Miyakogusa Predicted Gene

Lj0g3v0289179.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0289179.1 Non Chatacterized Hit- tr|B9SIS9|B9SIS9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,41.24,0.00000000000005, ,CUFF.19335.1
         (180 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42670.1 | Symbols:  | Agenet domain-containing protein | chr...    48   4e-06

>AT5G42670.1 | Symbols:  | Agenet domain-containing protein |
           chr5:17108262-17110235 FORWARD LENGTH=294
          Length = 294

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 4/79 (5%)

Query: 101 ENSERVAMNSGYNDEYPAKRMRNIRSICLNSMSSNTIEAAILDLEELVNRIRWLRNMLNL 160
           E  +R A       + P +++++  ++ LN M S +IEAA+LDLEE++ R  WL+++L  
Sbjct: 215 EEKQRGAEPKEEEKQRPTEKLKSDEALQLNIMDSESIEAAVLDLEEMIVRFEWLKDILT- 273

Query: 161 GVPLSGTKRSSWEILHHAP 179
             P S ++++SW    + P
Sbjct: 274 --PDS-SEKNSWIYEDYHP 289