Miyakogusa Predicted Gene

Lj0g3v0283369.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0283369.1 tr|G7JQI3|G7JQI3_MEDTR Allergen Gly m Bd
OS=Medicago truncatula GN=MTR_4g060780 PE=4
SV=1,61.25,6e-19,seg,NULL,CUFF.18874.1
         (96 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G28490.1 | Symbols:  | RmlC-like cupins superfamily protein |...    75   1e-14

>AT2G28490.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr2:12178812-12180983 REVERSE LENGTH=511
          Length = 511

 Score = 74.7 bits (182), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 7/79 (8%)

Query: 18  ASWSWRKLLESVLGVGDD-NKNIRDQKFTDKSPHSCNLYDRK--PDFINNYGWSVALDGS 74
           + WSWR ++ S+L + ++ NK     +  D    S N+YD+K  P F N YGWS+ALD  
Sbjct: 298 SGWSWRNIVRSILDLTEEKNKGSGSSECED----SYNIYDKKDKPSFDNKYGWSIALDYD 353

Query: 75  DYSPLKSSGIGIYHVNLKA 93
           DY PLK SGIG+Y VNL A
Sbjct: 354 DYKPLKHSGIGVYLVNLTA 372