Miyakogusa Predicted Gene

Lj0g3v0292639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0292639.1 CUFF.19573.1
         (83 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G35610.1 | Symbols: XEG113 | xyloglucanase 113 | chr2:1494761...   124   9e-30

>AT2G35610.1 | Symbols: XEG113 | xyloglucanase 113 |
           chr2:14947617-14951106 REVERSE LENGTH=644
          Length = 644

 Score =  124 bits (312), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 64/80 (80%), Positives = 71/80 (88%)

Query: 3   VFSSFKDVKVIKFSSVLDAFTGFADKEREERFRNRVKRYVGIWCCVPDQDPGHIYYDMYW 62
           +FSSF DVKVIKFSS+ DAF GF+DKEREERFR RVKRYVGIWCC  ++ PGHIYYDMYW
Sbjct: 564 IFSSFDDVKVIKFSSIEDAFIGFSDKEREERFRRRVKRYVGIWCCEENKTPGHIYYDMYW 623

Query: 63  DEKPGWKAIPPQSPEEDRPP 82
           DEKPGWK +PPQ+PEED PP
Sbjct: 624 DEKPGWKPVPPQTPEEDHPP 643