Miyakogusa Predicted Gene
- Lj0g3v0258129.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0258129.1 Non Chatacterized Hit- tr|I1L502|I1L502_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,44.55,5e-18,JUMONJI
DOMAIN CONTAINING PROTEIN,NULL; Clavaminate synthase-like,NULL; Small
domain found in the ju,gene.g20120.t1.1
(349 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G46910.1 | Symbols: | Transcription factor jumonji (jmj) fam... 223 1e-58
AT1G63490.1 | Symbols: | transcription factor jumonji (jmjC) do... 101 9e-22
AT5G04240.1 | Symbols: ELF6 | Zinc finger (C2H2 type) family pro... 96 5e-20
AT4G20400.2 | Symbols: JMJ14, PKDM7B | JUMONJI 14 | chr4:1100975... 87 2e-17
AT4G20400.1 | Symbols: JMJ14, PKDM7B | JUMONJI 14 | chr4:1100900... 87 2e-17
AT3G48430.1 | Symbols: REF6 | relative of early flowering 6 | ch... 87 2e-17
AT2G34880.1 | Symbols: MEE27, PKDM7C | Transcription factor jumo... 85 6e-17
AT1G08620.2 | Symbols: PKDM7D | Transcription factor jumonji (jm... 83 2e-16
AT1G08620.1 | Symbols: PKDM7D | Transcription factor jumonji (jm... 83 2e-16
AT1G30810.2 | Symbols: | Transcription factor jumonji (jmj) fam... 82 8e-16
AT1G30810.1 | Symbols: | Transcription factor jumonji (jmj) fam... 82 8e-16
AT2G38950.1 | Symbols: | Transcription factor jumonji (jmj) fam... 67 1e-11
>AT5G46910.1 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr5:19046888-19050880 FORWARD LENGTH=787
Length = 787
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/194 (53%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Query: 151 WNLKILTKHGEDGVFHFLAHKTTMFPPNVLLQHDVTVYKAVQKPGEFVITFPRAYHAGFS 210
+N IL+ +GEDG F L KTT+FPP LL H+V VYKAVQKPGEFV+TFPRAYHAGFS
Sbjct: 333 YNDDILSTNGEDGAFDVLLGKTTIFPPKTLLDHNVPVYKAVQKPGEFVVTFPRAYHAGFS 392
Query: 211 HGFNCGEAVNFAIADWFPLGAAASKRYAHLRMLPIIPYEELLCKEAMVVYKYSRARGSKN 270
HGFNCGEAVNFA+ DWFP GA AS RYAHL +P++P+EEL+CKEAM++ S++
Sbjct: 393 HGFNCGEAVNFAMGDWFPFGAIASCRYAHLNRVPLLPHEELICKEAMLLNSSSKSENLDL 452
Query: 271 KPEDIASYGAIVHSFLQLMQF-YXXXXXXXXXXXXXXXXXYTSGTLICSLCHKDCYVAYL 329
P +++ +I +F+ L++F + T GT++CSLC +DCY+A++
Sbjct: 453 TPTELSGQRSIKTAFVHLIRFLHLARWSLMKSGLCTGLVSNTYGTIVCSLCKRDCYLAFI 512
Query: 330 ECKYCYSHPICLYH 343
C+ CYSHP+CL H
Sbjct: 513 NCE-CYSHPVCLRH 525
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 113/179 (63%), Gaps = 21/179 (11%)
Query: 1 MVDKSSTFDLADTTWISKIPECPVYHPSEQEFEHPLVYLQKIAPEASKYGICKIVSPIAA 60
M +K + D W ++PECPVY P+++EFE PL YLQKI PEASKYGICKIVSP+ A
Sbjct: 82 MKEKVEKLETDDLKWTERLPECPVYRPTKEEFEDPLTYLQKIFPEASKYGICKIVSPLTA 141
Query: 61 SNPAAFVLTKEEKDFKFETNVQPLRLSKWNAKDIITFPMRGSS----------------E 104
+ PA VL KE+ +FKF T VQPLRL++W++ D +TF M G +
Sbjct: 142 TVPAGAVLMKEKSNFKFTTRVQPLRLAEWDSDDKVTFFMSGRTYTFRDYEKMANKVFARR 201
Query: 105 CCS-----SSYVENEFWHDMVHGDRGTVEYGVNVEGSAFSSDPNDRLGTSKWNLKILTK 158
CS S++E EFW ++ G TVEY +V+GSAFSS P D LG+SKWNL +++
Sbjct: 202 YCSGGSLPDSFLEKEFWKEIACGKTETVEYACDVDGSAFSSAPGDPLGSSKWNLNKVSR 260
>AT1G63490.1 | Symbols: | transcription factor jumonji (jmjC)
domain-containing protein | chr1:23544938-23551946
REVERSE LENGTH=1116
Length = 1116
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 58/92 (63%)
Query: 162 DGVFHFLAHKTTMFPPNVLLQHDVTVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNF 221
D L TM P VL ++ V VY +Q+PG FVITFP+++HAGF+ G NC EAVNF
Sbjct: 123 DAQPDLLFQLVTMLSPTVLQENKVPVYTVLQEPGNFVITFPKSFHAGFNFGLNCAEAVNF 182
Query: 222 AIADWFPLGAAASKRYAHLRMLPIIPYEELLC 253
A ADW P G + ++ Y R +I +EELLC
Sbjct: 183 ATADWLPYGGSGAELYRLYRKPSVISHEELLC 214
>AT5G04240.1 | Symbols: ELF6 | Zinc finger (C2H2 type) family
protein / transcription factor jumonji (jmj) family
protein | chr5:1169544-1174638 FORWARD LENGTH=1340
Length = 1340
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%)
Query: 168 LAHKTTMFPPNVLLQHDVTVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIADWF 227
L KTT+ P +++ + + VQ PGEFV+TFPR+YH GFSHGFNCGEA NF W
Sbjct: 358 LGEKTTLVSPEMIVASGIPCCRLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWL 417
Query: 228 PLGAAASKRYAHLRMLPIIPYEELL 252
+ A+ R A + LP++ +++LL
Sbjct: 418 NVAKEAAVRRAAMNYLPMLSHQQLL 442
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 14 TWISKIPECPVYHPSEQEFEHPLVYLQKIAPEASKYGICKIVSPI 58
W+ +P PV+ P++ EF P+ Y+ KI EAS +GICKI+ P+
Sbjct: 8 NWLKALPLAPVFRPTDTEFADPIAYISKIEKEASAFGICKIIPPL 52
>AT4G20400.2 | Symbols: JMJ14, PKDM7B | JUMONJI 14 |
chr4:11009753-11013588 FORWARD LENGTH=897
Length = 897
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 82/190 (43%), Gaps = 11/190 (5%)
Query: 167 FLAHKTTMFPPNVLLQHDVTVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIADW 226
L T P +L + V VY+AVQ+ GEF++TFP+AYH+GF+ GFNC EAVN A DW
Sbjct: 301 LLHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFNCGFNCAEAVNVAPVDW 360
Query: 227 FPLGAAASKRYAHLRMLPIIPYEELLCKEAM-VVYKYSRARGSKNKPEDIASYGAI---- 281
G A + Y+ R + +++LL AM Y SK K IA + +
Sbjct: 361 LVHGQNAVEGYSKQRRKSSLSHDKLLLGAAMEATYCLWELSLSKKKTPVIARWKRVCSED 420
Query: 282 ------VHSFLQLMQFYXXXXXXXXXXXXXXXXXYTSGTLICSLCHKDCYVAYLECKYCY 335
V +Q+ + C LC D +++ CK
Sbjct: 421 GLLTKAVKKRVQMEEERLNHLQDGFSLRKMEGDFDNKRERECFLCFYDLHMSASSCKCSP 480
Query: 336 SHPICLYHGK 345
+ CL H K
Sbjct: 481 NRFACLIHAK 490
>AT4G20400.1 | Symbols: JMJ14, PKDM7B | JUMONJI 14 |
chr4:11009004-11013588 FORWARD LENGTH=954
Length = 954
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 82/190 (43%), Gaps = 11/190 (5%)
Query: 167 FLAHKTTMFPPNVLLQHDVTVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIADW 226
L T P +L + V VY+AVQ+ GEF++TFP+AYH+GF+ GFNC EAVN A DW
Sbjct: 358 LLHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFNCGFNCAEAVNVAPVDW 417
Query: 227 FPLGAAASKRYAHLRMLPIIPYEELLCKEAM-VVYKYSRARGSKNKPEDIASYGAI---- 281
G A + Y+ R + +++LL AM Y SK K IA + +
Sbjct: 418 LVHGQNAVEGYSKQRRKSSLSHDKLLLGAAMEATYCLWELSLSKKKTPVIARWKRVCSED 477
Query: 282 ------VHSFLQLMQFYXXXXXXXXXXXXXXXXXYTSGTLICSLCHKDCYVAYLECKYCY 335
V +Q+ + C LC D +++ CK
Sbjct: 478 GLLTKAVKKRVQMEEERLNHLQDGFSLRKMEGDFDNKRERECFLCFYDLHMSASSCKCSP 537
Query: 336 SHPICLYHGK 345
+ CL H K
Sbjct: 538 NRFACLIHAK 547
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%)
Query: 19 IPECPVYHPSEQEFEHPLVYLQKIAPEASKYGICKIVSPIAASNPAAFVLTKEEKDFKFE 78
+ + P+++P+ ++F+ PL Y++K+ +A YGIC+IV P+A P K ++ KF
Sbjct: 53 VDDAPIFYPTNEDFDDPLGYIEKLRSKAESYGICRIVPPVAWRPPCPLKEKKIWENSKFP 112
Query: 79 TNVQPLRL 86
T +Q + L
Sbjct: 113 TRIQFIDL 120
>AT3G48430.1 | Symbols: REF6 | relative of early flowering 6 |
chr3:17935609-17940456 FORWARD LENGTH=1360
Length = 1360
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%)
Query: 164 VFHFLAHKTTMFPPNVLLQHDVTVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAI 223
F L KTT+ P V ++ + + VQ PGEFV+TFP AYH+GFSHGFN GEA N A
Sbjct: 295 TFSTLGEKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIAT 354
Query: 224 ADWFPLGAAASKRYAHLRMLPIIPYEELL 252
+W + A+ R A + P++ + +LL
Sbjct: 355 PEWLRMAKDAAIRRAAINYPPMVSHLQLL 383
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 15 WISKIPECPVYHPSEQEFEHPLVYLQKIAPEASKYGICKI 54
W+ +P P + P+ EF+ P+ Y+ KI EAS+YGICKI
Sbjct: 13 WLKSLPVAPEFRPTLAEFQDPIAYILKIEEEASRYGICKI 52
>AT2G34880.1 | Symbols: MEE27, PKDM7C | Transcription factor jumonji
(jmj) family protein / zinc finger (C5HC2 type) family
protein | chr2:14711880-14716634 REVERSE LENGTH=806
Length = 806
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 56/104 (53%)
Query: 167 FLAHKTTMFPPNVLLQHDVTVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIADW 226
L T F P +L V VY+AVQ GE+V+TFPRAYH+GF+ GFNC EAVN A DW
Sbjct: 356 LLHELVTQFSPTILKNEGVPVYRAVQNAGEYVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 415
Query: 227 FPLGAAASKRYAHLRMLPIIPYEELLCKEAMVVYKYSRARGSKN 270
G A + Y+ + ++++L A K A G N
Sbjct: 416 LAHGQNAVEIYSQETRKTSLSHDKILLGAAFEAVKSLSAHGEDN 459
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 19 IPECPVYHPSEQEFEHPLVYLQKIAPEASKYGICKIVSPIAASNPAAFVLTKEEKDFKFE 78
I E PV+HP+ +EFE L Y++KI P A +GIC+IV P S P K+ F
Sbjct: 58 IGEAPVFHPTSEEFEDTLAYIEKIRPLAESFGICRIVPPSNWSPPCRLKGDSIWKNKNFP 117
Query: 79 TNVQPLRL 86
T VQ + L
Sbjct: 118 TRVQFVDL 125
>AT1G08620.2 | Symbols: PKDM7D | Transcription factor jumonji (jmj)
family protein / zinc finger (C5HC2 type) family protein
| chr1:2737554-2743370 FORWARD LENGTH=1209
Length = 1209
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 168 LAHK-TTMFPPNVLLQHDVTVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIADW 226
L HK T P+ L V V++ VQ GEFV+TFPRAYHAGF+ GFNC EAVN A DW
Sbjct: 456 LLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNSGFNCAEAVNVAPVDW 515
Query: 227 FPLGAAASKRYAHLRMLPIIPYEELLCKEAMVVYK 261
P G A + Y I +++LL A V K
Sbjct: 516 LPHGQIAIELYCQQGRKTSISHDKLLLGAAREVVK 550
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%)
Query: 19 IPECPVYHPSEQEFEHPLVYLQKIAPEASKYGICKIVSPIAASNPAAFVLTKEEKDFKFE 78
+ + PV++PSE+EFE L Y+ KI PEA KYGIC+IV P + P + + KF
Sbjct: 143 LEDAPVFYPSEEEFEDTLNYIAKIRPEAEKYGICRIVPPPSWKPPCPLKEKQVWEGSKFT 202
Query: 79 TNVQ 82
T VQ
Sbjct: 203 TRVQ 206
>AT1G08620.1 | Symbols: PKDM7D | Transcription factor jumonji (jmj)
family protein / zinc finger (C5HC2 type) family protein
| chr1:2737554-2743370 FORWARD LENGTH=1209
Length = 1209
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 168 LAHK-TTMFPPNVLLQHDVTVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIADW 226
L HK T P+ L V V++ VQ GEFV+TFPRAYHAGF+ GFNC EAVN A DW
Sbjct: 456 LLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNSGFNCAEAVNVAPVDW 515
Query: 227 FPLGAAASKRYAHLRMLPIIPYEELLCKEAMVVYK 261
P G A + Y I +++LL A V K
Sbjct: 516 LPHGQIAIELYCQQGRKTSISHDKLLLGAAREVVK 550
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%)
Query: 19 IPECPVYHPSEQEFEHPLVYLQKIAPEASKYGICKIVSPIAASNPAAFVLTKEEKDFKFE 78
+ + PV++PSE+EFE L Y+ KI PEA KYGIC+IV P + P + + KF
Sbjct: 143 LEDAPVFYPSEEEFEDTLNYIAKIRPEAEKYGICRIVPPPSWKPPCPLKEKQVWEGSKFT 202
Query: 79 TNVQ 82
T VQ
Sbjct: 203 TRVQ 206
>AT1G30810.2 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr1:10938139-10941505 REVERSE LENGTH=819
Length = 819
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 172 TTMFPPNVLLQHDVTVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIADWFPLGA 231
T F P++L V Y+ VQ GE+V+TFPRAYHAGF+ GFNC EAVN A DW G
Sbjct: 361 VTQFSPSILKDEGVQAYRVVQNSGEYVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLAHGQ 420
Query: 232 AASKRYAHLRMLPIIPYEELLCKEA----MVVYKYSRARGSKN 270
A + Y+ + +++LL A +++ S + G +N
Sbjct: 421 NAVELYSKETRKTSLSHDKLLLGAAYEAVKALWELSASEGKEN 463
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 19 IPECPVYHPSEQEFEHPLVYLQKIAPEASKYGICKIVSPIAASNPAAFVLTKEEKDFKFE 78
I + PV+ PS +EF PL Y++KI P A YGIC+I+ P P + KF
Sbjct: 56 INDAPVFTPSLEEFVDPLAYIEKIRPLAEPYGICRIIPPSTWKPPCRLKEKSIWEQTKFP 115
Query: 79 TNVQPLRL 86
T +Q + L
Sbjct: 116 TRIQTVDL 123
>AT1G30810.1 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr1:10938139-10941505 REVERSE LENGTH=819
Length = 819
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 172 TTMFPPNVLLQHDVTVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIADWFPLGA 231
T F P++L V Y+ VQ GE+V+TFPRAYHAGF+ GFNC EAVN A DW G
Sbjct: 361 VTQFSPSILKDEGVQAYRVVQNSGEYVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLAHGQ 420
Query: 232 AASKRYAHLRMLPIIPYEELLCKEA----MVVYKYSRARGSKN 270
A + Y+ + +++LL A +++ S + G +N
Sbjct: 421 NAVELYSKETRKTSLSHDKLLLGAAYEAVKALWELSASEGKEN 463
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 19 IPECPVYHPSEQEFEHPLVYLQKIAPEASKYGICKIVSPIAASNPAAFVLTKEEKDFKFE 78
I + PV+ PS +EF PL Y++KI P A YGIC+I+ P P + KF
Sbjct: 56 INDAPVFTPSLEEFVDPLAYIEKIRPLAEPYGICRIIPPSTWKPPCRLKEKSIWEQTKFP 115
Query: 79 TNVQPLRL 86
T +Q + L
Sbjct: 116 TRIQTVDL 123
>AT2G38950.1 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr2:16261599-16265044 FORWARD LENGTH=708
Length = 708
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 73/186 (39%), Gaps = 15/186 (8%)
Query: 174 MFPPNVLLQHDVTVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIADWFPLGAAA 233
M P L + V + VQ PG++VI FP +Y++ F GFNC E NFA DW P G A
Sbjct: 390 MMSPYQLSVEGIPVTRCVQHPGQYVIIFPGSYYSAFDCGFNCLEKANFAPLDWLPHGDIA 449
Query: 234 SKRYAHLRMLPIIPYEELLCKEAMVVYKYSRARGSKNKPEDIASY-------------GA 280
+ + +I Y++LL A K + G K + A Y
Sbjct: 450 VQVNQEMSKTSLISYDKLLFSAAREAVKCLKEYGLSKK--NTACYTRWNDSCGTDGLFSN 507
Query: 281 IVHSFLQLMQFYXXXXXXXXXXXXXXXXXYTSGTLICSLCHKDCYVAYLECKYCYSHPIC 340
I+ S ++L + C +C D Y++ + C + C
Sbjct: 508 IIKSRIKLEKNRREFLISSLESQRMDKSYDAVNKRECCVCLGDLYLSAVNCSCSANRYSC 567
Query: 341 LYHGKR 346
L H ++
Sbjct: 568 LNHMRK 573