Miyakogusa Predicted Gene

Lj0g3v0259039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0259039.1 Non Chatacterized Hit- tr|K3Y8P8|K3Y8P8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si010590,38.89,0.0000001,seg,NULL,CUFF.17053.1
         (436 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G51800.1 | Symbols:  | Protein kinase superfamily protein | c...   261   5e-70
AT2G33550.1 | Symbols:  | Homeodomain-like superfamily protein |...    51   2e-06

>AT5G51800.1 | Symbols:  | Protein kinase superfamily protein |
           chr5:21048317-21051906 FORWARD LENGTH=972
          Length = 972

 Score =  261 bits (668), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 151/312 (48%), Positives = 188/312 (60%), Gaps = 44/312 (14%)

Query: 157 GQEGNNKQEGEQ-----VHQQLRKGKYVSPVWKPNEMLWLARAWKDQYQGGSDGSTSSRA 211
           GQE  N ++ +Q        + RKGKYVSPVWKPNEMLWLARAW+ QYQ    GS S   
Sbjct: 120 GQEATNSEKQQQPKTESFQHKFRKGKYVSPVWKPNEMLWLARAWRAQYQTQGTGSGSGSV 179

Query: 212 EQQQQAEFGIGITRGKTRADKDREVADFLRRHGVNRDAKTAGTKWDNMLGEFRKVYEWER 271
           E            RGKTRA+KDREVA++L RHG+NRD+K AGTKWDNMLGEFRKVYEWE+
Sbjct: 180 E-----------GRGKTRAEKDREVAEYLNRHGINRDSKIAGTKWDNMLGEFRKVYEWEK 228

Query: 272 GGERDHIGKSYFRLSPYERKLHRLPASFDEEVFEELSQFMGSRMRSSTHGR--------- 322
            G++D  GKSYFRLSPYERK HRLPASFDEEV++EL+ FMG R+R+ T  R         
Sbjct: 229 CGDQDKYGKSYFRLSPYERKQHRLPASFDEEVYQELALFMGPRVRAPTINRGGGGGATVT 288

Query: 323 -AGSSFGDEAXXXXXXXXXXXFK-----EDEMTPFSGRTKQISMTSGGDQ---AFFHGH- 372
            A +    EA            +     E+   P  GR K+++++  GD     + + H 
Sbjct: 289 VASTPPSVEALPPPLYPALMTSRDEYDIENNPIPSIGRGKRLALSLVGDDHHPQYPYAHN 348

Query: 373 --RGSSFLGLDTLLD------IXXXXXXXXCKELRRIGKIRMTWEESVSLWGEEGEIHRG 424
             RGS      +L +                ++LRRIGKIR+TWEESV+LW  EGE+  G
Sbjct: 349 IARGSGLFSNKSLYNPFFEMIPSSSSSSSSLRDLRRIGKIRLTWEESVNLWA-EGEVDYG 407

Query: 425 RVRLQGLSFLNA 436
           R+R+ G SFLNA
Sbjct: 408 RIRVSGSSFLNA 419


>AT2G33550.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr2:14210180-14211487 REVERSE LENGTH=314
          Length = 314

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 2/70 (2%)

Query: 236 VADFLRRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGERDHIGKSYFRLSPYERKLHRL 295
           V+ + +RHGVNR       +W N+ G+++K+ EWE   + +   +SY+ +    R+  +L
Sbjct: 80  VSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIKEET--ESYWVMRNDVRREKKL 137

Query: 296 PASFDEEVFE 305
           P  FD+EV++
Sbjct: 138 PGFFDKEVYD 147