Miyakogusa Predicted Gene

Lj0g3v0237279.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0237279.1 Non Chatacterized Hit- tr|J3MXE3|J3MXE3_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB09G1,46.36,5e-17,
,CUFF.15565.1
         (153 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47610.1 | Symbols:  | transcription regulators;zinc ion bind...   114   2e-26

>AT3G47610.1 | Symbols:  | transcription regulators;zinc ion binding
           | chr3:17549178-17551204 FORWARD LENGTH=408
          Length = 408

 Score =  114 bits (286), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/112 (54%), Positives = 82/112 (73%), Gaps = 8/112 (7%)

Query: 3   SAGEWLEKALVELCSKIETGLGLGLDEEIIKGLVSYCNLAEPRDAKEYLDNIIGQEAGKA 62
           + G+WLE+ALV+LC K ETGL    D ++I GLVSYC+LA+P DAKEYLDNIIG+E GK+
Sbjct: 4   AVGQWLEEALVDLCRKPETGLNF--DRDVISGLVSYCDLAQPVDAKEYLDNIIGKE-GKS 60

Query: 63  VIEEYLQKRGYSESS---ASSNVPTTKLSAYVKPSSADISAIGSKKSNRAPK 111
           +I EYLQ+RGY + S   A+S+ P  +L  YVKP   + ++ G+KK  + PK
Sbjct: 61  IIAEYLQRRGYKDPSSHVAASSGP--ELQMYVKPKVDNGASSGTKKPFKTPK 110