389
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
+ T M C + G E+ +++L EM G T +Y V++A K+ + A + E
Sbjct: 390 EYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYE 449
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
M +P+ +Y +++ DE +++ ++E D + IHG+C +
Sbjct: 450 HMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEP-----DVSLYNAAIHGMCLRR 504
Query: 387 RLNEAVQHLDHMNSLGF 403
A + M +G
Sbjct: 505 EFKFAKELYVKMREMGL 521
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 34/239 (14%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
I++ K ++ D A + +K G+ P++V NTLI++ + +V +K G
Sbjct: 291 ISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGH 350
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE--IRPDVWSYNILMHCYFRLGMPDEA 180
PD ++N+L++ + + L +FD MI SE + + YN M +LG ++A
Sbjct: 351 KPDEYTWNALLTALYKANRYEDVLQLFD-MIRSENLCCLNEYLYNTAMVSCQKLGYWEKA 409
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTY----- 235
++ ++ S T ST++YN++I+ K+ AL ++ ++ +R P TY
Sbjct: 410 VKLLYEMEGSGLT-VSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVR 468
Query: 236 -------------------------NALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
NA I+G+C R A+ L + RE G EP+ T
Sbjct: 469 SCIWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKT 527
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/240 (17%), Positives = 103/240 (42%), Gaps = 5/240 (2%)
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
+I A + +D ++ + M + G+ P++++ N+L++ + G + ++ +
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
+PD +++N L+ ++ ++ ++F + + YN + K GY A
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKA 409
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC 276
+ + ++ G +YN +I+ K+R++ A + + +PN T+ +++
Sbjct: 410 VKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS 469
Query: 277 CFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPD 336
C ++ +IL ++ D Y + + A E+ +M G+EPD
Sbjct: 470 CIWGSLWDEVEDILKKVEP-----DVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPD 524
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
+NT + + + ++ ++L M+ +GLT SYN ++S + + L +++ M
Sbjct: 393 YNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMA 452
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
+ + +P+ ++Y L+ + DE + K V +P + YN I+G+C
Sbjct: 453 QRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKV------EPDVSLYNAAIHGMCLRREF 506
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARR 247
A ++ ++ G P+ T ++ L K ++
Sbjct: 507 KFAKELYVKMREMGLEPDGKTRAMMLQNLKKHQK 540
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 151/355 (42%), Gaps = 6/355 (1%)
Query: 10 HFNAAYPFTHPAILNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKA 69
H + F P + + + RI + V F+I S LN + + +
Sbjct: 97 HLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRK 156
Query: 70 KQ-LDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVIS 128
+Q L+ +L+ ++GV + TF LIDA CR D E++ M + + D
Sbjct: 157 RQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRL 216
Query: 129 YNSLMSGAVR---KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFK 185
Y+ L+S + F + ++ D + ++ P + Y ++M G E V
Sbjct: 217 YSRLLSSVCKHKDSSCFDVIGYLED-LRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLN 275
Query: 186 DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKA 245
+ +P Y +++ G+ + A +F L G P+V TYN INGLCK
Sbjct: 276 Q-MKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQ 334
Query: 246 RRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAY 305
A +++S + G EPN +T+ ++ + G L + + EM + G + +
Sbjct: 335 NDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTF 394
Query: 306 CTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
+++A ++ VV A + E+ + V + +I +G +D+A+EL+
Sbjct: 395 DIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELL 449
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 39/300 (13%)
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
+T+ ++I+ LC+ G V A + R + + + + Y+ L++ +CK + ++
Sbjct: 180 STFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSS-------- 231
Query: 258 FREAGHEPNAITFTTVMNCCFRC-GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
CF G LE ++R ++ Y V+ LV+ G
Sbjct: 232 -------------------CFDVIGYLE-------DLRKTRFSPGLRDYTVVMRFLVEGG 265
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHT 376
R E + QM + VEPDL Y ++ +A +L D++ G D YT+
Sbjct: 266 RGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYN 325
Query: 377 IIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEV- 435
+ I+GLCK + A++ + MN LG N+V N ++ L KAG + RA ++ ME
Sbjct: 326 VYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETN 385
Query: 436 ---RDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEA 492
R+S T+ I++ +CA L V + VI L GL ++A
Sbjct: 386 GVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQA 445
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 168/372 (45%), Gaps = 25/372 (6%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G P + N LI+ Y +F + ++ ++M + +VIS+ +++S + +
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKA 146
Query: 146 LHMFDKMIESEIRPDVWSYN-ILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
L + M+ +RP+V++Y+ +L C GM D R+ ++ + + +I
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCN---GMSDV--RMLHCGIIKEGLESDVFVRSALI 201
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
+ K G +ALS+F + + + +N++I G + R++ A L + AG
Sbjct: 202 DVFAKLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
T T+V+ C LE G++ + Y D +V K G + +A +
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQ--AHVHIVKYDQDLILNNALVDMYCKCGSLEDALRV 315
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
QM E D+ +++TMI + G EAL+L ++++ G + T ++
Sbjct: 316 FNQMK----ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSH 371
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASN--CVLDGLGKAGHIDRALKFFEGMEVR-DSFTY 441
A L + + M L +G + V + C++D LGKAG +D A+K ME D+ T+
Sbjct: 372 AGLLEDGWYYFRSMKKL-YGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTW 430
Query: 442 TILVHNLCRARR 453
L+ CR +R
Sbjct: 431 RTLL-GACRVQR 441
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 27/269 (10%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
+K G+ DV + LID + + + V + M +T D I +NS++ G +
Sbjct: 186 IKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRS 241
Query: 143 PMTLHMFDKMIESE-IRPDVWSYNILMHC----YFRLGMPDEANRVFKDVLLSAETDPST 197
+ L +F +M + I ++L C LGM + V + D
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--------KYDQDL 293
Query: 198 ATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSE 257
N +++ CK G + +AL +F ++ R +V+T++ +I+GL + + EA +L
Sbjct: 294 ILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKLFER 349
Query: 258 FREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFA--YCTVVAALVKT 315
+ +G +PN IT V+ C G LE G M+ K Y D Y ++ L K
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK-KLYGIDPVREHYGCMIDLLGKA 408
Query: 316 GRVVEADEIAEQMMSNGVEPDLASYNTMI 344
G++ +A ++ +M EPD ++ T++
Sbjct: 409 GKLDDAVKLLNEM---ECEPDAVTWRTLL 434
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 44/319 (13%)
Query: 166 ILMHCYFRLGMPDEANRVFK--DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
+L+ + RL + R K D L S +ATY+ +I N VH + R+L
Sbjct: 28 LLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHL 87
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
G P + N LIN K N+A +L + + N I++TT+++ +C
Sbjct: 88 YFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIH 143
Query: 284 EQGLEILTEM-----RSKGYTF---------------------------DGFAYCTVVAA 311
++ LE+L M R YT+ D F ++
Sbjct: 144 QKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDV 203
Query: 312 LVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGND 371
K G +A + ++M++ D +N++I + + R D ALEL ++++ G +
Sbjct: 204 FAKLGEPEDALSVFDEMVTG----DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 259
Query: 372 QYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE 431
Q T T ++ L +Q H++ + + +L+ +N ++D K G ++ AL+ F
Sbjct: 260 QATLTSVLRACTGLALLELGMQA--HVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFN 317
Query: 432 GMEVRDSFTYTILVHNLCR 450
M+ RD T++ ++ L +
Sbjct: 318 QMKERDVITWSTMISGLAQ 336
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 143/324 (44%), Gaps = 21/324 (6%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
VK G +V + L+D Y R+ D V + ++ + + +S+N+L++G R+
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE----SRNDVSWNALIAGHARRSGT 243
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
L +F M+ RP +SY L G ++ V ++ S E + A N
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-NT 302
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+++ K+G +H+A +F L +R +V+++N+L+ + EA E R G
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
PN I+F +V+ C G L++G M+ G + + Y TVV L + G + A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDE----ALELVDQIEKEGPGNDQYTHTII 378
E+M +EP A + ++ R + E A E V +++ + PG H I+
Sbjct: 419 RFIEEM---PIEPTAAIWKALLNA-CRMHKNTELGAYAAEHVFELDPDDPG----PHVIL 470
Query: 379 IHGLCKAKRLNEAVQHLDHMNSLG 402
+ R N+A + M G
Sbjct: 471 YNIYASGGRWNDAARVRKKMKESG 494
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 161/366 (43%), Gaps = 17/366 (4%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D+V NTL++ Y + S + +V E+M + D +++ +L+SG + L F
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFF 149
Query: 150 DKMIESEIRPDVWSYNILMHCYF--RLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
++M+ P+ ++ + ++ R G + D + + +++
Sbjct: 150 NQMLRFGYSPNEFTLSSVIKAAAAERRGC---CGHQLHGFCVKCGFDSNVHVGSALLDLY 206
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
+ G + +A +F L+ R V ++NALI G + +A L G P+
Sbjct: 207 TRYGLMDDAQLVFDALESRNDV----SWNALIAGHARRSGTEKALELFQGMLRDGFRPSH 262
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
++ ++ C G LEQG + M G FA T++ K+G + +A +I ++
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
+ + D+ S+N+++ Y + G EA+ +++ + G ++ + ++ +
Sbjct: 323 L----AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHN 447
L+E + + M G V+D LG+AG ++RAL+F E M + + + N
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
Query: 448 LCRARR 453
CR +
Sbjct: 439 ACRMHK 444
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 160/404 (39%), Gaps = 46/404 (11%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTP-DVISYNSLMSGAVRKGLF 142
+L LP V+ ++ D +F S D E P D YN+L+ L
Sbjct: 18 RLNSLPAPVSEDSE-DESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLL 76
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
+ +++S R D+ N L++ Y + G +EA +VF+ + T+
Sbjct: 77 IQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM-----PQRDFVTWTT 131
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+I+G ++ +AL F + R G+ P T +++I RR +L + G
Sbjct: 132 LISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 191
Query: 263 HEPNAITFTTVMNCCFRCGRL-------------------------------EQGLEILT 291
+ N + +++ R G + E+ LE+
Sbjct: 192 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQ 251
Query: 292 EMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG 351
M G+ F+Y ++ A TG + + + M+ +G + + NT++ +Y + G
Sbjct: 252 GMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG 311
Query: 352 RVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASN 411
+ +A ++ D++ K D + ++ + EAV + M +G N ++
Sbjct: 312 SIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFL 367
Query: 412 CVLDGLGKAGHIDRALKFFEGME----VRDSFTYTILVHNLCRA 451
VL +G +D ++E M+ V +++ Y +V L RA
Sbjct: 368 SVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRA 411
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 173/414 (41%), Gaps = 59/414 (14%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLG-VLPDVVTFNTLIDAYCRFVSFDAGCEVLER-M 117
N IA+M +AK+ ++ + K ++P+VV++N +I+A+C + D EV +
Sbjct: 184 NAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHIL 243
Query: 118 KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMP 177
A P ++Y L G V+ G + +M+ D YN L+ Y LG
Sbjct: 244 ANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDF 303
Query: 178 DEANRVFKDVLLSAETDPSTATYNVMING-----LCKNGYVHNALSMFRNLQRRGFVPEV 232
D+A F D L S T Y+ ++N + G A+ +R+L + F
Sbjct: 304 DKAVEFF-DELKSKCT-----VYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHP 357
Query: 233 LTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT-----VMNCCFRCGRLEQGL 287
T N L+ K + +EA L +E + PN ++ + ++N CF+ G + +
Sbjct: 358 PTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAI 417
Query: 288 ----EILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
++ +++ SK + D YC +V + G + EA+ + +S + D S+ M
Sbjct: 418 NTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAM 477
Query: 344 IYLYFRQGRVDEALELVDQI------------------------------------EKEG 367
I Y + R+D+A++++D++ E+E
Sbjct: 478 IDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGERE- 536
Query: 368 PGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
P D + +++ GLC L++A + M G V +++ KAG
Sbjct: 537 PKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAG 590
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 145/346 (41%), Gaps = 10/346 (2%)
Query: 98 IDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI-ESE 156
+ + R DA ++ + + P V + N++++ R + ++ +F +S
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
I P+V SYN +++ + G DEA V++ +L +A PS+ TY + GL + G + +A
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC 276
S+ R + +G + YN LI G ++A E + + I T M
Sbjct: 272 ASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEY 331
Query: 277 CFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPD 336
F G ++ +E + K + ++ +K G+ EA + +M+ N P+
Sbjct: 332 WFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPN 391
Query: 337 LASYNT-----MIYLYFRQGRVDEALELVDQIEKEGPGN----DQYTHTIIIHGLCKAKR 387
+ S N+ M+ F+ G EA+ ++ + D + I+ C+
Sbjct: 392 ILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGM 451
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
L EA + S + + ++D KA ID A+K + M
Sbjct: 452 LTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRM 497
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 145/361 (40%), Gaps = 30/361 (8%)
Query: 42 NVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAY 101
+VT+R + KG + +A ++ A +L + + G D +N LI Y
Sbjct: 252 SVTYRHLTKG--------------LVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY 297
Query: 102 CRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDV 161
FD E + +K D I + M KG + + +++ + R
Sbjct: 298 LDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHP 357
Query: 162 WSYNILMHCYFRLGMPDEANRVFKDVL--------LSAETDPSTATYNVMINGLCKNGYV 213
+ N+L+ + + G DEA +F ++L LS +D T +M+N K G
Sbjct: 358 PTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSD----TVGIMVNECFKMGEF 413
Query: 214 HNALSMFR----NLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
A++ F+ + + FV + L Y ++ C+ EA R +E +A +
Sbjct: 414 SEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPS 473
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
+++ + R++ +++L M V L+K G++ E+ E+ +M
Sbjct: 474 HRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMG 533
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
+PD + Y+ ++ +D+A ++V ++ + G II KA R
Sbjct: 534 EREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAGRRE 593
Query: 390 E 390
E
Sbjct: 594 E 594
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMM-SNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
F ++AA+ + R E+ + + + + P++ SYN +I + +G VDEALE+
Sbjct: 181 FTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYR 240
Query: 362 QIEKEGP-GNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
I P T+ + GL +A R+ +A L M S G + N ++ G
Sbjct: 241 HILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDL 300
Query: 421 GHIDRALKFFEGMEVR 436
G D+A++FF+ ++ +
Sbjct: 301 GDFDKAVEFFDELKSK 316
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 142/332 (42%), Gaps = 12/332 (3%)
Query: 45 FRIMVKGRSL--STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYC 102
FR M K R + I+ M K Q A + + G PD +N LI A+
Sbjct: 120 FRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL 179
Query: 103 RFVSFDAGCE----VLERMKEAGL---TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
E L++MK G+ P+V++YN L+ + G +F + S
Sbjct: 180 HTRDKAKALEKVRGYLDKMK--GIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN 215
+ PDV+++N +M Y + GM E V + S E P T+NV+I+ K
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTR-MRSNECKPDIITFNVLIDSYGKKQEFEK 296
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
F++L R P + T+N++I KAR ++A + + + + P+ IT+ ++
Sbjct: 297 MEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIM 356
Query: 276 CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
CG + + EI E+ ++ + G +EAD++ + V P
Sbjct: 357 MYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHP 416
Query: 336 DLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
D ++Y + Y + ++ L+ ++EK+G
Sbjct: 417 DASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 34/245 (13%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI + + ++ ++D+ + D V PDV TFN ++DAY + VL RM+
Sbjct: 212 NILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRS 271
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
PD+I++N L+ +K F F ++ S+ +P + ++N ++ Y + M D+
Sbjct: 272 NECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK 331
Query: 180 ANRVFKD----------------VLLSA----------------ETDP--STATYNVMIN 205
A VFK +++ E+D +T N M+
Sbjct: 332 AEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLE 391
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
C+NG A +F N P+ TY L KA + + L+ + + G P
Sbjct: 392 VYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVP 451
Query: 266 NAITF 270
N F
Sbjct: 452 NKRFF 456
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 134/312 (42%), Gaps = 26/312 (8%)
Query: 202 VMINGLCKNGYVHNALSMFRNLQR-RGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
++ L K+ L +FR +Q+ R ++P+ Y+ LI+ + K + A L SE +
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY--TFDGFAYCT--------VVA 310
+G P+A + ++ + LE + +GY G C ++
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALE-----KVRGYLDKMKGIERCQPNVVTYNILLR 216
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
A ++G+V + + + + + + V PD+ ++N ++ Y + G + E ++ ++
Sbjct: 217 AFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKP 276
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
D T ++I K + + Q + L N ++ GKA ID+A F
Sbjct: 277 DIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 431 EGME----VRDSFTYT--ILVHNLCRARRFLCASKHLVACLQCGFQVLKA-TRRAVIDGL 483
+ M + TY I+++ C + + ++ + + +VLKA T A+++
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGS---VSRAREIFEEVGESDRVLKASTLNAMLEVY 393
Query: 484 ISDGLKNEAKKV 495
+GL EA K+
Sbjct: 394 CRNGLYIEADKL 405
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 142/332 (42%), Gaps = 12/332 (3%)
Query: 45 FRIMVKGRSL--STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYC 102
FR M K R + I+ M K Q A + + G PD +N LI A+
Sbjct: 120 FRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL 179
Query: 103 RFVSFDAGCE----VLERMKEAGL---TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
E L++MK G+ P+V++YN L+ + G +F + S
Sbjct: 180 HTRDKAKALEKVRGYLDKMK--GIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN 215
+ PDV+++N +M Y + GM E V + S E P T+NV+I+ K
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTR-MRSNECKPDIITFNVLIDSYGKKQEFEK 296
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
F++L R P + T+N++I KAR ++A + + + + P+ IT+ ++
Sbjct: 297 MEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIM 356
Query: 276 CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
CG + + EI E+ ++ + G +EAD++ + V P
Sbjct: 357 MYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHP 416
Query: 336 DLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
D ++Y + Y + ++ L+ ++EK+G
Sbjct: 417 DASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 97/246 (39%), Gaps = 36/246 (14%)
Query: 60 NICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE 119
NI + + ++ ++D+ + D V PDV TFN ++DAY + VL RM+
Sbjct: 212 NILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRS 271
Query: 120 AGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDE 179
PD+I++N L+ +K F F ++ S+ +P + ++N ++ Y + M D+
Sbjct: 272 NECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK 331
Query: 180 ANRVFKDVLLSAETDPSTATY-----------------------------------NVMI 204
A VFK + PS TY N M+
Sbjct: 332 AEWVFKK-MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAML 390
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
C+NG A +F N P+ TY L KA + + L+ + + G
Sbjct: 391 EVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIV 450
Query: 265 PNAITF 270
PN F
Sbjct: 451 PNKRFF 456
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 134/312 (42%), Gaps = 26/312 (8%)
Query: 202 VMINGLCKNGYVHNALSMFRNLQR-RGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
++ L K+ L +FR +Q+ R ++P+ Y+ LI+ + K + A L SE +
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY--TFDGFAYCT--------VVA 310
+G P+A + ++ + LE + +GY G C ++
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALE-----KVRGYLDKMKGIERCQPNVVTYNILLR 216
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
A ++G+V + + + + + + V PD+ ++N ++ Y + G + E ++ ++
Sbjct: 217 AFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKP 276
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
D T ++I K + + Q + L N ++ GKA ID+A F
Sbjct: 277 DIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 431 EGME----VRDSFTYT--ILVHNLCRARRFLCASKHLVACLQCGFQVLKA-TRRAVIDGL 483
+ M + TY I+++ C + + ++ + + +VLKA T A+++
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGS---VSRAREIFEEVGESDRVLKASTLNAMLEVY 393
Query: 484 ISDGLKNEAKKV 495
+GL EA K+
Sbjct: 394 CRNGLYIEADKL 405
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 173/413 (41%), Gaps = 14/413 (3%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRK-GLFPMTLH 147
PDVV +N +I + + G + M + G+TPD ++ L++G R G
Sbjct: 97 PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK 156
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
+ +++ + +++ N L+ Y G+ D A VF ++N+MI+G
Sbjct: 157 LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVF-----DRRCKEDVFSWNLMISGY 211
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
+ ++ + ++R P +T +++ K + + +R+ E EP+
Sbjct: 212 NRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
++N CG ++ + I M+++ D ++ ++V V+ G + A +Q
Sbjct: 272 RLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M D S+ MI Y R G +E+LE+ +++ G D++T ++
Sbjct: 328 MPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHN 447
L +++ ++V N ++D K G ++A K F M+ RD FT+T +V
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVG 443
Query: 448 LCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIR 500
L + A K Q T V+ G+ ++A+K K+R
Sbjct: 444 LANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMR 496
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 165/368 (44%), Gaps = 20/368 (5%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERM-KEAGLTPDVISYNSLMSGAVRKGL 141
VK G+ ++ N L+ Y D V +R KE DV S+N ++SG R
Sbjct: 162 VKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE-----DVFSWNLMISGYNRMKE 216
Query: 142 FPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYN 201
+ ++ + +M + + P + +++ ++ D RV + + +T+PS N
Sbjct: 217 YEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV-HEYVSECKTEPSLRLEN 275
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
++N G + A+ +FR+++ R +V+++ +++ G + AR +
Sbjct: 276 ALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
+ I++T +++ R G + LEI EM+S G D F +V+ A G +
Sbjct: 332 ----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHG 381
+ I + N ++ D+ N +I +YF+ G ++A ++ +++ D++T T ++ G
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR----DKFTWTAMVVG 443
Query: 382 LCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTY 441
L + EA++ M + + + VL +G +D+A KFF M D
Sbjct: 444 LANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMR-SDHRIE 502
Query: 442 TILVHNLC 449
LVH C
Sbjct: 503 PSLVHYGC 510
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 10/197 (5%)
Query: 45 FRIMVKGRSLSTKFLNICIASMCK-AKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCR 103
FR M + +F + + + C L+ E + K + DVV N LID Y
Sbjct: 356 FREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMY-- 413
Query: 104 FVSFDAGC-EVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVW 162
F GC E +++ D ++ +++ G G + +F +M + I+PD
Sbjct: 414 ---FKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDI 470
Query: 163 SYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRN 222
+Y ++ GM D+A + F + +PS Y M++ L + G V A + R
Sbjct: 471 TYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRK 530
Query: 223 LQRRGFVPEVLTYNALI 239
+ P + + AL+
Sbjct: 531 MPMN---PNSIVWGALL 544
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 154/335 (45%), Gaps = 13/335 (3%)
Query: 55 STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVL 114
S+K L++ K L + + V + LG+ DVV +LI+ Y F D C
Sbjct: 3 SSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVY--FTCKDH-CSAR 59
Query: 115 ERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEI-RPDVWSYNILMHCYFR 173
+ + DV +NSLMSG + +F TL +F +++ I PD +++ ++ Y
Sbjct: 60 HVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGA 119
Query: 174 LGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
LG + R+ +++ + + ++ K N+L +F + R +V
Sbjct: 120 LGR-EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER----DVA 174
Query: 234 TYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
++N +I+ ++ A +A L +G EPN+++ T ++ C R LE+G EI +
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC 234
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
KG+ D + V +ALV + E+A ++ L ++N+MI Y +G
Sbjct: 235 VKKGFELDEY----VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDS 290
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
+E+++++ EG Q T T I+ +++ L
Sbjct: 291 KSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 173/441 (39%), Gaps = 78/441 (17%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
VK G + DVV ++L+ Y +F F+ +V + M E DV S+N+++S + G
Sbjct: 134 VKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER----DVASWNTVISCFYQSGEA 189
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSA-ETDPSTATYN 201
L +F +M S P+ S + + RL + + + + E D +
Sbjct: 190 EKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSAL 249
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
V + G C V A +F+ + R+ V +N++I G + +L+
Sbjct: 250 VDMYGKCDCLEV--AREVFQKMPRKSLV----AWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 262 GHEPNAITFTTVMNCCFRC-----GRLEQGLEILTEMRSKGYT----FDGFAYC------ 306
G P+ T T+++ C R G+ G I + + + Y D + C
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA 363
Query: 307 ----------------TVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM------- 343
++++ + G +A E+ +QM+S GV+PD+ ++ ++
Sbjct: 364 ETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQL 423
Query: 344 --------IYLYFRQGRV--DEAL--ELVDQIEKEG------------PGNDQYTHTIII 379
I+L + R+ DE L L+D K G P D + T++I
Sbjct: 424 AALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMI 483
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSF 439
+ EA+ D M G + V VL G AG ID LKFF M +
Sbjct: 484 SAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGI 543
Query: 440 T-----YTILVHNLCRARRFL 455
Y+ ++ L RA R L
Sbjct: 544 EPIIEHYSCMIDILGRAGRLL 564
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 165/390 (42%), Gaps = 24/390 (6%)
Query: 51 GRSLSTKF------LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRF 104
GR S+ F L + I++ + L++ + + VK G D + L+D Y +
Sbjct: 197 GRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC 256
Query: 105 VSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY 164
+ EV ++M L +++NS++ G V KG + + ++MI RP +
Sbjct: 257 DCLEVAREVFQKMPRKSL----VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTL 312
Query: 165 -NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
+ILM C + + ++ + + +I+ K G + A ++F
Sbjct: 313 TSILMACSRSRNLLH--GKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKT 370
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
Q+ V E ++N +I+ +A + + G +P+ +TFT+V+ C + L
Sbjct: 371 QKD--VAE--SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 284 EQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTM 343
E+G +I + D ++ K G EA I + + D+ S+ M
Sbjct: 427 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI----PKKDVVSWTVM 482
Query: 344 IYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGF 403
I Y G+ EAL D+++K G D T ++ A ++E ++ M S +
Sbjct: 483 ISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRS-KY 541
Query: 404 GFNLVAS--NCVLDGLGKAGHIDRALKFFE 431
G + +C++D LG+AG + A + +
Sbjct: 542 GIEPIIEHYSCMIDILGRAGRLLEAYEIIQ 571
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 123/305 (40%), Gaps = 39/305 (12%)
Query: 91 VVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFD 150
+V +N++I Y + E+L RM G P + S++ R +
Sbjct: 274 LVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHG 333
Query: 151 KMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTA-TYNVMINGLCK 209
+I S + D++ L+ YF+ G + A VF ++T A ++NVMI+
Sbjct: 334 YVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF------SKTQKDVAESWNVMISSYIS 387
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
G A+ ++ + G P+V+T+ +++ + + +++ E+ E + +
Sbjct: 388 VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELL 447
Query: 270 FTTVMNCCFRCGRLEQGLEILT-------------------------------EMRSKGY 298
+ +++ +CG ++ I EM+ G
Sbjct: 448 LSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGL 507
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN-GVEPDLASYNTMIYLYFRQGRVDEAL 357
DG V++A G + E + QM S G+EP + Y+ MI + R GR+ EA
Sbjct: 508 KPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAY 567
Query: 358 ELVDQ 362
E++ Q
Sbjct: 568 EIIQQ 572
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 138/298 (46%), Gaps = 16/298 (5%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFV 105
R++++G S L + + +++ L + + ++ V D+ +LID Y
Sbjct: 299 RMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLY---- 354
Query: 106 SFDAGCEVLERMKEAGLTPDVI-SYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY 164
F G L + DV S+N ++S + G + + ++D+M+ ++PDV ++
Sbjct: 355 -FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Query: 165 NILMHCYFRLGMPDEANRVFKDVLLS-AETDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
++ +L ++ ++ + S ETD + +++ K G A +F ++
Sbjct: 414 TSVLPACSQLAALEKGKQIHLSISESRLETDE--LLLSALLDMYSKCGNEKEAFRIFNSI 471
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
++ +V+++ +I+ + EA E ++ G +P+ +T V++ C G +
Sbjct: 472 PKK----DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLI 527
Query: 284 EQGLEILTEMRSKGYTFDGFA--YCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLAS 339
++GL+ ++MRSK Y + Y ++ L + GR++EA EI +Q +L S
Sbjct: 528 DEGLKFFSQMRSK-YGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLS 584
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 157/378 (41%), Gaps = 38/378 (10%)
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
+ F+ L+ Y + + G +V +R+ + G T VI+ N+L+ + + + + +++
Sbjct: 165 LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYEC 224
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEAN-----------------------RVFKDV- 187
I+ I P+ + I++ + G E RV +++
Sbjct: 225 AIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMR 284
Query: 188 ----------LLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNA 237
LL T Y++++ K G + +A +F + +RGF Y
Sbjct: 285 IEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTV 344
Query: 238 LINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKG 297
+ C+ EA RLLSE E+G P TF ++ R G E+GLE M ++G
Sbjct: 345 FVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRG 404
Query: 298 YTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEAL 357
A+ +V ++ K V A+EI + + G PD +Y+ +I + +D+AL
Sbjct: 405 LMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQAL 464
Query: 358 ELVDQIE--KEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLD 415
+L ++E K PG + + I+ GLC ++ ++L M N + ++
Sbjct: 465 KLFYEMEYRKMSPGFEVFRSLIV--GLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIK 522
Query: 416 GLGKAGHIDRALKFFEGM 433
K G A + + M
Sbjct: 523 AFQKIGDKTNADRVYNEM 540
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 125/293 (42%), Gaps = 1/293 (0%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
+ I I +CK +L + +L LP V+ +L+ + + +L+R+
Sbjct: 237 IRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLL 296
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
+ D I Y+ ++ ++G +FD+M++ + + Y + + G
Sbjct: 297 MKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVK 356
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
EA R+ ++ S P T+N +I G + G+ L + RG +P +N +
Sbjct: 357 EAERLLSEMEESG-VSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEM 415
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
+ + K N A +L++ + G P+ T++ ++ ++Q L++ EM +
Sbjct: 416 VKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKM 475
Query: 299 TFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQG 351
+ + +++ L G+V ++ + M +EP+ Y+ +I + + G
Sbjct: 476 SPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIG 528
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D + ++ ++ A + + +V + M + G + + Y + KG +
Sbjct: 303 DTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLL 362
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
+M ES + P ++N L+ + R G +E + +V+++ PS + +N M+ + K
Sbjct: 363 SEMEESGVSPYDETFNCLIGGFARFGW-EEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSK 421
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
V+ A + +GFVP+ TY+ LI G + ++A +L E P
Sbjct: 422 IENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEV 481
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
F +++ CG++E G + L M+ + + Y ++ A K G AD + +M+
Sbjct: 482 FRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
Query: 330 S 330
S
Sbjct: 542 S 542
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 5/202 (2%)
Query: 56 TKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLE 115
T F+ +C C+ + +AE +L + + GV P TFN LI + RF + G E E
Sbjct: 343 TVFVRVC----CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCE 398
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
M GL P ++N ++ + + K I+ PD +Y+ L+ +
Sbjct: 399 VMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGN 458
Query: 176 MPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTY 235
D+A ++F + + + P + +I GLC G V + +++R P Y
Sbjct: 459 DIDQALKLFYE-MEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIY 517
Query: 236 NALINGLCKARRANEARRLLSE 257
+ALI K A R+ +E
Sbjct: 518 DALIKAFQKIGDKTNADRVYNE 539
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 163/369 (44%), Gaps = 23/369 (6%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D V++N +I+ Y + E+ ++M +G+ VI++N + G ++ G + L +
Sbjct: 209 DAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLI 268
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV---LLSAETDPSTATYNVMING 206
+M D + I + +G A R+ K++ + + D N +I
Sbjct: 269 SRMRNFPTSLDPVAMIIGLKACSLIG----AIRLGKEIHGLAIHSSYDGIDNVRNTLITM 324
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
K + +AL +FR + + T+N++I+G + ++ EA LL E AG +PN
Sbjct: 325 YSKCKDLRHALIVFRQTEEN----SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPN 380
Query: 267 AITFTTVMNCCFRCGRLEQGLE----ILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
+IT +++ C R L+ G E IL K YT + ++V K+G++V A
Sbjct: 381 SITLASILPLCARIANLQHGKEFHCYILRRKCFKDYT---MLWNSLVDVYAKSGKIVAAK 437
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
++++ M + D +Y ++I Y QG AL L ++ + G D T ++
Sbjct: 438 QVSDLMS----KRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSAC 493
Query: 383 CKAKRLNEAVQHLDHMN-SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTY 441
+K ++E + M G L +C++D G+AG + +A M + S
Sbjct: 494 SHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGAT 553
Query: 442 TILVHNLCR 450
+ N C
Sbjct: 554 WATLLNACH 562
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 168/412 (40%), Gaps = 40/412 (9%)
Query: 87 VLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTL 146
++P +VTF + + + S ++L + +N L++ + LF +
Sbjct: 80 LVPKLVTFYSAFNLHNEAQSIIENSDILHPLP----------WNVLIASYAKNELFEEVI 129
Query: 147 HMFDKMIESEIRPDVWSY-NILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+ +M+ IRPD ++Y ++L C + + F V+ + S + + N
Sbjct: 130 AAYKRMVSKGIRPDAFTYPSVLKAC------GETLDVAFGRVVHGSIEVSSYKSSLYVCN 183
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
L + + R L R F + +++NA+IN +EA L + +G E
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD------GFAYCTVVAALVKTGRVV 319
+ IT+ + C + G L +++ MR+ + D G C+++ A ++ G+
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGA-IRLGK-- 300
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIII 379
E +A +G++ NT+I +Y + + AL + Q E+ N T II
Sbjct: 301 EIHGLAIHSSYDGIDN---VRNTLITMYSKCKDLRHALIVFRQTEE----NSLCTWNSII 353
Query: 380 HGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSF 439
G + + EA L M GF N + +L + ++ +F + R F
Sbjct: 354 SGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCF 413
Query: 440 T-YTILVHNLCRARRFLCASKHLVACLQCGFQVLK---ATRRAVIDGLISDG 487
YT+L ++L S +VA Q + K T ++IDG + G
Sbjct: 414 KDYTMLWNSLVDV---YAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQG 462
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 163/371 (43%), Gaps = 60/371 (16%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLP--DVVTFNTLIDAYCRFVSFDAGCEVLER 116
N+ I+ K ++A C L D ++P DVV++ +I + + + + +R
Sbjct: 170 WNVMISGYWKWGNKEEA-CKLFD-----MMPENDVVSWTVMITGFAKVKDLENARKYFDR 223
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNIL--------- 167
M E V+S+N+++SG + G L +F+ M+ +RP+ ++ I+
Sbjct: 224 MPEKS----VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRAD 279
Query: 168 -----------------MHCYFRLGMPD---------EANRVFKDVLLSAETDPSTATYN 201
++C+ + + D A R+F ++ T + T+N
Sbjct: 280 PSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL----GTQRNLVTWN 335
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
MI+G + G + +A +F + +R V+++N+LI G +A A + +
Sbjct: 336 AMISGYTRIGDMSSARQLFDTMPKRN----VVSWNSLIAGYAHNGQAALAIEFFEDMIDY 391
Query: 262 G-HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVE 320
G +P+ +T +V++ C LE G I+ +R + Y +++ + G + E
Sbjct: 392 GDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWE 451
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIH 380
A + ++M E D+ SYNT+ + G E L L+ +++ EG D+ T+T ++
Sbjct: 452 AKRVFDEMK----ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLT 507
Query: 381 GLCKAKRLNEA 391
+A L E
Sbjct: 508 ACNRAGLLKEG 518
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 20/239 (8%)
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P V N++ K AN+ RL + G P+A +F V+ R G L Q L
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQAL-- 126
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
+ G+ D + ++ VK V A ++ +Q+ + + +N MI Y++
Sbjct: 127 ---VEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQI----SQRKGSDWNVMISGYWK 179
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
G +EA +L D + P ND + T++I G K K L A ++ D M ++V+
Sbjct: 180 WGNKEEACKLFDMM----PENDVVSWTVMITGFAKVKDLENARKYFDRMPEK----SVVS 231
Query: 410 SNCVLDGLGKAGHIDRALKFFEGM---EVRDSFTYTILVHNLCRARRFLCASKHLVACL 465
N +L G + G + AL+ F M VR + T ++V + C R ++ LV +
Sbjct: 232 WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
+LG ++VT+N +I Y R + ++ + M + +V+S+NSL++G G
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAA 379
Query: 144 MTLHMFDKMIE-SEIRPD-VWSYNILMHCYFRLGMPD-EANRVFKDVLLSAETDPSTATY 200
+ + F+ MI+ + +PD V ++L C M D E D + + + + Y
Sbjct: 380 LAIEFFEDMIDYGDSKPDEVTMISVLSACGH---MADLELGDCIVDYIRKNQIKLNDSGY 436
Query: 201 NVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
+I + G + A +F ++ R +V++YN L E LLS+ ++
Sbjct: 437 RSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKD 492
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRS 295
G EP+ +T+T+V+ C R G L++G I +R+
Sbjct: 493 EGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN 527
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 152/362 (41%), Gaps = 21/362 (5%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
KLG D N ++D Y + S ++ +V +++ + + +N ++SG + G
Sbjct: 129 KLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGS----DWNVMISGYWKWGNKE 184
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
+FD M E+ DV S+ +++ + ++ + A + F + + S ++N M
Sbjct: 185 EACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRM-----PEKSVVSWNAM 235
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
++G +NG+ +AL +F ++ R G P T+ +I+ + R L+ E
Sbjct: 236 LSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRV 295
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
N T +++ +C ++ I E+ G + + +++ + G + A +
Sbjct: 296 RLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQ 352
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV-DQIEKEGPGNDQYTHTIIIHGL 382
+ + M V S+N++I Y G+ A+E D I+ D+ T ++
Sbjct: 353 LFDTMPKRNV----VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSAC 408
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYT 442
L +D++ N ++ + G++ A + F+ M+ RD +Y
Sbjct: 409 GHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYN 468
Query: 443 IL 444
L
Sbjct: 469 TL 470
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 127/281 (45%), Gaps = 7/281 (2%)
Query: 68 KAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE-AGLTPDV 126
K+ Q ++A+ + + ++ G+ P V + L+ AY R D +L++MK PDV
Sbjct: 136 KSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDV 195
Query: 127 ISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKD 186
+Y++L+ V F + ++ +M E I P+ + NI++ Y R+G D+ +V D
Sbjct: 196 FTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSD 255
Query: 187 VLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKAR 246
+L+S P T N++++ G + S + + G PE T+N LI K R
Sbjct: 256 MLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKR 315
Query: 247 RANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYC 306
++ ++ R+ T+ ++ G + +MRS+G D +C
Sbjct: 316 MYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFC 375
Query: 307 TVVAALVKTG---RVVEADEIAEQMMSNGVEPDLASYNTMI 344
++ G +V+ + ++A + + + A YN +I
Sbjct: 376 CLINGYANAGLFHKVISSVQLAAKF---EIPENTAFYNAVI 413
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 142/358 (39%), Gaps = 47/358 (13%)
Query: 133 MSGAVRKGLFPMTLHMFDKMIESEI-RPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSA 191
+S + K + L +FD + E +P +Y L+ + G P+ A ++F D +L
Sbjct: 95 LSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLF-DEMLEE 153
Query: 192 ETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV---PEVLTYNALINGLCKARRA 248
+P+ Y ++ ++ + +A S+ + + F P+V TY+ L+ A +
Sbjct: 154 GLEPTVELYTALLAAYTRSNLIDDAFSILDKM--KSFPQCQPDVFTYSTLLKACVDASQF 211
Query: 249 NEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR-SKGYTFDGFAYCT 307
+ L E E PN +T V++ R GR +Q ++L++M S D +
Sbjct: 212 DLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNI 271
Query: 308 VVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA----------- 356
+++ G++ + E+ + G+EP+ ++N +I Y ++ D+
Sbjct: 272 ILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLE 331
Query: 357 -----------------------LELV-DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
+EL DQ+ EG D T +I+G A ++ +
Sbjct: 332 FPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVI 391
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVH 446
+ N N V+ KA + + + M+ R DS T+ I+V
Sbjct: 392 SSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVE 449
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 113/267 (42%), Gaps = 8/267 (2%)
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
P TY ++ L K+G + A +F + G P V Y AL+ ++ ++A +
Sbjct: 122 PKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSI 181
Query: 255 LSEFREAGH-EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
L + + +P+ T++T++ C + + + EM + T + V++
Sbjct: 182 LDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYG 241
Query: 314 KTGRVVEADEIAEQMM-SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ 372
+ GR + +++ M+ S +PD+ + N ++ ++ G++D ++ G +
Sbjct: 242 RVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPET 301
Query: 373 YTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF-- 430
T I+I K + ++ +++M L F + N +++ G F
Sbjct: 302 RTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQ 361
Query: 431 ---EGMEVRDSFTYTILVHNLCRARRF 454
EGM+ D+ T+ L++ A F
Sbjct: 362 MRSEGMKA-DTKTFCCLINGYANAGLF 387
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 99/236 (41%), Gaps = 4/236 (1%)
Query: 215 NALSMFRNLQRRGFV-PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
AL +F L+ + F P+ TY L+ L K+ + N A++L E E G EP +T +
Sbjct: 106 QALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTAL 165
Query: 274 MNCCFRCGRLEQGLEILTEMRS-KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
+ R ++ IL +M+S D F Y T++ A V + D + ++M
Sbjct: 166 LAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERL 225
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALE-LVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
+ P+ + N ++ Y R GR D+ + L D + D +T II+ +++
Sbjct: 226 ITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMM 285
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHN 447
+ + G N ++ GK D+ E M + F +T +N
Sbjct: 286 ESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMR-KLEFPWTTSTYN 340
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 173/408 (42%), Gaps = 32/408 (7%)
Query: 74 KAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLM 133
+AE +L D + G++P++VT+NTL+ Y F +L+ KE G P+ I+Y++ +
Sbjct: 202 EAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTAL 261
Query: 134 SGAVRK----GLFPMTLHMFDKMIESEIRPDV---WSYNILMH-------CY--FRLGMP 177
R G + + +K + EI DV W + + CY R +
Sbjct: 262 LVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLV 321
Query: 178 DEAN---RVFK--DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEV 232
+ N RV K + + SA PS + +I + + +++ ++ R +
Sbjct: 322 KDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISL 381
Query: 233 LTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT-------FTTVMNCCFRCGRLEQ 285
N LI + KA++ A + + + G EPN ++ F +++ + G
Sbjct: 382 SVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRW 441
Query: 286 GLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIY 345
G+ +L +M KG + V+ A K A +I + M+ NG +P + SY ++
Sbjct: 442 GVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLS 501
Query: 346 LYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGF 405
+ DEA + + + K G + Y +T + L ++ N L M S G
Sbjct: 502 ALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEP 561
Query: 406 NLVASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLC 449
++V N V+ G + G A ++F M+ + TY +L+ L
Sbjct: 562 SVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 609
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 121/287 (42%), Gaps = 8/287 (2%)
Query: 41 KNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPD-------VVT 93
K + RI + +S N I M KAK+ A + D + G P+ V
Sbjct: 366 KELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSH 425
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
FN L+ A + + G +L +M++ GL P +N+++ + + +F M+
Sbjct: 426 FNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMV 485
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
++ +P V SY L+ + + DEA RV+ ++ +P+ Y M + L
Sbjct: 486 DNGEKPTVISYGALLSALEKGKLYDEAFRVWNH-MIKVGIEPNLYAYTTMASVLTGQQKF 544
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
+ ++ + + +G P V+T+NA+I+G + + A + EPN IT+ +
Sbjct: 545 NLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEML 604
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVE 320
+ + E+ + +++G Y VV + G ++
Sbjct: 605 IEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAETYGATID 651
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 115/257 (44%), Gaps = 8/257 (3%)
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISY-------NSLMSGAVRKGLFPMTLH 147
N LI + + A E+ E + + G P+ +SY N L+S A ++G++ +
Sbjct: 385 NHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVR 444
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
+ +KM + ++P +N ++ + A ++FK ++ + E P+ +Y +++ L
Sbjct: 445 LLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEK-PTVISYGALLSAL 503
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
K A ++ ++ + G P + Y + + L ++ N LL E G EP+
Sbjct: 504 EKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSV 563
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
+TF V++ C R G E M+S+ + Y ++ AL + A E+ +
Sbjct: 564 VTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVK 623
Query: 328 MMSNGVEPDLASYNTMI 344
+ G++ Y+ ++
Sbjct: 624 AQNEGLKLSSKPYDAVV 640
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 12/291 (4%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKE--AGLTPDVISYNSLMSGAVRKGLFP 143
GV P LI A R + G E+ +R++E + ++ V ++ + G +K +
Sbjct: 341 GVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKK--WW 398
Query: 144 MTLHMFDKMIESEIRPDVWSY-------NILMHCYFRLGMPDEANRVFKDVLLSAETDPS 196
L +++ +++ P+ SY NIL+ + G+ R+ + + P
Sbjct: 399 AALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLL-NKMEDKGLKPQ 457
Query: 197 TATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
+N ++ K A+ +F+ + G P V++Y AL++ L K + +EA R+ +
Sbjct: 458 RRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWN 517
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
+ G EPN +TT+ + + +L EM SKG + V++ + G
Sbjct: 518 HMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNG 577
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
A E +M S VEP+ +Y +I + A EL + + EG
Sbjct: 578 LSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEG 628
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 161/362 (44%), Gaps = 14/362 (3%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
DVVT+NT+I+ YCRF D ++ E MK++ + PD + +++S R G ++
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
+ +IE+++R D L+ Y G D A F+ + + + M++G K
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR-----NLFVSTAMVSGYSK 290
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
G + +A +F +++ V + +I+ ++ EA R+ E +G +P+ ++
Sbjct: 291 CGRLDDAQVIFDQTEKKDLV----CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVS 346
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
+V++ C G L++ + + + G + ++ K G + ++ E+M
Sbjct: 347 MFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP 406
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
V S+++MI G +AL L ++++E ++ T +++G + +
Sbjct: 407 RRNV----VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE 462
Query: 390 EAVQHLDHM-NSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNL 448
E + M + L C++D G+A + AL+ E M V + + +
Sbjct: 463 EGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
Query: 449 CR 450
CR
Sbjct: 523 CR 524
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 158/384 (41%), Gaps = 30/384 (7%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
RI +++NV F M R + T N I C+ +D+A + + V+PD +
Sbjct: 161 RINYARNV-FDEM-SHRDVVT--WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILC 216
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
++ A R + + E + E + D +L++ G M F KM
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKM--- 273
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN 215
+R +++ ++ Y + G D+A +F + MI+ ++ Y
Sbjct: 274 SVR-NLFVSTAMVSGYSKCGRLDDAQVIFDQT-----EKKDLVCWTTMISAYVESDYPQE 327
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
AL +F + G P+V++ ++I+ ++A+ + S G E ++N
Sbjct: 328 ALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALIN 387
Query: 276 CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
+CG L+ ++ +M + ++ +++ AL G +A + +M VEP
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVV----SWSSMINALSMHGEASDALSLFARMKQENVEP 443
Query: 336 DLASYNTMIYLYFRQGRVDEALELVDQIEKE---GPGNDQYTHTIIIHGLCKAKRLNEAV 392
+ ++ ++Y G V+E ++ + E P + Y + + G +A L EA+
Sbjct: 444 NEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG--RANLLREAL 501
Query: 393 QHLDHMNSLGFGFNLVASNCVLDG 416
+ ++ M VASN V+ G
Sbjct: 502 EVIESMP--------VASNVVIWG 517
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 179/417 (42%), Gaps = 64/417 (15%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
+VV++ ++ A C + E+ + M E +V+S+N+L++G +R G +F
Sbjct: 137 NVVSWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVF 192
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
D M DV S+N ++ Y +EA +F D+ ++ + T+ M+ G C+
Sbjct: 193 DAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDM-----SEKNVVTWTSMVYGYCR 243
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA--GHEPNA 267
G V A +F + R V ++ A+I+G EA L E ++ PN
Sbjct: 244 YGDVREAYRLFCEMPERNIV----SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNG 299
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
T+++ + CG GL + E R G +++ Q
Sbjct: 300 ---ETLISLAYACG----GLGV--EFRRLG------------------------EQLHAQ 326
Query: 328 MMSNG---VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
++SNG V+ D +++++Y G + A L+++ D + III+ K
Sbjct: 327 VISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE------SFDLQSCNIIINRYLK 380
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTIL 444
L A + + SL + V+ ++DG +AG + RA F+ + +D T+T++
Sbjct: 381 NGDLERAETLFERVKSL---HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVM 437
Query: 445 VHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRK 501
+ L + F A+ L ++CG + L +T ++ + ++ K + I K
Sbjct: 438 ISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAK 494
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 145/326 (44%), Gaps = 16/326 (4%)
Query: 23 LNHENPITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDG 82
++H+ + L S + + S + NI I K L++AE L +
Sbjct: 335 VDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAE-TLFER 393
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
VK L D V++ ++ID Y + +++ + D +++ ++SG V+ LF
Sbjct: 394 VK--SLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHD----KDGVTWTVMISGLVQNELF 447
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL-LSAETDPSTATYN 201
+ M+ ++P +Y++L+ D+ + + +A DP N
Sbjct: 448 AEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQN 507
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
+++ K G + +A +F + ++ + +++N++I GL A++A L E ++
Sbjct: 508 SLVSMYAKCGAIEDAYEIFAKMVQK----DTVSWNSMIMGLSHHGLADKALNLFKEMLDS 563
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFA-YCTVVAALVKTGRVVE 320
G +PN++TF V++ C G + +GLE+ M+ G Y +++ L + G++ E
Sbjct: 564 GKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKE 623
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYL 346
A+E + PD Y ++ L
Sbjct: 624 AEEFISAL---PFTPDHTVYGALLGL 646
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 19/295 (6%)
Query: 160 DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSM 219
D+ S NI+++ Y + G + A +F+ V ++ ++ MI+G + G V A +
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERV----KSLHDKVSWTSMIDGYLEAGDVSRAFGL 422
Query: 220 FRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFR 279
F+ L + V T+ +I+GL + EA LLS+ G +P T++ +++
Sbjct: 423 FQKLHDKDGV----TWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGA 478
Query: 280 CGRLEQGLEI--LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDL 337
L+QG I + + Y D ++V+ K G + +A EI +M V+ D
Sbjct: 479 TSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDT 534
Query: 338 ASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
S+N+MI G D+AL L ++ G + T ++ + + ++
Sbjct: 535 VSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKA 594
Query: 398 MN---SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLC 449
M S+ G + S ++D LG+AG + A +F + T + LC
Sbjct: 595 MKETYSIQPGIDHYIS--MIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLC 647
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 107/239 (44%), Gaps = 22/239 (9%)
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
L + G VH A + + +RG + V+ + +L++ K +EAR L E E N
Sbjct: 53 LSEGGLVH-ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLF----EVMPERN 107
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
+T ++ +C R+ + + EM + ++ ++ AL GR +A E+ +
Sbjct: 108 IVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFD 162
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
+M E ++ S+NT++ R G +++A ++ D + P D + +I G +
Sbjct: 163 EM----PERNVVSWNTLVTGLIRNGDMEKAKQVFDAM----PSRDVVSWNAMIKGYIEND 214
Query: 387 RLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILV 445
+ EA M+ N+V ++ G + G + A + F M R+ ++T ++
Sbjct: 215 GMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMI 269
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 155/381 (40%), Gaps = 30/381 (7%)
Query: 56 TKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLE 115
T C SMC + L + + G D+ ++D Y +F +
Sbjct: 82 TTLTKSCSLSMCVYQGLQLHSQIW----RFGFCADMYVSTGVVDMYAKFGKMGCARNAFD 137
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
M +S+ +L+SG +R G + +FD+M + DV YN +M + + G
Sbjct: 138 EMPHRS----EVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDGFVKSG 190
Query: 176 MPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTY 235
A R+F ++ T + T+ MI+G C + A +F + R V ++
Sbjct: 191 DMTSARRLFDEM-----THKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV----SW 241
Query: 236 NALINGLCKARRANEARRLLSEFREAGH-EPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
N +I G C+ ++ E RL E + +P+ +T +V+ G L G ++
Sbjct: 242 NTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQ 301
Query: 295 SKGYTFDGFAYCTVVAALV-KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
K CT + + K G + +A I ++M E +AS+N MI+ Y G
Sbjct: 302 RKKLD-KKVKVCTAILDMYSKCGEIEKAKRIFDEM----PEKQVASWNAMIHGYALNGNA 356
Query: 354 DEALEL-VDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNC 412
AL+L V + +E P D+ T +I + E + M +G + C
Sbjct: 357 RAALDLFVTMMIEEKP--DEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGC 414
Query: 413 VLDGLGKAGHIDRALKFFEGM 433
++D LG+AG + A M
Sbjct: 415 MVDLLGRAGSLKEAEDLITNM 435
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 12/219 (5%)
Query: 236 NALINGLCKARRANEARRLLSEFR-EAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
N++I + R+ ++ L + R E P+ TFTT+ C + QGL++ +++
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 295 SKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
G+ D + VV K G++ A ++M S+ +I Y R G +D
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSE----VSWTALISGYIRCGELD 161
Query: 355 EALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL 414
A +L DQ+ D + ++ G K+ + A + D M ++ ++
Sbjct: 162 LASKLFDQMPHV---KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK----TVITWTTMI 214
Query: 415 DGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARR 453
G ID A K F+ M R+ ++ ++ C+ ++
Sbjct: 215 HGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQ 253
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 145/300 (48%), Gaps = 29/300 (9%)
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+H K+ +S + S+N ++ YF MP +A ++F ++ D + ++N +++
Sbjct: 33 IHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM-----PDRNIISWNGLVS 87
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
G KNG + A +F + R V+++ AL+ G + + A L + E
Sbjct: 88 GYMKNGEIDEARKVFDLMPERN----VVSWTALVKGYVHNGKVDVAESLFWKMPEK---- 139
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIA 325
N +++T ++ + GR++ ++ + K D A +++ L K GRV EA EI
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIF 195
Query: 326 EQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKA 385
++M V ++ TM+ Y + RVD+A ++ D + P + + T ++ G +
Sbjct: 196 DEMSERSV----ITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGYVQN 247
Query: 386 KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILV 445
R+ +A + + M ++A N ++ GLG+ G I +A + F+ M+ R+ ++ ++
Sbjct: 248 GRIEDAEELFEVMPVKP----VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 137/315 (43%), Gaps = 49/315 (15%)
Query: 190 SAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRAN 249
S P TA NV I L + G +H A +F + + + ++N+++ G
Sbjct: 12 STTIPPPTA--NVRITHLSRIGKIHEARKLFDSCDSKS----ISSWNSMVAGYFANLMPR 65
Query: 250 EARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVV 309
+AR+L E + N I++ +++ + G +++ ++ M + ++ +V
Sbjct: 66 DARKLFDEMPDR----NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV----SWTALV 117
Query: 310 AALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPG 369
V G+V ++AE + E + S+ M+ + + GR+D+A +L + I P
Sbjct: 118 KGYVHNGKV----DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI----PD 169
Query: 370 NDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKF 429
D T +IHGLCK R++EA + D M+ +++ ++ G G+ +D A K
Sbjct: 170 KDNIARTSMIHGLCKEGRVDEAREIFDEMSER----SVITWTTMVTGYGQNNRVDDARKI 225
Query: 430 FEGMEVRDSFTYTILVHNLCRARRFLCAS--------KHLVACLQCGFQVLKATRRAVID 481
F+ M + ++T ++ + R A K ++AC A+I
Sbjct: 226 FDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC------------NAMIS 273
Query: 482 GLISDGLKNEAKKVR 496
GL G K E K R
Sbjct: 274 GL---GQKGEIAKAR 285
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 31/260 (11%)
Query: 124 PD--VISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
PD +IS+N L+SG ++ G +FD M E +V S+ L+ Y G D A
Sbjct: 75 PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAE 130
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
+F + + + ++ VM+ G ++G + +A ++ + + + + ++I+G
Sbjct: 131 SLFWKM-----PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHG 181
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
LCK R +EAR + E E + IT+TT++ + R++ +I M K
Sbjct: 182 LCKEGRVDEAREIFDEMSER----SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV-- 235
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
++ +++ V+ GR+ +A+E+ E M V+P +A N MI ++G + +A + D
Sbjct: 236 --SWTSMLMGYVQNGRIEDAEELFEVM---PVKPVIAC-NAMISGLGQKGEIAKARRVFD 289
Query: 362 QIEKEGPGNDQYTHTII-IH 380
+++ ND T+I IH
Sbjct: 290 SMKER---NDASWQTVIKIH 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 173/408 (42%), Gaps = 63/408 (15%)
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
V++ ++ + + D C++ E + + D I+ S++ G ++G +FD+
Sbjct: 142 VSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDE 197
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
M E V ++ ++ Y + D+A ++F DV+ + + ++ M+ G +NG
Sbjct: 198 MSER----SVITWTTMVTGYGQNNRVDDARKIF-DVM----PEKTEVSWTSMLMGYVQNG 248
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE----------- 260
+ +A +F + V V+ NA+I+GL + +ARR+ +E
Sbjct: 249 RIEDAEELFEVMP----VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIK 304
Query: 261 --------------------AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
G P T ++++ C L G ++ ++ +
Sbjct: 305 IHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV 364
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
D + ++ +K G +V++ I ++ S D+ +N++I Y G +EAL++
Sbjct: 365 DVYVASVLMTMYIKCGELVKSKLIFDRFPSK----DIIMWNSIISGYASHGLGEEALKVF 420
Query: 361 DQIEKEGPGN-DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASN--CVLDGL 417
++ G ++ T + A + E ++ + M S+ FG + ++ C++D L
Sbjct: 421 CEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESV-FGVKPITAHYACMVDML 479
Query: 418 GKAGHIDRALKFFEGMEVR-DSFTYTILVHNLCRARRFL-----CASK 459
G+AG + A++ + M V D+ + L+ CR L CA K
Sbjct: 480 GRAGRFNEAMEMIDSMTVEPDAAVWGSLL-GACRTHSQLDVAEFCAKK 526
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 8/195 (4%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
K GV P T +++ S G +V ++ DV + LM+ ++ G
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELV 383
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
+ +FD+ D+ +N ++ Y G+ +EA +VF ++ LS T P+ T+
Sbjct: 384 KSKLIFDRFPSK----DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 204 INGLCKNGYVHNALSMFRNLQRR-GFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
++ G V L ++ +++ G P Y +++ L +A R NEA ++
Sbjct: 440 LSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV-- 497
Query: 263 HEPNAITFTTVMNCC 277
EP+A + +++ C
Sbjct: 498 -EPDAAVWGSLLGAC 511
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 49/294 (16%)
Query: 87 VLPDV--VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
V+P+ V++ +++ Y + + E+ E M + P VI+ N+++SG +KG
Sbjct: 228 VMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP---VKP-VIACNAMISGLGQKGEIAK 283
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
+FD M E R D S+ ++ + R G EA +F +L+ + T + I
Sbjct: 284 ARRVFDSMKE---RNDA-SWQTVIKIHERNGFELEALDLF--ILMQKQGVRPTFPTLISI 337
Query: 205 NGLCKN-GYVHNALSMFRNLQRRGF-------------------------------VPEV 232
+C + +H+ + L R F ++
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397
Query: 233 LTYNALINGLCKARRANEARRLLSEFREAGH-EPNAITFTTVMNCCFRCGRLEQGLEILT 291
+ +N++I+G EA ++ E +G +PN +TF ++ C G +E+GL+I
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE 457
Query: 292 EMRSK-GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
M S G Y +V L + GR EA E+ + M VEPD A + +++
Sbjct: 458 SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT---VEPDAAVWGSLL 508
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 170/401 (42%), Gaps = 5/401 (1%)
Query: 54 LSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEV 113
L + +N I+S + + KAE + ++LG+ + T TLI Y R +
Sbjct: 633 LGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRL 692
Query: 114 LERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFR 173
E+ TP S++ VR G +F + E P + +IL++
Sbjct: 693 YLAAGESK-TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTN 751
Query: 174 LGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVL 233
G EA + + L + T YN +I + + G + A ++ + G +
Sbjct: 752 RGKHREAEHISR-TCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQ 810
Query: 234 TYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
TYN +I+ + + ++A + S R +G + +T ++ + G++ + L + +EM
Sbjct: 811 TYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEM 870
Query: 294 RSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRV 353
+ KG +Y +V + E DE+ + M NG DL++Y T+I +Y +
Sbjct: 871 QKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQF 930
Query: 354 DEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
EA + + ++++G + ++ L KA + EA + M+ G + +
Sbjct: 931 AEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTI 990
Query: 414 LDGLGKAGHIDRALKFFEGM---EVRDSFTYTILVHNLCRA 451
L G G ++ + F+E M V D + +V +L +A
Sbjct: 991 LKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVVEDLYKA 1031
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/473 (20%), Positives = 194/473 (41%), Gaps = 54/473 (11%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT 96
+ ++++ ++ + R +F+ SM + DK E VL + L DV+
Sbjct: 553 VAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVL----NVSQL-DVMALGL 607
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
+++ + + + +L M + L + N ++S VR+G + D +I
Sbjct: 608 MLNLRLKEGNLNETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIADIIIRLG 665
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETD-PSTATYNVMINGLCKNGYVHN 215
+R + + L+ Y R EA R++ L + E+ P + MI+ + G++ +
Sbjct: 666 LRMEEETIATLIAVYGRQHKLKEAKRLY---LAAGESKTPGKSVIRSMIDAYVRCGWLED 722
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
A +F E E G +P A+T + ++N
Sbjct: 723 AYGLFM-----------------------------------ESAEKGCDPGAVTISILVN 747
Query: 276 CCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
G+ + I K D Y T++ A+++ G++ A EI E+M ++GV
Sbjct: 748 ALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPC 807
Query: 336 DLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHL 395
+ +YNTMI +Y R ++D+A+E+ + G D+ +T +I K +++EA+
Sbjct: 808 SIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLF 867
Query: 396 DHMNSLGF-----GFNLVASNCVLDGLGKAGHIDRALKFFE-GMEVRDSFTYTILVHNLC 449
M G +N++ C L +D L+ E D TY L+
Sbjct: 868 SEMQKKGIKPGTPSYNMMVKICATSRLHH--EVDELLQAMERNGRCTDLSTYLTLIQVYA 925
Query: 450 RARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKA 502
+ +F A K + + G + + +++ L+ G+ EA++ K+ +A
Sbjct: 926 ESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEA 978
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 137/350 (39%), Gaps = 40/350 (11%)
Query: 124 PDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRV 183
P V+ Y ++ + G M F +M+E PD + ++ Y R G A
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGR-HSAMLT 244
Query: 184 FKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLC 243
F + ST+ YN M++ L K + + ++ + G P TY +++
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYA 304
Query: 244 KARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGF 303
K EA + E + G P +T+++V++ + G E+ + + +MRS+G +
Sbjct: 305 KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNY 364
Query: 304 AYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQI 363
T+++ KT +A + M N + D +I +Y + G +A + ++
Sbjct: 365 TCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEET 424
Query: 364 EKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHI 423
E+ D+ T+ A+ + H+NS G++
Sbjct: 425 ERLNLLADEKTYL--------------AMSQV-HLNS--------------------GNV 449
Query: 424 DRALKFFEGMEVRD----SFTYTILVHNLCRARRFLCASKHLVACLQCGF 469
+AL E M+ RD F Y +++ + + CA + A + G
Sbjct: 450 VKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL 499
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/321 (18%), Positives = 134/321 (41%), Gaps = 1/321 (0%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
++L P VV + ++ Y + E M E G PD ++ +++ R G
Sbjct: 180 LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRH 239
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
L + + E I YN ++ + + ++ + ++ P+ TY +
Sbjct: 240 SAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLE-MVEEGVPPNEFTYTL 298
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+++ K G+ AL F ++ GFVPE +TY+++I+ KA +A L + R G
Sbjct: 299 VVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQG 358
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
P+ T T+++ ++ + L + +M D ++ K G +A
Sbjct: 359 IVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQ 418
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+ E+ + D +Y M ++ G V +AL++++ ++ ++ + +++
Sbjct: 419 SMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCY 478
Query: 383 CKAKRLNEAVQHLDHMNSLGF 403
K + ++ A + ++ G
Sbjct: 479 AKIQNVDCAEEAFRALSKTGL 499
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 165/374 (44%), Gaps = 8/374 (2%)
Query: 39 HSKNVTFRIMVKGRS--LSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNT 96
HS +TF V+ R LST N ++S+ K K + ++ V+ GV P+ T+
Sbjct: 239 HSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTL 298
Query: 97 LIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESE 156
++ +Y + + + MK G P+ ++Y+S++S +V+ G + + +++ M
Sbjct: 299 VVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQG 358
Query: 157 IRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
I P ++ ++ Y++ +A +F D + + ++I K G H+A
Sbjct: 359 IVPSNYTCATMLSLYYKTENYPKALSLFAD-MERNKIPADEVIRGLIIRIYGKLGLFHDA 417
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC 276
SMF +R + + TY A+ + +A ++ + + + ++ C
Sbjct: 418 QSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQC 477
Query: 277 CFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPD 336
+ ++ E + G D + ++ + +A +Q+M + V D
Sbjct: 478 YAKIQNVDCAEEAFRALSKTGLP-DASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFD 536
Query: 337 LASYNTMIYLYFRQGRVDEALELVDQIEKEGPGND-QYTHTII--IHGLCKAKRLNEAVQ 393
+ Y T + +Y ++G V EA +L+ ++ +E D ++ T+ +H + K + +EAV
Sbjct: 537 IELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDK-HEAVL 595
Query: 394 HLDHMNSLGFGFNL 407
++ ++ + G L
Sbjct: 596 NVSQLDVMALGLML 609
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 126/297 (42%), Gaps = 1/297 (0%)
Query: 71 QLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYN 130
++ AE ++ +++G PD V T++ Y R+ A + ++E + YN
Sbjct: 203 KIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYN 262
Query: 131 SLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLS 190
++S +K + ++ +M+E + P+ ++Y +++ Y + G +EA + F + + S
Sbjct: 263 FMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGE-MKS 321
Query: 191 AETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANE 250
P TY+ +I+ K G A+ ++ +++ +G VP T +++ K +
Sbjct: 322 LGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPK 381
Query: 251 ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVA 310
A L ++ + + ++ + G + E D Y +
Sbjct: 382 ALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQ 441
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
+ +G VV+A ++ E M + + +Y M+ Y + VD A E + K G
Sbjct: 442 VHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTG 498
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 157/366 (42%), Gaps = 23/366 (6%)
Query: 89 PDVVTFNTLIDAYCR----FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
P+ +NTLI AY +S A L+ + E+ P+ ++ L+ A +
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWA---FLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
+ ++S + DV+ N L+HCYF G D A +VF + + ++N MI
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI-----KEKDVVSWNSMI 204
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
NG + G AL +F+ ++ +T +++ K R R++ S E
Sbjct: 205 NGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN 264
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD-E 323
N +++ +CG +E + M K D + T++ G + D E
Sbjct: 265 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK----DNVTWTTML-----DGYAISEDYE 315
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIE-KEGPGNDQYTHTIIIHGL 382
A +++++ + D+ ++N +I Y + G+ +EAL + +++ ++ +Q T +
Sbjct: 316 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 375
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYT 442
+ L ++ G N ++ ++ K G ++++ + F +E RD F ++
Sbjct: 376 AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 435
Query: 443 ILVHNL 448
++ L
Sbjct: 436 AMIGGL 441
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 171/398 (42%), Gaps = 62/398 (15%)
Query: 82 GVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGL 141
VK V DV N+LI Y D+ C+V +KE DV+S+NS+++G V+KG
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK----DVVSWNSMINGFVQKGS 212
Query: 142 FPMTLHMFDKMIESEIRPD----------------------VWSY-------------NI 166
L +F KM +++ V SY N
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
++ Y + G ++A R+F A + T+ M++G + A + ++ ++
Sbjct: 273 MLDMYTKCGSIEDAKRLF-----DAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFR-EAGHEPNAITFTTVMNCCFRCGRLEQ 285
+++ +NALI+ + + NEA + E + + + N IT + ++ C + G LE
Sbjct: 328 ----DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALEL 383
Query: 286 GLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP-DLASYNTMI 344
G I + ++ G + ++ K G + ++ E+ N VE D+ ++ MI
Sbjct: 384 GRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVF-----NSVEKRDVFVWSAMI 438
Query: 345 YLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFG 404
G +EA+++ ++++ + T T + ++EA M S
Sbjct: 439 GGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES---N 495
Query: 405 FNLVASN----CVLDGLGKAGHIDRALKFFEGMEVRDS 438
+ +V C++D LG++G++++A+KF E M + S
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPS 533
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 143/330 (43%), Gaps = 15/330 (4%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D VT+ T++D Y ++A EVL M + D++++N+L+S + G L +F
Sbjct: 297 DNVTWTTMLDGYAISEDYEAAREVLNSMPQK----DIVAWNALISAYEQNGKPNEALIVF 352
Query: 150 DKM-IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
++ ++ ++ + + + ++G E R + + + +I+
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGAL-ELGRWIHSYIKKHGIRMNFHVTSALIHMYS 411
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
K G + + +F ++++R +V ++A+I GL NEA + + +EA +PN +
Sbjct: 412 KCGDLEKSREVFNSVEKR----DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSK-GYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
TFT V C G +++ + +M S G + Y +V L ++G + +A + E
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEA 527
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M + P + + ++ ++ A ++ + P ND H ++ + K +
Sbjct: 528 M---PIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG-AHVLLSNIYAKLGK 583
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGL 417
+ HM G S+ +DG+
Sbjct: 584 WENVSELRKHMRVTGLKKEPGCSSIEIDGM 613
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 157/372 (42%), Gaps = 15/372 (4%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
+LG DV N LI Y + + V E + T ++S+ +++S + G
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT--IVSWTAIVSAYAQNGEPM 204
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL-LSAETDPST-ATYN 201
L +F +M + +++PD + +++ + L + + V+ + E +P + N
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN 264
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
M K G V A +F ++ P ++ +NA+I+G K A EA + E
Sbjct: 265 TM---YAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
P+ I+ T+ ++ C + G LEQ + + Y D F ++ K G V
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV--- 374
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHG 381
E A + ++ D+ ++ MI Y GR EA+ L +E+ G + T ++
Sbjct: 375 -EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Query: 382 LCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTY 441
+ + E + M CV+D LG+AGH+D+A + + M V+ T
Sbjct: 434 CNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTV 493
Query: 442 TILVHNLCRARR 453
+ + C+ R
Sbjct: 494 WGALLSACKKHR 505
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/433 (17%), Positives = 165/433 (38%), Gaps = 27/433 (6%)
Query: 5 AAPALHFNAAYPFTHPAILNHENPITSFLTQRITHS---KNVTFRIMVKGRSLSTKFLNI 61
A+P L+ N+ H + + L TH K + R++V G S +
Sbjct: 8 ASPLLYTNSGI---------HSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITK 58
Query: 62 CIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAG 121
I + + A V D + P + +N +I Y R F + M+ A
Sbjct: 59 LIHASSSFGDITFARQVFDDLPR----PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 122 LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
++PD ++ L+ M + ++ DV+ N L+ Y + A
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 182 RVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALING 241
VF+ + L T ++ +++ +NG AL +F +++ P+ + +++N
Sbjct: 175 TVFEGLPLPERT---IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFD 301
+ + R + + + G E ++ +CG++ + +M+S
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLIL- 290
Query: 302 GFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVD 361
+ +++ K G EA ++ +M++ V PD S + I + G +++A + +
Sbjct: 291 ---WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 362 QIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAG 421
+ + +D + + +I K + A D ++V + ++ G G G
Sbjct: 348 YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT----LDRDVVVWSAMIVGYGLHG 403
Query: 422 HIDRALKFFEGME 434
A+ + ME
Sbjct: 404 RAREAISLYRAME 416
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 139/325 (42%), Gaps = 13/325 (4%)
Query: 124 PDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRV 183
P + +N+++ G R F L M+ M + + PD +++ L+ L + R
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHL-QMGRF 140
Query: 184 FKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPE--VLTYNALING 241
+ D N +I K + +A ++F L +PE ++++ A+++
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP----LPERTIVSWTAIVSA 196
Query: 242 LCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR-LEQGLEILTEMRSKGYTF 300
+ EA + S+ R+ +P+ + +V+N F C + L+QG I + G
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA-FTCLQDLKQGRSIHASVVKMGLEI 255
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
+ ++ K G+V A + ++M S P+L +N MI Y + G EA+++
Sbjct: 256 EPDLLISLNTMYAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMF 311
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
++ + D + T I + L +A +++ + ++ S+ ++D K
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 421 GHIDRALKFFEGMEVRDSFTYTILV 445
G ++ A F+ RD ++ ++
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMI 396
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 8/283 (2%)
Query: 56 TKFLNICIASMCKAKQLDKAECVLIDGVKLG---VLPDVVTFNTLIDAYCRFVSFDAGCE 112
T F N+ + ++C+ K + +AE + +G + + N ++ + + + E
Sbjct: 152 TSFYNL-VDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKE 210
Query: 113 VLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYF 172
++M G+T D+ SY+ M + G + ++ +M ++ DV +YN ++
Sbjct: 211 YWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIG 270
Query: 173 RLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEV 232
+ RVF++ + +P+ AT+N +I LC++G + +A M + +RG P+
Sbjct: 271 ASQGVEFGIRVFRE-MRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 233 LTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTE 292
+TY L + L + +E L +G P T+ +M R G L+ L +
Sbjct: 330 ITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKT 386
Query: 293 MRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP 335
M+ G T D AY V+ AL++ G + A E E+M+ G+ P
Sbjct: 387 MKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 173/400 (43%), Gaps = 6/400 (1%)
Query: 37 ITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKA-ECVLIDGVKLGVLPDVVTFN 95
I++ + FR + S +C A C + KA E + G TFN
Sbjct: 26 ISNVDDAKFRSQEEEDQSSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFN 85
Query: 96 TLIDAYCRFVSFDAGCEVLERM-KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
+ID ++ F+ ++ RM P+ +++ + V L + +DK+ +
Sbjct: 86 RVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDD 145
Query: 155 SEIRPDVWSYNIL-MHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
+R + YN++ C + + E K+V+ + + +T +N+++ G K G+
Sbjct: 146 FNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWW 205
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTV 273
++ + G ++ +Y+ ++ +CK+ + +A +L E + + + + + TV
Sbjct: 206 GKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTV 265
Query: 274 MNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGV 333
+ +E G+ + EMR +G + + T++ L + GR+ +A + ++M G
Sbjct: 266 IRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGC 325
Query: 334 EPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQ 393
+PD +Y + L+ R + E L L ++ + G T+ +++ + L +
Sbjct: 326 QPDSITY---MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLY 382
Query: 394 HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
M G + A N V+D L + G +D A ++ E M
Sbjct: 383 VWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEM 422
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 13/286 (4%)
Query: 88 LPDVVTFNTLIDAYCR---FVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
L D +F L+DA C V + C + + +N ++ G + G +
Sbjct: 148 LRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGK 207
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
+ KM + D++SY+I M + G P +A +++K+ + S YN +I
Sbjct: 208 CKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKE-MKSRRMKLDVVAYNTVI 266
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
+ + V + +FR ++ RG P V T+N +I LC+ R +A R+L E + G +
Sbjct: 267 RAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQ 326
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILT---EMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
P++IT+ C F RLE+ EIL+ M G Y ++ + G +
Sbjct: 327 PDSITYM----CLF--SRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPV 380
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
+ + M +G PD A+YN +I ++G +D A E +++ + G
Sbjct: 381 LYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERG 426
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 171/406 (42%), Gaps = 51/406 (12%)
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
F ++I + R + + + + E +S+++L+ V++ H+F K
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 153 IES-EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
E+ + + N+LM ++ D A++VF+++ P +Y +++ G C G
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQG-CYPDRDSYRILMKGFCLEG 201
Query: 212 YVHNA----LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEA---------------- 251
+ A SMF + ++G +++ Y L++ LC A ++A
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 252 ---------------------RRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEIL 290
+RLL+E G P +++ + F G+L +G E+L
Sbjct: 262 RCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVL 321
Query: 291 TEMRSKGYTFDGFAYCTVVAALVKTGRVVEA-DEIAEQMMSNGVEPDLASYNTMIYLYFR 349
MRSKG+ F Y V AL + G++ EA I ++MM P + YN +I
Sbjct: 322 LAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCD 381
Query: 350 QGRVDEALELVDQIEKEGP--GNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNL 407
G+ EA+ + ++ K+ N++ T+ ++ GLC+ + EA Q ++ M +
Sbjct: 382 DGKSMEAVGYLKKMSKQVSCVANEE-TYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGV 440
Query: 408 VASNCVLDGLGKAGHIDRALKFFEGMEVRD----SFTYTILVHNLC 449
+ ++ GL A+ + E M +D S + L ++C
Sbjct: 441 ETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 151/390 (38%), Gaps = 37/390 (9%)
Query: 113 VLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYF 172
V+ERMKE + S++ R G + +F + E S++ L+
Sbjct: 68 VIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMV 127
Query: 173 RLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEV 232
+ + A +F+ E + N+++ LC+ A +F+ + +G P+
Sbjct: 128 KESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 233 LTYNALINGLCKARRANEARRLL----SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLE 288
+Y L+ G C + EA LL + G + + + +++ G ++ +E
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 289 ILTEMRSKGYTFDGFAYCTVVAALVKTGR--VVEADEIAEQMMSNGVEPDLASYNTMIYL 346
IL ++ KG Y + A ++ + + + + G P L SY+ M
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFN 406
F +G++ E E++ + +G + + + LC+A +L EAV ++ G
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 407 LVAS-NCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVACL 465
V N ++ GL G A+ + + M +++ C +
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAVGYLKKM-----------------SKQVSCVAN------ 404
Query: 466 QCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
+ T + ++DGL DG EA +V
Sbjct: 405 -------EETYQTLVDGLCRDGQFLEASQV 427
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 129/310 (41%), Gaps = 11/310 (3%)
Query: 45 FRIMVKGRSLSTKF--LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYC 102
FR G ++++ LN+ + +C+ + D A V + G PD ++ L+ +C
Sbjct: 139 FRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFC 198
Query: 103 RFVSFDAGCEVL----ERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIR 158
+ +L R+ + G D++ Y L+ G + + K++ ++
Sbjct: 199 LEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLK 258
Query: 159 PDVWSYNILMHCYFRLGMP--DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
Y+ + ++ + R+ + L+ P +Y+ M L + G +
Sbjct: 259 APKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAI-PCLDSYSAMATDLFEEGKLVEG 317
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH-EPNAITFTTVMN 275
+ ++ +GF P Y A + LC+A + EA ++++ GH P + ++
Sbjct: 318 EEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIK 377
Query: 276 CCFRCGRLEQGLEILTEMRSK-GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
G+ + + L +M + + Y T+V L + G+ +EA ++ E+M+
Sbjct: 378 GLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHF 437
Query: 335 PDLASYNTMI 344
P + +Y+ MI
Sbjct: 438 PGVETYHMMI 447
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 122/297 (41%), Gaps = 19/297 (6%)
Query: 45 FRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRF 104
+RI KG I + ++C A ++D A +L ++ G+ ++ + +
Sbjct: 215 WRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH--- 271
Query: 105 VSFDAGCEVLERMKEA-------GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEI 157
+++ E +ER+K G P + SY+++ + +G + M
Sbjct: 272 --WESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF 329
Query: 158 RPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNAL 217
P + Y + R G EA V ++ P+ YNV+I GLC +G A+
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAV 389
Query: 218 SMFRNLQRR-GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC 276
+ + ++ V TY L++GLC+ + EA +++ E H P T+ ++
Sbjct: 390 GYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
Query: 277 CFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD--EIAEQMMSN 331
R + + L EM S+ D +V AL ++ D EI E ++S+
Sbjct: 450 LCDMDRRYEAVMWLEEMVSQ----DMVPESSVWKALAESVCFCAIDVVEILEHLISS 502
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 7/243 (2%)
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRR--GFVPEVLTYNALINGLCKARRANEAR 252
P T +++ L K AL +F + R + Y +I+ L K+ R E +
Sbjct: 7 PRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMK 66
Query: 253 RLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAAL 312
++ +E E F +V+ R GRLE + + + ++ T++ +
Sbjct: 67 YVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEM 126
Query: 313 VKTGRVVEADEIAEQMMSNG-VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGND 371
VK + A I + V + + N ++ + + R D A ++ ++ +G D
Sbjct: 127 VKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPD 186
Query: 372 QYTHTIIIHGLCKAKRLNEAVQHLDHM----NSLGFGFNLVASNCVLDGLGKAGHIDRAL 427
+ ++ I++ G C +L EA L M + G G ++V +LD L AG +D A+
Sbjct: 187 RDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAI 246
Query: 428 KFF 430
+
Sbjct: 247 EIL 249
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 171/406 (42%), Gaps = 51/406 (12%)
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
F ++I + R + + + + E +S+++L+ V++ H+F K
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 153 IES-EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
E+ + + N+LM ++ D A++VF+++ P +Y +++ G C G
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQG-CYPDRDSYRILMKGFCLEG 201
Query: 212 YVHNA----LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEA---------------- 251
+ A SMF + ++G +++ Y L++ LC A ++A
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 252 ---------------------RRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEIL 290
+RLL+E G P +++ + F G+L +G E+L
Sbjct: 262 RCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVL 321
Query: 291 TEMRSKGYTFDGFAYCTVVAALVKTGRVVEA-DEIAEQMMSNGVEPDLASYNTMIYLYFR 349
MRSKG+ F Y V AL + G++ EA I ++MM P + YN +I
Sbjct: 322 LAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCD 381
Query: 350 QGRVDEALELVDQIEKEGP--GNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNL 407
G+ EA+ + ++ K+ N++ T+ ++ GLC+ + EA Q ++ M +
Sbjct: 382 DGKSMEAVGYLKKMSKQVSCVANEE-TYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGV 440
Query: 408 VASNCVLDGLGKAGHIDRALKFFEGMEVRD----SFTYTILVHNLC 449
+ ++ GL A+ + E M +D S + L ++C
Sbjct: 441 ETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 151/390 (38%), Gaps = 37/390 (9%)
Query: 113 VLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYF 172
V+ERMKE + S++ R G + +F + E S++ L+
Sbjct: 68 VIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMV 127
Query: 173 RLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEV 232
+ + A +F+ E + N+++ LC+ A +F+ + +G P+
Sbjct: 128 KESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 233 LTYNALINGLCKARRANEARRLL----SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLE 288
+Y L+ G C + EA LL + G + + + +++ G ++ +E
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 289 ILTEMRSKGYTFDGFAYCTVVAALVKTGR--VVEADEIAEQMMSNGVEPDLASYNTMIYL 346
IL ++ KG Y + A ++ + + + + G P L SY+ M
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFN 406
F +G++ E E++ + +G + + + LC+A +L EAV ++ G
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 407 LVAS-NCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVACL 465
V N ++ GL G A+ + + M +++ C +
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAVGYLKKM-----------------SKQVSCVAN------ 404
Query: 466 QCGFQVLKATRRAVIDGLISDGLKNEAKKV 495
+ T + ++DGL DG EA +V
Sbjct: 405 -------EETYQTLVDGLCRDGQFLEASQV 427
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 129/310 (41%), Gaps = 11/310 (3%)
Query: 45 FRIMVKGRSLSTKF--LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYC 102
FR G ++++ LN+ + +C+ + D A V + G PD ++ L+ +C
Sbjct: 139 FRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFC 198
Query: 103 RFVSFDAGCEVL----ERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIR 158
+ +L R+ + G D++ Y L+ G + + K++ ++
Sbjct: 199 LEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLK 258
Query: 159 PDVWSYNILMHCYFRLGMP--DEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNA 216
Y+ + ++ + R+ + L+ P +Y+ M L + G +
Sbjct: 259 APKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAI-PCLDSYSAMATDLFEEGKLVEG 317
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH-EPNAITFTTVMN 275
+ ++ +GF P Y A + LC+A + EA ++++ GH P + ++
Sbjct: 318 EEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIK 377
Query: 276 CCFRCGRLEQGLEILTEMRSK-GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
G+ + + L +M + + Y T+V L + G+ +EA ++ E+M+
Sbjct: 378 GLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHF 437
Query: 335 PDLASYNTMI 344
P + +Y+ MI
Sbjct: 438 PGVETYHMMI 447
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 122/297 (41%), Gaps = 19/297 (6%)
Query: 45 FRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRF 104
+RI KG I + ++C A ++D A +L ++ G+ ++ + +
Sbjct: 215 WRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH--- 271
Query: 105 VSFDAGCEVLERMKEA-------GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEI 157
+++ E +ER+K G P + SY+++ + +G + M
Sbjct: 272 --WESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF 329
Query: 158 RPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNAL 217
P + Y + R G EA V ++ P+ YNV+I GLC +G A+
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAV 389
Query: 218 SMFRNLQRR-GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC 276
+ + ++ V TY L++GLC+ + EA +++ E H P T+ ++
Sbjct: 390 GYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
Query: 277 CFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD--EIAEQMMSN 331
R + + L EM S+ D +V AL ++ D EI E ++S+
Sbjct: 450 LCDMDRRYEAVMWLEEMVSQ----DMVPESSVWKALAESVCFCAIDVVEILEHLISS 502
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 7/243 (2%)
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRR--GFVPEVLTYNALINGLCKARRANEAR 252
P T +++ L K AL +F + R + Y +I+ L K+ R E +
Sbjct: 7 PRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMK 66
Query: 253 RLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAAL 312
++ +E E F +V+ R GRLE + + + ++ T++ +
Sbjct: 67 YVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEM 126
Query: 313 VKTGRVVEADEIAEQMMSNG-VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGND 371
VK + A I + V + + N ++ + + R D A ++ ++ +G D
Sbjct: 127 VKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPD 186
Query: 372 QYTHTIIIHGLCKAKRLNEAVQHLDHM----NSLGFGFNLVASNCVLDGLGKAGHIDRAL 427
+ ++ I++ G C +L EA L M + G G ++V +LD L AG +D A+
Sbjct: 187 RDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAI 246
Query: 428 KFF 430
+
Sbjct: 247 EIL 249
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 192/458 (41%), Gaps = 30/458 (6%)
Query: 15 YPFTHPAILNHENPITSFLTQRITHSKNVTFRIMVKGRS--LSTKFLNICIASMCKAKQL 72
+PF P + ++ FL T + F K S +TK L I+ + +K
Sbjct: 64 WPFFEPGPNDLNRVLSRFLRDPETRKLSSEFYEKAKENSELRTTKHL---ISYLVSSKSW 120
Query: 73 DKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSL 132
D V D + LPD T + LI + R F +L + + + V + ++
Sbjct: 121 DLLVSVCEDLREHKALPDGQTCSNLIRSCIRDRKFRITHCLLSVFR-SDKSLAVSASDAA 179
Query: 133 MSGAVRKGLFPMTLHMFDKMIES-EIRPDVWSYNILMHCYFRLGMPDEANRV------FK 185
M G + ++ T+ +FD++ +S + P Y +M + ++G E ++V FK
Sbjct: 180 MKGFNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIG---ENHKVVELFQEFK 236
Query: 186 DVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKA 245
LS S + Y ++ + L K+G AL + ++ +G Y+ LI +A
Sbjct: 237 SQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEA 296
Query: 246 RRANEARRLLSEFREAG-----HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
R +L F+EAG +P +M R G +E LE++ MR
Sbjct: 297 REVVITEKL---FKEAGGKKLLKDPEMCLKVVLMY--VREGNMETTLEVVAAMRKAELKV 351
Query: 301 DGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
C +V K EA ++ E M E +Y I Y R + ++A L
Sbjct: 352 TDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLF 411
Query: 361 DQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKA 420
D++ K+G ++ I+ K +RL++AV+ + M G N+ N ++D G+A
Sbjct: 412 DEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRA 471
Query: 421 GHIDRALKFFEGME----VRDSFTYTILVHNLCRARRF 454
+ RA K ++ M+ + D +YT ++ R++
Sbjct: 472 MDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKEL 509
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 127/261 (48%), Gaps = 2/261 (0%)
Query: 137 VRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPS 196
VR+G TL + M ++E++ +++ + + EA +V+ + + E +
Sbjct: 329 VREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVY-EWAMKEECEAG 387
Query: 197 TATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
TY + IN C+ + A +F + ++GF V+ Y+ +++ K RR ++A RL++
Sbjct: 388 QVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMA 447
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
+ ++ G +PN + ++++ R L + +I EM+ D +Y ++++A ++
Sbjct: 448 KMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSK 507
Query: 317 RVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHT 376
+ E+ ++ N + D A M+ ++ + R+DE + L+ ++ EG D ++
Sbjct: 508 ELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYS 567
Query: 377 IIIHGLCKAKRLNEAVQHLDH 397
++ L A LN ++ L
Sbjct: 568 SALNALRDAG-LNSQIRWLQE 587
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 5/312 (1%)
Query: 112 EVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEI--RPDVWSYNILMH 169
EVLE MK+ G+ Y+ L+ +T +F + ++ P++ +LM
Sbjct: 269 EVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM- 327
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
Y R G + V + AE + ++NG K A+ ++ +
Sbjct: 328 -YVREGNMETTLEVVA-AMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECE 385
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
+TY IN C+ + N+A L E + G + + ++ +M+ + RL + +
Sbjct: 386 AGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRL 445
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
+ +M+ +G + + Y +++ + + A++I ++M V PD SY +MI Y R
Sbjct: 446 MAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNR 505
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVA 409
++ +EL + D+ I++ K R++E ++ L M G +
Sbjct: 506 SKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARL 565
Query: 410 SNCVLDGLGKAG 421
+ L+ L AG
Sbjct: 566 YSSALNALRDAG 577
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 144/327 (44%), Gaps = 1/327 (0%)
Query: 50 KGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDA 109
KG S++ ++ I + +A+++ E + + +L D ++ Y R + +
Sbjct: 277 KGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMET 336
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
EV+ M++A L ++++G ++ F + +++ ++ E +Y I ++
Sbjct: 337 TLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAIN 396
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
Y RL ++A +F D ++ D Y+ +++ K + +A+ + +++RG
Sbjct: 397 AYCRLEKYNKAEMLF-DEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCK 455
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
P + YN+LI+ +A A ++ E + A P+ +++T++++ R LE+ +E+
Sbjct: 456 PNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVEL 515
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
E R D +V KT R+ E + + M G D Y++ +
Sbjct: 516 YQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRD 575
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHT 376
G + L + + +Y++T
Sbjct: 576 AGLNSQIRWLQESFDAAQTSTSKYSNT 602
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 158/357 (44%), Gaps = 10/357 (2%)
Query: 63 IASMCKAKQ-LDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAG 121
+ S+C + Q ++ A VL + G+ D + TLI + + DA EV +M +G
Sbjct: 473 LMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSG 532
Query: 122 LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
+ ++ ++ +L+ G R G + + ++PD +N L+ + G D A
Sbjct: 533 VEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAF 592
Query: 182 RVFKDVLLSAET---DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF--VPEVLTYN 236
V + + AET DP + ++ C G V A +++ + + G PEV Y
Sbjct: 593 DVLAE--MKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV--YT 648
Query: 237 ALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
+N K+ + A + + +E P+ + F+ +++ L++ IL + +S+
Sbjct: 649 IAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQ 708
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA 356
G +Y +++ A +A E+ E++ S + P +++ N +I ++ +A
Sbjct: 709 GIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKA 768
Query: 357 LELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCV 413
+E +D+I+ G + T+++++ + + + L G NL+ C+
Sbjct: 769 MEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCI 825
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 163/393 (41%), Gaps = 9/393 (2%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
KL + P + TFN L+ + VL ++E+G+T D Y +L+S + G
Sbjct: 459 TKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKV 518
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
+F +M S + ++ ++ L+ R G +A + +L S P +N
Sbjct: 519 DAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY-GILRSKNVKPDRVVFNA 577
Query: 203 MINGLCKNGYVHNALSMFRNL--QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
+I+ ++G V A + + + P+ ++ AL+ C A + A+ + +
Sbjct: 578 LISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHK 637
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVE 320
G +T +N C + G + I +M+ K T D + ++ + E
Sbjct: 638 YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDE 697
Query: 321 ADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIH 380
A I + S G+ SY++++ +ALEL ++I+ T +I
Sbjct: 698 AFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALIT 757
Query: 381 GLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF---EGMEVRD 437
LC+ +L +A+++LD + +LG N + + ++ + + + K +G V
Sbjct: 758 ALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSP 817
Query: 438 SFTYTILVHNLCRARRF--LCASKHLVACLQCG 468
+ + +LC+ RRF CA V + G
Sbjct: 818 NLIMCRCITSLCK-RRFEKACAGGEPVVSFKSG 849
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 104/230 (45%), Gaps = 7/230 (3%)
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRA-NEARRLLSEFREAGH 263
N L ++G + + +S+ +L +R + Y+A CK +RA EA R F +
Sbjct: 408 NRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFR----FTKLIL 463
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
P TF +M+ C +E +L ++ G T D Y T++++ K+G+V E
Sbjct: 464 NPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFE 523
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
+ QM ++GVE +L ++ +I R G+V +A + + D+ +I
Sbjct: 524 VFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACG 583
Query: 384 KAKRLNEAVQHLDHMNSLGFGFNL--VASNCVLDGLGKAGHIDRALKFFE 431
++ ++ A L M + + ++ ++ AG ++RA + ++
Sbjct: 584 QSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQ 633
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 91/244 (37%), Gaps = 36/244 (14%)
Query: 36 RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFN 95
++ +K V I G + + I + S K+ D A + D + V PD V F+
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFS 683
Query: 96 TLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIES 155
LID D +L+ K G+ ISY+SLM + L +++K+
Sbjct: 684 ALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSI 743
Query: 156 EIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHN 215
++RP + +T N +I LC+ +
Sbjct: 744 KLRPTI------------------------------------STMNALITALCEGNQLPK 767
Query: 216 ALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMN 275
A+ ++ G P +TY+ L+ + + +LLS+ + G PN I + +
Sbjct: 768 AMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITS 827
Query: 276 CCFR 279
C R
Sbjct: 828 LCKR 831
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 72 LDKAECVLIDGV--KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISY 129
+ + VL G+ ++ V + VT+ +I Y + + + E+ ERM
Sbjct: 123 MSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMP--------FEL 174
Query: 130 NSLMSGAVRKGLFPMTLHMFD--KMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV 187
++ + +V G++ M D K E + + ++++M YFR+G EA +F V
Sbjct: 175 KNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRV 234
Query: 188 LLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARR 247
+N +I G +NGY +A+ F N+Q G+ P+ +T +++++ ++ R
Sbjct: 235 FAR-----DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGR 289
Query: 248 ANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLE----------------------- 284
+ R + S G E N +++ +CG LE
Sbjct: 290 LDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISC 349
Query: 285 --------QGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPD 336
+ LE+ + M S D + V+ A V G ++E +I +M + V+P+
Sbjct: 350 LAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPN 409
Query: 337 LASYNTMIYLYFRQGRVDEALELVDQI 363
+ + +I+L R G++ EA LV ++
Sbjct: 410 VKHFGCLIHLLGRSGKLKEAYRLVKEM 436
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 171/390 (43%), Gaps = 47/390 (12%)
Query: 81 DGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKG 140
+ +K GV DV+ ++LI Y + + +V + M E +V ++N+++ G + G
Sbjct: 71 ESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER----NVATWNAMIGGYMSNG 126
Query: 141 LFPMTLHMFD-------------------KMIESEIR-----------PDVWSYNILMHC 170
+ +F+ K IE E +V ++++++
Sbjct: 127 DAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGV 186
Query: 171 YFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVP 230
Y ++A + F+D+ + + +++M++G + G VH A ++F R F
Sbjct: 187 YVNNRKMEDARKFFEDI-----PEKNAFVWSLMMSGYFRIGDVHEARAIFY----RVFAR 237
Query: 231 EVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEIL 290
+++ +N LI G + +++A + G+EP+A+T +++++ C + GRL+ G E+
Sbjct: 238 DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 297
Query: 291 TEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQ 350
+ + +G + F ++ K G + A + E + V A N+MI
Sbjct: 298 SLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSV----ACCNSMISCLAIH 353
Query: 351 GRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVAS 410
G+ EALE+ +E D+ T ++ L E ++ M + N+
Sbjct: 354 GKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHF 413
Query: 411 NCVLDGLGKAGHIDRALKFFEGMEVRDSFT 440
C++ LG++G + A + + M V+ + T
Sbjct: 414 GCLIHLLGRSGKLKEAYRLVKEMHVKPNDT 443
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 25/288 (8%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D+V +NTLI Y + D + M+ G PD ++ +S++S + G + +
Sbjct: 238 DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 297
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
+ I + + N L+ Y + G + A VF+ + + S A N MI+ L
Sbjct: 298 SLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR-----SVACCNSMISCLAI 352
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
+G AL MF ++ P+ +T+ A++ E ++ SE + +PN
Sbjct: 353 HGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKH 412
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
F +++ R G+L++ ++ EM K TV+ AL+ +V E+AEQ+M
Sbjct: 413 FGCLIHLLGRSGKLKEAYRLVKEMHVKPND-------TVLGALLGACKVHMDTEMAEQVM 465
Query: 330 ----------SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEG 367
++ E LAS + + Y + + + EAL + ++EK G
Sbjct: 466 KIIETAGSITNSYSENHLASISNL-YAHTERWQTAEALRV--EMEKRG 510
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 43/272 (15%)
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
VT+NT+ID Y R D ++ ++M E D+IS+ ++++G V+KG L F +
Sbjct: 141 VTWNTMIDGYMRSGQVDNAAKMFDKMPER----DLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
M S ++PD + ++ LG V + VL S + + N +I+ C+ G
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL-SQDFKNNVRVSNSLIDLYCRCG 255
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
V A +F N+++R V+++N++I G A+E+ + +E G +P+A+TFT
Sbjct: 256 CVEFARQVFYNMEKR----TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFT 311
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
+ C G +E+GL M+ C
Sbjct: 312 GALTACSHVGLVEEGLRYFQIMK-----------CDYR---------------------- 338
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQI 363
+ P + Y ++ LY R GR+++AL+LV +
Sbjct: 339 -ISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 148/347 (42%), Gaps = 13/347 (3%)
Query: 92 VTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDK 151
V++ + I+ R + M AG+ P+ I++ +L+SG G F
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDFTSGSEALGD 93
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLL-SAETDPSTATYNVMINGLCKN 210
++ N +M +GM + R K L+ D ++ T+N MI+G ++
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
G V NA MF + R +++++ A+ING K EA E + +G +P+ +
Sbjct: 154 GQVDNAAKMFDKMPER----DLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 271 TTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS 330
+N C G L GL + + S+ + + +++ + G V E A Q+
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCV----EFARQVFY 265
Query: 331 NGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
N + + S+N++I + G E+L +++++G D T T + + E
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325
Query: 391 AVQHLDHMN-SLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVR 436
+++ M + C++D +AG ++ ALK + M ++
Sbjct: 326 GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 156/363 (42%), Gaps = 38/363 (10%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
VK G L D L+ AY + A + L KE G +V+S+ +++SG ++
Sbjct: 322 VKYGFLFDQNIRTALMVAYSKCT---AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGK 378
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
+ +F +M +RP+ ++Y++++ +P + ++ + S+
Sbjct: 379 EEAVDLFSEMKRKGVRPNEFTYSVIL-----TALPVISPSEVHAQVVKTNYERSSTVGTA 433
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+++ K G V A +F + + +++ ++A++ G + A ++ E + G
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGIDDK----DIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFA--------YCTVVAALV- 313
+PN TF++++N C +G F GFA C A L
Sbjct: 490 IKPNEFTFSSILNVC----------AATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 539
Query: 314 --KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGND 371
K G + E AE++ E DL S+N+MI Y + G+ +AL++ +++K D
Sbjct: 540 YAKKGNI----ESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Query: 372 QYTHTIIIHGLCKAKRLNEAVQHLDHM-NSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
T + A + E ++ D M ++C++D +AG +++A+K
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 655
Query: 431 EGM 433
E M
Sbjct: 656 ENM 658
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 164/365 (44%), Gaps = 20/365 (5%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
+K G L DV +L+D Y + +F G +V + MKE +V+++ +L+SG R +
Sbjct: 120 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARNSMN 175
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
L +F +M +P+ +++ + G+ +V V++ D + N
Sbjct: 176 DEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV-HTVVVKNGLDKTIPVSNS 234
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+IN K G V A +F + V V+T+N++I+G EA + R
Sbjct: 235 LINLYLKCGNVRKARILFDKTE----VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
+ +F +V+ C L ++ + G+ FD ++ A K +++A
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+ +++ G ++ S+ MI + + +EA++L +++++G +++T+++I+ L
Sbjct: 351 RLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 383 --CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFT 440
++ V ++ S G +LD K G ++ A K F G++ +D
Sbjct: 408 PVISPSEVHAQVVKTNYERSSTVG------TALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461
Query: 441 YTILV 445
++ ++
Sbjct: 462 WSAML 466
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/426 (19%), Positives = 171/426 (40%), Gaps = 85/426 (19%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
+VVT+ TLI Y R D + RM+ G P+ ++ + + +G+ L +
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
++++ + + N L++ Y + G +A +L S T+N MI+G
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKAR-----ILFDKTEVKSVVTWNSMISGYAA 272
Query: 210 NGYVHNALSMFRNLQ-----------------------------------RRGFVPEVLT 234
NG AL MF +++ + GF+ +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 235 YNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
AL+ K +A RL F+E G N +++T +++ + E+ +++ +EM+
Sbjct: 333 RTALMVAYSKCTAMLDALRL---FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389
Query: 295 SKGYTFDGFAYCTVVAAL-------------------------------VKTGRVVEADE 323
KG + F Y ++ AL VK G+V EA +
Sbjct: 390 RKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLC 383
+ S + D+ +++ M+ Y + G + A+++ ++ K G +++T + I++ +C
Sbjct: 450 V----FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN-VC 504
Query: 384 KAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGL----GKAGHIDRALKFFEGMEVRDSF 439
A N ++ + L +S CV L K G+I+ A + F+ +D
Sbjct: 505 AAT--NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV 562
Query: 440 TYTILV 445
++ ++
Sbjct: 563 SWNSMI 568
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 9/204 (4%)
Query: 163 SYNILMHCYFRLGMPDEANRVFKDV-LLSAETDPSTATYNVMING-LCKNGYVHNALSMF 220
SY L+ + R G EA R+F ++ L E D S + + ++ LC + +
Sbjct: 60 SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELF---GRQLH 116
Query: 221 RNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRC 280
+ GF+ +V +L++ K + R++ E +E N +T+TT+++ R
Sbjct: 117 CQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARN 172
Query: 281 GRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASY 340
++ L + M+++G + F + + L + G ++ ++ NG++ +
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 341 NTMIYLYFRQGRVDEALELVDQIE 364
N++I LY + G V +A L D+ E
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTE 256
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 158/368 (42%), Gaps = 15/368 (4%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
+ G D+ N+L Y S+ ++ RM+ D++S+ +++SG L
Sbjct: 324 ITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER----KDIVSWTTMISGYEYNFLP 379
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
+ + M + ++PD + ++ LG D + K + + A N
Sbjct: 380 DKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK-LAIKARLISYVIVANN 438
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+IN K + AL +F N+ R+ V+++ ++I GL R EA L + +
Sbjct: 439 LINMYSKCKCIDKALDIFHNIPRK----NVISWTSIIAGLRLNNRCFEALIFLRQMKMT- 493
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
+PNAIT T + C R G L G EI + G D F ++ V+ GR+ A
Sbjct: 494 LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTA- 552
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
N + D+ S+N ++ Y +G+ +EL D++ K D+ T ++ G
Sbjct: 553 ----WSQFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYT 442
K++ + + + + M G NL CV+D LG+AG + A KF + M V
Sbjct: 609 SKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668
Query: 443 ILVHNLCR 450
+ N CR
Sbjct: 669 GALLNACR 676
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 168/376 (44%), Gaps = 38/376 (10%)
Query: 82 GVKLG--VLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRK 139
GV+LG L V F L+DA+ V +M E L S+N L+ G ++
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAW----------YVFGKMSERNL----FSWNVLVGGYAKQ 173
Query: 140 GLFPMTLHMFDKMIE-SEIRPDVWSYNILMHCYFRL--GMPDEANRVFKDV---LLSAET 193
G F + ++ +M+ ++PDV+++ C R G+PD A K+V ++
Sbjct: 174 GYFDEAMCLYHRMLWVGGVKPDVYTFP----CVLRTCGGIPDLARG--KEVHVHVVRYGY 227
Query: 194 DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARR 253
+ N +I K G V +A +F + RR +++++NA+I+G + +E
Sbjct: 228 ELDIDVVNALITMYVKCGDVKSARLLFDRMPRR----DIISWNAMISGYFENGMCHEGLE 283
Query: 254 LLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
L R +P+ +T T+V++ C G G +I + + G+ D ++ +
Sbjct: 284 LFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL 343
Query: 314 KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQY 373
G E AE++ S D+ S+ TMI Y D+A++ ++++ D+
Sbjct: 344 NAGSWRE----AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEI 399
Query: 374 THTIIIHGLCKAKRLNEAVQ-HLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEG 432
T ++ L+ V+ H + + + +VA+N +++ K ID+AL F
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-LINMYSKCKCIDKALDIFHN 458
Query: 433 MEVRDSFTYTILVHNL 448
+ ++ ++T ++ L
Sbjct: 459 IPRKNVISWTSIIAGL 474
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 165/372 (44%), Gaps = 19/372 (5%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
K+G D+ N+L+ Y C+V M DV+S+ +++G R GL+
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMP----VRDVVSWTGIITGFTRTGLYK 189
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
L F KM ++ P++ +Y ++ R+G + ++L + S T N +
Sbjct: 190 EALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGI-HGLILKRASLISLETGNAL 245
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR-EAG 262
I+ K + +A+ +F L+++ + +++N++I+GL R+ EA L S + +G
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKK----DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG 301
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
+P+ T+V++ C G ++ G + + + G +D +V K G + A
Sbjct: 302 IKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETAL 361
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
EI + S V ++N ++ G E+L +++ K G + T ++
Sbjct: 362 EIFNGIRSKNV----FTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNAC 417
Query: 383 CKAKRLNEAVQHLDHMNSLGFGF--NLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFT 440
C ++E ++ M S + L C++D L +AG +D AL+ + M V+
Sbjct: 418 CHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVR 477
Query: 441 YTILVHNLCRAR 452
+ + C+ R
Sbjct: 478 ICGAILSACKNR 489
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 168/373 (45%), Gaps = 23/373 (6%)
Query: 86 GVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMT 145
G PD+ TF + A +F G ++ + + G D+ NSL+ G
Sbjct: 101 GFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNA 160
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+F +M +R DV S+ ++ + R G+ EA F + + +P+ ATY ++
Sbjct: 161 CKVFGEM---PVR-DVVSWTGIITGFTRTGLYKEALDTFSKM----DVEPNLATYVCVLV 212
Query: 206 GLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEP 265
+ G + + + +R + + T NALI+ K + ++A R+ E +
Sbjct: 213 SSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEK----K 268
Query: 266 NAITFTTVMNCCFRCGRLEQGLEILTEMR-SKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
+ +++ ++++ C R ++ +++ + M+ S G DG +V++A G V +
Sbjct: 269 DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWV 328
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
E +++ G++ D ++ +Y + G ++ ALE+ + I + + +T ++ GL
Sbjct: 329 HEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK----NVFTWNALLGGLAI 384
Query: 385 AKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTIL 444
E++++ + M LGF NLV L+ G +D ++F M+ R+ + L
Sbjct: 385 HGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKL 444
Query: 445 VHN------LCRA 451
H LCRA
Sbjct: 445 EHYGCMIDLLCRA 457
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 113/279 (40%), Gaps = 43/279 (15%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
+K L + T N LID Y + V +++ D +S+NS++SG V
Sbjct: 231 LKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEK----KDKVSWNSMISGLVHCERS 286
Query: 143 PMTLHMFDKM-IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYN 201
+ +F M S I+PD ++ LG D R + +L+A T
Sbjct: 287 KEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG-RWVHEYILTAGIKWDTHIGT 345
Query: 202 VMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
+++ K GY+ AL +F ++ + V T+NAL+ GL E+ R E +
Sbjct: 346 AIVDMYAKCGYIETALEIFNGIRSK----NVFTWNALLGGLAIHGHGLESLRYFEEMVKL 401
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
G +PN +TF +N C G +++G +M+S+ Y
Sbjct: 402 GFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYN---------------------- 439
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELV 360
+ P L Y MI L R G +DEALELV
Sbjct: 440 -----------LFPKLEHYGCMIDLLCRAGLLDEALELV 467
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/384 (19%), Positives = 155/384 (40%), Gaps = 21/384 (5%)
Query: 128 SYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV 187
SYN+L+S +T+ + + + PD++++ + + E ++ V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 188 L-LSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKAR 246
+ D V G+C G NA +F + R +V+++ +I G +
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVC--GESRNACKVFGEMPVR----DVVSWTGIITGFTRTG 186
Query: 247 RANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYC 306
EA L F + EPN T+ V+ R G L G I G +
Sbjct: 187 LYKEA---LDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGI------HGLILKRASLI 237
Query: 307 TVVAALVKTGRVVEADEIAEQMMSNGV--EPDLASYNTMIYLYFRQGRVDEALELVDQIE 364
++ V+ +++++ M G + D S+N+MI R EA++L ++
Sbjct: 238 SLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQ 297
Query: 365 -KEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHI 423
G D + T ++ ++ +++ + G ++ ++D K G+I
Sbjct: 298 TSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYI 357
Query: 424 DRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGL 483
+ AL+ F G+ ++ FT+ L+ L L + ++ ++ GF+ T A ++
Sbjct: 358 ETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNAC 417
Query: 484 ISDGLKNEAKKV--RLKIRKAQLL 505
GL +E ++ ++K R+ L
Sbjct: 418 CHTGLVDEGRRYFHKMKSREYNLF 441
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 172/408 (42%), Gaps = 19/408 (4%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMK---EAGLTPDVISYNSLMSGAVRKGLFPMTL 146
D VT+N LI+ Y A + M A LT ++ +++ + G +
Sbjct: 102 DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTR--VTLMTMLKLSSSNGHVSLGK 159
Query: 147 HMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMING 206
+ ++I+ + + L++ Y +G +A +VF + D +T YN ++ G
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL-----DDRNTVMYNSLMGG 214
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPN 266
L G + +AL +FR +++ + +++ A+I GL + A EA E + G + +
Sbjct: 215 LLACGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMD 269
Query: 267 AITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAE 326
F +V+ C G + +G +I + + + ++ K + A + +
Sbjct: 270 QYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFD 329
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
+M + ++ S+ M+ Y + GR +EA+++ +++ G D YT I
Sbjct: 330 RMK----QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 387 RLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVH 446
L E Q + G + SN ++ GK G ID + + F M VRD+ ++T +V
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 447 NLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLKNEAKK 494
+ R + + +Q G + T VI GL + ++
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 158/338 (46%), Gaps = 20/338 (5%)
Query: 121 GLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEA 180
G+ D +S+ +++ G + GL + F +M ++ D + + ++ LG +E
Sbjct: 230 GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
Query: 181 NRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALIN 240
++ ++ + D + +I+ CK +H A ++F ++++ V+++ A++
Sbjct: 290 KQIHACIIRTNFQD-HIYVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVSWTAMVV 344
Query: 241 GLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTF 300
G + RA EA ++ + + +G +P+ T ++ C LE+G ++ K T
Sbjct: 345 GYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG----SQFHGKAITS 400
Query: 301 DGFAYCTVVAALV----KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA 356
Y TV +LV K G + ++ + +M D S+ M+ Y + GR E
Sbjct: 401 GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVET 456
Query: 357 LELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNS-LGFGFNLVASNCVLD 415
++L D++ + G D T T +I +A + + ++ M S G ++ +C++D
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516
Query: 416 GLGKAGHIDRALKFFEGMEV-RDSFTYTILVHNLCRAR 452
++G ++ A++F GM D+ +T L+ + CR +
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLL-SACRNK 553
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 112/267 (41%), Gaps = 43/267 (16%)
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIE 154
+ LID YC+ V +RMK+ +V+S+ +++ G + G + +F M
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQ----KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 155 SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVH 214
S I PD ++ + + +E ++ + S T + N ++ K G +
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS-NSLVTLYGKCGDID 423
Query: 215 NALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVM 274
++ +F + R + +++ A+++ + RA E +L + + G +P+ +T T V+
Sbjct: 424 DSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 275 NCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVE 334
+ C R G +E+G M S+ G+
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSE----------------------------------YGIV 505
Query: 335 PDLASYNTMIYLYFRQGRVDEALELVD 361
P + Y+ MI L+ R GR++EA+ ++
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFIN 532
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 15/235 (6%)
Query: 73 DKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSL 132
++A + +D + G+ PD T I A S + G + + +GL V NSL
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSL 412
Query: 133 MSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAE 192
++ + G + +F++M +R D S+ ++ Y + G E ++F D ++
Sbjct: 413 VTLYGKCGDIDDSTRLFNEM---NVR-DAVSWTAMVSAYAQFGRAVETIQLF-DKMVQHG 467
Query: 193 TDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR-GFVPEVLTYNALINGLCKARRANEA 251
P T +I+ + G V F+ + G VP + Y+ +I+ ++ R EA
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEA 527
Query: 252 RRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG---LEILTEM---RSKGYTF 300
R ++ P+AI +TT+++ C G LE G E L E+ GYT
Sbjct: 528 MRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTL 579
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 12/201 (5%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
L I++ L++ + G++ V N+L+ Y + D + M
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
D +S+ +++S + G T+ +FDKM++ ++PD + ++ R G+ +
Sbjct: 434 ----VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 179 EANRVFKDVLLSAETD--PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYN 236
+ R FK L+++E PS Y+ MI+ ++G + A+ + F P+ + +
Sbjct: 490 KGQRYFK--LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWT 544
Query: 237 ALINGLCKARRANEARRLLSE 257
L++ C+ + E + +E
Sbjct: 545 TLLSA-CRNKGNLEIGKWAAE 564
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 11/182 (6%)
Query: 146 LHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMIN 205
+ +F +M + + + +Y L+ F+ G D A +FK+ ++S P TYN++++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKE-MVSDGVPPDIMTYNILLD 59
Query: 206 GLCKNGYVHNAL---------SMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLS 256
GLCKNG + AL +F +L +G P V+TY +I+G CK EA L
Sbjct: 60 GLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 257 EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTG 316
+ +E G P++ T+ T++ R G E++ EMRS + D Y +V ++ G
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDG 178
Query: 317 RV 318
R+
Sbjct: 179 RL 180
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 10/189 (5%)
Query: 112 EVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCY 171
E+ M + GL + ++Y +L+ G + G M +F +M+ + PD+ +YNIL+
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 172 FRLGMPDEANRVFK-----DVLLSAE---TDPSTATYNVMINGLCKNGYVHNALSMFRNL 223
+ G ++A K D+ S P+ TY MI+G CK G+ A ++FR +
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
+ G +P+ TYN LI + + L+ E R +A T+ V + GRL
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRL 180
Query: 284 EQG-LEILT 291
++G LE+L+
Sbjct: 181 DKGFLEMLS 189
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 217 LSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNC 276
+ +FR + +RG V +TY LI GL +A + A+ + E G P+ +T+ +++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 277 CFRCGRLEQ---------GLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQ 327
+ G+LE+ G ++ + KG + Y T+++ K G EA + +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTII 378
M +G PD +YNT+I + R G + EL+ ++ D T+ ++
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 33 LTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVV 92
++QR VT+ +++G + +A D A+ + + V GV PD++
Sbjct: 7 MSQRGLVGNTVTYTTLIQG--------------LFQAGDCDMAQEIFKEMVSDGVPPDIM 52
Query: 93 TFNTLIDAYCRFVSFDA---------GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
T+N L+D C+ + G ++ + G+ P+V++Y +++SG +KG
Sbjct: 53 TYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKE 112
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
+F KM E PD +YN L+ + R G
Sbjct: 113 EAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDG 144
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
+E+ EM +G + Y T++ L + G A EI ++M+S+GV PD+ +YN ++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 347 YFRQGRVDEAL---------ELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDH 397
+ G++++AL +L + +G + T+T +I G CK EA
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 398 MNSLG 402
M G
Sbjct: 121 MKEDG 125
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 149/324 (45%), Gaps = 32/324 (9%)
Query: 158 RPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM-----------ING 206
+PD+ +YN ++H Y G + + +FK+++LS S+ +++ I+G
Sbjct: 284 KPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHG 343
Query: 207 LC-KNGYVHNA------LSMFRNLQ-----RRGF--VPE--VLTYNALINGLCKARRANE 250
C K+ ++ +A +++ L R+ F PE + ++NA+I+G + +
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 251 ARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVA 310
A L E +++ PN +T T +++ C + G L G + +RS + + ++
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
K G + EA + + M + + ++NTMI Y G+ EAL + ++ G
Sbjct: 464 MYAKCGSIAEARRLFDLM----TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITP 519
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHM-NSLGFGFNLVASNCVLDGLGKAGHIDRALKF 429
T +++ A + E + + M + GF ++ C++D LG+AGH+ RAL+F
Sbjct: 520 TPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQF 579
Query: 430 FEGMEVRDSFTYTILVHNLCRARR 453
E M + + + CR +
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIHK 603
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 78/141 (55%)
Query: 225 RRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLE 284
R P +TYN++I+G CK R ++A+R+L G P+ +TF+T++N + R++
Sbjct: 3 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 62
Query: 285 QGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMI 344
G+EI EM +G + Y T++ + G + A ++ +M+S GV PD +++ M+
Sbjct: 63 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Query: 345 YLYFRQGRVDEALELVDQIEK 365
+ + +A +++ ++K
Sbjct: 123 AGLCSKKELRKAFAILEDLQK 143
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%)
Query: 195 PSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRL 254
P+T TYN MI+G CK V +A M ++ +G P+V+T++ LING CKA+R + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 255 LSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVK 314
E G N +T+TT+++ + G L+ ++L EM S G D + ++A L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 315 TGRVVEADEIAEQM 328
+ +A I E +
Sbjct: 128 KKELRKAFAILEDL 141
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 152 MIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNG 211
M+ I P +YN ++ + + D+A R+ D + S P T++ +ING CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML-DSMASKGCSPDVVTFSTLINGYCKAK 59
Query: 212 YVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
V N + +F + RRG V +TY LI+G C+ + A+ LL+E G P+ ITF
Sbjct: 60 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 119
Query: 272 TVMNCCFRCGRLEQGLEILTEMR 294
++ L + IL +++
Sbjct: 120 CMLAGLCSKKELRKAFAILEDLQ 142
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
++ + P +T+N++ID +C+ D +L+ M G +PDV+++++L++G +
Sbjct: 2 LRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRV 61
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
+ +F +M I + +Y L+H + ++G D A + + ++S P T++
Sbjct: 62 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNE-MISCGVAPDYITFHC 120
Query: 203 MINGLCKNGYVHNALSMFRNLQR 225
M+ GLC + A ++ +LQ+
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%)
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
Y +++ K RV +A + + M S G PD+ +++T+I Y + RVD +E+ +
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 363 IEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGH 422
+ + G + T+T +IHG C+ L+ A L+ M S G + + +C+L GL
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 423 IDRALKFFEGME 434
+ +A E ++
Sbjct: 131 LRKAFAILEDLQ 142
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 55 STKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVL 114
+T N I CK ++D A+ +L G PDVVTF+TLI+ YC+ D G E+
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 115 ERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILM 168
M G+ + ++Y +L+ G + G + ++MI + PD +++ ++
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKR 387
M+ + P +YN+MI + +Q RVD+A ++D + +G D T + +I+G CKAKR
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 388 LNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM----EVRDSFTYTI 443
++ ++ M+ G N V ++ G + G +D A M D T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 444 LVHNLCRARRF 454
++ LC +
Sbjct: 121 MLAGLCSKKEL 131
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 20 PAILNHENPITSFLTQ-RITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECV 78
P + + + I F Q R+ +K + + KG S + I CKAK++D +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 79 LIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVR 138
+ + G++ + VT+ TLI +C+ DA ++L M G+ PD I+++ +++G
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 139 KGLFPMTLHMFDKMIESE 156
K + + + +SE
Sbjct: 128 KKELRKAFAILEDLQKSE 145
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%)
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEI 324
P IT+ ++++ + R++ +L M SKG + D + T++ K RV EI
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 325 AEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
+M G+ + +Y T+I+ + + G +D A +L++++ G D T ++ GLC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 385 AKRLNEAVQHLDHMN 399
K L +A L+ +
Sbjct: 128 KKELRKAFAILEDLQ 142
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 374 THTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGM 433
T+ +I G CK R+++A + LD M S G ++V + +++G KA +D ++ F M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 434 EVR----DSFTYTILVHNLCRARRFLCASKHLVACLQCGFQVLKATRRAVIDGLISDGLK 489
R ++ TYT L+H C+ A L + CG T ++ GL S K
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS---K 128
Query: 490 NEAKK 494
E +K
Sbjct: 129 KELRK 133
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 179/400 (44%), Gaps = 18/400 (4%)
Query: 110 GCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMH 169
G + + R+ E DV+SYN++++G + G++ L M +M ++++PD ++ + ++
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 170 CYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFV 229
+ + + V+ D + +++ K+ + ++ +F L +
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSERVFSRL----YC 305
Query: 230 PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEI 289
+ +++N+L+ G + R NEA RL + A +P A+ F++V+ C L G ++
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 290 LTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFR 349
+ G+ + F +V K G + A +I ++M D S+ +I +
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV----LDEVSWTAIIMGHAL 421
Query: 350 QGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFN--L 407
G EA+ L ++++++G +Q ++ ++EA + + M + +G N L
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKV-YGLNQEL 480
Query: 408 VASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLVACLQC 467
V D LG+AG ++ A F M V + + + + C + L ++ + +
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI-- 538
Query: 468 GFQVLKATRRAVI---DGLISDGLKNEAKKVRLKIRKAQL 504
F V A + + S+G E K+RL++RK L
Sbjct: 539 -FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 12/222 (5%)
Query: 164 YNILMHCYFRLGMPDEANRVFKDVLLSA--ETDPSTATYNVMINGLCKNG--------YV 213
YN ++ + + G A +F+ ++ S E P+ TY+++ L G Y+
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 214 HNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH-EPNAITFTT 272
S+FR + G P+V N L+ G + N+A R+ + EPN+ T+
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
+++ GR E+L+EM+ KG+ +G +Y ++V A +G + +A + +M+ NG
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQI-EKEGPGNDQY 373
D SY T++ R+G+ DEA L++ + EK+ D Y
Sbjct: 390 RVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSY 431
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 84/149 (56%)
Query: 148 MFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGL 207
+F +M++S I PDV++ N L+ Y ++A R+F + + + +P++ TY+ +I+GL
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 208 CKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNA 267
C G NA + ++ +GFVP +YN+L+N + ++A + L E E G +
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 268 ITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
I++ T+++ R G+ ++ +L +R K
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLREK 423
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 16/254 (6%)
Query: 224 QRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRL 283
Q+ F E +Y+ I L A+ E ++++ H N + +++ + G+L
Sbjct: 164 QQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKL 223
Query: 284 EQGLEILTEM-RSKGYTFDGF--AYCTVVAALVKTGR--------VVEADEIAEQMMSNG 332
+ + I M SK Y + AL+ G + + QM+ +G
Sbjct: 224 IRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSG 283
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGP-GNDQYTHTIIIHGLCKAKRLNEA 391
+EPD+ + N ++ Y V++AL + Q+ + +T+ +IHGLC R A
Sbjct: 284 IEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINA 343
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALK----FFEGMEVRDSFTYTILVHN 447
+ L M GF N + N +++ +G ID A+K E V D +Y LV
Sbjct: 344 RELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDE 403
Query: 448 LCRARRFLCASKHL 461
CR ++ A++ L
Sbjct: 404 SCRKGKYDEATRLL 417
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 195/463 (42%), Gaps = 51/463 (11%)
Query: 69 AKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLER--MKEAGLTPDV 126
++LD + V ++ ++LG++P+ + +I A C F V MK DV
Sbjct: 145 GRELDAIK-VFVEFLELGLVPNDYCYTAVIRA-CSNSDFVGVGRVTLGFLMKTGHFESDV 202
Query: 127 ISYNSLMSGAVR-KGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFK 185
SL+ V+ + F +FDKM SE+ W+ ++ C ++G P EA R F
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKM--SELNVVTWTL-MITRC-MQMGFPREAIRFFL 258
Query: 186 DVLLSA-ETDPSTATY--------------NVMINGLCKNGYVHNA----LSMFRNLQRR 226
D++LS E+D T + + + ++G V + + M+
Sbjct: 259 DMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSAD 318
Query: 227 GFVPE------------VLTYNALINGLCK-ARRANEARRLLSEFREAGH-EPNAITFTT 272
G V + V+++ ALI G K A EA L SE GH EPN TF++
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
C G ++L + +G + +V++ VK+ R+ +A E +
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS--- 435
Query: 333 VEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAV 392
E +L SYNT + R ++A +L+ +I + G +T ++ G+ + +
Sbjct: 436 -EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Query: 393 QHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRAR 452
Q + LG N N ++ K G ID A + F ME R+ ++T ++ +
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 453 RFLCASKHLVACLQCGFQVLKATRRAVID-----GLISDGLKN 490
+ + ++ G + + T A++ GL+S+G ++
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRH 597
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 186/462 (40%), Gaps = 55/462 (11%)
Query: 86 GVLP-DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPM 144
G+ P D VTF++L+ + R F G V R+ E + PD + YNSL+S + G
Sbjct: 56 GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAK 115
Query: 145 TLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMI 204
+F+ M R DV S++ +M CY G +A +VF + L P+ Y +I
Sbjct: 116 AEDVFETMRRFGKR-DVVSWSAMMACYGNNGRELDAIKVFVE-FLELGLVPNDYCYTAVI 173
Query: 205 NGLCKNGYVHNALSMFRNLQRRG-FVPEVLTYNALINGLCKARRANE-ARRLLSEFREAG 262
+ +V L + G F +V +LI+ K + E A ++ + E
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL- 232
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
N +T+T ++ C + G + + +M G+ D F +V +A + +
Sbjct: 233 ---NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFR---QGRVDEALELVDQIEKEGPGNDQYTHTIII 379
++ + +G+ D+ +++ +Y + G VD+ ++ D++E + + T +I
Sbjct: 290 QLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMED----HSVMSWTALI 343
Query: 380 HGLCKAKRL-NEAVQHLDHMNSLG------FGF--------------------------- 405
G K L EA+ M + G F F
Sbjct: 344 TGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG 403
Query: 406 ---NLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASKHLV 462
N +N V+ K+ ++ A + FE + ++ +Y + CR F A K L
Sbjct: 404 LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLS 463
Query: 463 ACLQCGFQVLKATRRAVIDGLISDGLKNEAKKVRLKIRKAQL 504
+ V T +++ G+ + G + +++ ++ K L
Sbjct: 464 EITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 14/243 (5%)
Query: 63 IASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL 122
++ + + K E + VKLG+ + N LI Y + S D V M+
Sbjct: 481 LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME---- 536
Query: 123 TPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANR 182
+VIS+ S+++G + G L F++MIE ++P+ +Y ++ +G+ E R
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596
Query: 183 VFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
F + + P Y M++ LC+ G + +A + F +VL + + G
Sbjct: 597 HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP---FQADVLVWRTFL-GA 652
Query: 243 CKARRANEARRLLSE--FREAGHEPNA-ITFTTVMNCCFRCGRLEQGLEILTEMRSKGYT 299
C+ E +L + +EP A I + + C G+ E+ E+ +M+ +
Sbjct: 653 CRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC---AGKWEESTEMRRKMKERNLV 709
Query: 300 FDG 302
+G
Sbjct: 710 KEG 712
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 152/346 (43%), Gaps = 16/346 (4%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D+V++N LI+ Y + + V + M+ G+ PD ++ L+S G +
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
+ + E+ +R + N LM + + G EA R+F ++ + ++ MI+G +
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNL-----EKRTIVSWTTMISGYAR 335
Query: 210 NGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAIT 269
G + + +F +++ + +V+ +NA+I G +A+R +A L E + + +P+ IT
Sbjct: 336 CGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
Query: 270 FTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMM 329
++ C + G L+ G+ I + + + ++V K G + EA + +
Sbjct: 392 MIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ 451
Query: 330 SNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLN 389
+ + +Y +I G A+ +++ G D+ T ++ C +
Sbjct: 452 TR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQ 507
Query: 390 EAVQHLDHMNSLGFGFN--LVASNCVLDGLGKAGHIDRALKFFEGM 433
+ M S F N L + ++D LG+AG ++ A + E M
Sbjct: 508 TGRDYFSQMKSR-FNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 25/271 (9%)
Query: 91 VVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFD 150
+V++ T+I Y R D ++ + M+E DV+ +N+++ G+V+ L +F
Sbjct: 323 IVSWTTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQ 378
Query: 151 KMIESEIRPDVWSYNILMHCYF---RLGMPDEA---NRVFKDVLLSAETDPSTATYNVMI 204
+M S +PD + ++HC +LG D +R + LS T+ ++
Sbjct: 379 EMQTSNTKPDEIT---MIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTS----LV 431
Query: 205 NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHE 264
+ K G + ALS+F +Q R LTY A+I GL A+ A +E +AG
Sbjct: 432 DMYAKCGNISEALSVFHGIQTRN----SLTYTAIIGGLALHGDASTAISYFNEMIDAGIA 487
Query: 265 PNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFA-YCTVVAALVKTGRVVEADE 323
P+ ITF +++ C G ++ G + ++M+S+ Y +V L + G + EAD
Sbjct: 488 PDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADR 547
Query: 324 IAEQMMSNGVEPDLASYNTMIYLYFRQGRVD 354
+ E M +E D A + +++ G V+
Sbjct: 548 LMESM---PMEADAAVWGALLFGCRMHGNVE 575
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/440 (18%), Positives = 184/440 (41%), Gaps = 30/440 (6%)
Query: 18 THPAILNHENPITSFLTQ--RITHSKNVTFRIMVKGRSL----STKFLNICIASMCKAKQ 71
TH +L+ NP+ S L + + H K + ++++ G L S++ + C ++ +++
Sbjct: 47 THSFVLH--NPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFC--ALSESRY 102
Query: 72 LDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGL---TPDVIS 128
LD + +L G++ P++ ++N I + + + ++M G PD +
Sbjct: 103 LDYSVKIL-KGIEN---PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFT 158
Query: 129 YNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVL 188
Y L L + + +++ + +N +H + G + A +VF +
Sbjct: 159 YPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE-- 216
Query: 189 LSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRA 248
S D ++N +ING K G A+ +++ ++ G P+ +T L++
Sbjct: 217 -SPVRD--LVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDL 273
Query: 249 NEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTV 308
N + +E G +M+ +CG + + I + + ++ T+
Sbjct: 274 NRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV----SWTTM 329
Query: 309 VAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGP 368
++ + G + +++ ++ + E D+ +N MI + R +AL L +++
Sbjct: 330 ISGYARCGLL----DVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNT 385
Query: 369 GNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALK 428
D+ T + + L+ + ++ N+ ++D K G+I AL
Sbjct: 386 KPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALS 445
Query: 429 FFEGMEVRDSFTYTILVHNL 448
F G++ R+S TYT ++ L
Sbjct: 446 VFHGIQTRNSLTYTAIIGGL 465
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 99/260 (38%), Gaps = 11/260 (4%)
Query: 194 DPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARR 253
DP ++ + L ++ Y+ ++ + + ++ P + ++N I G ++ E+
Sbjct: 84 DPFASSRLIAFCALSESRYLDYSVKILKGIEN----PNIFSWNVTIRGFSESENPKESFL 139
Query: 254 LLSEFREAG---HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVA 310
L + G P+ T+ + C G IL + + +
Sbjct: 140 LYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIH 199
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
G + E A ++ DL S+N +I Y + G ++A+ + +E EG
Sbjct: 200 MFASCGDM----ENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKP 255
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
D T ++ LN + +++ G + N ++D K G I A + F
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 431 EGMEVRDSFTYTILVHNLCR 450
+ +E R ++T ++ R
Sbjct: 316 DNLEKRTIVSWTTMISGYAR 335
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 172/393 (43%), Gaps = 24/393 (6%)
Query: 61 ICIASMCKAKQLD----KAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLER 116
+ I +C K L + C L+ K G +++T N LID YC+ +V +
Sbjct: 10 VSILRVCTRKGLSDQGGQVHCYLL---KSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 117 MKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGM 176
M E +V+S+++LMSG V G +L +F +M I P+ ++++ + L
Sbjct: 67 MPER----NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 177 PDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYN 236
++ ++ L + N +++ K G ++ A +FR + R + ++N
Sbjct: 123 LEKGLQI-HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLI----SWN 177
Query: 237 ALINGLCKARRANEARRLLSEFREAG--HEPNAITFTTVMNCCFRCGRLEQGLEILTEMR 294
A+I G A ++A +EA P+ T T+++ C G + G +I +
Sbjct: 178 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 295 SKGYTFDGFAYCT--VVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGR 352
G+ A T +V VK G + A + +Q+ E + S++++I Y ++G
Sbjct: 238 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK----EKTMISWSSLILGYAQEGE 293
Query: 353 VDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNC 412
EA+ L ++++ D + + II L + Q L G N
Sbjct: 294 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 353
Query: 413 VLDGLGKAGHIDRALKFFEGMEVRDSFTYTILV 445
V+D K G +D A K F M+++D ++T+++
Sbjct: 354 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVI 386
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 21/293 (7%)
Query: 173 RLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEV 232
R G+ D+ +V LL + + + T N +I+ CK A +F ++ R V
Sbjct: 18 RKGLSDQGGQV-HCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER----NV 72
Query: 233 LTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTE 292
++++AL++G + L SE G PN TF+T + C LE+GL+I
Sbjct: 73 VSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGF 132
Query: 293 MRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGR 352
G+ ++V K GR+ EA+++ ++ V+ L S+N MI + G
Sbjct: 133 CLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI----VDRSLISWNAMIAGFVHAGY 188
Query: 353 VDEALELVDQIE----KEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLV 408
+AL+ ++ KE P D++T T ++ C + + A + + H + GF+
Sbjct: 189 GSKALDTFGMMQEANIKERP--DEFTLTSLLKA-CSSTGMIYAGKQI-HGFLVRSGFHCP 244
Query: 409 ASNCV----LDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCA 457
+S + +D K G++ A K F+ ++ + +++ L+ + F+ A
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEA 297
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 169/398 (42%), Gaps = 20/398 (5%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
+K G+ ++ N LID Y F +V +RM D+IS+NS++
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM----YVRDLISWNSIIKAYELNEQP 329
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
+ +F +M S I+PD + L +LG V L N
Sbjct: 330 LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
++ K G V +A ++F L +V+++N +I+G + A+EA + + E G
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPN----TDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445
Query: 263 H-EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
N T+ +V+ C + G L QG+++ + G D F ++ K GR+ +A
Sbjct: 446 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDA 505
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHG 381
+ Q+ P +NT+I + G ++A+ L ++ EG D T ++
Sbjct: 506 LSLFYQIPRVNSVP----WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Query: 382 LCKAKRLNEAVQHLDHMNS-LGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFT 440
+ ++E + M + G +L C++D G+AG ++ ALKF + M ++ +
Sbjct: 562 CSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS 621
Query: 441 YTILVHNLCRARRFL----CASKHL--VACLQCGFQVL 472
+ + CR + AS+HL V G+ VL
Sbjct: 622 IWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVL 659
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 16/244 (6%)
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFR-EA 261
++N C G V A F ++Q R +V +N +I+G +A ++E R S F +
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNR----DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
G P+ TF +V+ C + G +I G+ +D + +++ + V A
Sbjct: 148 GLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHG 381
+ ++M D+ S+N MI Y + G EAL L + + D T ++
Sbjct: 205 RILFDEMPVR----DMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSA 256
Query: 382 LCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTY 441
+A N V + G L SN ++D + G + K F+ M VRD ++
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316
Query: 442 TILV 445
++
Sbjct: 317 NSII 320
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 138/312 (44%), Gaps = 9/312 (2%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLE---RMKEAGLTPD--VISYNSLMSGAVRKGLFP 143
P++++F ++ C+ F + E LE +M++ V +N L+ +
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMK 193
Query: 144 MTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
+F+K+ S PDV + NIL+ + G A +F ++ P++ TY +
Sbjct: 194 EARSIFEKL-HSRFNPDVKTMNILLLGFKEAG-DVTATELFYHEMVKRGFKPNSVTYGIR 251
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
I+G CK AL +F ++ R F V LI+G AR +AR+L E + G
Sbjct: 252 IDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGL 311
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD- 322
P+ + +M+ +CG + ++++ EM KG D + ++ ++K+
Sbjct: 312 TPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGV 371
Query: 323 -EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHG 381
E ++M + P + ++ L+ G V+ L+L + ++G + ++
Sbjct: 372 CEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTA 431
Query: 382 LCKAKRLNEAVQ 393
LC +R N+A +
Sbjct: 432 LCARRRANDAFE 443
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 115/276 (41%), Gaps = 4/276 (1%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
NI + + C +++ +A + + + PDV T N L+ + A M
Sbjct: 179 FNILLRAFCTEREMKEARSIF-EKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
+ G P+ ++Y + G +K F L +F+ M + V L+H
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+A ++F ++ T P YN +++ L K G V A+ + + ++ +G P+ +T++++
Sbjct: 298 KARQLFDEISKRGLT-PDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSM 356
Query: 239 INGLCKARRA--NEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
G+ K++ N + +E P T +M G + GL++ M K
Sbjct: 357 FIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEK 416
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
GY G A + AL R +A E + Q + G
Sbjct: 417 GYCPHGHALELLTTALCARRRANDAFECSWQTVERG 452
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 100/264 (37%), Gaps = 46/264 (17%)
Query: 29 ITSFLTQRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVL 88
+ +F T+R F + + K +NI + +A + E + VK G
Sbjct: 183 LRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFK 242
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERM------------------------------- 117
P+ VT+ ID +C+ +F + E M
Sbjct: 243 PNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQL 302
Query: 118 ----KEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFR 173
+ GLTPD +YN+LMS ++ G + + +M E I PD ++ H F
Sbjct: 303 FDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPD----SVTFHSMF- 357
Query: 174 LGMPDEANRVFKDV------LLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRG 227
+GM F V + P T T +++ C NG V+ L +++ + +G
Sbjct: 358 IGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKG 417
Query: 228 FVPEVLTYNALINGLCKARRANEA 251
+ P L LC RRAN+A
Sbjct: 418 YCPHGHALELLTTALCARRRANDA 441
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 16/227 (7%)
Query: 235 YNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT--VMNCCF-RCGRLEQGLEILT 291
+ ++ L + R ++A L++E R+ PN ++F + ++ C + G E+ LE
Sbjct: 106 FEKTLHILARMRYFDQAWALMAEVRK--DYPNLLSFKSMSILLCKIAKFGSYEETLEAFV 163
Query: 292 EMRS----KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLY 347
+M K + D F ++ A + EA I E++ S PD+ + N ++ +
Sbjct: 164 KMEKEIFRKKFGVDEFN--ILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGF 220
Query: 348 FRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNL 407
G V ++ K G + T+ I I G CK + EA++ + M+ L F +
Sbjct: 221 KEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITV 280
Query: 408 VASNCVLDGLGKAGHIDRALKFFEGMEVR----DSFTYTILVHNLCR 450
++ G G A + +A + F+ + R D Y L+ +L +
Sbjct: 281 QILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMK 327
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 149/351 (42%), Gaps = 47/351 (13%)
Query: 56 TKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLE 115
T N+ IA + D+A V G +PD ++ +L+ A + ++ G ++
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 116 RMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLG 175
+ + G D+ NSL++ ++F+ + D S+N ++ +
Sbjct: 396 YIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN---ADSVSWNTILTACLQHE 452
Query: 176 MPDEANRVFKDVLLSAETDPSTATY----------------------------------- 200
P E R+FK ++L +E +P T
Sbjct: 453 QPVEMLRLFK-LMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIK 511
Query: 201 NVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFRE 260
N +I+ K G + A +F ++ R +V++++ LI G ++ EA L E +
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQSGFGEEALILFKEMKS 567
Query: 261 AGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCT-VVAALVKTGRVV 319
AG EPN +TF V+ C G +E+GL++ M+++ +C+ VV L + GR+
Sbjct: 568 AGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLN 627
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
EA+ ++M +EPD+ + T++ QG V A + + I K P N
Sbjct: 628 EAERFIDEM---KLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFN 675
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 187/458 (40%), Gaps = 67/458 (14%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGL- 141
+KL ++ N LI Y RF V + D+IS++S+++G + G
Sbjct: 195 IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP----MKDLISWSSIIAGFSQLGFE 250
Query: 142 FPMTLHMFD------------------KMIESEIRPDVWSY------------NILMHC- 170
F H+ + K S +RPD S N + C
Sbjct: 251 FEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCS 310
Query: 171 ----YFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
Y R G + A RVF + P TA++NV+I GL NGY A+S+F ++
Sbjct: 311 LCDMYARCGFLNSARRVFDQI-----ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
GF+P+ ++ +L+ K ++ ++ S + G + +++ C L
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
+ + R+ D ++ T++ A ++ + VE + + M+ + EPD + ++
Sbjct: 426 FNLFEDFRNNA---DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLL-- 480
Query: 347 YFRQGRVD-EALELVDQIE----KEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSL 401
+G V+ +L+L Q+ K G +Q+ +I K L +A + D M++
Sbjct: 481 ---RGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR 537
Query: 402 GFGFNLVASNCVLDGLGKAGHIDRALKFFEGME---VRDSFTYTILVHNLCRARRFLCAS 458
++V+ + ++ G ++G + AL F+ M+ + + + V C +
Sbjct: 538 ----DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEG 593
Query: 459 KHLVACLQC--GFQVLKATRRAVIDGLISDGLKNEAKK 494
L A +Q G K V+D L G NEA++
Sbjct: 594 LKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAER 631
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/364 (18%), Positives = 140/364 (38%), Gaps = 42/364 (11%)
Query: 89 PDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
PD ++N +I D V +M+ +G PD IS SL+ + + +
Sbjct: 334 PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQI 393
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
+I+ D+ N L+ Y +F+D + + ++N ++
Sbjct: 394 HSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDF----RNNADSVSWNTILTACL 449
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
++ L +F+ + P+ +T L+ G + ++ + G P
Sbjct: 450 QHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQF 509
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQM 328
+++ +CG L Q I M ++ D ++ T++ ++G EA + ++M
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQSGFGEEALILFKEM 565
Query: 329 MSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRL 388
S G+EP+ ++ ++ G V+E L+L ++ E HG+ K
Sbjct: 566 KSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTE-------------HGISPTK-- 610
Query: 389 NEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILVHNL 448
+H +CV+D L +AG ++ A +F + M++ + +
Sbjct: 611 ----EH---------------CSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651
Query: 449 CRAR 452
C+ +
Sbjct: 652 CKTQ 655
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 93/474 (19%), Positives = 175/474 (36%), Gaps = 82/474 (17%)
Query: 46 RIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPD------------VVT 93
R + +GR + LN S CK + + + G K G L D +V+
Sbjct: 81 RSLAQGRKIHDHILN----SNCKYDTILNNHILSMYG-KCGSLRDAREVFDFMPERNLVS 135
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
+ ++I Y + + +M + L PD ++ S++ + + ++I
Sbjct: 136 YTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI 195
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVF-----KDVL-------------------- 188
+ E + + N L+ Y R +A+RVF KD++
Sbjct: 196 KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255
Query: 189 ---------------------LSAETDPSTATYNVMINGLC-KNGYVHNALS-------- 218
L A + Y I+GLC K+ NA++
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315
Query: 219 ---MFRNLQRRGF----VPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFT 271
F N RR F P+ ++N +I GL A+EA + S+ R +G P+AI+
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 272 TVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSN 331
+++ + L QG++I + + G+ D +++ + + E +N
Sbjct: 376 SLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN 435
Query: 332 GVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEA 391
D S+NT++ + + E L L + D T ++ G + L
Sbjct: 436 A---DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLG 492
Query: 392 VQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILV 445
Q + G N ++D K G + +A + F+ M+ RD +++ L+
Sbjct: 493 SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 149/358 (41%), Gaps = 54/358 (15%)
Query: 149 FDKMIESEI-----RPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVM 203
F KMI + D + + L+ Y + G A +VF D+ E D +N M
Sbjct: 135 FGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDL---GEQD--LVVFNAM 189
Query: 204 INGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGH 263
I+G N AL++ ++++ G P+V+T+NALI+G R + +L G+
Sbjct: 190 ISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGY 249
Query: 264 EPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADE 323
+P+ +++T++++ + E+ + +M + G + T++ A + E
Sbjct: 250 KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKE 309
Query: 324 IAEQMMSNGVE-------------------------------PDLASYNTMIYLYFRQGR 352
I + G+E ++N+MI+ Y G
Sbjct: 310 IHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGL 369
Query: 353 VDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM--NSLGFGFNLVAS 410
D+A+EL DQ+E G D T T I+ C L + Q+L + N L
Sbjct: 370 ADKAVELFDQMEATGEKLDHLTFTAILTA-CSHAGLTDLGQNLFLLMQNKYRIVPRLEHY 428
Query: 411 NCVLDGLGKAGHIDRALKFFEGMEVR-DSFTYTILVH------NLCRARRFLCASKHL 461
C++D LG+AG + A + + M + D F + L+ N+ AR A+KHL
Sbjct: 429 ACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELAR---IAAKHL 483
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 140/316 (44%), Gaps = 12/316 (3%)
Query: 59 LNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMK 118
N I+ Q D+A ++ D LG+ PDV+T+N LI + + + E+LE M
Sbjct: 186 FNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMC 245
Query: 119 EAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPD 178
G PDV+S+ S++SG V F +M+ + P+ + L+ L
Sbjct: 246 LDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMK 305
Query: 179 EANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNAL 238
+ +++ D + +++ K G++ A+ +FR ++ V T+N++
Sbjct: 306 HGKEIHGYSVVTGLEDHGFVR-SALLDMYGKCGFISEAMILFRKTPKKTTV----TFNSM 360
Query: 239 INGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGY 298
I A++A L + G + + +TFT ++ C G + G + M++K
Sbjct: 361 IFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYR 420
Query: 299 TFDGFA-YCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDE-- 355
Y +V L + G++VEA E+ + M +EPDL + ++ G ++
Sbjct: 421 IVPRLEHYACMVDLLGRAGKLVEAYEMIKAMR---MEPDLFVWGALLAACRNHGNMELAR 477
Query: 356 -ALELVDQIEKEGPGN 370
A + + ++E E GN
Sbjct: 478 IAAKHLAELEPENSGN 493
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 135/279 (48%), Gaps = 29/279 (10%)
Query: 163 SYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRN 222
S+N ++ YF G+P EA ++F ++ ++ + ++N +++G KN + A ++F
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEM-----SERNVVSWNGLVSGYIKNRMIVEARNVFEL 104
Query: 223 LQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGR 282
+ R V+++ A++ G + EA L E N +++T + GR
Sbjct: 105 MPERN----VVSWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWTVMFGGLIDDGR 156
Query: 283 LEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNT 342
+++ ++ M K D A ++ L + GRV EA I ++M E ++ ++ T
Sbjct: 157 IDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMR----ERNVVTWTT 208
Query: 343 MIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLG 402
MI Y + RVD A +L + + P + + T ++ G + R+ +A + + M
Sbjct: 209 MITGYRQNNRVDVARKLFEVM----PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK- 263
Query: 403 FGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTY 441
++A N ++ G G+ G I +A + F+ ME RD+ T+
Sbjct: 264 ---PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATW 299
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 164/372 (44%), Gaps = 38/372 (10%)
Query: 88 LPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLH 147
+ DVV +I CR D + + M+E +V+++ ++++G + +
Sbjct: 169 VKDVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVARK 224
Query: 148 MFDKMIE-SEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMING 206
+F+ M E +E+ S+ ++ Y G ++A F+ + + P A N MI G
Sbjct: 225 LFEVMPEKTEV-----SWTSMLLGYTLSGRIEDAEEFFEVMPMK----PVIAC-NAMIVG 274
Query: 207 LCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRAN----EARRLLSEFREAG 262
+ G + A +F ++ R NA G+ KA EA L ++ ++ G
Sbjct: 275 FGEVGEISKARRVFDLMEDRD--------NATWRGMIKAYERKGFELEALDLFAQMQKQG 326
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEAD 322
P+ + ++++ C L+ G ++ + + D + ++ VK G +V+A
Sbjct: 327 VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAK 386
Query: 323 EIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGL 382
+ ++ S D+ +N++I Y G +EAL++ ++ G ++ T I+
Sbjct: 387 LVFDRFSSK----DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTAC 442
Query: 383 CKAKRLNEAVQHLDHMNSLGFGFNLVAS----NCVLDGLGKAGHIDRALKFFEGMEVRDS 438
A +L E ++ + M S F + + +C +D LG+AG +D+A++ E M ++
Sbjct: 443 SYAGKLEEGLEIFESMES---KFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPD 499
Query: 439 FTYTILVHNLCR 450
T + C+
Sbjct: 500 ATVWGALLGACK 511
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 162/381 (42%), Gaps = 54/381 (14%)
Query: 93 TFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKM 152
++N+++ Y ++ + M E +V+S+N L+SG ++ + ++F+ M
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSER----NVVSWNGLVSGYIKNRMIVEARNVFELM 105
Query: 153 IESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGY 212
E +V S+ ++ Y + GM EA +F + + + ++ VM GL +G
Sbjct: 106 PER----NVVSWTAMVKGYMQEGMVGEAESLFWRM-----PERNEVSWTVMFGGLIDDGR 156
Query: 213 VHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTT 272
+ A ++ + V +V+ +I GLC+ R +EAR + E RE N +T+TT
Sbjct: 157 IDKARKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTT 208
Query: 273 VMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNG 332
++ + R++ ++ M K ++ +++ +GR+ +A+E E M
Sbjct: 209 MITGYRQNNRVDVARKLFEVMPEKTEV----SWTSMLLGYTLSGRIEDAEEFFEVMPMKP 264
Query: 333 V---------------------------EPDLASYNTMIYLYFRQGRVDEALELVDQIEK 365
V + D A++ MI Y R+G EAL+L Q++K
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 366 EGPGNDQYTHTIIIHGLCKA-KRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHID 424
+G + I I +C L Q H+ F ++ ++ ++ K G +
Sbjct: 325 QGV-RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383
Query: 425 RALKFFEGMEVRDSFTYTILV 445
+A F+ +D + ++
Sbjct: 384 KAKLVFDRFSSKDIIMWNSII 404
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 11/248 (4%)
Query: 125 DVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSY-NILMHCYFRLGMPDEANRV 183
D ++ ++ RKG L +F +M + +RP S +IL C + + R
Sbjct: 295 DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL--QYGRQ 352
Query: 184 FKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLC 243
L+ + D +V++ K G + A +F + +++ +N++I+G
Sbjct: 353 VHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK----DIIMWNSIISGYA 408
Query: 244 KARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK-GYTFDG 302
EA ++ E +G PN +T ++ C G+LE+GLEI M SK T
Sbjct: 409 SHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTV 468
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
Y V L + G+V +A E+ E M ++PD + ++ R+D A +
Sbjct: 469 EHYSCTVDMLGRAGQVDKAMELIESMT---IKPDATVWGALLGACKTHSRLDLAEVAAKK 525
Query: 363 IEKEGPGN 370
+ + P N
Sbjct: 526 LFENEPDN 533
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 105/223 (47%), Gaps = 24/223 (10%)
Query: 239 INGLCKARRANEARRLLS--EFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSK 296
I+ L + + NEAR+ +F+ G ++ ++++ F G ++ ++ EM +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIG------SWNSIVSGYFSNGLPKEARQLFDEMSER 77
Query: 297 GYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEA 356
++ +V+ +K +VEA + E M E ++ S+ M+ Y ++G V EA
Sbjct: 78 NVV----SWNGLVSGYIKNRMIVEARNVFELM----PERNVVSWTAMVKGYMQEGMVGEA 129
Query: 357 LELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDG 416
L ++ P ++ + T++ GL R+++A + D M ++VAS ++ G
Sbjct: 130 ESLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGG 181
Query: 417 LGKAGHIDRALKFFEGMEVRDSFTYTILVHNLCRARRFLCASK 459
L + G +D A F+ M R+ T+T ++ + R A K
Sbjct: 182 LCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARK 224
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 140/319 (43%), Gaps = 20/319 (6%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
DV+++NT+++ Y +A V + M E +V S+N L+ G + G L F
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPER----NVFSWNGLIKGYAQNGRVSEVLGSF 175
Query: 150 DKMI-ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLC 208
+M+ E + P+ + +++ +LG D V K N +I+
Sbjct: 176 KRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYG 235
Query: 209 KNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
K G + A+ +F+ ++RR +++++N +INGL EA L E + +G P+ +
Sbjct: 236 KCGAIEIAMEVFKGIKRR----DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKV 291
Query: 269 TFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCT-VVAALVKTGRVVEADEIAEQ 327
TF V+ C G +E GL M + +C VV L + G + +A E +
Sbjct: 292 TFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINK 351
Query: 328 MMSNGVEPDLASYNTMIYLYFRQGRVD---EALELVDQIEKEGPGNDQYTHTIIIHGLCK 384
M V+ D + T++ +VD ALE + ++E P N + I+G
Sbjct: 352 M---PVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPAN--FVMLSNIYG--D 404
Query: 385 AKRLNEAVQHLDHMNSLGF 403
A R ++A + M GF
Sbjct: 405 AGRFDDAARLKVAMRDTGF 423
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 172/420 (40%), Gaps = 80/420 (19%)
Query: 35 QRITHSKNVTFRIMVKGRSLSTKFLNICIASMCKAKQLDKAECVLIDGVKLGVLPDVVTF 94
+ ITH+K T SL+ FL + M +K C +++ +VV +
Sbjct: 17 ELITHAKCST-------ESLNQMFLFGMLCLMGVIASANKVFCEMVE-------KNVVLW 62
Query: 95 NTLIDAYCRFVSFDAGCEVLERMKEAGLTP--DVISYNSLMSGAVRKGLFPMTLHMFDKM 152
++I+ Y +++ + L+P D++ +N+++SG + G +FD+M
Sbjct: 63 TSMINGYL------LNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM 116
Query: 153 IESEIRP--DVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKN 210
P DV S+N ++ Y +G + RVF D+ P ++ NGL K
Sbjct: 117 ------PCRDVMSWNTVLEGYANIGDMEACERVFDDM-------PERNVFS--WNGLIK- 160
Query: 211 GYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITF 270
GY N G V EVL +R++ E PN T
Sbjct: 161 GYAQN-----------GRVSEVL---------------GSFKRMVDE---GSVVPNDATM 191
Query: 271 TTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMS 330
T V++ C + G + G + + GY V AL+ A EIA ++
Sbjct: 192 TLVLSACAKLGAFDFGKWVHKYGETLGYNK---VDVNVKNALIDMYGKCGAIEIAMEVFK 248
Query: 331 NGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNE 390
DL S+NTMI G EAL L +++ G D+ T + LC K +
Sbjct: 249 GIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGV---LCACKHMGL 305
Query: 391 AVQHLDHMNSLGFGFNLVAS----NCVLDGLGKAGHIDRALKFFEGMEVR-DSFTYTILV 445
L + NS+ F+++ CV+D L +AG + +A++F M V+ D+ + L+
Sbjct: 306 VEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 117/258 (45%), Gaps = 22/258 (8%)
Query: 196 STATYNVMI--NGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARR 253
ST + N M LC G + +A +F + + V+ + ++ING + ARR
Sbjct: 25 STESLNQMFLFGMLCLMGVIASANKVFCEMVEK----NVVLWTSMINGYLLNKDLVSARR 80
Query: 254 LLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALV 313
+ + E + + + T+++ G + + + +M + D ++ TV+
Sbjct: 81 ----YFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR----DVMSWNTVLEGYA 132
Query: 314 KTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGP--GND 371
G + E E++ + E ++ S+N +I Y + GRV E L ++ EG ND
Sbjct: 133 NIGDM----EACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPND 188
Query: 372 QYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFG-FNLVASNCVLDGLGKAGHIDRALKFF 430
T T+++ K + + +LG+ ++ N ++D GK G I+ A++ F
Sbjct: 189 A-TMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVF 247
Query: 431 EGMEVRDSFTYTILVHNL 448
+G++ RD ++ +++ L
Sbjct: 248 KGIKRRDLISWNTMINGL 265
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 157/390 (40%), Gaps = 54/390 (13%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
++ G DV N +I Y + + ++ +V + M E DV+S+NS++SG + G F
Sbjct: 159 IRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSE----RDVVSWNSMISGYSQSGSF 214
Query: 143 P------------------------------------MTLHMFDKMIESEIRPDVWSYNI 166
L + KMIE+ I+ D+ N
Sbjct: 215 EDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNA 274
Query: 167 LMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRR 226
++ Y + G D A +F ++ ++ + TY +I+G +G V A+++F ++
Sbjct: 275 VIGFYAKCGSLDYARALFDEM-----SEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 227 GFVPEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQG 286
G T+NA+I+GL + E E G PN +T ++++ L+ G
Sbjct: 330 GLS----TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGG 385
Query: 287 LEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYL 346
EI G + + +++ K G ++ A+++ N + L ++ +I
Sbjct: 386 KEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLG----AQRVFDNCKDRSLIAWTAIITA 441
Query: 347 YFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHM-NSLGFGF 405
Y G D A L DQ++ G D T T ++ + + A D M
Sbjct: 442 YAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEP 501
Query: 406 NLVASNCVLDGLGKAGHIDRALKFFEGMEV 435
+ C++ L +AG + A++F M +
Sbjct: 502 GVEHYACMVSVLSRAGKLSDAMEFISKMPI 531
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 167/401 (41%), Gaps = 48/401 (11%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKE-AGLTPDVISYNSLMSGAVRKGLFPMTLHM 148
DVV++N++I Y + SF+ ++ + M + P+ ++ S+ + L +
Sbjct: 197 DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEV 256
Query: 149 FDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDV--------------------- 187
KMIE+ I+ D+ N ++ Y + G D A +F ++
Sbjct: 257 HKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLV 316
Query: 188 -----LLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGL 242
L S +T+N MI+GL +N + ++ FR + R G P +T ++L+ L
Sbjct: 317 KEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSL 376
Query: 243 CKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDG 302
+ + + + G + N T++++ + G L + + +
Sbjct: 377 TYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSL---- 432
Query: 303 FAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQ 362
A+ ++ A G A + +QM G +PD + ++ + G D A + D
Sbjct: 433 IAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDS 492
Query: 363 IEKE---GPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVAS--NCVLDGL 417
+ + PG + Y + + L +A +L++A++ + M + +A +L+G
Sbjct: 493 MLTKYDIEPGVEHYACMVSV--LSRAGKLSDAMEFISKMP-----IDPIAKVWGALLNGA 545
Query: 418 GKAGHIDRAL----KFFEGMEVRDSFTYTILVHNLCRARRF 454
G ++ A + FE ME ++ YTI+ + +A R+
Sbjct: 546 SVLGDLEIARFACDRLFE-MEPENTGNYTIMANLYTQAGRW 585
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 145/321 (45%), Gaps = 25/321 (7%)
Query: 122 LTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEAN 181
+ PD + L+S R+ F LH+FD++ +R + +SYN L+ Y M +A
Sbjct: 53 IKPDNFLASKLISFYTRQDRFRQALHVFDEIT---VR-NAFSYNALLIAYTSREMYFDAF 108
Query: 182 RVFKDVLLSA--ETD---PSTATYNVMINGL--CKNGYVHN-ALSMFRNLQRRGFVPEVL 233
+F + S+ +D P + + + ++ L C + ++ + A + + R GF +V
Sbjct: 109 SLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVF 168
Query: 234 TYNALINGLCKARRANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM 293
N +I K AR++ E E + +++ ++++ + G E ++ M
Sbjct: 169 VGNGMITYYTKCDNIESARKVFDEMS----ERDVVSWNSMISGYSQSGSFEDCKKMYKAM 224
Query: 294 RS-KGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGR 352
+ + +G +V A ++ ++ E+ ++M+ N ++ DL+ N +I Y + G
Sbjct: 225 LACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGS 284
Query: 353 VDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNC 412
+D A L D++ ++ D T+ II G + EA+ M S+G L N
Sbjct: 285 LDYARALFDEMSEK----DSVTYGAIISGYMAHGLVKEAMALFSEMESIG----LSTWNA 336
Query: 413 VLDGLGKAGHIDRALKFFEGM 433
++ GL + H + + F M
Sbjct: 337 MISGLMQNNHHEEVINSFREM 357
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/449 (19%), Positives = 189/449 (42%), Gaps = 77/449 (17%)
Query: 61 ICIASMCKAKQLDKA------ECVLIDGVKL---GVLPDVVTFNTLIDAYCRFVSFDAGC 111
+ + +C+A + +A + +L + V+L P T+ LI + + + G
Sbjct: 46 VVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGK 105
Query: 112 EVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCY 171
+V E ++ +G P ++ +N L+ + G +FD+M D+ S+N++++ Y
Sbjct: 106 KVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR----DLCSWNVMVNGY 161
Query: 172 FRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQ------- 224
+G+ +EA ++F ++ T+ + ++ M+ G K AL ++ +Q
Sbjct: 162 AEVGLLEEARKLFDEM-----TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRP 216
Query: 225 -----------------------------RRGFVPEVLTYNALINGLCKARRANEARRLL 255
R G + + +++L++ K +EAR +
Sbjct: 217 NIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIF 276
Query: 256 SEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEM-----RSKGYTFDGFAYCTVVA 310
+ E + +++T++++ F+ R +G + +E+ R YTF G
Sbjct: 277 DKIVEK----DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADL 332
Query: 311 ALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGN 370
+ G+ V M G +P + ++++ +Y + G ++ A +VD P
Sbjct: 333 TTEELGKQVHG-----YMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC----PKP 383
Query: 371 DQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFF 430
D + T +I G + + +EA+++ D + G + V VL AG +++ L+FF
Sbjct: 384 DLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF 443
Query: 431 EGMEVRDSFT-----YTILVHNLCRARRF 454
+ + + YT LV L R+ RF
Sbjct: 444 YSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 146/323 (45%), Gaps = 18/323 (5%)
Query: 83 VKLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLF 142
V+ G+ D V +++L+D Y + D + +++ E DV+S+ S++ + +
Sbjct: 245 VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK----DVVSWTSMIDRYFKSSRW 300
Query: 143 PMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNV 202
+F +++ S RP+ +++ +++ L +E + + DP + +
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADL-TTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 203 MINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARRANEARRLLSEFREAG 262
+++ K G + +A + + P+++++ +LI G + + +EA + ++G
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPK----PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Query: 263 HEPNAITFTTVMNCCFRCGRLEQGLEI---LTEMRSKGYTFDGFAYCTVVAALVKTGRVV 319
+P+ +TF V++ C G +E+GLE +TE +T D Y +V L ++GR
Sbjct: 416 TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSD--HYTCLVDLLARSGRFE 473
Query: 320 EADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIII 379
+ + +M ++P + +++ G +D A E ++ K P N T+ +
Sbjct: 474 QLKSVISEM---PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPEN-PVTYVTMA 529
Query: 380 HGLCKAKRLNEAVQHLDHMNSLG 402
+ A + E + M +G
Sbjct: 530 NIYAAAGKWEEEGKMRKRMQEIG 552
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 155/389 (39%), Gaps = 35/389 (8%)
Query: 94 FNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMFDKMI 153
N LI F++ M G+ PD +++ ++ + G + + +
Sbjct: 94 LNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATL 153
Query: 154 ESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYV 213
++ + D + L+ Y + G A +VF++ + + S +NV+ING C+ +
Sbjct: 154 KNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKE-SILIWNVLINGYCRAKDM 212
Query: 214 HNALSMFRNLQRR----------GFV---------------PE--VLTYNALINGLCKAR 246
H A ++FR++ R G+V PE V+++ LING +
Sbjct: 213 HMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTG 272
Query: 247 RANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYC 306
A E E G +PN T V++ C + G L G+ I + G D
Sbjct: 273 DYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGT 332
Query: 307 TVVAALVKTGRVVEADEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKE 366
+V K G + + A + SN D+ S+ MI + GR +A++ Q+
Sbjct: 333 ALVDMYAKCGEL----DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYS 388
Query: 367 GPGNDQYTHTIIIHGLCKAKRLNEAVQHLDHMNSLGFGFNLVASNCVL--DGLGKAGHID 424
G D+ ++ + ++ + D M L + + VL D LG+AG ++
Sbjct: 389 GEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMR-LDYAIEPTLKHYVLVVDLLGRAGKLN 447
Query: 425 RALKFFEGMEVRDSFTYTILVHNLCRARR 453
A + E M + T ++ C+A +
Sbjct: 448 EAHELVENMPINPDLTTWAALYRACKAHK 476
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 160/405 (39%), Gaps = 68/405 (16%)
Query: 90 DVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLHMF 149
D V +NT+I + + G M +G+ P +Y+ +++G + G + + +
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 150 DKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCK 209
++I S+ D+ N L+ Y G EA VF + +P+ ++N +I+G +
Sbjct: 324 ARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRI-----HNPNLVSWNSIISGCSE 378
Query: 210 NGYVHNALSMFRNLQRRGFV-PEVLTYNALINGLCKARRANEARRLLSEFREAGHEPNAI 268
NG+ A+ M+R L R P+ T++A I+ + R + L + + G+E +
Sbjct: 379 NGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVF 438
Query: 269 TFTTVMNCCF-------------------------------RCGRLEQGLEILTEMRSKG 297
TT+++ F R G E ++ EM +
Sbjct: 439 VGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREK 498
Query: 298 YTFDGFAYCTVVAA-----LVKTGRVVE--------------------------ADEIAE 326
DGF+ +V+ A +++ G V E AE
Sbjct: 499 NRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAE 558
Query: 327 QMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQYTHTIIIHGLCKAK 386
+ S PDL +N+M+ Y + G V++AL +QI + G D T+ ++
Sbjct: 559 TIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRG 618
Query: 387 RLNEAVQHLDHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFE 431
+ + M G +C+++ + KAG +D AL+ E
Sbjct: 619 STLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIE 663
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 132/351 (37%), Gaps = 77/351 (21%)
Query: 88 LPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFPMTLH 147
L D+ N L+D YC V R+ P+++S+NS++SG G +
Sbjct: 332 LADLPLDNALLDMYCSCGDMREAFYVFGRIH----NPNLVSWNSIISGCSENGFGEQAML 387
Query: 148 MFDKMIE-SEIRPDVWSYN-----------------------------------ILMHCY 171
M+ +++ S RPD ++++ L+ Y
Sbjct: 388 MYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMY 447
Query: 172 FRLGMPDEANRVF-----KDVLLSAE------------------------TDPSTATYNV 202
F+ + A +VF +DV+L E + S
Sbjct: 448 FKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLS 507
Query: 203 MINGLCKNGYVHNALSMFRNLQ-RRGFVPEVLTYNALINGLCKARRANEARRLLSEFREA 261
+ G C + + +F L R GF + AL++ K + A + S
Sbjct: 508 SVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFS----L 563
Query: 262 GHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEA 321
P+ + +++ + G +E+ L ++ G+ D Y +++AA G ++
Sbjct: 564 ASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQG 623
Query: 322 DEIAEQMMSNGVEPDLASYNTMIYLYFRQGRVDEALELVDQIEKEGPGNDQ 372
+ QM G++ Y+ M+ L + G VDEALEL IE+ PGN+Q
Sbjct: 624 KFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALEL---IEQSPPGNNQ 671
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 137/325 (42%), Gaps = 51/325 (15%)
Query: 84 KLGVLPDVVTFNTLIDAYCRFVSFDAGCEVLERMKEAGLTPDVISYNSLMSGAVRKGLFP 143
KLG V TL+ Y + ++ +V + MKE DV+ + ++ G R G
Sbjct: 430 KLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKER----DVVLWTEMIVGHSRLGNSE 485
Query: 144 MTLHMFDKMIESEIRPDVWSYNILM---------------HC------------------ 170
+ + F +M + R D +S + ++ HC
Sbjct: 486 LAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALV 545
Query: 171 --YFRLGMPDEANRVFKDVLLSAETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGF 228
Y + G + A +F S ++P +N M+ ++G V ALS F + GF
Sbjct: 546 DMYGKNGKYETAETIF-----SLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGF 600
Query: 229 VPEVLTYNALINGLCKARRAN-EARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGL 287
+P+ +TY +L+ C R + + + L ++ +E G + ++ ++N + G +++ L
Sbjct: 601 MPDAVTYLSLL-AACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEAL 659
Query: 288 EILTEMRSKGYTFDGFAYCTVVAALVKTGRVVEADEIAEQMMSNGVEP-DLASYNTMIYL 346
E++ + S + T+++A V T + AEQ++ ++P D A++ + L
Sbjct: 660 ELIEQ--SPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILK--LDPEDTATHILLSNL 715
Query: 347 YFRQGRVDEALELVDQIEKEGPGND 371
Y GR ++ E+ +I D
Sbjct: 716 YAVNGRWEDVAEMRRKIRGLASSKD 740
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 135/350 (38%), Gaps = 44/350 (12%)
Query: 130 NSLMSGAVRKGLFPMTLHMFDKMIESEIRPDVWSYNILMHCYFRLGMPDEANRVFKDVLL 189
N+L+S VR G +FDKM +V SYN L Y R PD A+ F
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHR----NVVSYNALYSAYSR--NPDFASYAFPLTTH 189
Query: 190 SA--ETDPSTATYNVMINGLCKNGYVHNALSMFRNLQRRGFVPEVLTYNALINGLCKARR 247
A P+++T+ ++ V S+ + + G+ V+ +++
Sbjct: 190 MAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGD 249
Query: 248 ANEARRLLSEFREAGHEPNAITFTTVMNCCFRCGRLEQGLEILTEMRSKGYTFDGFAYCT 307
ARR+ + + +A+ + T++ + ++E GL M G F Y
Sbjct: 250 LESARRIF----DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSI 305
Query: 308 VVAALVKTG----------RVVEADEIAEQMMSNGV---------------------EPD 336
V+ K G R++ +D +A+ + N + P+
Sbjct: 306 VLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPN 365
Query: 337 LASYNTMIYLYFRQGRVDEALELVDQIEK-EGPGNDQYTHTIIIHGLCKAKRLNEAVQHL 395
L S+N++I G ++A+ + ++ + P D+YT + I + +R
Sbjct: 366 LVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLH 425
Query: 396 DHMNSLGFGFNLVASNCVLDGLGKAGHIDRALKFFEGMEVRDSFTYTILV 445
+ LG+ ++ +L K + A K F+ M+ RD +T ++
Sbjct: 426 GQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMI 475