Miyakogusa Predicted Gene

Lj0g3v0307759.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307759.1 tr|I0Z7Y5|I0Z7Y5_9CHLO Tocopherol cyclase
OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,40.17,2e-17,Tocopherol_cycl,Tocopherol cyclase,CUFF.20774.1
         (117 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32770.1 | Symbols: VTE1, ATSDX1 | tocopherol cyclase, chloro...   152   4e-38

>AT4G32770.1 | Symbols: VTE1, ATSDX1 | tocopherol cyclase,
           chloroplast / vitamin E deficient 1 (VTE1) / sucrose
           export defective 1 (SXD1) | chr4:15804981-15807790
           FORWARD LENGTH=488
          Length = 488

 Score =  152 bits (384), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 69/118 (58%), Positives = 94/118 (79%), Gaps = 1/118 (0%)

Query: 1   MSADNGSYLVELEAKTDDPGTPLRAPTSEAGLSQACKDTCFGILTLKIWERRYDGSKGKI 60
           ++A+N +++VELEA+T++ GTPLRAPT+E GL+ AC+D+C+G L L+IWER YDGSKGK+
Sbjct: 371 ITAENENHVVELEARTNEAGTPLRAPTTEVGLATACRDSCYGELKLQIWERLYDGSKGKV 430

Query: 61  ILDVSSDMAALEVGGGPWFSTWKGKTT-MPPVIGPALGLPVDLDGIFNAVPLFKPPGL 117
           IL+  S MAA+E+GGGPWF TWKG T+  P ++  AL +P+DL+     VP FKPPGL
Sbjct: 431 ILETKSSMAAVEIGGGPWFGTWKGDTSNTPELLKQALQVPLDLESALGLVPFFKPPGL 488