Miyakogusa Predicted Gene
- Lj0g3v0311949.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0311949.1 Non Chatacterized Hit- tr|K4CHC1|K4CHC1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.86,8e-19,PMD,Aminotransferase-like, plant mobile domain;
coiled-coil,NULL,CUFF.21044.1
(239 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32120.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 89 3e-18
AT1G51538.1 | Symbols: | Aminotransferase-like, plant mobile do... 82 4e-16
AT5G18510.1 | Symbols: | Aminotransferase-like, plant mobile do... 80 8e-16
AT1G50830.1 | Symbols: | Aminotransferase-like, plant mobile do... 76 2e-14
AT4G16050.1 | Symbols: | Aminotransferase-like, plant mobile do... 70 1e-12
AT1G50820.1 | Symbols: | Aminotransferase-like, plant mobile do... 68 6e-12
AT1G50790.1 | Symbols: | Plant mobile domain protein family | c... 66 2e-11
AT1G50750.1 | Symbols: | Plant mobile domain protein family | c... 63 2e-10
>AT1G32120.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Aminotransferase-like, plant mobile domain
(InterPro:IPR019557), Protein of unknown function DUF716
(InterPro:IPR006904); BEST Arabidopsis thaliana protein
match is: Aminotransferase-like, plant mobile domain
family protein (TAIR:AT1G51538.1); Has 16736 Blast hits
to 9656 proteins in 576 species: Archae - 4; Bacteria -
1182; Metazoa - 7098; Fungi - 2631; Plants - 1178;
Viruses - 174; Other Eukaryotes - 4469 (source: NCBI
BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206
Length = 1206
Score = 88.6 bits (218), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 75/130 (57%), Gaps = 14/130 (10%)
Query: 1 MERFPALQRYPQTVE----EQVLRRWAKWDGVKMVKD--KNLKSVLDSAGDCNRFLWRPY 54
+ERF ALQ Q + E + RW + G + V +N+++VLDSA + F +RPY
Sbjct: 293 LERFMALQPPGQPSQLKTGEPRIARWHHYGGGQDVYGYPENIRAVLDSAKE--SFDYRPY 350
Query: 55 ----NNSPSLKLYNEKEMWECDNPNLDYELESFDRCLRACKLVGMGCVEQYLPHRVALQF 110
NN K Y E + W P D + +F RCLR KLVG+ C+E Y PHRVALQF
Sbjct: 351 TKPVNNFRFPKFYFEDDCWVRVRP--DENIVAFGRCLRFAKLVGLDCIEPYYPHRVALQF 408
Query: 111 GLDQDIPGMV 120
G DQD+PG+V
Sbjct: 409 GYDQDVPGVV 418
>AT1G51538.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr1:19113183-19115273 FORWARD
LENGTH=696
Length = 696
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 49 FLWRPYNNSPSL----KLYNEKEMWECDNPNLDYELESFDRCLRACKLVGMGCVEQYLPH 104
F WRPY + + Y E+ MW + NLD SF RC+R +LVG+G VE Y P+
Sbjct: 307 FDWRPYTKPLQIWNPPRFYPEEAMWMTVDDNLDDGFVSFARCMRVSQLVGVGIVEDYYPN 366
Query: 105 RVALQFGLDQDIPGMVLDCNN 125
RVA+QFGL QD+PG+V D ++
Sbjct: 367 RVAMQFGLAQDLPGLVTDHSS 387
>AT5G18510.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr5:6141778-6143886 REVERSE
LENGTH=702
Length = 702
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 11/104 (10%)
Query: 21 RWAKWDGVKMVKDKNLKSVLDSAGDCNRFLWRPYN----NSPSLKLYNEKEMWECDNPNL 76
R A+WDG++ + KN+K D F WRPY N L+ Y ++ MW + ++
Sbjct: 287 RIAQWDGLQQI-SKNVKLSFDV------FEWRPYTKPLKNWNPLRFYVDEAMWLTVDDSV 339
Query: 77 DYELESFDRCLRACKLVGMGCVEQYLPHRVALQFGLDQDIPGMV 120
D SF RC++ L G G VE Y P+RVA QFGL QD+PG+V
Sbjct: 340 DDAFASFARCVKVSYLAGNGFVEDYFPYRVARQFGLSQDLPGLV 383
>AT1G50830.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr1:18835559-18837865 REVERSE
LENGTH=768
Length = 768
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 49 FLWRPY----NNSPSLKLYNEKEMWECDNPNLDYELESFDRCLRACKLVGMGCVEQYLPH 104
F WRPY NN + Y E+ +W + ++D E SF RC+ ++VG G VE Y P+
Sbjct: 332 FEWRPYTKALNNWNPFRFYLEEAIWVTVDESIDDEFASFARCVTVSQIVGDGFVEDYFPN 391
Query: 105 RVALQFGLDQDIPGM 119
RVA QFGLDQD+PG+
Sbjct: 392 RVARQFGLDQDLPGL 406
>AT4G16050.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr4:9092243-9094243 FORWARD
LENGTH=666
Length = 666
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 64/117 (54%), Gaps = 21/117 (17%)
Query: 21 RWAKWDGVKMVKDKNLKSVLDSAGDCNRFLWRPYN------NSPSLKLYNEKEMWECDNP 74
R A+W G+K + KN+ ++ F WRPY+ N P + Y E+ W +
Sbjct: 294 RIAQWSGLKQ-RFKNVGLIIFHGN----FDWRPYSEPLENWNPP--RFYVEEAKWVRIDE 346
Query: 75 NLDY------ELESFDRCLRACKLVGMGCVEQYLPHRVALQFGLDQDIPGMVLDCNN 125
+LD E SF RC+R KLVG+G VE Y P+RVA+QFGL QD+P VL N+
Sbjct: 347 SLDGDYDDDDEFVSFARCVRVSKLVGIGVVENYYPNRVAMQFGLAQDVP--VLGTNH 401
>AT1G50820.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr1:18833275-18834861 REVERSE
LENGTH=528
Length = 528
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 2 ERFPALQRYPQTVEEQVLR---RWAKWDGVKMVKDKNLKSVLDSAGDCNRFLWRPYN--- 55
ERF LQ P ++ LR R A+W +K + +S D F WRPY
Sbjct: 272 ERFRELQLKPFSL----LRGEPRLARWCDMKQSTSNAWRIFNNSKMDS--FEWRPYTKTV 325
Query: 56 -NSPSLKLYNEKEMWECDNPNLDYELESFDRCLRACKLVGMGCVEQYLPHRVALQFGLDQ 114
N + Y E+ M PNLD E SF RC++ +LVG+ VE Y P+RVA QFG+ Q
Sbjct: 326 KNWDFPRFYPERAMRVPVGPNLDDEFISFARCIKVSELVGIDSVEHYFPNRVASQFGMRQ 385
Query: 115 DI 116
D+
Sbjct: 386 DV 387
>AT1G50790.1 | Symbols: | Plant mobile domain protein family |
chr1:18824050-18826488 REVERSE LENGTH=812
Length = 812
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 2 ERFPALQRYPQTVEEQVLRRWAKWDGVKMVKDKNLKSVLDSAGDCNRFLWRPYNNSPSL- 60
ERF ALQ P + + R A W+ +K + N K +L+++ + F W PY +
Sbjct: 276 ERFRALQSKPNLLLKGE-PRLALWNDLKQ-RTSNAKRILNNS-KIDGFEWCPYTKTVKNW 332
Query: 61 ---KLYNEKEMWECDNPNLDYELESFDRCLRACKLVGMGCVEQYLPHRVALQFGLDQDI 116
+ Y EK W PN D E SF RC+ +LVG+ +E Y P+RVA QFG QD+
Sbjct: 333 DFPQFYPEKATWVTLVPNRDDEFISFARCIMVSQLVGIDSLEHYYPNRVASQFGRLQDV 391
>AT1G50750.1 | Symbols: | Plant mobile domain protein family |
chr1:18809184-18812050 REVERSE LENGTH=816
Length = 816
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 68 MWECDNPNLDYELESFDRCLRACKLVGMGCVEQYLPHRVALQFGLDQDIPGMV 120
+W +PNLD E SF RC++ +LVG+ VE Y P+RVA QFG+ QD+P V
Sbjct: 269 VWIPASPNLDVEFVSFARCIKVSQLVGIDNVEHYFPNRVASQFGMLQDVPCAV 321